Artyom Kopp - Publications

Affiliations: 
Evolution and Ecology University of California, Davis, Davis, CA 
Area:
Organization of genetic regulatory circuits

66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Luecke DM, Kopp A. Sex-specific evolution of relative leg size in Drosophila prolongata results from changes in the intersegmental coordination of tissue growth. Evolution; International Journal of Organic Evolution. PMID 31595502 DOI: 10.1111/evo.13847  1
2019 Wexler J, Delaney EK, Belles X, Schal C, Wada-Katsumata A, Amicucci MJ, Kopp A. Hemimetabolous insects elucidate the origin of sexual development via alternative splicing. Elife. 8. PMID 31478483 DOI: 10.7554/eLife.47490  0.48
2019 Rice GR, Barmina O, Luecke D, Hu K, Arbeitman M, Kopp A. Modular tissue-specific regulation of underpins sexually dimorphic development in . Development (Cambridge, England). PMID 31285355 DOI: 10.1242/dev.178285  0.52
2018 Gompel N, Kopp A. Drosophila (Sophophora) carrolli n. sp., a new species from Brunei, closely related to Drosophila (Sophophora) rhopaloa Bock Wheeler, 1972 (Diptera: Drosophilidae). Zootaxa. 4434: 502-510. PMID 30313176 DOI: 10.11646/zootaxa.4434.3.6  0.48
2018 Eksi SE, Barmina O, McCallough CL, Kopp A, Orenic TV. A Distalless-responsive enhancer of the Hox gene Sex combs reduced is required for segment- and sex-specific sensory organ development in Drosophila. Plos Genetics. 14: e1007320. PMID 29634724 DOI: 10.1371/journal.pgen.1007320  0.52
2018 Rice G, Barmina O, Hu K, Kopp A. Evolving doublesex expression correlates with the origin and diversification of male sexual ornaments in the Drosophila immigrans species group. Evolution & Development. PMID 29372584 DOI: 10.1111/ede.12249  0.52
2017 Allen SL, Delaney EK, Kopp A, Chenoweth SF. Single-Molecule Sequencing of the Drosophila serrata Genome. G3 (Bethesda, Md.). PMID 28143951 DOI: 10.1534/g3.116.037598  0.48
2016 Signor SA, Liu Y, Rebeiz M, Kopp A. Genetic Convergence in the Evolution of Male-Specific Color Patterns in Drosophila. Current Biology : Cb. PMID 27546578 DOI: 10.1016/j.cub.2016.07.034  0.68
2016 Yassin A, Delaney EK, Reddiex AJ, Seher TD, Bastide H, Appleton NC, Lack JB, David JR, Chenoweth SF, Pool JE, Kopp A. The pdm3 Locus Is a Hotspot for Recurrent Evolution of Female-Limited Color Dimorphism in Drosophila. Current Biology : Cb. PMID 27546577 DOI: 10.1016/j.cub.2016.07.016  0.48
2015 Aad G, Abbott B, Abdallah J, Abdinov O, Aben R, Abolins M, AbouZeid OS, Abramowicz H, Abreu H, Abreu R, Abulaiti Y, Acharya BS, Adamczyk L, Adams DL, Adelman J, ... ... Kopp AK, et al. Search for Dark Matter in Events with Missing Transverse Momentum and a Higgs Boson Decaying to Two Photons in pp Collisions at sqrt[s]=8 TeV with the ATLAS Detector. Physical Review Letters. 115: 131801. PMID 26451544 DOI: 10.1103/PhysRevLett.115.131801  0.68
2015 Hoang D, Kopp A, Chandler JA. Interactions between Drosophila and its natural yeast symbionts-Is Saccharomyces cerevisiae a good model for studying the fly-yeast relationship? Peerj. 3: e1116. PMID 26336636 DOI: 10.7717/peerj.1116  1
2015 Aad G, Abbott B, Abdallah J, Abdinov O, Aben R, Abolins M, AbouZeid OS, Abramowicz H, Abreu H, Abreu R, Abulaiti Y, Acharya BS, Adamczyk L, Adams DL, Adelman J, ... ... Kopp AK, et al. Search for heavy long-lived multi-charged particles in pp collisions at [Formula: see text] TeV using the ATLAS detector. The European Physical Journal. C, Particles and Fields. 75: 362. PMID 26300688 DOI: 10.1140/epjc/s10052-015-3534-2  0.68
2014 Chen ZX, Sturgill D, Qu J, Jiang H, Park S, Boley N, Suzuki AM, Fletcher AR, Plachetzki DC, FitzGerald PC, Artieri CG, Atallah J, Barmina O, Brown JB, Blankenburg KP, ... ... Kopp A, et al. Comparative validation of the D. melanogaster modENCODE transcriptome annotation. Genome Research. 24: 1209-23. PMID 24985915 DOI: 10.1101/gr.159384.113  0.64
