Ruth Lovering - Publications


54 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Jiang Y, Oron TR, Clark WT, Bankapur AR, D'Andrea D, Lepore R, Funk CS, Kahanda I, Verspoor KM, Ben-Hur A, Koo da CE, Penfold-Brown D, Shasha D, Youngs N, Bonneau R, ... ... Lovering RC, et al. An expanded evaluation of protein function prediction methods shows an improvement in accuracy. Genome Biology. 17: 184. PMID 27604469 DOI: 10.1186/s13059-016-1037-6  1
2016 Foulger RE, Denny P, Hardy J, Martin MJ, Sawford T, Lovering RC. Using the Gene Ontology to Annotate Key Players in Parkinson's Disease. Neuroinformatics. PMID 26825309 DOI: 10.1007/s12021-015-9293-2  1
2016 White J, Sofat R, Hemani G, Shah T, Engmann J, Dale C, Shah S, Kruger FA, Giambartolomei C, Swerdlow DI, Palmer T, McLachlan S, Langenberg C, Zabaneh D, Lovering R, et al. Plasma urate concentration and risk of coronary heart disease: a Mendelian randomisation analysis. The Lancet. Diabetes & Endocrinology. PMID 26781229 DOI: 10.1016/S2213-8587(15)00386-1  1
2015 Patel S, Roncaglia P, Lovering RC. Using Gene Ontology to describe the role of the neurexin-neuroligin-SHANK complex in human, mouse and rat and its relevance to autism. Bmc Bioinformatics. 16: 186. PMID 26047810 DOI: 10.1186/s12859-015-0622-0  1
2015 Manzoni C, Denny P, Lovering RC, Lewis PA. Computational analysis of the LRRK2 interactome. Peerj. 3: e778. PMID 25737818 DOI: 10.7717/peerj.778  1
2015 Kalea AZ, Hoteit R, Suvan J, Lovering RC, Palmen J, Cooper JA, Khodiyar VK, Harrington Z, Humphries SE, D'Aiuto F. Upregulation of gingival tissue miR-200b in obese periodontitis subjects. Journal of Dental Research. 94: 59S-69S. PMID 25630869 DOI: 10.1177/0022034514568197  1
2015 Blake JA, Christie KR, Dolan ME, Drabkin HJ, Hill DP, Ni L, Sitnikov D, Burgess S, Buza T, Gresham C, McCarthy F, Pillai L, Wang H, Carbon S, Dietze H, ... ... Lovering RC, et al. Gene Ontology Consortium: Going forward Nucleic Acids Research. 43: D1049-D1056. DOI: 10.1093/nar/gku1179  1
2014 Huntley RP, Harris MA, Alam-Faruque Y, Blake JA, Carbon S, Dietze H, Dimmer EC, Foulger RE, Hill DP, Khodiyar VK, Lock A, Lomax J, Lovering RC, Mutowo-Meullenet P, Sawford T, et al. A method for increasing expressivity of Gene Ontology annotations using a compositional approach. Bmc Bioinformatics. 15: 155. PMID 24885854 DOI: 10.1186/1471-2105-15-155  1
2014 Orchard S, Ammari M, Aranda B, Breuza L, Briganti L, Broackes-Carter F, Campbell NH, Chavali G, Chen C, del-Toro N, Duesbury M, Dumousseau M, Galeota E, Hinz U, Iannuccelli M, ... ... Lovering RC, et al. The MIntAct project--IntAct as a common curation platform for 11 molecular interaction databases. Nucleic Acids Research. 42: D358-63. PMID 24234451 DOI: 10.1093/nar/gkt1115  1
2013 Khodiyar VK, Howe D, Talmud PJ, Breckenridge R, Lovering RC. From zebrafish heart jogging genes to mouse and human orthologs: using Gene Ontology to investigate mammalian heart development. F1000research. 2: 242. PMID 24627794 DOI: 10.12688/f1000research.2-242.v2  1
2013 Asselbergs FW, Lovering RC, Drenos F. Progress in genetic association studies of plasma lipids. Current Opinion in Lipidology. 24: 123-8. PMID 23385652 DOI: 10.1097/MOL.0b013e32835df2d6  1
2011 Alam-Faruque Y, Huntley RP, Khodiyar VK, Camon EB, Dimmer EC, Sawford T, Martin MJ, O'Donovan C, Talmud PJ, Scambler P, Apweiler R, Lovering RC. The impact of focused Gene Ontology curation of specific mammalian systems. Plos One. 6: e27541. PMID 22174742 DOI: 10.1371/journal.pone.0027541  1
2011 Stables MJ, Shah S, Camon EB, Lovering RC, Newson J, Bystrom J, Farrow S, Gilroy DW. Transcriptomic analyses of murine resolution-phase macrophages. Blood. 118: e192-208. PMID 22012065 DOI: 10.1182/blood-2011-04-345330  1
