Nick Baker - Publications


155 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Baker NE. Author Correction: Emerging mechanisms of cell competition. Nature Reviews. Genetics. PMID 32860015 DOI: 10.1038/s41576-020-00283-y  0.01
2020 Baker NE. Emerging mechanisms of cell competition. Nature Reviews. Genetics. PMID 32778819 DOI: 10.1038/s41576-020-0262-8  0.01
2020 Caverzasi E, Cordano C, Zhu AH, Zhao C, Bischof A, Kirkish G, Bennett DJ, Devereux M, Baker N, Inman J, Yiu HH, Papinutto N, Gelfand JM, Cree BAC, Hauser SL, et al. Imaging correlates of visual function in multiple sclerosis. Plos One. 15: e0235615. PMID 32745132 DOI: 10.1371/Journal.Pone.0235615  0.01
2020 Blanco J, Cooper JC, Baker NE. Roles of C/EBP class bZip proteins in the growth and cell competition of ('Minute') mutants in . Elife. 9. PMID 31909714 DOI: 10.7554/eLife.50535  0.01
2019 Ji Z, Kiparaki M, Folgado V, Kumar A, Blanco J, Rimesso G, Chuen J, Liu Y, Zheng D, Baker NE. Drosophila RpS12 controls translation, growth, and cell competition through Xrp1. Plos Genetics. 15: e1008513. PMID 31841522 DOI: 10.1371/Journal.Pgen.1008513  0.01
2019 Wang LH, Baker NE. Correction: Salvador-Warts-Hippo pathway regulates sensory organ development via caspase-dependent nonapoptotic signaling. Cell Death & Disease. 10: 797. PMID 31641110 DOI: 10.1038/s41419-019-2029-8  0.04
2019 Wang LH, Baker NE. Salvador-Warts-Hippo pathway regulates sensory organ development via caspase-dependent nonapoptotic signaling. Cell Death & Disease. 10: 669. PMID 31511495 DOI: 10.1038/s41419-019-1924-3  0.04
2019 Li K, Baker NE. Transcriptional and post-transcriptional regulation of extra macrochaetae during Drosophila adult peripheral neurogenesis. Developmental Biology. PMID 30771303 DOI: 10.1016/j.ydbio.2019.02.003  0.01
2018 Baker NE, Kiparaki M, Khan C. A potential link between p53, cell competition and ribosomopathy in mammals and in Drosophila. Developmental Biology. PMID 30513308 DOI: 10.1016/j.ydbio.2018.11.018  0.01
2018 Kale A, Baker NE. Tumor evolution: Multiple induction mechanisms for cell competition. Molecular & Cellular Oncology. 5: e1481812. PMID 30263943 DOI: 10.1080/23723556.2018.1481812  0.04
2018 Lee CH, Kiparaki M, Blanco J, Folgado V, Ji Z, Kumar A, Rimesso G, Baker NE. A Regulatory Response to Ribosomal Protein Mutations Controls Translation, Growth, and Cell Competition. Developmental Cell. 46: 807. PMID 30253171 DOI: 10.1016/j.devcel.2018.09.009  0.01
2018 Lee CH, Kiparaki M, Blanco J, Folgado V, Ji Z, Kumar A, Rimesso G, Baker NE. A Regulatory Response to Ribosomal Protein Mutations Controls Translation, Growth, and Cell Competition. Developmental Cell. PMID 30078730 DOI: 10.1016/j.devcel.2018.07.003  0.01
2018 Wang LH, Baker NE. Spatial regulation of expanded transcription in the Drosophila wing imaginal disc. Plos One. 13: e0201317. PMID 30063727 DOI: 10.1371/journal.pone.0201317  0.04
2018 Baker NE, Brown NL. All in the family: proneural bHLH genes and neuronal diversity. Development (Cambridge, England). 145. PMID 29720483 DOI: 10.1242/dev.159426  0.01
2018 Li K, Baker NE. Regulation of the ID protein Extra macrochaetae by proneural dimerization partners. Elife. 7. PMID 29687780 DOI: 10.7554/eLife.33967  0.01
2018 Kale A, Ji Z, Kiparaki M, Blanco J, Rimesso G, Flibotte S, Baker NE. Ribosomal Protein S12e Has a Distinct Function in Cell Competition. Developmental Cell. 44: 42-55.e4. PMID 29316439 DOI: 10.1016/j.devcel.2017.12.007  0.04
2017 Bhattacharya A, Li K, Quiquand M, Rimesso G, Baker NE. The Notch pathway regulates the Second Mitotic Wave cell cycle independently of bHLH proteins. Developmental Biology. PMID 28919436 DOI: 10.1016/j.ydbio.2017.08.035  0.01
2017 Baker NE. Patterning the eye: A role for the cell cycle? Developmental Biology. PMID 28733162 DOI: 10.1016/j.ydbio.2017.07.006  0.01
2017 Baker NE. Mechanisms of cell competition emerging from Drosophila studies. Current Opinion in Cell Biology. 48: 40-46. PMID 28600967 DOI: 10.1016/  0.01
2016 Kale A, Rimesso G, Baker NE. Local Cell Death Changes the Orientation of Cell Division in the Developing Drosophila Wing Imaginal Disc Without Using Fat or Dachsous as Orienting Signals. Plos One. 11: e0167637. PMID 28030539 DOI: 10.1371/journal.pone.0167637  0.04
2016 Lee CH, Rimesso G, Reynolds DM, Cai J, Baker NE. Whole-Genome Sequencing and iPLEX MassARRAY Genotyping Map an EMS-induced Mutation Affecting Cell Competition in Drosophila melanogaster. G3 (Bethesda, Md.). PMID 27574103 DOI: 10.1534/g3.116.029421  0.01
