Steve Russell - Publications

Affiliations: 
University of Cambridge, Cambridge, England, United Kingdom 
Website:
http://www.gen.cam.ac.uk/Research/russell.htm

76 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Beh CY, El-Sharnouby S, Chatzipli A, Russell S, Choo SW, White R. Roles of cofactors and chromatin accessibility in Hox protein target specificity. Epigenetics & Chromatin. 9: 1. PMID 26753000 DOI: 10.1186/s13072-015-0049-x  1
2015 Skalska L, Stojnic R, Li J, Fischer B, Cerda-Moya G, Sakai H, Tajbakhsh S, Russell S, Adryan B, Bray SJ. Chromatin signatures at Notch-regulated enhancers reveal large-scale changes in H3K56ac upon activation. The Embo Journal. 34: 1889-904. PMID 26069324 DOI: 10.15252/embj.201489923  1
2015 Carl SH, Russell S. Common binding by redundant group B Sox proteins is evolutionarily conserved in Drosophila. Bmc Genomics. 16: 292. PMID 25887553 DOI: 10.1186/s12864-015-1495-3  1
2015 Simoni A, Siniscalchi C, Chan YS, Huen DS, Russell S, Windbichler N, Crisanti A. Development of synthetic selfish elements based on modular nucleases in Drosophila melanogaster. Nucleic Acids Research. 43: 2991. PMID 25675957 DOI: 10.1093/nar/gkv117  0.4
2015 Magbanua JP, Runneburger E, Russell S, White R. A variably occupied CTCF binding site in the ultrabithorax gene in the Drosophila bithorax complex. Molecular and Cellular Biology. 35: 318-30. PMID 25368383 DOI: 10.1128/MCB.01061-14  1
2014 Choo SW, Beh CY, Russell S, White R. Characterisation of Drosophila Ubx CPTI000601 and hth CPTI000378 protein trap lines. Thescientificworldjournal. 2014: 191535. PMID 25389534 DOI: 10.1155/2014/191535  1
2014 Lowe N, Rees JS, Roote J, Ryder E, Armean IM, Johnson G, Drummond E, Spriggs H, Drummond J, Magbanua JP, Naylor H, Sanson B, Bastock R, Huelsmann S, Trovisco V, ... ... Russell S, et al. Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library. Development (Cambridge, England). 141: 3994-4005. PMID 25294943 DOI: 10.1242/dev.111054  1
2014 Simoni A, Siniscalchi C, Chan YS, Huen DS, Russell S, Windbichler N, Crisanti A. Development of synthetic selfish elements based on modular nucleases in Drosophila melanogaster. Nucleic Acids Research. 42: 7461-72. PMID 24803674 DOI: 10.1093/nar/gku387  1
2014 Neville MC, Nojima T, Ashley E, Parker DJ, Walker J, Southall T, Van de Sande B, Marques AC, Fischer B, Brand AH, Russell S, Ritchie MG, Aerts S, Goodwin SF. Male-specific fruitless isoforms target neurodevelopmental genes to specify a sexually dimorphic nervous system. Current Biology : Cb. 24: 229-41. PMID 24440396 DOI: 10.1016/j.cub.2013.11.035  1
2013 Favrin G, Bean DM, Bilsland E, Boyer H, Fischer BE, Russell S, Crowther DC, Baylis HA, Oliver SG, Giannakou ME. Identification of novel modifiers of Aβ toxicity by transcriptomic analysis in the fruitfly. Scientific Reports. 3: 3512. PMID 24336499 DOI: 10.1038/srep03512  1
2013 Aleksic J, Ferrero E, Fischer B, Shen SP, Russell S. The role of Dichaete in transcriptional regulation during Drosophila embryonic development. Bmc Genomics. 14: 861. PMID 24314314 DOI: 10.1186/1471-2164-14-861  1
2013 Thomas SJ, Ashburner M, Tudor GS, Treeby J, Dean J, Routsis D, Rimmer YL, Russell SG, Burnet NG. Intra-fraction motion of the prostate during treatment with helical tomotherapy. Radiotherapy and Oncology : Journal of the European Society For Therapeutic Radiology and Oncology. 109: 482-6. PMID 24128804 DOI: 10.1016/j.radonc.2013.09.011  0.64
2013 Chan YS, Takeuchi R, Jarjour J, Huen DS, Stoddard BL, Russell S. The design and in vivo evaluation of engineered I-OnuI-based enzymes for HEG gene drive. Plos One. 8: e74254. PMID 24040217 DOI: 10.1371/journal.pone.0074254  1