2011 Khodiyar VK, Hill DP, Howe D, Berardini TZ, Tweedie S, Talmud PJ, Breckenridge R, Bhattarcharya S, Riley P, Scambler P, Lovering RC. The representation of heart development in the gene ontology. Developmental Biology. 354: 9-17. PMID 21419760 DOI: 10.1016/j.ydbio.2011.03.011  1
2010 Khodiyar VK, Dimmer EC, Huntley RP, Lovering RC. Fundamentals of Gene Ontology Functional Annotation Knowledge-Based Bioinformatics: From Analysis to Interpretation. 169-208. DOI: 10.1002/9780470669716.ch8  1
2009 Talmud PJ, Drenos F, Shah S, Shah T, Palmen J, Verzilli C, Gaunt TR, Pallas J, Lovering R, Li K, Casas JP, Sofat R, Kumari M, Rodriguez S, Johnson T, et al. Gene-centric association signals for lipids and apolipoproteins identified via the HumanCVD BeadChip. American Journal of Human Genetics. 85: 628-42. PMID 19913121 DOI: 10.1016/j.ajhg.2009.10.014  1
2009 Lovering RC, Dimmer EC, Talmud PJ. Improvements to cardiovascular gene ontology. Atherosclerosis. 205: 9-14. PMID 19046747 DOI: 10.1016/j.atherosclerosis.2008.10.014  1
2009 Gaudet P, Chisholm R, Berardini T, Dimmer E, Engel SR, Fey P, Hill DP, Howe D, Hu JC, Huntley R, Khodiyar VK, Kishore R, Li D, Lovering RC, McCarthy F, et al. The gene ontology's reference genome project: A unified framework for functional annotation across species Plos Computational Biology. 5. DOI: 10.1371/journal.pcbi.1000431  1
2009 Khodiyar VK, Maltais LJ, Ruef BJ, Sneddon KMB, Smith JR, Shimoyama M, Cabral F, Dumontet C, Dutcher SK, Harvey RJ, Lafanechère L, Murray JM, Nogales E, Piquemal D, Stanchi F, ... ... Lovering RC, et al. Corrigendum to "A revised nomenclature for the human and rodent α-tubulin gene family" [Genomics 90 (2007) 285-289] (DOI:10.1016/j.ygeno.2007.04.008) Genomics. 93: 397. DOI: 10.1016/j.ygeno.2008.12.002  1
2008 Lovering RC, Camon EB, Blake JA, Diehl AD. Access to immunology through the Gene Ontology. Immunology. 125: 154-60. PMID 18798919 DOI: 10.1111/j.1365-2567.2008.02940.x  1
2008 Lovering RC, Dimmer E, Khodiyar VK, Barrell DG, Scambler P, Hubank M, Apweiler R, Talmud PJ. Cardiovascular GO annotation initiative year 1 report: why cardiovascular GO? Proteomics. 8: 1950-3. PMID 18491309 DOI: 10.1002/pmic.200800078  1
2008 Ting JP, Lovering RC, Alnemri ES, Bertin J, Boss JM, Davis BK, Flavell RA, Girardin SE, Godzik A, Harton JA, Hoffman HM, Hugot JP, Inohara N, Mackenzie A, Maltais LJ, et al. The NLR gene family: a standard nomenclature. Immunity. 28: 285-7. PMID 18341998 DOI: 10.1016/j.immuni.2008.02.005  1
2008 Talmud PJ, Cooper JA, Palmen J, Lovering R, Drenos F, Hingorani AD, Humphries SE. Chromosome 9p21.3 coronary heart disease locus genotype and prospective risk of CHD in healthy middle-aged men. Clinical Chemistry. 54: 467-74. PMID 18250146 DOI: 10.1373/clinchem.2007.095489  1
2007 Khodiyar VK, Maltais LJ, Ruef BJ, Sneddon KM, Smith JR, Shimoyama M, Cabral F, Dumontet C, Dutcher SK, Harvey RJ, Lafanechère L, Murray JM, Nogales E, Piquemal D, Stanchi F, ... ... Lovering RC, et al. A revised nomenclature for the human and rodent alpha-tubulin gene family. Genomics. 90: 285-9. PMID 17543498 DOI: 10.1016/j.ygeno.2007.04.008  1
2007 Brown SJ, Tilli CM, Jackson B, Avilion AA, MacLeod MC, Maltais LJ, Lovering RC, Byrne C. Rodent Lce gene clusters; new nomenclature, gene organization, and divergence of human and rodent genes. The Journal of Investigative Dermatology. 127: 1782-6. PMID 17410201 DOI: 10.1038/sj.jid.5700792  1
2006 Marenholz I, Lovering RC, Heizmann CW. An update of the S100 nomenclature. Biochimica Et Biophysica Acta. 1763: 1282-3. PMID 16938360 DOI: 10.1016/j.bbamcr.2006.07.013  1