2016 Baker NE, Kale A. Mutations in ribosomal proteins: Apoptosis, cell competition, and cancer. Molecular & Cellular Oncology. 3: e1029065. PMID 27308545 DOI: 10.1080/23723556.2015.1029065  0.04
2016 Sushko ML, Thomas DG, Pabit SA, Pollack L, Onufriev AV, Baker NA. The Role of Correlation and Solvation in Ion Interactions with B-DNA. Biophysical Journal. 110: 315-26. PMID 26789755 DOI: 10.1016/J.Bpj.2015.12.011  0.32
2016 McRae-Clark AL, Baker NL, Gray KM, Killeen T, Hartwell KJ, Simonian SJ. Vilazodone for Cannabis Dependence: A Randomized, Controlled Pilot Trial American Journal On Addictions. 25: 69-75. DOI: 10.1111/ajad.12324  0.04
2016 Yang X, Lei H, Baker NA, Lin G. Enhancing sparsity of Hermite polynomial expansions by iterative rotations Journal of Computational Physics. 307: 94-109. DOI: 10.1016/J.Jcp.2015.11.038  0.08
2016 Lipinski MJ, Escarcega RO, Baker NC, Benn HA, Gaglia MA, Torguson R, Waksman R. Scaffold Thrombosis after Percutaneous Coronary Intervention with ABSORB Bioresorbable Vascular Scaffold A Systematic Review and Meta-Analysis Jacc: Cardiovascular Interventions. 9: 12-24. DOI: 10.1016/j.jcin.2015.09.024  0.04
2015 Lei H, Yang X, Zheng B, Lin G, Baker NA. CONSTRUCTING SURROGATE MODELS OF COMPLEX SYSTEMS WITH ENHANCED SPARSITY: QUANTIFYING THE INFLUENCE OF CONFORMATIONAL UNCERTAINTY IN BIOMOLECULAR SOLVATION. Multiscale Modeling & Simulation : a Siam Interdisciplinary Journal. 13: 1327-1353. PMID 26766929 DOI: 10.1137/140981587  0.32
2015 Escárcega RO, Baker NC, Lipinski MJ. Getting a job after cardiovascular fellowship: A reality check Cardiovascular Revascularization Medicine. 16: 478-479. PMID 26697602 DOI: 10.1016/j.carrev.2015.11.003  0.04
2015 Yerasi C, Baker NC, Jonnalagadda AK, Torguson R, Singh S, Vies J, Waksman R. Assessment of hypertension control and clinical course of patients excluded from the SYMPLICITY HTN-3 trial. Journal of the American Society of Hypertension : Jash. 9: 959-65. PMID 26687550 DOI: 10.1016/j.jash.2015.10.002  0.04
2015 Baker N, Sohn J, Tuan RS. Promotion of human mesenchymal stem cell osteogenesis by PI3-kinase/Akt signaling, and the influence of caveolin-1/cholesterol homeostasis. Stem Cell Research & Therapy. 6: 238. PMID 26626726 DOI: 10.1186/S13287-015-0225-8  0.01
2015 Lipinski MJ, Benedetto U, Escarcega RO, Biondi-Zoccai G, Lhermusier T, Baker NC, Torguson R, Brewer HB, Waksman R. The impact of proprotein convertase subtilisin-kexin type 9 serine protease inhibitors on lipid levels and outcomes in patients with primary hypercholesterolaemia: a network meta-analysis. European Heart Journal. PMID 26578202 DOI: 10.1093/eurheartj/ehv563  0.04
2015 Wang LH, Baker NE. E Proteins and ID Proteins: Helix-Loop-Helix Partners in Development and Disease. Developmental Cell. 35: 269-80. PMID 26555048 DOI: 10.1016/j.devcel.2015.10.019  1
2015 Baker NJ, Beattie J. How Your Smartphone or Tablet Can Make You a Smarter Doc. Minnesota Medicine. 98: 31-4. PMID 26455035  0.01
2015 McRae-Clark AL, Baker NL, Gray KM, Killeen TK, Wagner AM, Brady KT, DeVane CL, Norton J. Buspirone treatment of cannabis dependence: A randomized, placebo-controlled trial. Drug and Alcohol Dependence. PMID 26386827 DOI: 10.1016/j.drugalcdep.2015.08.013  0.04
2015 Escárcega RO, Magalhaes MA, Baker NC, Lipinski MJ, Minha S, Torguson R, Chen F, Satler LF, Pichard AD, Waksman R. Does the disparity in baseline characteristics of patients undergoing transcatheter aortic valve replacement with 23 mm vs. 26 mm valves impact clinical outcome? Catheterization and Cardiovascular Interventions : Official Journal of the Society For Cardiac Angiography & Interventions. PMID 26257081 DOI: 10.1002/ccd.25967  0.04
2015 Hrycaj SM, Dye BR, Baker NC, Larsen BM, Burke AC, Spence JR, Wellik DM. Hox5 Genes Regulate the Wnt2/2b-Bmp4-Signaling Axis during Lung Development. Cell Reports. 12: 903-12. PMID 26235626 DOI: 10.1016/J.Celrep.2015.07.020  0.01
2015 Flanagan JC, Baker NL, McRae-Clark AL, Brady KT, Moran-Santa Maria MM. Effects of adverse childhood experiences on the association between intranasal oxytocin and social stress reactivity among individuals with cocaine dependence. Psychiatry Research. 229: 94-100. PMID 26231584 DOI: 10.1016/j.psychres.2015.07.064  0.04
2015 Black JL, Harrell JC, Leisner TM, Fellmeth MJ, George SD, Reinhold D, Baker NM, Jones CD, Der CJ, Perou CM, Parise LV. CIB1 depletion impairs cell survival and tumor growth in triple-negative breast cancer. Breast Cancer Research and Treatment. PMID 26105795 DOI: 10.1007/S10549-015-3458-4  0.04