2013 Chan YS, Huen DS, Glauert R, Whiteway E, Russell S. Optimising homing endonuclease gene drive performance in a semi-refractory species: the Drosophila melanogaster experience. Plos One. 8: e54130. PMID 23349805 DOI: 10.1371/journal.pone.0054130  1
2013 Housden BE, Fu AQ, Krejci A, Bernard F, Fischer B, Tavaré S, Russell S, Bray SJ. Transcriptional dynamics elicited by a short pulse of notch activation involves feed-forward regulation by E(spl)/Hes genes. Plos Genetics. 9: e1003162. PMID 23300480 DOI: 10.1371/journal.pgen.1003162  1
2013 Shen SP, Aleksic J, Russell S. Identifying targets of the Sox domain protein Dichaete in the Drosophila CNS via targeted expression of dominant negative proteins. Bmc Developmental Biology. 13: 1. PMID 23289785 DOI: 10.1186/1471-213X-13-1  1
2013 Fu AQ, Russell S, Bray SJ, Tavaré S. Bayesian clustering of replicated time-course gene expression data with weak signals Annals of Applied Statistics. 7: 1334-1361. DOI: 10.1214/13-AOAS650  1
2012 Russell S. From sequence to function: The impact of the genome sequence on drosophila biology Briefings in Functional Genomics. 11: 333-335. PMID 23023662 DOI: 10.1093/bfgp/els044  1
2012 Bossing T, Barros CS, Fischer B, Russell S, Shepherd D. Disruption of microtubule integrity initiates mitosis during CNS repair. Developmental Cell. 23: 433-40. PMID 22841498 DOI: 10.1016/j.devcel.2012.06.002  1
2012 Roote J, Russell S. Toward a complete Drosophila deficiency kit. Genome Biology. 13: 149. PMID 22445094 DOI: 10.1186/gb-2012-13-3-149  1
2012 Fischer BE, Wasbrough E, Meadows LA, Randlet O, Dorus S, Karr TL, Russell S. Conserved properties of Drosophila and human spermatozoal mRNA repertoires. Proceedings. Biological Sciences / the Royal Society. 279: 2636-44. PMID 22378807 DOI: 10.1098/rspb.2012.0153  1
2012 Adryan B, Russell S. Genome mapping and genomics in drosophila Genome Mapping and Genomics in Animals. 4: 31-86. DOI: 10.1007/978-3-642-31316-5-3  1
2011 Choo SW, Russell S. Genomic Approaches to Understanding Hox Gene Function Advances in Genetics. 76: 55-91. PMID 22099692 DOI: 10.1016/B978-0-12-386481-9.00003-1  1
2011 Baker DA, Russell S. Role of testis-specific gene expression in sex-chromosome evolution of Anopheles gambiae. Genetics. 189: 1117-20. PMID 21890740 DOI: 10.1534/genetics.111.133157  1
2011 Russell S. 'MiMICing' genomic flexibility Nature Methods. 8: 728-729. PMID 21878919 DOI: 10.1038/nmeth.1672  1
2011 Baker DA, Nolan T, Fischer B, Pinder A, Crisanti A, Russell S. A comprehensive gene expression atlas of sex- and tissue-specificity in the malaria vector, Anopheles gambiae. Bmc Genomics. 12: 296. PMID 21649883 DOI: 10.1186/1471-2164-12-296  1
2011 Choo SW, White R, Russell S. Genome-wide analysis of the binding of the hox protein ultrabithorax and the hox cofactor homothorax in Drosophila Plos One. 6. PMID 21483667 DOI: 10.1371/journal.pone.0014778  1
2011 Rees JS, Lowe N, Armean IM, Roote J, Johnson G, Drummond E, Spriggs H, Ryder E, Russell S, St Johnston D, Lilley KS. In vivo analysis of proteomes and interactomes using Parallel Affinity Capture (iPAC) coupled to mass spectrometry. Molecular & Cellular Proteomics : McP. 10: M110.002386. PMID 21447707 DOI: 10.1074/mcp.M110.002386  1
2011 Nègre N, Brown CD, Ma L, Bristow CA, Miller SW, Wagner U, Kheradpour P, Eaton ML, Loriaux P, Sealfon R, Li Z, Ishii H, Spokony RF, Chen J, Hwang L, ... ... Russell S, et al. A cis-regulatory map of the Drosophila genome. Nature. 471: 527-31. PMID 21430782 DOI: 10.1038/nature09990  1