2006 Maltais LJ, Lovering RC, Taranin AV, Colonna M, Ravetch JV, Dalla-Favera R, Burrows PD, Cooper MD, Davis RS. New nomenclature for Fc receptor-like molecules. Nature Immunology. 7: 431-2. PMID 16622424 DOI: 10.1038/ni0506-431  1
2006 Scherer SE, Muzny DM, Buhay CJ, Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris RA, Hawes AC, Hernandez J, Hodgson AV, Hume J, Jackson A, ... ... Lovering RC, et al. The finished DNA sequence of human chromosome 12. Nature. 440: 346-51. PMID 16541075 DOI: 10.1038/nature04569  1
2006 Kahn RA, Cherfils J, Elias M, Lovering RC, Munro S, Schurmann A. Nomenclature for the human Arf family of GTP-binding proteins: ARF, ARL, and SAR proteins. The Journal of Cell Biology. 172: 645-50. PMID 16505163 DOI: 10.1083/jcb.200512057  1
2004 Horton R, Wilming L, Rand V, Lovering RC, Bruford EA, Khodiyar VK, Lush MJ, Povey S, Talbot CC, Wright MW, Wain HM, Trowsdale J, Ziegler A, Beck S. Gene map of the extended human MHC. Nature Reviews. Genetics. 5: 889-99. PMID 15573121 DOI: 10.1038/nrg1489  1
2004 Jin J, Cardozo T, Lovering RC, Elledge SJ, Pagano M, Harper JW. Systematic analysis and nomenclature of mammalian F-box proteins. Genes & Development. 18: 2573-80. PMID 15520277 DOI: 10.1101/gad.1255304  1
2003 Smith AN, Lovering RC, Futai M, Takeda J, Brown D, Karet FE. Revised nomenclature for mammalian vacuolar-type H+ -ATPase subunit genes. Molecular Cell. 12: 801-3. PMID 14580332 DOI: 10.1016/S1097-2765(03)00397-6  1
2002 Wain HM, Bruford EA, Lovering RC, Lush MJ, Wright MW, Povey S. Guidelines for human gene nomenclature. Genomics. 79: 464-70. PMID 11944974 DOI: 10.1006/geno.2002.6748  1
2001 Povey S, Lovering R, Bruford E, Wright M, Lush M, Wain H. The HUGO Gene Nomenclature Committee (HGNC). Human Genetics. 109: 678-80. PMID 11810281 DOI: 10.1007/s00439-001-0615-0  1
2000 Wain H, Bruford E, Duncanson A, Lovering R, Povey S. Nomenclature: Genes, weights and measures, animals, elements, and planets Radiation Research. 154: 1-2.  1
1997 De Weers M, Dingjan GM, Brouns GS, Kraakman ME, Mensink RG, Lovering RC, Schuurman RK, Borst J, Hendriks RW. Expression of Bruton's tyrosine kinase in B lymphoblastoid cell lines from X-linked agammaglobulinaemia patients. Clinical and Experimental Immunology. 107: 235-40. PMID 9030858  1
1996 Cory GO, MacCarthy-Morrogh L, Banin S, Gout I, Brickell PM, Levinsky RJ, Kinnon C, Lovering RC. Evidence that the Wiskott-Aldrich syndrome protein may be involved in lymphoid cell signaling pathways. Journal of Immunology (Baltimore, Md. : 1950). 157: 3791-5. PMID 8892607  1
1995 Kinnon C, Lovering R, O'Reilly MA, Sweatman A, Bradley L, Parkar M, Alterman L, Levinsky R. Physical and genetic approaches to the isolation of the gene for X-linked agammaglobulinemia. Immunodeficiency. 5: 179-85. PMID 7749437  1
1995 Hinshelwood S, Lovering RC, Genevier HC, Levinsky RJ, Kinnon C. The protein defective in X-linked agammaglobulinemia, Bruton's tyrosine kinase, shows increased autophosphorylation activity in vitro when isolated from cells in which the B cell receptor has been cross-linked. European Journal of Immunology. 25: 1113-6. PMID 7737282 DOI: 10.1002/eji.1830250439  1
1995 Gaspar HB, Bradley LA, Katz F, Lovering RC, Roifman CM, Morgan G, Levinsky RJ, Kinnon C. Mutation analysis in Bruton's tyrosine kinase, the X-linked agammaglobulinaemia gene, including identification of an insertional hotspot. Human Molecular Genetics. 4: 755-7. PMID 7633429 DOI: 10.1093/hmg/4.4.755  1
