Madeline A. Crosby - Publications

FlyBase Harvard University, Cambridge, MA, United States 

22 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Gramates LS, Agapite J, Attrill H, Calvi BR, Crosby MA, Dos Santos G, Goodman JL, Goutte-Gattat D, Jenkins VK, Kaufman T, Larkin A, Matthews BB, Millburn G, Strelets VB. FlyBase: A guided tour of highlighted features. Genetics. PMID 35266522 DOI: 10.1093/genetics/iyac035  0.584
2017 Marygold S, Bello S, Bradford Y, Crosby M, Engel S, Kishore R, Laulederkind S, Shimoyama M, Smith C. Defining standards for the annotation and integration of disease relevant data across the model organism databases of the Alliance of Genome Resources (AGR) F1000research. 6. DOI: 10.7490/F1000Research.1113860.1  0.48
2017 Dos-Santos G, Falls K, Tabone C, Emmert D, Millburn G, Costa M, Crosby M. Building a comprehensive catalog of Drosophila datasets at FlyBase F1000research. 6. DOI: 10.7490/F1000Research.1113842.1  0.318
2016 Marygold SJ, Antonazzo G, Attrill H, Costa M, Crosby MA, Dos Santos G, Goodman JL, Gramates LS, Matthews BB, Rey AJ, Thurmond J. Exploring FlyBase Data Using QuickSearch. Current Protocols in Bioinformatics. 56: 1.31.1-1.31.23. PMID 27930807 DOI: 10.1002/cpbi.19  0.669
2016 Gramates LS, Marygold SJ, Santos GD, Urbano JM, Antonazzo G, Matthews BB, Rey AJ, Tabone CJ, Crosby MA, Emmert DB, Falls K, Goodman JL, Hu Y, Ponting L, Schroeder AJ, et al. FlyBase at 25: looking to the future. Nucleic Acids Research. PMID 27799470 DOI: 10.1093/Nar/Gkw1016  0.658
2016 Marygold SJ, Crosby MA, Goodman JL. Using FlyBase, a Database of Drosophila Genes and Genomes. Methods in Molecular Biology (Clifton, N.J.). 1478: 1-31. PMID 27730573 DOI: 10.1007/978-1-4939-6371-3_1  0.554
2016 Millburn GH, Crosby MA, Gramates LS, Tweedie S. FlyBase portals to human disease research using Drosophila models. Disease Models & Mechanisms. 9: 245-52. PMID 26935103 DOI: 10.1242/dmm.023317  0.365
2015 Matthews BB, Dos Santos G, Crosby MA, Emmert DB, St Pierre SE, Gramates LS, Zhou P, Schroeder AJ, Falls K, Russo SM, Gelbart WM. Gene Model Annotations for Drosophila melanogaster: Impact of High-Throughput Data. G3 (Bethesda, Md.). PMID 26109357 DOI: 10.1534/G3.115.018929  0.699
2015 Crosby MA, Gramates LS, Dos Santos G, Matthews BB, St Pierre SE, Zhou P, Schroeder AJ, Falls K, Emmert DB, Russo SM, Gelbart WM. Gene Model Annotations for Drosophila melanogaster: The Rule-Benders. G3 (Bethesda, Md.). PMID 26109356 DOI: 10.1534/G3.115.018937  0.671
2015 dos Santos G, Schroeder AJ, Goodman JL, Strelets VB, Crosby MA, Thurmond J, Emmert DB, Gelbart WM. FlyBase: introduction of the Drosophila melanogaster Release 6 reference genome assembly and large-scale migration of genome annotations. Nucleic Acids Research. 43: D690-7. PMID 25398896 DOI: 10.1093/Nar/Gku1099  0.456
2009 Myrick KV, Huet F, Mohr SE, Alvarez-García I, Lu JT, Smith MA, Crosby MA, Gelbart WM. Large-scale functional annotation and expanded implementations of the P{wHy} hybrid transposon in the Drosophila melanogaster genome. Genetics. 182: 653-60. PMID 19398769 DOI: 10.1534/Genetics.109.103762  0.442