2011 Sykacek P, Kreil DP, Meadows LA, Auburn RP, Fischer B, Russell S, Micklem G. The impact of quantitative optimization of hybridization conditions on gene expression analysis Bmc Bioinformatics. 12. PMID 21401920 DOI: 10.1186/1471-2105-12-73  1
2011 Chan YS, Naujoks DA, Huen DS, Russell S. Insect population control by homing endonuclease-based gene drive: an evaluation in Drosophila melanogaster. Genetics. 188: 33-44. PMID 21368273 DOI: 10.1534/genetics.111.127506  1
2010 Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, ... ... Russell S, et al. Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (New York, N.Y.). 330: 1787-97. PMID 21177974 DOI: 10.1126/science.1198374  1
2010 Meadows LA, Chan YS, Roote J, Russell S. Neighbourhood continuity is not required for correct testis gene expression in Drosophila. Plos Biology. 8: e1000552. PMID 21151342 DOI: 10.1371/journal.pbio.1000552  1
2010 Huen DS, Russell S. On the use of resampling tests for evaluating statistical significance of binding-site co-occurrence. Bmc Bioinformatics. 11: 359. PMID 20591178 DOI: 10.1186/1471-2105-11-359  1
2010 Cossais F, Sock E, Hornig J, Schreiner S, Kellerer S, Bösl MR, Russell S, Wegner M. Replacement of mouse Sox10 by the Drosophila ortholog Sox100B provides evidence for co-option of SoxE proteins into vertebrate-specific gene-regulatory networks through altered expression Developmental Biology. 341: 267-281. PMID 20144603 DOI: 10.1016/j.ydbio.2010.01.038  1
2010 Nègre N, Brown CD, Shah PK, Kheradpour P, Morrison CA, Henikoff JG, Feng X, Ahmad K, Russell S, White RA, Stein L, Henikoff S, Kellis M, White KP. A comprehensive map of insulator elements for the Drosophila genome. Plos Genetics. 6: e1000814. PMID 20084099 DOI: 10.1371/journal.pgen.1000814  1
2010 Kosík O, Auburn RP, Russell S, Stratilová E, Garajová S, Hrmova M, Farkas V. Polysaccharide microarrays for high-throughput screening of transglycosylase activities in plant extracts Glycoconjugate Journal. 27: 79-87. PMID 19953317 DOI: 10.1007/s10719-009-9271-8  1
2010 Phochanukul N, Russell S. No backbone but lots of Sox: Invertebrate Sox genes International Journal of Biochemistry and Cell Biology. 42: 453-464. PMID 19589395 DOI: 10.1016/j.biocel.2009.06.013  1
2009 Aleksic J, Russell S. ChIPing away at the genome: the new frontier travel guide. Molecular Biosystems. 5: 1421-8. PMID 19617957 DOI: 10.1039/B906179G  1
2009 Aleksic J, Lazic R, Müller I, Russell SR, Adryan B. Biases in Drosophila melanogaster protein trap screens. Bmc Genomics. 10: 249. PMID 19476619 DOI: 10.1186/1471-2164-10-249  1
2009 Baker DA, Russell S. Gene expression during Drosophila melanogaster egg development before and after reproductive diapause. Bmc Genomics. 10: 242. PMID 19463195 DOI: 10.1186/1471-2164-10-242  1
2009 Nanda S, DeFalco TJ, Loh SH, Phochanukul N, Camara N, Van Doren M, Russell S. Sox100B, a Drosophila group E Sox-domain gene, is required for somatic testis differentiation. Sexual Development : Genetics, Molecular Biology, Evolution, Endocrinology, Embryology, and Pathology of Sex Determination and Differentiation. 3: 26-37. PMID 19339815 DOI: 10.1159/000200079  1
2009 Ryder E, Spriggs H, Drummond E, St Johnston D, Russell S. The Flannotator--a gene and protein expression annotation tool for Drosophila melanogaster. Bioinformatics (Oxford, England). 25: 548-9. PMID 19126575 DOI: 10.1093/bioinformatics/btp012  1
2008 Kwong C, Adryan B, Bell I, Meadows L, Russell S, Manak JR, White R. Stability and dynamics of polycomb target sites in Drosophila development. Plos Genetics. 4: e1000178. PMID 18773083 DOI: 10.1371/journal.pgen.1000178  1