2015 Waksman R, Baker NC, Lhermusier T. Reply: To PMID 25728646. The American Journal of Cardiology. 116: 494-5. PMID 26092275 DOI: 10.1016/j.amjcard.2015.05.032  0.04
2015 Harper B, Thomas D, Chikkagoudar S, Baker N, Tang K, Heredia-Langner A, Lins R, Harper S. Comparative hazard analysis and toxicological modeling of diverse nanomaterials using the embryonic zebrafish (EZ) metric of toxicity. Journal of Nanoparticle Research : An Interdisciplinary Forum For Nanoscale Science and Technology. 17: 250. PMID 26069453 DOI: 10.1007/S11051-015-3051-0  0.32
2015 Qin J, Theis KA, Barbour KE, Helmick CG, Baker NA, Brady TJ. Impact of arthritis and multiple chronic conditions on selected life domains - United States, 2013. Mmwr. Morbidity and Mortality Weekly Report. 64: 578-82. PMID 26042649  0.01
2015 Graf FE, Baker N, Munday JC, de Koning HP, Horn D, Mäser P. Chimerization at the AQP2-AQP3 locus is the genetic basis of melarsoprol-pentamidine cross-resistance in clinical Trypanosoma brucei gambiense isolates. International Journal For Parasitology. Drugs and Drug Resistance. 5: 65-8. PMID 26042196 DOI: 10.1016/j.ijpddr.2015.04.002  0.01
2015 McRae-Clark AL, Baker NL, Sonne SC, DeVane CL, Wagner A, Norton J. Concordance of direct and indirect measures of medication adherence in a treatment trial for cannabis dependence. Journal of Substance Abuse Treatment. PMID 26028133 DOI: 10.1016/j.jsat.2015.05.002  0.04
2015 Pan W, Daily M, Baker NA. Numerical calculation of protein-ligand binding rates through solution of the Smoluchowski equation using smoothed particle hydrodynamics. Bmc Biophysics. 8: 7. PMID 25995835 DOI: 10.1186/S13628-015-0021-Y  0.01
2015 Hunt KJ, Baker NL, Cleary PA, Klein R, Virella G, Lopes-Virella MF. Longitudinal Association Between Endothelial Dysfunction, Inflammation, and Clotting Biomarkers With Subclinical Atherosclerosis in Type 1 Diabetes: An Evaluation of the DCCT/EDIC Cohort. Diabetes Care. 38: 1281-9. PMID 25852210 DOI: 10.2337/Dc14-2877  0.04
2015 Koifman E, Magalhaes MA, Ben-Dor I, Kiramijyan S, Escarcega RO, Fang C, Torguson R, Okubagzi P, Negi SI, Baker NC, Minha S, Corso PJ, Shults C, Satler LF, Pichard AD, et al. Impact of pre-procedural serum albumin levels on outcome of patients undergoing transcatheter aortic valve replacement. The American Journal of Cardiology. 115: 1260-4. PMID 25759105 DOI: 10.1016/j.amjcard.2015.02.009  0.04
2015 Lhermusier T, Lipinski MJ, Tantry US, Escarcega RO, Baker N, Bliden KP, Magalhaes MA, Ota H, Tian W, Pendyala L, Minha S, Chen F, Torguson R, Gurbel PA, Waksman R. Meta-analysis of direct and indirect comparison of ticagrelor and prasugrel effects on platelet reactivity. The American Journal of Cardiology. 115: 716-23. PMID 25728845 DOI: 10.1016/j.amjcard.2014.12.029  0.04
2015 Lhermusier T, Baker NC, Waksman R. Overview of the 2014 Food and Drug Administration Cardiovascular and Renal Drugs Advisory Committee meeting regarding cangrelor. The American Journal of Cardiology. 115: 1154-61. PMID 25728646 DOI: 10.1016/j.amjcard.2015.01.551  0.04
2015 Gray KM, McClure EA, Baker NL, Hartwell KJ, Carpenter MJ, Saladin ME. An exploratory short-term double-blind randomized trial of varenicline versus nicotine patch for smoking cessation in women. Addiction (Abingdon, England). 110: 1027-34. PMID 25727442 DOI: 10.1111/Add.12895  0.04
2015 Brown CW, Lakin MR, Fabry-Wood A, Horwitz EK, Baker NA, Stefanovic D, Graves SW. A unified sensor architecture for isothermal detection of double-stranded DNA, oligonucleotides, and small molecules. Chembiochem : a European Journal of Chemical Biology. 16: 725-30. PMID 25663617 DOI: 10.1002/Cbic.201402615  0.01
2015 Roten A, Baker NL, Gray KM. Cognitive performance in a placebo-controlled pharmacotherapy trial for youth with marijuana dependence. Addictive Behaviors. 45: 119-23. PMID 25661990 DOI: 10.1016/j.addbeh.2015.01.013  0.04
2015 Kale A, Li W, Lee CH, Baker NE. Apoptotic mechanisms during competition of ribosomal protein mutant cells: roles of the initiator caspases Dronc and Dream/Strica. Cell Death and Differentiation. 22: 1300-12. PMID 25613379 DOI: 10.1038/cdd.2014.218  1
2015 Wang LH, Baker NE. Salvador-Warts-Hippo pathway in a developmental checkpoint monitoring helix-loop-helix proteins. Developmental Cell. 32: 191-202. PMID 25579975 DOI: 10.1016/j.devcel.2014.12.002  1
