Martin Kreitman - Publications

Affiliations: 
Ecology and Evolution University of Chicago, Chicago, IL 
Area:
Molecular population genetics, genetics of speciation

98 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any innacuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2015 Jha AR, Zhou D, Brown CD, Kreitman M, Haddad GG, White KP. Shared genetic signals of hypoxia adaptation in Drosophila and in high-altitude human populations. Molecular Biology and Evolution. PMID 26576852 DOI: 10.1093/molbev/msv248  1
2015 Jiang P, Ludwig MZ, Kreitman M, Reinitz J. Natural variation of the expression pattern of the segmentation gene even-skipped in melanogaster. Developmental Biology. PMID 26129990 DOI: 10.1016/j.ydbio.2015.06.019  1
2015 Jha AR, Miles CM, Lippert NR, Brown CD, White KP, Kreitman M. Whole-Genome Resequencing of Experimental Populations Reveals Polygenic Basis of Egg-Size Variation in Drosophila melanogaster. Molecular Biology and Evolution. PMID 26044351 DOI: 10.1093/molbev/msv136  1
2014 Palsson A, Wesolowska N, Reynisdóttir S, Ludwig MZ, Kreitman M. Naturally occurring deletions of hunchback binding sites in the even-skipped stripe 3+7 enhancer. Plos One. 9: e91924. PMID 24786295 DOI: 10.1371/journal.pone.0091924  1
2014 Martinez C, Rest JS, Kim AR, Ludwig M, Kreitman M, White K, Reinitz J. Ancestral resurrection of the Drosophila S2E enhancer reveals accessible evolutionary paths through compensatory change. Molecular Biology and Evolution. 31: 903-16. PMID 24408913 DOI: 10.1093/molbev/msu042  1
2014 Cheung D, Miles C, Kreitman M, Ma J. Adaptation of the length scale and amplitude of the Bicoid gradient profile to achieve robust patterning in abnormally large Drosophila melanogaster embryos. Development (Cambridge, England). 141: 124-35. PMID 24284208 DOI: 10.1242/dev.098640  1
2014 He BZ, Ludwig MZ, Dickerson DA, Barse L, Arun B, Vilhjálmsson BJ, Jiang P, Park SY, Tamarina NA, Selleck SB, Wittkopp PJ, Bell GI, Kreitman M. Effect of genetic variation in a Drosophila model of diabetes-associated misfolded human proinsulin. Genetics. 196: 557-67. PMID 24281155 DOI: 10.1534/genetics.113.157800  1
2014 Park SY, Ludwig MZ, Tamarina NA, He BZ, Carl SH, Dickerson DA, Barse L, Arun B, Williams CL, Miles CM, Philipson LH, Steiner DF, Bell GI, Kreitman M. Genetic complexity in a Drosophila model of diabetes-associated misfolded human proinsulin. Genetics. 196: 539-55. PMID 24281154 DOI: 10.1534/genetics.113.157602  1
2013 Manu, Ludwig MZ, Kreitman M. Sex-specific pattern formation during early Drosophila development. Genetics. 194: 163-73. PMID 23410834 DOI: 10.1534/genetics.112.148205  1
2012 Finefield JM, Sherman DH, Kreitman M, Williams RM. Enantiomeric natural products: occurrence and biogenesis. Angewandte Chemie (International Ed. in English). 51: 4802-36. PMID 22555867 DOI: 10.1002/anie.201107204  1
2011 Ludwig MZ, Manu, Kittler R, White KP, Kreitman M. Consequences of eukaryotic enhancer architecture for gene expression dynamics, development, and fitness. Plos Genetics. 7: e1002364. PMID 22102826 DOI: 10.1371/journal.pgen.1002364  1