2007 Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Hodges E, et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature. 450: 219-32. PMID 17994088 DOI: 10.1038/Nature06340  0.544
2007 Lin MF, Carlson JW, Crosby MA, Matthews BB, Yu C, Park S, Wan KH, Schroeder AJ, Gramates LS, St Pierre SE, Roark M, Wiley KL, Kulathinal RJ, Zhang P, Myrick KV, et al. Revisiting the protein-coding gene catalog of Drosophila melanogaster using 12 fly genomes. Genome Research. 17: 1823-36. PMID 17989253 DOI: 10.1101/Gr.6679507  0.721
2007 Crosby MA, Goodman JL, Strelets VB, Zhang P, Gelbart WM. FlyBase: genomes by the dozen. Nucleic Acids Research. 35: D486-91. PMID 17099233 DOI: 10.1093/Nar/Gkl827  0.516
2005 Richards S, Liu Y, Bettencourt BR, Hradecky P, Letovsky S, Nielsen R, Thornton K, Hubisz MJ, Chen R, Meisel RP, Couronne O, Hua S, Smith MA, Zhang P, Liu J, ... ... Crosby MA, et al. Comparative genome sequencing of Drosophila pseudoobscura: chromosomal, gene, and cis-element evolution. Genome Research. 15: 1-18. PMID 15632085 DOI: 10.1101/Gr.3059305  0.697
2005 Drysdale RA, Crosby MA. FlyBase: genes and gene models. Nucleic Acids Research. 33: D390-5. PMID 15608223 DOI: 10.1093/nar/gki046  0.549
2002 Misra S, Crosby MA, Mungall CJ, Matthews BB, Campbell KS, Hradecky P, Huang Y, Kaminker JS, Millburn GH, Prochnik SE, Smith CD, Tupy JL, Whitfied EJ, Bayraktaroglu L, Berman BP, et al. Annotation of the Drosophila melanogaster euchromatic genome: a systematic review. Genome Biology. 3: RESEARCH0083. PMID 12537572 DOI: 10.1186/Gb-2002-3-12-Research0083  0.719
2002 Lewis SE, Searle SM, Harris N, Gibson M, Lyer V, Richter J, Wiel C, Bayraktaroglu L, Birney E, Crosby MA, Kaminker JS, Matthews BB, Prochnik SE, Smithy CD, Tupy JL, et al. Apollo: a sequence annotation editor. Genome Biology. 3: RESEARCH0082. PMID 12537571 DOI: 10.1186/Gb-2002-3-12-Research0082  0.675
2002 Huet F, Lu JT, Myrick KV, Baugh LR, Crosby MA, Gelbart WM. A deletion-generator compound element allows deletion saturation analysis for genomewide phenotypic annotation. Proceedings of the National Academy of Sciences of the United States of America. 99: 9948-53. PMID 12096187 DOI: 10.1073/Pnas.142310099  0.438
1999 Crosby MA, Miller C, Alon T, Watson KL, Verrijzer CP, Goldman-Levi R, Zak NB. The trithorax group gene moira encodes a brahma-associated putative chromatin-remodeling factor in Drosophila melanogaster. Molecular and Cellular Biology. 19: 1159-70. PMID 9891050 DOI: 10.1128/Mcb.19.2.1159  0.446
1997 Gelbart WM, Crosby M, Matthews B, Rindone WP, Chillemi J, Russo Twombly S, Emmert D, Ashburner M, Drysdale RA, Whitfield E, Millburn GH, de Grey A, Kaufman T, Matthews K, Gilbert D, et al. FlyBase: a Drosophila database. The FlyBase consortium. Nucleic Acids Research. 25: 63-6. PMID 9045212 DOI: 10.1093/Nar/25.1.63  0.7
1987 Crosby MA, Meyerowitz EM. Drosophila glue gene Sgs-3: sequences required for puffing and transcriptional regulation. Developmental Biology. 118: 593-607. PMID 2431935 DOI: 10.1016/0012-1606(86)90029-1  0.617
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