2015 Glover L, Alsford S, Baker N, Turner DJ, Sanchez-Flores A, Hutchinson S, Hertz-Fowler C, Berriman M, Horn D. Genome-scale RNAi screens for high-throughput phenotyping in bloodstream-form African trypanosomes. Nature Protocols. 10: 106-33. PMID 25502887 DOI: 10.1038/Nprot.2015.005  0.01
2015 Rajab HA, Baker NL, Hunt KJ, Klein R, Cleary PA, Lachin J, Virella G, Lopes-Virella MF. The predictive role of markers of Inflammation and endothelial dysfunction on the course of diabetic retinopathy in type 1 diabetes. Journal of Diabetes and Its Complications. 29: 108-14. PMID 25441222 DOI: 10.1016/J.Jdiacomp.2014.08.004  0.04
2015 Fullard JF, Baker NE. Signaling by the engulfment receptor draper: a screen in Drosophila melanogaster implicates cytoskeletal regulators, Jun N-terminal Kinase, and Yorkie. Genetics. 199: 117-34. PMID 25395664 DOI: 10.1534/genetics.114.172544  1
2015 Moran-Santa Maria MM, Baker NL, Ramakrishnan V, Brady KT, McRae-Clark A. Impact of acute guanfacine administration on stress and cue reactivity in cocaine-dependent individuals. The American Journal of Drug and Alcohol Abuse. 41: 146-52. PMID 25140866 DOI: 10.3109/00952990.2014.945590  0.04
2015 Evans SW, Baker EM, Baker NE, Cilliers D. Current distribution and population size of the Blue Swallow Hirundo atrocaerulea in the southern Tanzanian highlands Ostrich. 1-10. DOI: 10.2989/00306525.2015.1110843  0.01
2015 Baker NJ, Dieter CD, Bakker KK. Reproductive success of colonial tree-nesting waterbirds in prairie pothole wetlands and rivers throughout northeastern South Dakota American Midland Naturalist. 174: 132-149. DOI: 10.1674/0003-0031-174.1.132  0.01
2015 Baker NJ, Kaartinen R, Roslin T, Stouffer DB. Species' roles in food webs show fidelity across a highly variable oak forest Ecography. 38: 130-139. DOI: 10.1111/Ecog.00913  0.01
2015 Ogada D, Shaw P, Beyers RL, Buij R, Murn C, Thiollay JM, Beale CM, Holdo RM, Pomeroy D, Baker N, Krüger SC, Botha A, Virani MZ, Monadjem A, Sinclair ARE. Another Continental Vulture Crisis: Africa's Vultures Collapsing toward Extinction Conservation Letters. DOI: 10.1111/Conl.12182  0.01
2015 Spargo CM, Mecrow BC, Widmer JD, Morton C, Baker NJ. Design and Validation of a Synchronous Reluctance Motor With Single Tooth Windings Ieee Transactions On Energy Conversion. 30: 795-805. DOI: 10.1109/TEC.2014.2384476  0.12
2015 Baker N, Hamilton G, Wilkes JM, Hutchinson S, Barrett MP, Horn D. Vacuolar ATPase depletion affects mitochondrial ATPase function, kinetoplast dependency, and drug sensitivity in trypanosomes Proceedings of the National Academy of Sciences of the United States of America. 112: 9112-9117. DOI: 10.1073/pnas.1505411112  0.01
2015 McClure EA, Baker NL, Carpenter MJ, Treiber FA, Gray KM. Attitudes and Interest in Technology-Based Treatment and the Remote Monitoring of Smoking among Adolescents and Emerging Adults Journal of Smoking Cessation. DOI: 10.1017/jsc.2015.15  0.04
2015 Baker NT, Pothérat A, Davoust L. Dimensionality, secondary flows and helicity in low-Rm MHD vortices Journal of Fluid Mechanics. 779: 325-350. DOI: 10.1017/jfm.2015.420  0.01
2015 Minha S, Magalhaes MA, Barbash IM, Ben-Dor I, Escarcega RO, Okubagzi PG, Baker NC, Chen F, Torguson R, Suddath WO, Satler LF, Pichard AD, Waksman R. The impact of diabetes mellitus on outcome of patients undergoing transcatheter aortic valve replacement Ijc Metabolic and Endocrine. 9: 54-60. DOI: 10.1016/j.ijcme.2015.05.023  0.04
2015 Blackmer AB, Konicek C, Baker N, Penzien C, Welch KB, Klein KC. Impact on student knowledge following implementation of a pediatric core curriculum during a pediatric APPE: Pilot data Currents in Pharmacy Teaching and Learning. DOI: 10.1016/j.cptl.2015.09.016  0.01
2015 Baker NC, Barbash IM, Waksman R. Novoste: The brachytherapy approach to renal denervation Renal Denervation: a New Approach to Treatment of Resistant Hypertension. 101-105. DOI: 10.1007/978-1-4471-5223-1_12  0.04
2015 Baker ND, Samonas S, Artello K. (Not) welcome to the US: Hyper-Ebola and the crisis of misinformation Iscram 2015 Conference Proceedings - 12th International Conference On Information Systems For Crisis Response and Management 0.01
2014 Thomas DG, Chikkagoudar S, Heredia-Langer A, Tardiff MF, Xu Z, Hourcade DE, Pham CT, Lanza GM, Weinberger KQ, Baker NA. Physicochemical signatures of nanoparticle-dependent complement activation. Computational Science & Discovery. 7: 015003. PMID 25254068 DOI: 10.1088/1749-4699/7/1/015003  0.32