2011 Cheung D, Miles C, Kreitman M, Ma J. Scaling of the Bicoid morphogen gradient by a volume-dependent production rate. Development (Cambridge, England). 138: 2741-9. PMID 21613328 DOI: 10.1242/dev.064402  1
2011 He BZ, Holloway AK, Maerkl SJ, Kreitman M. Does positive selection drive transcription factor binding site turnover? A test with Drosophila cis-regulatory modules. Plos Genetics. 7: e1002053. PMID 21572512 DOI: 10.1371/journal.pgen.1002053  1
2011 Lott SE, Ludwig MZ, Kreitman M. Evolution and inheritance of early embryonic patterning in Drosophila simulans and D. sechellia. Evolution; International Journal of Organic Evolution. 65: 1388-99. PMID 21121913 DOI: 10.1111/j.1558-5646.2010.01206.x  1
2011 Miles CM, Lott SE, Hendriks CL, Ludwig MZ, Manu, Williams CL, Kreitman M. Artificial selection on egg size perturbs early pattern formation in Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 65: 33-42. PMID 20636356 DOI: 10.1111/j.1558-5646.2010.01088.x  1
2009 Di Giulio M, Kreitman M. Research on the origin of life. Introduction. Journal of Molecular Evolution. 69: 405. PMID 19847471 DOI: 10.1007/s00239-009-9284-8  1
2009 Chen JQ, Wu Y, Yang H, Bergelson J, Kreitman M, Tian D. Variation in the ratio of nucleotide substitution and indel rates across genomes in mammals and bacteria. Molecular Biology and Evolution. 26: 1523-31. PMID 19329651 DOI: 10.1093/molbev/msp063  1
2008 Tian D, Wang Q, Zhang P, Araki H, Yang S, Kreitman M, Nagylaki T, Hudson R, Bergelson J, Chen JQ. Single-nucleotide mutation rate increases close to insertions/deletions in eukaryotes. Nature. 455: 105-8. PMID 18641631 DOI: 10.1038/nature07175  1
2008 Bakker EG, Traw MB, Toomajian C, Kreitman M, Bergelson J. Low levels of polymorphism in genes that control the activation of defense response in Arabidopsis thaliana. Genetics. 178: 2031-43. PMID 18245336 DOI: 10.1534/genetics.107.083279  1
2007 Araki H, Innan H, Kreitman M, Bergelson J. Molecular evolution of pathogenicity-island genes in Pseudomonas viridiflava. Genetics. 177: 1031-41. PMID 17720907 DOI: 10.1534/genetics.107.077925  1
2007 Lott SE, Kreitman M, Palsson A, Alekseeva E, Ludwig MZ. Canalization of segmentation and its evolution in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 104: 10926-31. PMID 17569783 DOI: 10.1073/pnas.0701359104  1
2006 Bakker EG, Toomajian C, Kreitman M, Bergelson J. A genome-wide survey of R gene polymorphisms in Arabidopsis. The Plant Cell. 18: 1803-18. PMID 16798885 DOI: 10.1105/tpc.106.042614  1
2006 Bakker EG, Stahl EA, Toomajian C, Nordborg M, Kreitman M, Bergelson J. Distribution of genetic variation within and among local populations of Arabidopsis thaliana over its species range. Molecular Ecology. 15: 1405-18. PMID 16626462 DOI: 10.1111/j.1365-294X.2006.02884.x  1
2006 Araki H, Tian D, Goss EM, Jakob K, Halldorsdottir SS, Kreitman M, Bergelson J. Presence/absence polymorphism for alternative pathogenicity islands in Pseudomonas viridiflava, a pathogen of Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 103: 5887-92. PMID 16581904 DOI: 10.1073/pnas.0601431103  1
2005 Nordborg M, Hu TT, Ishino Y, Jhaveri J, Toomajian C, Zheng H, Bakker E, Calabrese P, Gladstone J, Goyal R, Jakobsson M, Kim S, Morozov Y, Padhukasahasram B, Plagnol V, ... ... Kreitman M, et al. The pattern of polymorphism in Arabidopsis thaliana. Plos Biology. 3: e196. PMID 15907155 DOI: 10.1371/journal.pbio.0030196  1