2008 Russell S. SNPing and chipping away at the fly genome Nature Methods. 5: 295-296. PMID 18376392 DOI: 10.1038/nmeth0408-295  1
2007 Baker DA, Meadows LA, Wang J, Dow JA, Russell S. Variable sexually dimorphic gene expression in laboratory strains of Drosophila melanogaster. Bmc Genomics. 8: 454. PMID 18070343 DOI: 10.1186/1471-2164-8-454  1
2007 Ryder E, Ashburner M, Bautista-Llacer R, Drummond J, Webster J, Johnson G, Morley T, Chan YS, Blows F, Coulson D, Reuter G, Baisch H, Apelt C, Kauk A, Rudolph T, ... ... Russell S, et al. The DrosDel deletion collection: a Drosophila genomewide chromosomal deficiency resource. Genetics. 177: 615-29. PMID 17720900 DOI: 10.1534/genetics.107.076216  1
2007 Adryan B, Woerfel G, Birch-Machin I, Gao S, Quick M, Meadows L, Russell S, White R. Genomic mapping of Suppressor of Hairy-wing binding sites in Drosophila. Genome Biology. 8: R167. PMID 17705839 DOI: 10.1186/gb-2007-8-8-r167  1
2007 Samsonova AA, Niranjan M, Russell S, Brazma A. Prediction of gene expression in embryonic structures of Drosophila melanogaster. Plos Computational Biology. 3: e144. PMID 17658945 DOI: 10.1371/journal.pcbi.0030144  1
2007 Holohan EE, Kwong C, Adryan B, Bartkuhn M, Herold M, Renkawitz R, Russell S, White R. CTCF genomic binding sites in Drosophila and the organisation of the bithorax complex. Plos Genetics. 3: e112. PMID 17616980 DOI: 10.1371/journal.pgen.0030112  1
2007 Lyne R, Smith R, Rutherford K, Wakeling M, Varley A, Guillier F, Janssens H, Ji W, Mclaren P, North P, Rana D, Riley T, Sullivan J, Watkins X, Woodbridge M, ... ... Russell S, et al. FlyMine: an integrated database for Drosophila and Anopheles genomics. Genome Biology. 8: R129. PMID 17615057 DOI: 10.1186/gb-2007-8-7-r129  1
2006 Russell S. Learning to fly - Getting the best out of microarrays Molecular Biosystems. 2: 402-405. PMID 17153135 DOI: 10.1039/b608002m  1
2006 Kreil DP, Russell RR, Russell S. [4] Microarray Oligonucleotide Probes Methods in Enzymology. 410: 73-98. PMID 16938547 DOI: 10.1016/S0076-6879(06)10004-X  1
2006 Auburn RP, Russell RR, Fischer B, Meadows LA, Matilla SS, Russell S. SimArray: A user-friendly and user-configurable microarray design tool Bmc Bioinformatics. 7. PMID 16509966 DOI: 10.1186/1471-2105-7-102  1
2006 Ryder E, Jackson R, Ferguson-Smith A, Russell S. MAMMOT--a set of tools for the design, management and visualization of genomic tiling arrays. Bioinformatics (Oxford, England). 22: 883-4. PMID 16452111 DOI: 10.1093/bioinformatics/btl031  1
2005 Page AR, Kovacs A, Deak P, Torok T, Kiss I, Dario P, Bastos C, Batista P, Gomes R, Ohkura H, Russell S, Glover DM. Spotted-dick, a zinc-finger protein of Drosophila required for expression of Orc4 and S phase. The Embo Journal. 24: 4304-15. PMID 16369566 DOI: 10.1038/sj.emboj.7600890  1
2005 Birch-Machin I, Gao S, Huen D, McGirr R, White RA, Russell S. Genomic analysis of heat-shock factor targets in Drosophila. Genome Biology. 6: R63. PMID 15998452 DOI: 10.1186/gb-2005-6-7-r63  1
2005 Auburn RP, Kreil DP, Meadows LA, Fischer B, Matilla SS, Russell S. Robotic spotting of cDNA and oligonucleotide microarrays Trends in Biotechnology. 23: 374-379. PMID 15978318 DOI: 10.1016/j.tibtech.2005.04.002  1
2005 McKimmie C, Woerfel G, Russell S. Conserved genomic organisation of Group B Sox genes in insects Bmc Genetics. 6. PMID 15943880 DOI: 10.1186/1471-2156-6-26  1