2014 Baker NE, Jenny A. Metabolism and the other fat: a protocadherin in mitochondria. Cell. 158: 1240-1. PMID 25215484 DOI: 10.1016/J.Cell.2014.08.039  1
2014 Tolokh IS, Pabit SA, Katz AM, Chen Y, Drozdetski A, Baker N, Pollack L, Onufriev AV. Why double-stranded RNA resists condensation. Nucleic Acids Research. 42: 10823-31. PMID 25123663 DOI: 10.1093/Nar/Gku756  0.32
2014 Ihle KE, Baker NA, Amdam GV. Insulin-like peptide response to nutritional input in honey bee workers. Journal of Insect Physiology. 69: 49-55. PMID 24952326 DOI: 10.1016/J.Jinsphys.2014.05.026  0.08
2014 Daily MD, Olsen BN, Schlesinger PH, Ory DS, Baker NA. Improved Coarse-Grained Modeling of Cholesterol-Containing Lipid Bilayers. Journal of Chemical Theory and Computation. 10: 2137-2150. PMID 24910542 DOI: 10.1021/Ct401028G  0.32
2014 Baker NE, Li K, Quiquand M, Ruggiero R, Wang LH. Eye development. Methods (San Diego, Calif.). 68: 252-9. PMID 24784530 DOI: 10.1016/j.ymeth.2014.04.007  1
2014 Bielska AA, Olsen BN, Gale SE, Mydock-McGrane L, Krishnan K, Baker NA, Schlesinger PH, Covey DF, Ory DS. Side-chain oxysterols modulate cholesterol accessibility through membrane remodeling. Biochemistry. 53: 3042-51. PMID 24758724 DOI: 10.1021/Bi5000096  0.32
2014 Pham CT, Thomas DG, Beiser J, Mitchell LM, Huang JL, Senpan A, Hu G, Gordon M, Baker NA, Pan D, Lanza GM, Hourcade DE. Application of a hemolysis assay for analysis of complement activation by perfluorocarbon nanoparticles. Nanomedicine : Nanotechnology, Biology, and Medicine. 10: 651-60. PMID 24211337 DOI: 10.1016/J.Nano.2013.10.012  0.32
2014 Gosink LJ, Hogan EA, Pulsipher TC, Baker NA. Bayesian model aggregation for ensemble-based estimates of protein pKa values. Proteins. 82: 354-63. PMID 23946048 DOI: 10.1002/prot.24390  0.32
2014 Baker NL, Miller KA, Newgreen DF, Farlie PG. Olfr603, an orphan olfactory receptor, is expressed in multiple specific embryonic tissues Gene Expression Patterns. DOI: 10.1016/j.gep.2015.06.002  0.01
2013 Harper SL, Hutchison JE, Baker N, Ostraat M, Tinkle S, Steevens J, Hoover MD, Adamick J, Rajan K, Gaheen S, Cohen Y, Nel A, Cachau RE, Tuominen M. Nanoinformatics workshop report: Current resources, community needs, and the proposal of a collaborative framework for data sharing and information integration. Computational Science & Discovery. 6: 14008. PMID 24454543 DOI: 10.1088/1749-4699/6/1/014008  0.32
2013 Daily MD, Chun J, Heredia-Langner A, Wei G, Baker NA. Origin of parameter degeneracy and molecular shape relationships in geometric-flow calculations of solvation free energies. The Journal of Chemical Physics. 139: 204108. PMID 24289345 DOI: 10.1063/1.4832900  0.32
2013 Xu B, Hrycaj SM, McIntyre DC, Baker NC, Takeuchi JK, Jeannotte L, Gaber ZB, Novitch BG, Wellik DM. Hox5 interacts with Plzf to restrict Shh expression in the developing forelimb. Proceedings of the National Academy of Sciences of the United States of America. 110: 19438-43. PMID 24218595 DOI: 10.1073/Pnas.1315075110  0.01
2013 Olsen BN, Bielska AA, Lee T, Daily MD, Covey DF, Schlesinger PH, Baker NA, Ory DS. The structural basis of cholesterol accessibility in membranes. Biophysical Journal. 105: 1838-47. PMID 24138860 DOI: 10.1016/J.Bpj.2013.08.042  0.32
2013 Münch D, Baker N, Rasmussen EM, Shah AK, Kreibich CD, Heidem LE, Amdam GV. Obtaining specimens with slowed, accelerated and reversed aging in the honey bee model. Journal of Visualized Experiments : Jove. PMID 24022601 DOI: 10.3791/50550  0.08
2013 Wang Y, Baker N, Amdam GV. RNAi-mediated double gene knockdown and gustatory perception measurement in honey bees (Apis mellifera). Journal of Visualized Experiments : Jove. PMID 23912844 DOI: 10.3791/50446  0.08
2013 Baker NE. Developmental Regulation of Nucleolus Size during Drosophila Eye Differentiation Plos One. 8. PMID 23472166 DOI: 10.1371/journal.pone.0058266  1
2013 Baker NJ, Bancroft BA, Garcia TS. A meta-analysis of the effects of pesticides and fertilizers on survival and growth of amphibians. The Science of the Total Environment. 449: 150-6. PMID 23422494 DOI: 10.1016/j.scitotenv.2013.01.056  0.01
2012 Ruggiero R, Kale A, Thomas B, Baker NE. Mitosis in Neurons: Roughex and APC/C Maintain Cell Cycle Exit to Prevent Cytokinetic and Axonal Defects in Drosophila Photoreceptor Neurons Plos Genetics. 8. PMID 23209426 DOI: 10.1371/journal.pgen.1003049  1
2012 Bhattacharya A, Baker NE. The role of the bHLH protein hairy in morphogenetic furrow progression in the developing Drosophila eye. Plos One. 7: e47503. PMID 23118874 DOI: 10.1371/journal.pone.0047503  1