2014 Arbeitman MN, Kopp A, L Siegal M, Van Doren M. The genetics of sex: exploring differences. Genetics. 197: 527-9. PMID 24939993 DOI: 10.1534/genetics.114.165456  1
2014 Plachetzki DC, Sabrina Pankey M, Johnson BR, Ronne EJ, Kopp A, Grosberg RK. Gene co-expression modules underlying polymorphic and monomorphic zooids in the colonial hydrozoan, Hydractinia symbiolongicarpus. Integrative and Comparative Biology. 54: 276-83. PMID 24935986 DOI: 10.1093/icb/icu080  1
2014 Wexler JR, Plachetzki DC, Kopp A. Pan-metazoan phylogeny of the DMRT gene family: a framework for functional studies. Development Genes and Evolution. 224: 175-81. PMID 24903586 DOI: 10.1007/s00427-014-0473-0  1
2014 Atallah J, Teixeira L, Salazar R, Zaragoza G, Kopp A. The making of a pest: the evolution of a fruit-penetrating ovipositor in Drosophila suzukii and related species. Proceedings. Biological Sciences / the Royal Society. 281: 20132840. PMID 24573846 DOI: 10.1098/rspb.2013.2840  1
2014 Atallah J, Vurens G, Mavong S, Mutti A, Hoang D, Kopp A. Sex-specific repression of dachshund is required for Drosophila sex comb development. Developmental Biology. 386: 440-7. PMID 24361261 DOI: 10.1016/j.ydbio.2013.12.017  1
2014 Bossuyt W, Chen CL, Chen Q, Sudol M, McNeill H, Pan D, Kopp A, Halder G. An evolutionary shift in the regulation of the Hippo pathway between mice and flies. Oncogene. 33: 1218-28. PMID 23563179 DOI: 10.1038/onc.2013.82  1
2013 Signor S, Seher T, Kopp A. Genomic resources for multiple species in the Drosophila ananassae species group. Fly. 7: 47-57. PMID 23639891 DOI: 10.4161/fly.22353  1
2013 Kopp A. Evolutionary genetics: big effect of a small RNA. Current Biology : Cb. 23: R247-9. PMID 23518058 DOI: 10.1016/j.cub.2013.02.029  1
2012 Kopp A. Evolutionary genetics: no coming back from neverland. Current Biology : Cb. 22: R1004-6. PMID 23218006 DOI: 10.1016/j.cub.2012.10.040  1
2012 Atallah J, Watabe H, Kopp A. Many ways to make a novel structure: a new mode of sex comb development in Drosophilidae. Evolution & Development. 14: 476-83. PMID 23134206 DOI: 10.1111/ede.12001  1
2012 Seher TD, Ng CS, Signor SA, Podlaha O, Barmina O, Kopp A. Genetic basis of a violation of Dollo's Law: re-evolution of rotating sex combs in Drosophila bipectinata. Genetics. 192: 1465-75. PMID 23086218 DOI: 10.1534/genetics.112.145524  1
2012 Chandler JA, Eisen JA, Kopp A. Yeast communities of diverse Drosophila species: comparison of two symbiont groups in the same hosts. Applied and Environmental Microbiology. 78: 7327-36. PMID 22885750 DOI: 10.1128/AEM.01741-12  1
2012 Kronforst MR, Barsh GS, Kopp A, Mallet J, Monteiro A, Mullen SP, Protas M, Rosenblum EB, Schneider CJ, Hoekstra HE. Unraveling the thread of nature's tapestry: the genetics of diversity and convergence in animal pigmentation. Pigment Cell & Melanoma Research. 25: 411-33. PMID 22578174 DOI: 10.1111/j.1755-148X.2012.01014.x  1
2012 Kopp A. Dmrt genes in the development and evolution of sexual dimorphism. Trends in Genetics : Tig. 28: 175-84. PMID 22425532 DOI: 10.1016/j.tig.2012.02.002  1
2012 Kopp A, McIntyre LM. Transcriptional network structure has little effect on the rate of regulatory evolution in yeast. Molecular Biology and Evolution. 29: 1899-905. PMID 20966117 DOI: 10.1093/molbev/msq283  1
2011 Kopp A. Drosophila sex combs as a model of evolutionary innovations. Evolution & Development. 13: 504-22. PMID 23016935 DOI: 10.1111/j.1525-142X.2011.00507.x  1
2011 Chandler JA, Lang JM, Bhatnagar S, Eisen JA, Kopp A. Bacterial communities of diverse Drosophila species: ecological context of a host-microbe model system. Plos Genetics. 7: e1002272. PMID 21966276 DOI: 10.1371/journal.pgen.1002272  1