2005 Ludwig MZ, Palsson A, Alekseeva E, Bergman CM, Nathan J, Kreitman M. Functional evolution of a cis-regulatory module. Plos Biology. 3: e93. PMID 15757364 DOI: 10.1371/journal.pbio.0030093  1
2005 Goss EM, Kreitman M, Bergelson J. Genetic diversity, recombination and cryptic clades in Pseudomonas viridiflava infecting natural populations of Arabidopsis thaliana. Genetics. 169: 21-35. PMID 15489535 DOI: 10.1534/genetics.104.031351  1
2004 Qin H, Wu WB, Comeron JM, Kreitman M, Li WH. Intragenic spatial patterns of codon usage bias in prokaryotic and eukaryotic genomes. Genetics. 168: 2245-60. PMID 15611189 DOI: 10.1534/genetics.104.030866  1
2004 Kreitman M, Di Rienzo A. Balancing claims for balancing selection. Trends in Genetics : Tig. 20: 300-4. PMID 15219394 DOI: 10.1016/j.tig.2004.05.002  1
2004 Kreitman M. Journal of Molecular Evolution: Editorial Journal of Molecular Evolution. 58: 365-366.  1
2003 Johnson AN, Bergman CM, Kreitman M, Newfeld SJ. Embryonic enhancers in the dpp disk region regulate a second round of Dpp signaling from the dorsal ectoderm to the mesoderm that represses Zfh-1 expression in a subset of pericardial cells. Developmental Biology. 262: 137-51. PMID 14512024 DOI: 10.1016/S0012-1606(03)00350-6  1
2003 Toomajian C, Ajioka RS, Jorde LB, Kushner JP, Kreitman M. A method for detecting recent selection in the human genome from allele age estimates. Genetics. 165: 287-97. PMID 14504236  1
2003 Tian D, Traw MB, Chen JQ, Kreitman M, Bergelson J. Fitness costs of R-gene-mediated resistance in Arabidopsis thaliana. Nature. 423: 74-7. PMID 12721627 DOI: 10.1038/nature01588  1
2003 Mauricio R, Stahl EA, Korves T, Tian D, Kreitman M, Bergelson J. Natural selection for polymorphism in the disease resistance gene Rps2 of Arabidopsis thaliana. Genetics. 163: 735-46. PMID 12618410  1
2003 Comeron JM, Kreitman M, De La Vega FM. On the power to detect SNP/phenotype association in candidate quantitative trait loci genomic regions: a simulation study. Pacific Symposium On Biocomputing. Pacific Symposium On Biocomputing. 478-89. PMID 12603051  1
2002 Jakob K, Goss EM, Araki H, Van T, Kreitman M, Bergelson J. Pseudomonas viridiflava and P. syringae--natural pathogens of Arabidopsis thaliana. Molecular Plant-Microbe Interactions : Mpmi. 15: 1195-203. PMID 12481991 DOI: 10.1094/MPMI.2002.15.12.1195  1
2002 Toomajian C, Kreitman M. Sequence variation and haplotype structure at the human HFE locus. Genetics. 161: 1609-23. PMID 12196404  1
2002 Tian D, Araki H, Stahl E, Bergelson J, Kreitman M. Signature of balancing selection in Arabidopsis. Proceedings of the National Academy of Sciences of the United States of America. 99: 11525-30. PMID 12172007 DOI: 10.1073/pnas.172203599  1
2002 Brandt A, Scharf M, Pedra JH, Holmes G, Dean A, Kreitman M, Pittendrigh BR. Differential expression and induction of two Drosophila cytochrome P450 genes near the Rst(2)DDT locus. Insect Molecular Biology. 11: 337-41. PMID 12144699 DOI: 10.1046/j.1365-2583.2002.00344.x  1
2002 Comeron JM, Kreitman M. Population, evolutionary and genomic consequences of interference selection. Genetics. 161: 389-410. PMID 12019253  1