2011 Bhattacharya A, Baker NE. A network of broadly expressed hlh genes regulates tissue-specific cell fates Cell. 147: 881-892. PMID 22078884 DOI: 10.1016/j.cell.2011.08.055  1
2011 Lubensky DK, Pennington MW, Shraiman BI, Baker NE. A dynamical model of ommatidial crystal formation. Proceedings of the National Academy of Sciences of the United States of America. 108: 11145-50. PMID 21690337 DOI: 10.1073/Pnas.1015302108  1
2011 Baker NE, Firth LC. Retinal determination genes function along with cell-cell signals to regulate Drosophila eye development: Examples of multi-layered regulation by master regulators Bioessays. 33: 538-546. PMID 21607995 DOI: 10.1002/bies.201000131  1
2011 Baker NE. Proximodistal patterning in the drosophila leg: Models and mutations Genetics. 187: 1003-1010. PMID 21478472 DOI: 10.1534/genetics.111.127191  1
2011 Baker NE. Cell competition Current Biology. 21: R11-R15. PMID 21215926 DOI: 10.1016/j.cub.2010.11.030  1
2010 Sidyelyeva G, Wegener C, Schoenfeld BP, Bell AJ, Baker NE, McBride SMJ, Fricker LD. Individual carboxypeptidase D domains have both redundant and unique functions in Drosophila development and behavior Cellular and Molecular Life Sciences. 67: 2991-3004. PMID 20386952 DOI: 10.1007/S00018-010-0369-8  1
2010 Firth LC, Bhattacharya A, Baker NE. Cell cycle arrest by a gradient of Dpp signaling during Drosophila eye development Bmc Developmental Biology. 10. PMID 20214806 DOI: 10.1186/1471-213X-10-28  1
2009 Li W, Kale A, Baker NE. Oriented Cell Division as a Response to Cell Death and Cell Competition Current Biology. 19: 1821-1826. PMID 19853449 DOI: 10.1016/j.cub.2009.09.023  1
2009 Baker NE, Bhattacharya A, Firth LC. Regulation of Hh signal transduction as Drosophila eye differentiation progresses Developmental Biology. 335: 356-366. PMID 19761763 DOI: 10.1016/j.ydbio.2009.09.008  1
2009 Fullard JF, Kale A, Baker NE. Clearance of apoptotic corpses Apoptosis. 14: 1029-1037. PMID 19291407 DOI: 10.1007/s10495-009-0335-9  1
2009 Firth LC, Baker NE. Retinal determination genes as targets and possible effectors of extracellular signals Developmental Biology. 327: 366-375. PMID 19135045 DOI: 10.1016/j.ydbio.2008.12.021  1
2009 Bhattacharya A, Baker NE. The HLH protein Extramacrochaetae is required for R7 cell and cone cell fates in the Drosophila eye Developmental Biology. 327: 288-300. PMID 19118542 DOI: 10.1016/j.ydbio.2008.11.037  1
2009 Firth LC, Baker NE. Corrigendum to "Spitz from the retina regulates genes transcribed in the second mitotic wave, peripodial epithelium, glia and plasmatocytes of the Drosophila eye imaginal disc" [Dev. Biol. 307 (2007) 521-538] (DOI:10.1016/j.ydbio.2007.04.037) Developmental Biology. 325: 307. DOI: 10.1016/j.ydbio.2008.10.008  1
2008 Baker NE, Li W. Cell competition and its possible relation to cancer Cancer Research. 68: 5505-5507. PMID 18632598 DOI: 10.1158/0008-5472.CAN-07-6348  1
2008 Bancroft BA, Baker NJ, Blaustein AR. A meta-analysis of the effects of ultraviolet B radiation and its synergistic interactions with pH, contaminants, and disease on amphibian survival. Conservation Biology : the Journal of the Society For Conservation Biology. 22: 987-96. PMID 18616747 DOI: 10.1111/j.1523-1739.2008.00966.x  0.01
2008 Pei Z, Baker NE. Competition between Delta and the Abruptex domain of Notch Bmc Developmental Biology. 8. PMID 18208612 DOI: 10.1186/1471-213X-8-4  1
2007 Baker NE. Patterning signals and proliferation in Drosophila imaginal discs Current Opinion in Genetics and Development. 17: 287-293. PMID 17624759 DOI: 10.1016/j.gde.2007.05.005  1
2007 Li W, Baker NE. Engulfment Is Required for Cell Competition Cell. 129: 1215-1225. PMID 17574031 DOI: 10.1016/j.cell.2007.03.054  1
2007 Firth LC, Baker NE. Spitz from the retina regulates genes transcribed in the second mitotic wave, peripodial epithelium, glia and plasmatocytes of the Drosophila eye imaginal disc Developmental Biology. 307: 521-538. PMID 17553483 DOI: 10.1016/j.ydbio.2007.04.037  1
2007 Tyler DM, Baker NE. Expanded and fat regulate growth and differentiation in the Drosophila eye through multiple signaling pathways Developmental Biology. 305: 187-201. PMID 17359963 DOI: 10.1016/j.ydbio.2007.02.004  1
2007 Bancroft BA, Baker NJ, Blaustein AR. Effects of UVB radiation on marine and freshwater organisms: a synthesis through meta-analysis. Ecology Letters. 10: 332-45. PMID 17355571 DOI: 10.1111/j.1461-0248.2007.01022.x  0.01