2011 Tanaka K, Barmina O, Sanders LE, Arbeitman MN, Kopp A. Evolution of sex-specific traits through changes in HOX-dependent doublesex expression. Plos Biology. 9: e1001131. PMID 21886483 DOI: 10.1371/journal.pbio.1001131  1
2011 Bickel RD, Kopp A, Nuzhdin SV. Composite effects of polymorphisms near multiple regulatory elements create a major-effect QTL. Plos Genetics. 7: e1001275. PMID 21249179 DOI: 10.1371/journal.pgen.1001275  1
2011 Kaczmarczyk AN, Kopp A. Germline stem cell maintenance as a proximate mechanism of life-history trade-offs? Drosophila selected for prolonged fecundity have a slower rate of germline stem cell loss. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 33: 5-12. PMID 21120852 DOI: 10.1002/bies.201000085  1
2010 Arbeitman MN, Kopp A, Siegal ML, Van Doren M. Everything you always wanted to know about sex ... in flies. Sexual Development : Genetics, Molecular Biology, Evolution, Endocrinology, Embryology, and Pathology of Sex Determination and Differentiation. 4: 315-20. PMID 20926851 DOI: 10.1159/000320632  1
2010 Syed Z, Kopp A, Kimbrell DA, Leal WS. Bombykol receptors in the silkworm moth and the fruit fly. Proceedings of the National Academy of Sciences of the United States of America. 107: 9436-9. PMID 20439725 DOI: 10.1073/pnas.1003881107  1
2009 Bickel RD, Schackwitz WS, Pennacchio LA, Nuzhdin SV, Kopp A. Contrasting patterns of sequence evolution at the functionally redundant bric à brac paralogs in Drosophila melanogaster. Journal of Molecular Evolution. 69: 194-202. PMID 19639236 DOI: 10.1007/s00239-009-9265-y  1
2009 Kopp A. Metamodels and phylogenetic replication: a systematic approach to the evolution of developmental pathways. Evolution; International Journal of Organic Evolution. 63: 2771-89. PMID 19545263 DOI: 10.1111/j.1558-5646.2009.00761.x  1
2009 Matsuda M, Ng CS, Doi M, Kopp A, Tobari YN. Evolution in the Drosophila ananassae species subgroup. Fly. 3: 157-69. PMID 19377294  1
2009 Tanaka K, Barmina O, Kopp A. Distinct developmental mechanisms underlie the evolutionary diversification of Drosophila sex combs. Proceedings of the National Academy of Sciences of the United States of America. 106: 4764-9. PMID 19255422 DOI: 10.1073/pnas.0807875106  1
2009 Telonis-Scott M, Kopp A, Wayne ML, Nuzhdin SV, McIntyre LM. Sex-specific splicing in Drosophila: widespread occurrence, tissue specificity and evolutionary conservation. Genetics. 181: 421-34. PMID 19015538 DOI: 10.1534/genetics.108.096743  1
2008 Williams TM, Selegue JE, Werner T, Gompel N, Kopp A, Carroll SB. The regulation and evolution of a genetic switch controlling sexually dimorphic traits in Drosophila. Cell. 134: 610-23. PMID 18724934 DOI: 10.1016/j.cell.2008.06.052  1
2008 Ng CS, Hamilton AM, Frank A, Barmina O, Kopp A. Genetic basis of sex-specific color pattern variation in Drosophila malerkotliana. Genetics. 180: 421-9. PMID 18723880 DOI: 10.1534/genetics.108.091728  1
2008 Kopp A, Barmina O, Hamilton AM, Higgins L, McIntyre LM, Jones CD. Evolution of gene expression in the Drosophila olfactory system. Molecular Biology and Evolution. 25: 1081-92. PMID 18296696 DOI: 10.1093/molbev/msn055  1
2008 Ng CS, Kopp A. Sex combs are important for male mating success in Drosophila melanogaster. Behavior Genetics. 38: 195-201. PMID 18213513 DOI: 10.1007/s10519-008-9190-7  1
2007 Wayne ML, Telonis-Scott M, Bono LM, Harshman L, Kopp A, Nuzhdin SV, McIntyre LM. Simpler mode of inheritance of transcriptional variation in male Drosophila melanogaster. Proceedings of the National Academy of Sciences of the United States of America. 104: 18577-82. PMID 18003923 DOI: 10.1073/pnas.0705441104  1
2007 Barmina O, Kopp A. Sex-specific expression of a HOX gene associated with rapid morphological evolution. Developmental Biology. 311: 277-86. PMID 17868668 DOI: 10.1016/j.ydbio.2007.07.030  1