2004 Ryder E, Blows F, Ashburner M, Bautista-Llacer R, Coulson D, Drummond J, Webster J, Gubb D, Gunton N, Johnson G, O'Kane CJ, Huen D, Sharma P, Asztalos Z, Baisch H, ... ... Russell S, et al. The DrosDel collection: a set of P-element insertions for generating custom chromosomal aberrations in Drosophila melanogaster. Genetics. 167: 797-813. PMID 15238529 DOI: 10.1534/genetics.104.026658  1
2003 Ryder E, Russell S. Transposable elements as tools for genomics and genetics in Drosophila Briefings in Functional Genomics and Proteomics. 2: 57-71. PMID 15239944 DOI: 10.1093/bfgp/2.1.57  1
2003 DeFalco TJ, Verney G, Jenkins AB, McCaffery JM, Russell S, Van Doren M. Sex-specific apoptosis regulates sexual dimorphism in the Drosophila embryonic gonad. Developmental Cell. 5: 205-16. PMID 12919673 DOI: 10.1016/S1534-5807(03)00204-1  1
2003 Whitworth AJ, Russell S. Temporally dynamic response to Wingless directs the sequential elaboration of the proximodistal axis of the Drosophila wing. Developmental Biology. 254: 277-88. PMID 12591247 DOI: 10.1016/S0012-1606(02)00036-2  1
2002 Tickoo S, Russell S. Drosophila melanogaster as a model system for drug discovery and pathway screening Current Opinion in Pharmacology. 2: 555-560. PMID 12324259 DOI: 10.1016/S1471-4892(02)00206-0  1
2002 Overton PM, Meadows LA, Urban J, Russell S. Evidence for differential and redundant function of the Sox genes Dichaete and SoxN during CNS development in Drosophila. Development (Cambridge, England). 129: 4219-28. PMID 12183374  1
2001 Meadows L, Russell S. Sugar and spice or slugs and snails? Trends in Genetics. 17: 18.  1
2000 Hui Yong Loh S, Russell S. A Drosophila group E Sox gene is dynamically expressed in the embryonic alimentary canal Mechanisms of Development. 93: 185-188. PMID 10781954 DOI: 10.1016/S0925-4773(00)00258-6  1
2000 Sánchez-Soriano N, Russell S. Regulatory mutations of the Drosophila Sox gene Dichaete reveal new functions in embryonic brain and hindgut development. Developmental Biology. 220: 307-21. PMID 10753518 DOI: 10.1006/dbio.2000.9648  1
1999 Stowers RS, Russell S, Garza D. The 82F late puff contains the L82 gene, an essential member of a novel gene family. Developmental Biology. 213: 116-30. PMID 10452850 DOI: 10.1006/dbio.1999.9358  1
1998 Soriano NS, Russell S. The Drosophila SOX-domain protein Dichaete is required for the development of the central nervous system midline Development. 125: 3989-3996. PMID 9735360  1
1997 Goodwin SF, Del Vecchio M, Velinzon K, Hogel C, Russell SR, Tully T, Kaiser K. Defective learning in mutants of the Drosophila gene for a regulatory subunit of cAMP-dependent protein kinase. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. 17: 8817-27. PMID 9348350  1
1996 Russell SRH. Nuclear hormone receptors and the Drosophila ecdysone response Biochemical Society Symposium. 62: 111-121. PMID 8971344  1
1996 Russell SR, Sanchez-Soriano N, Wright CR, Ashburner M. The Dichaete gene of Drosophila melanogaster encodes a SOX-domain protein required for embryonic segmentation. Development (Cambridge, England). 122: 3669-76. PMID 8951082  1
1996 Russell SR, Heimbeck G, Goddard CM, Carpenter AT, Ashburner M. The Drosophila Eip78C gene is not vital but has a role in regulating chromosome puffs. Genetics. 144: 159-70. PMID 8878682  1
1994 Russell SR, Kaiser K. A Drosophila melanogaster chromosome 2L repeat is expressed in the male germ line. Chromosoma. 103: 63-72. PMID 8013257 DOI: 10.1007/BF00364727  1
1993 Russell SR, Kaiser K. Drosophila melanogaster male germ line-specific transcripts with autosomal and Y-linked genes. Genetics. 134: 293-308. PMID 8514138  1
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