2007 Tyler DM, Li W, Zhuo N, Pellock B, Baker NE. Genes affecting cell competition in Drosophila. Genetics. 175: 643-57. PMID 17110495 DOI: 10.1534/Genetics.106.061929  1
2007 Baker NE, Li W. The active role of corpse engulfment pathways during cell competition Fly. 1: e1-e5.  1
2006 Sidyelyeva G, Baker NE, Fricker LD. Characterization of the molecular basis of the Drosophila mutations in carboxypeptidase D: Effect on enzyme activity and expression Journal of Biological Chemistry. 281: 13844-13852. PMID 16556608 DOI: 10.1074/Jbc.M513499200  1
2006 Yang L, Baker NE. Notch activity opposes ras-induced differentiation during the second mitotic wave of the developing Drosophila eye Bmc Developmental Biology. 6. DOI: 10.1186/1471-213X-6-8  1
2005 Firth LC, Li W, Zhang H, Baker NE. Analyses of RAS Regulation of Eye Development in Drosophila melanogaster Methods in Enzymology. 407: 711-721. PMID 16757364 DOI: 10.1016/S0076-6879(05)07056-4  1
2005 Firth LC, Baker NE. Extracellular signals responsible for spatially regulated proliferation in the differentiating Drosophila eye Developmental Cell. 8: 541-551. PMID 15809036 DOI: 10.1016/j.devcel.2005.01.017  1
2004 Baker NE. Atonal points the way - Protein-protein interactions and developmental biology Developmental Cell. 7: 632-634. PMID 15525524 DOI: 10.1016/j.devcel.2004.10.010  1
2004 Li Y, Baker NE. The roles of cis-inactivation by Notch ligands and of neuralized during eye and bristle patterning in Drosophila. Bmc Developmental Biology. 4: 5. PMID 15113404 DOI: 10.1186/1471-213X-4-5  1
2003 Shi W, Stampas A, Zapata C, Baker NE. The pineapple eye Gene Is Required for Survival of Drosophila Imaginal Disc Cells Genetics. 165: 1869-1879. PMID 14704172  1
2003 Firth LC, Baker NE. EGF Receptor Signaling: A Prickly Proposition Current Biology. 13: R773-R774. PMID 14521857 DOI: 10.1016/j.cub.2003.09.020  1
2003 Fu W, Baker NE. Deciphering synergistic and redundant roles of Hedgehog, Decapentaplegic and Delta that drive the wave of differentiation in Drosophila eye development Development. 130: 5229-5239. PMID 12954721 DOI: 10.1242/dev.00764  1
2003 Li Y, Lei L, Irvine KD, Baker NE, Li L. Notch activity in neural cells triggered by a mutant allele with altered glycosylation. Development (Cambridge, England). 130: 2829-40. PMID 12756168 DOI: 10.1242/dev.00498  1
2003 Li Y, Fetchko M, Lai ZC, Baker NE. Scabrous and Gp150 are endosomal proteins that regulate Notch activity. Development (Cambridge, England). 130: 2819-27. PMID 12756167 DOI: 10.1242/dev.00495  1
2003 Yang L, Baker NE. Cell cycle withdrawal, progression, and cell survival regulation by EGFR and its effectors in the differentiating Drosophila eye Developmental Cell. 4: 359-369. PMID 12636917 DOI: 10.1016/S1534-5807(03)00059-5  1
2003 Tyler D, Baker NE. Size isn't everything Bioessays. 25: 5-8. PMID 12508275 DOI: 10.1002/bies.10211  1
2002 Baker NE. NOTCH and the patterning of ommatidial founder cells in the developing Drosophila eye Results and Problems in Cell Differentiation. 37: 35-58. PMID 25707068  1
2002 Yu SY, Yoo SJ, Yang L, Zapata C, Srinivasan A, Hay BA, Baker NE. A pathway of signals regulating effector and initiator caspases in the developing Drosophila eye. Development (Cambridge, England). 129: 3269-78. PMID 12070100  1
2001 Baker NE. Cell proliferation, survival, and death in the Drosophila eye Seminars in Cell and Developmental Biology. 12: 499-507. PMID 11735386 DOI: 10.1006/scdb.2001.0274  1
2001 Baker NE. Master regulatory genes; telling them what to do Bioessays. 23: 763-766. PMID 11536287 DOI: 10.1002/bies.1110  1
2001 Li Y, Baker NE. Proneural enhancement by Notch overcomes suppressor-of-hairless repressor function in the developing Drosophila eye Current Biology. 11: 330-338. PMID 11267869 DOI: 10.1016/S0960-9822(01)00093-8  1
2001 Baker NE, Yu SY. The EGF receptor defines domains of cell cycle progression and survival to regulate cell number in the developing Drosophila eye Cell. 104: 699-708. PMID 11257224  1
2001 Yang L, Baker NE. Role of the EGFR/RAS/Raf pathway in specification of photoreceptor cells in the Drosophila retina Development. 128: 1183-1191. PMID 11245584  1
2000 Lee EC, Yu SY, Baker NE. The Scabrous protein can act as an extracellular antagonist of Notch signaling in the Drosophila wing Current Biology. 10: 931-934. PMID 10959842 DOI: 10.1016/S0960-9822(00)00622-9  1