2002 Jensen MA, Charlesworth B, Kreitman M. Patterns of genetic variation at a chromosome 4 locus of Drosophila melanogaster and D. simulans. Genetics. 160: 493-507. PMID 11861556  1
2002 Bernardi G, Gojobori T, Kreitman M. Zuckerkandl Prize. Journal of Molecular Evolution. 54: 143. PMID 11821907 DOI: 10.1007/s00239-001-0082-1  1
2002 Nordborg M, Borevitz JO, Bergelson J, Berry CC, Chory J, Hagenblad J, Kreitman M, Maloof JN, Noyes T, Oefner PJ, Stahl EA, Weigel D. The extent of linkage disequilibrium in Arabidopsis thaliana. Nature Genetics. 30: 190-3. PMID 11780140 DOI: 10.1038/ng813  1
2001 Bergman CM, Kreitman M. Analysis of conserved noncoding DNA in Drosophila reveals similar constraints in intergenic and intronic sequences. Genome Research. 11: 1335-45. PMID 11483574 DOI: 10.1101/gr.178701  1
2001 Bergelson J, Kreitman M, Stahl EA, Tian D. Evolutionary dynamics of plant R-genes. Science (New York, N.Y.). 292: 2281-5. PMID 11423651 DOI: 10.1126/science.1061337  1
2001 Kreitman M, Gaasterland T. Editorial overview: Genomes and evolution ships in the night? Current Opinion in Genetics and Development. 11: 609-611. DOI: 10.1016/S0959-437X(00)00241-0  1
2000 Kreitman M. Methods to detect selection in populations with applications to the human. Annual Review of Genomics and Human Genetics. 1: 539-59. PMID 11701640 DOI: 10.1146/annurev.genom.1.1.539  1
2000 Kliman RM, Andolfatto P, Coyne JA, Depaulis F, Kreitman M, Berry AJ, McCarter J, Wakeley J, Hey J. The population genetics of the origin and divergence of the Drosophila simulans complex species. Genetics. 156: 1913-31. PMID 11102384  1
2000 Comeron JM, Kreitman M. The correlation between intron length and recombination in drosophila. Dynamic equilibrium between mutational and selective forces. Genetics. 156: 1175-90. PMID 11063693  1
2000 Brosius J, Kreitman M. Eugenics-evolutionary nonsense? Nature Genetics. 25: 253. PMID 10888865 DOI: 10.1038/76994  1
2000 Andolfatto P, Kreitman M. Molecular variation at the In(2L)t proximal breakpoint site in natural populations of Drosophila melanogaster and D. simulans. Genetics. 154: 1681-91. PMID 10747062  1
2000 Ludwig MZ, Bergman C, Patel NH, Kreitman M. Evidence for stabilizing selection in a eukaryotic enhancer element. Nature. 403: 564-7. PMID 10676967 DOI: 10.1038/35000615  0.92
1999 Kreitman M, Comeron JM. Coding sequence evolution. Current Opinion in Genetics & Development. 9: 637-41. PMID 10607619 DOI: 10.1016/S0959-437X(99)00034-9  1
1999 Andolfatto P, Wall JD, Kreitman M. Unusual haplotype structure at the proximal breakpoint of In(2L)t in a natural population of Drosophila melanogaster. Genetics. 153: 1297-311. PMID 10545460  1
1999 Stahl EA, Dwyer G, Mauricio R, Kreitman M, Bergelson J. Dynamics of disease resistance polymorphism at the Rpm1 locus of Arabidopsis. Nature. 400: 667-71. PMID 10458161 DOI: 10.1038/23260  1
1999 Antezana MA, Kreitman M. The nonrandom location of synonymous codons suggests that reading frame-independent forces have patterned codon preferences. Journal of Molecular Evolution. 49: 36-43. PMID 10368432 DOI: 10.1007/PL00006532  1