1994 Parkar M, Lovering R, Levinsky RJ, Kinnon C. Genetic mapping of two loci, DXS454 and DXS458, with respect to the X-linked agammaglobulinemia gene locus. Human Genetics. 93: 89-90. PMID 8270264 DOI: 10.1007/BF00218924  1
1994 Bradley LA, Sweatman AK, Lovering RC, Jones AM, Morgan G, Levinsky RJ, Kinnon C. Mutation detection in the X-linked agammaglobulinemia gene, BTK, using single strand conformation polymorphism analysis. Human Molecular Genetics. 3: 79-83. PMID 8162056  1
1994 Katz FE, Lovering RC, Bradley LA, Rigley KP, Brown D, Cotter F, Chessells JM, Levinsky RJ, Kinnon C. Expression of the X-linked agammaglobulinemia gene, btk in B-cell acute lymphoblastic leukemia. Leukemia. 8: 574-7. PMID 8152253  1
1994 Lovering RC, Sweatman A, Genet SA, Middleton-Price HR, Vetrie D, Vorechovsky I, Bentley D, Fontan G, Español T, Morgan G. Identification of deletions in the btk gene allows unambiguous assessment of carrier status in families with X-linked agammaglobulinaemia. Human Genetics. 94: 77-9. PMID 8034298 DOI: 10.1007/BF02272846  1
1994 Sweatman AK, Bradley LA, Lovering RC, O'Reilly MA, Levinsky RJ, Kinnon C. Physical mapping in the region of the Bruton's tyrosine kinase and alpha-galactosidase A gene loci in proximal Xq22. Human Genetics. 94: 624-8. PMID 7989038 DOI: 10.1007/BF00206955  1
1994 Genevier HC, Hinshelwood S, Gaspar HB, Rigley KP, Brown D, Saeland S, Rousset F, Levinsky RJ, Callard RE, Kinnon C, Lovering RC. Expression of Bruton's tyrosine kinase protein within the B cell lineage European Journal of Immunology. 24: 3100-3105. PMID 7805739 DOI: 10.1002/eji.1830241228  1
1993 Lovering R, Middleton-Price HR, O'Reilly MAJ, Genet SA, Parkar M, Sweatman AK, Bradley LD, Alterman LA, Malcolm S, Morgan G, Levinsky RJ, Kinnon C. Genetic linkage analysis identifies new proximal and distal flanking markers for the X-linked agammaglobulinemia gene locus, refining its localization in Xq22 Human Molecular Genetics. 2: 139-141. PMID 8499902  1
1993 Alterman LA, de Alwis M, Genet S, Lovering R, Middleton-Price H, Morgan G, Jones A, Malcolm S, Levinsky RJ, Kinnon C. Carrier determination for X-linked agammaglobulinemia using X inactivation analysis of purified B cells. Journal of Immunological Methods. 166: 111-6. PMID 8228281 DOI: 10.1016/0022-1759(93)90334-4  1
1993 O'Reilly MA, Sweatman AK, Bradley LD, Alterman LA, Lovering R, Malcolm S, Levinsky RJ, Kinnon C. Isolation and mapping of discrete DXS101 loci in Xq22 near the X-linked agammaglobulinaemia gene locus. Human Genetics. 91: 605-8. PMID 8101833 DOI: 10.1007/BF00205088  1
1993 Sweatman A, Lovering R, Middleton-Price H, Jones A, Morgan G, Levinsky R, Kinnon C. A new restriction fragment length polymorphism at the DXS101 locus allows carrier detection in a family with X linked agammaglobulinaemia Journal of Medical Genetics. 30: 512-514. PMID 8100857  1
1993 Lovering R, Hanson IM, Borden KLB, Martin S, O'Reilly NJ, Evan GI, Rahman D, Pappin DJC, Trowsdale J, Freemont PS. Identification and preliminary characterization of a protein motif related to the zinc finger Proceedings of the National Academy of Sciences of the United States of America. 90: 2112-2116. PMID 7681583  1
1993 Kinnon C, Hinshelwood S, Levinsky RJ, Lovering RC. X-linked agammaglobulinemia - gene cloning and future prospects Trends in Immunology. 14: 554-558.  1
1991 Lovering R, Harden N, Ashburner M. The molecular structure of TE146 and its derivatives in Drosophila melanogaster. Genetics. 128: 357-72. PMID 1649070  1
1991 Lovering R, Trowsdale J. A gene coding 22 highly related zinc fingers is expressed in lymphoid cell lines Nucleic Acids Research. 19: 2921-2928.  1
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