2006 McIntyre LM, Bono LM, Genissel A, Westerman R, Junk D, Telonis-Scott M, Harshman L, Wayne ML, Kopp A, Nuzhdin SV. Sex-specific expression of alternative transcripts in Drosophila. Genome Biology. 7: R79. PMID 16934145 DOI: 10.1186/gb-2006-7-8-R79  1
2006 Kopp A. Basal relationships in the Drosophila melanogaster species group. Molecular Phylogenetics and Evolution. 39: 787-98. PMID 16527496 DOI: 10.1016/j.ympev.2006.01.029  1
2006 Kopp A, Frank AK, Barmina O. Interspecific divergence, intrachromosomal recombination, and phylogenetic utility of Y-chromosomal genes in Drosophila. Molecular Phylogenetics and Evolution. 38: 731-41. PMID 16325432 DOI: 10.1016/j.ympev.2005.10.006  1
2006 Kopp A, Frank A, Fu J. Historical biogeography of Drosophila simulans based on Y-chromosomal sequences. Molecular Phylogenetics and Evolution. 38: 355-62. PMID 16051503 DOI: 10.1016/j.ympev.2005.06.006  1
2005 Barmina O, Gonzalo M, McIntyre LM, Kopp A. Sex- and segment-specific modulation of gene expression profiles in Drosophila. Developmental Biology. 288: 528-44. PMID 16269142 DOI: 10.1016/j.ydbio.2005.09.052  1
2005 Kopp A, Frank AK. Speciation in progress? A continuum of reproductive isolation in Drosophila bipectinata. Genetica. 125: 55-68. PMID 16175455 DOI: 10.1007/s10709-005-4787-8  1
2005 Kopp A, Barmina O. Evolutionary history of the Drosophila bipectinata species complex. Genetical Research. 85: 23-46. PMID 16089034 DOI: 10.1017/S0016672305007317  1
2004 Gibson G, Riley-Berger R, Harshman L, Kopp A, Vacha S, Nuzhdin S, Wayne M. Extensive sex-specific nonadditivity of gene expression in Drosophila melanogaster. Genetics. 167: 1791-9. PMID 15342517 DOI: 10.1534/genetics.104.026583  1
2004 Kopp A. Making a better worm. Nature Genetics. 36: 213-4. PMID 14988716 DOI: 10.1038/ng0304-213  1
2003 Wittkopp PJ, Carroll SB, Kopp A. Evolution in black and white: genetic control of pigment patterns in Drosophila. Trends in Genetics : Tig. 19: 495-504. PMID 12957543 DOI: 10.1016/S0168-9525(03)00194-X  1
2003 Kopp A, Graze RM, Xu S, Carroll SB, Nuzhdin SV. Quantitative trait loci responsible for variation in sexually dimorphic traits in Drosophila melanogaster. Genetics. 163: 771-87. PMID 12618413  1
2002 Kopp A, True JR. Phylogeny of the Oriental Drosophila melanogaster species group: a multilocus reconstruction. Systematic Biology. 51: 786-805. PMID 12396591 DOI: 10.1080/10635150290102410  1
2002 Llopart A, Elwyn S, Coyne JA. Pigmentation and mate choice in Drosophila. Nature. 419: 360; discussion 360. PMID 12353025 DOI: 10.1038/419360a  1
2002 Kopp A, True JR. Evolution of male sexual characters in the oriental Drosophila melanogaster species group. Evolution & Development. 4: 278-91. PMID 12168620 DOI: 10.1046/j.1525-142X.2002.02017.x  1
2002 Kopp A, Duncan I. Anteroposterior patterning in adult abdominal segments of Drosophila. Developmental Biology. 242: 15-30. PMID 11795937 DOI: 10.1006/dbio.2001.0529  1
2001 True JR, Kopp A, Carroll SB. Prophenoloxidase as a reporter of gene expression in Drosophila. Biotechniques. 30: 1004-6, 1008-9. PMID 11355335  1
2000 Kopp A, Duncan I, Godt D, Carroll SB. Genetic control and evolution of sexually dimorphic characters in Drosophila. Nature. 408: 553-9. PMID 11117736 DOI: 10.1038/35046017  1
1999 Kopp A, Blackman RK, Duncan I. Wingless, decapentaplegic and EGF receptor signaling pathways interact to specify dorso-ventral pattern in the adult abdomen of Drosophila. Development (Cambridge, England). 126: 3495-507. PMID 10409497  1
1997 Kopp A, Duncan I. Control of cell fate and polarity in the adult abdominal segments of Drosophila by optomotor-blind Development. 124: 3715-3726. PMID 9367427  1
1997 Kopp A, Muskavitch MA, Duncan I. The roles of hedgehog and engrailed in patterning adult abdominal segments of Drosophila. Development (Cambridge, England). 124: 3703-14. PMID 9367426  1
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