1999 Andreev D, Kreitman M, Phillips TW, Beeman RW, ffrench-Constant RH. Multiple origins of cyclodiene insecticide resistance in Tribolium castaneum (Coleoptera: Tenebrionidae). Journal of Molecular Evolution. 48: 615-24. PMID 10198127 DOI: 10.1007/PL00006504  1
1999 Liu F, Charlesworth D, Kreitman M. The effect of mating system differences on nucleotide diversity at the phosphoglucose isomerase locus in the plant genus Leavenworthia. Genetics. 151: 343-57. PMID 9872972  1
1999 Comeron JM, Kreitman M, Aguadé M. Natural selection on synonymous sites is correlated with gene length and recombination in Drosophila. Genetics. 151: 239-49. PMID 9872963  1
1998 Comeron JM, Kreitman M. The correlation between synonymous and nonsynonymous substitutions in Drosophila: mutation, selection or relaxed constraints? Genetics. 150: 767-75. PMID 9755207  1
1998 Zeng LW, Comeron JM, Chen B, Kreitman M. The molecular clock revisited: the rate of synonymous vs. replacement change in Drosophila. Genetica. 102: 369-82. PMID 9720289  1
1998 Hasson E, Wang IN, Zeng LW, Kreitman M, Eanes WF. Nucleotide variation in the triosephosphate isomerase (Tpi) locus of Drosophila melanogaster and Drosophila simulans. Molecular Biology and Evolution. 15: 756-69. PMID 9615457  1
1998 Bergelson J, Stahl E, Dudek S, Kreitman M. Genetic variation within and among populations of Arabidopsis thaliana. Genetics. 148: 1311-23. PMID 9539444  1
1998 Ludwig MZ, Patel NH, Kreitman M. Functional analysis of eve stripe 2 enhancer evolution in Drosophila: rules governing conservation and change. Development (Cambridge, England). 125: 949-58. PMID 9449677  1
1997 Roethele JB, Feder JL, Berlocher SH, Kreitman ME, Lashkari DA. Toward a molecular genetic linkage map for the apple maggot fly (Diptera: Tephritidae): Comparison of alternative strategies Annals of the Entomological Society of America. 90: 470-479.  1
1996 Ballard JW, Hatzidakis J, Karr TL, Kreitman M. Reduced variation in Drosophila simulans mitochondrial DNA. Genetics. 144: 1519-28. PMID 8978041  1
1996 Wayne ML, Kreitman M. Reduced variation at concertina, a heterochromatic locus in Drosophila. Genetical Research. 68: 101-8. PMID 8940899  1
1996 Zeng LW, Kreitman M. Simple strategy for sequencing cDNA clones. Biotechniques. 21: 446-52. PMID 8879583  1
1996 Kreitman M. The neutral theory is dead. Long live the neutral theory. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 18: 678-83; discussion 6. PMID 8760341 DOI: 10.1002/bies.950180812  1
1996 Wayne ML, Contamine D, Kreitman M. Molecular population genetics of ref(2)P, a locus which confers viral resistance in Drosophila. Molecular Biology and Evolution. 13: 191-9. PMID 8583891  1
1996 Kreitman M, Ludwig M. Tempo and mode of even-skipped stripe 2 enhancer evolution in Drosophila Seminars in Cell and Developmental Biology. 7: 583-592. DOI: 10.1006/scdb.1996.0072  1
1995 Ballard JW, Kreitman M. Is mitochondrial DNA a strictly neutral marker? Trends in Ecology & Evolution. 10: 485-8. PMID 21237113 DOI: 10.1016/S0169-5347(00)89195-8  1
1995 Ludwig MZ, Kreitman M. Evolutionary dynamics of the enhancer region of even-skipped in Drosophila. Molecular Biology and Evolution. 12: 1002-11. PMID 8524036  1