2000 Baker NE. Notch signaling in the nervous system. Pieces still missing from the puzzle Bioessays. 22: 264-273. PMID 10684586 DOI: 10.1002/(SICI)1521-1878(200003)22:3<264::AID-BIES8>3.0.CO;2-M  1
1999 Lesokhin AM, Yu SY, Katz J, Baker NE. Several levels of EGF receptor signaling during photoreceptor specification in wild-type, Ellipse, and null mutant Drosophila Developmental Biology. 205: 129-144. PMID 9882502 DOI: 10.1006/dbio.1998.9121  1
1998 Lee EC, Yu SY, Hu X, Mlodzik M, Baker NE. Functional analysis of the fibrinogen-related scabrous gene from Drosophila melanogaster identifies potential effector and stimulatory protein domains. Genetics. 150: 663-73. PMID 9755198  1
1998 Ligoxygakis P, Yu SY, Delidakis C, Baker NE. A subset of notch functions during Drosophila eye development require Su(H) and the E(spl) gene complex. Development (Cambridge, England). 125: 2893-900. PMID 9655811  1
1998 Baker NE, Yu SY. The R8-photoreceptor equivalence group in Drosophila: Fate choice precedes regulated Delta transcription and is independent of Notch gene dose Mechanisms of Development. 74: 3-14. PMID 9651468 DOI: 10.1016/S0925-4773(98)00054-9  1
1997 Han JD, Baker NE, Rubin CS. Molecular characterization of a novel A kinase anchor protein from Drosophila melanogaster. The Journal of Biological Chemistry. 272: 26611-9. PMID 9334242 DOI: 10.1074/jbc.272.42.26611  1
1997 Baker NE, Yu SY. Proneural function of neurogenic genes in the developing Drosophila eye Current Biology. 7: 122-132. PMID 9016706  1
1996 Baker NE, Yu S, Han D. Evolution of proneural atonal expression during distinct regulatory phases in the developing Drosophila eye Current Biology. 6: 1290-1301. PMID 8939576  1
1996 Lee EC, Baker NE. GP300SCA is not a high affinity Notch ligand Biochemical and Biophysical Research Communications. 225: 720-725. PMID 8780680 DOI: 10.1006/bbrc.1996.1241  1
1996 Lee EC, Hu X, Yu SY, Baker NE. The scabrous gene encodes a secreted glycoprotein dimer and regulates proneural development in Drosophila eyes Molecular and Cellular Biology. 16: 1179-1188. PMID 8622662  1
1995 Hu X, Lee EC, Baker NE. Molecular analysis of scabrous mutant alleles from Drosophila melanogaster indicates a secreted protein with two functional domains Genetics. 141: 607-617. PMID 8647397  1
1995 Baker NE, Zitron AE. Drosophila eye development: Notch and Delta amplify a neurogenic pattern conferred on the morphogenetic furrow by scabrous. Mechanisms of Development. 49: 173-89. PMID 7734391 DOI: 10.1016/0925-4773(94)00314-D  1
1992 Baker NE, Moses K, Nakahara D, Ellis MC, Carthew RW, Rubin GM. Mutations on the second chromosome affecting the Drosophila eye. Journal of Neurogenetics. 8: 85-100. PMID 1634999 DOI: 10.3109/01677069209084154  1
1992 Baker NE, Rubin GM. Ellipse mutations in the Drosophila homologue of the EGF receptor affect pattern formation, cell division, and cell death in eye imaginal discs. Developmental Biology. 150: 381-96. PMID 1551482 DOI: 10.1016/0012-1606(92)90250-K  1
1990 Baker NE, Mlodzik M, Rubin GM. Spacing differentiation in the developing Drosophila eye: a fibrinogen-related lateral inhibitor encoded by scabrous. Science (New York, N.Y.). 250: 1370-7. PMID 2175046 DOI: 10.1126/Science.2175046  1
1990 Mlodzik M, Baker NE, Rubin GM. Isolation and expression of scabrous, a gene regulating neurogenesis in Drosophila. Genes & Development. 4: 1848-61. PMID 2125959 DOI: 10.1101/Gad.4.11.1848  1
1989 Baker NE, Rubin GM. Effect on eye development of dominant mutations in Drosophila homologue of the EGF receptor. Nature. 340: 150-3. PMID 2500601 DOI: 10.1038/340150a0  1
1988 Baker NE. Localization of transcripts from the wingless gene in whole Drosophila embryos Development. 103: 289-298. PMID 3224555  1
1988 Arias AM, Baker NE, Ingham PW. Role of segment polarity genes in the definition and maintenance of cell states in the Drosophila embryo Development. 103: 157-170. PMID 3197626  1
1988 Baker NE. Transcription of the segment-polarity gene wingless in the imaginal discs of Drosophila, and the phenotype of a pupal-lethal wg mutation Development. 102: 489-497. PMID 3181031  1
1988 Baker NE. Embryonic and imaginal requirements for wingless, a segment-polarity gene in Drosophila Developmental Biology. 125: 96-108. PMID 3119404 DOI: 10.1016/0012-1606(88)90062-0  1
1988 Ingham PW, Baker NE, Martinez-Arias A. Regulation of segment polarity genes in the Drosophila blastoderm by fushi tarazu and even skipped. Nature. 331: 73-5. PMID 2893285 DOI: 10.1038/331073a0  1
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