1995 Taylor MF, Shen Y, Kreitman ME. A population genetic test of selection at the molecular level. Science (New York, N.Y.). 270: 1497-9. PMID 7491497  1
1995 Houde P, Sheldon FH, Kreitman M. A comparison of solution and membrane-bound DNA x DNA hybridization, as used to infer phylogeny Journal of Molecular Evolution. 40: 678-688. DOI: 10.1007/BF00160517  1
1995 Kreitman M, Akashi H. Molecular evidence for natural selection Annual Review of Ecology and Systematics. 26: 403-422.  1
1994 Williams WV, Callegari P, Freundlich B, Keenan G, Eldridge D, Shin H, Kreitman M, McCallus D, Weiner DB. Molecular diagnosis of Borrelia burgdorferi infection (Lyme disease). Dna and Cell Biology. 13: 447. PMID 8011171  1
1994 Kreitman M, Wayne ML. Organization of genetic variation at the molecular level: lessons from Drosophila. Exs. 69: 157-83. PMID 7994105  1
1994 Ballard JW, Kreitman M. Unraveling selection in the mitochondrial genome of Drosophila. Genetics. 138: 757-72. PMID 7851772  1
1993 Landweber LF, Kreitman M. Producing single-stranded DNA in polymerase chain reaction for direct genomic sequencing. Methods in Enzymology. 218: 17-26. PMID 8510531  0.96
1993 Taylor MF, Heckel DG, Brown TM, Kreitman ME, Black B. Linkage of pyrethroid insecticide resistance to a sodium channel locus in the tobacco budworm. Insect Biochemistry and Molecular Biology. 23: 763-75. PMID 8397035 DOI: 10.1016/0965-1748(93)90064-Y  1
1993 Taylor MF, McKechnie SW, Pierce N, Kreitman M. The lepidopteran mitochondrial control region: structure and evolution. Molecular Biology and Evolution. 10: 1259-72. PMID 8277854  1
1993 Berry A, Kreitman M. Molecular analysis of an allozyme cline: alcohol dehydrogenase in Drosophila melanogaster on the east coast of North America. Genetics. 134: 869-93. PMID 8102342  1
1992 Williams WV, Callegari P, Freundlich B, Keenan G, Eldridge D, Shin H, Kreitman M, McCallus D, Weiner DB. Molecular diagnosis of Borrelia burgdorferi infection (Lyme disease). Dna and Cell Biology. 11: 207-13. PMID 1567553  1
1991 McDonald JH, Kreitman M. Adaptive protein evolution at the Adh locus in Drosophila. Nature. 351: 652-4. PMID 1904993 DOI: 10.1038/351652a0  1
1991 Berry AJ, Ajioka JW, Kreitman M. Lack of polymorphism on the Drosophila fourth chromosome resulting from selection. Genetics. 129: 1111-7. PMID 1686006  0.96
1991 Kreitman M, Hudson RR. Inferring the evolutionary histories of the Adh and Adh-dup loci in Drosophila melanogaster from patterns of polymorphism and divergence. Genetics. 127: 565-82. PMID 1673107  0.96
1991 Mcdonald JH, Kreitman M. Neutral mutation hypothesis test [12] Nature. 354: 116.  1
1990 Wesley CS, Ben M, Kreitman M, Hagag N, Eanes WF. Cloning regions of the Drosophila genome by microdissection of polytene chromosome DNA and PCR with nonspecific primer. Nucleic Acids Research. 18: 599-603. PMID 2106670  1
1989 Kreitman M, Landweber LF. A strategy for producing single-stranded DNA in the polymerase chain reaction. A direct method for genomic sequencing. Gene Analysis Techniques. 6: 84-8. PMID 2503434 DOI: 10.1016/0735-0651(89)90021-6  0.96
1987 Hudson RR, Kreitman M, Aguadé M. A test of neutral molecular evolution based on nucleotide data. Genetics. 116: 153-9. PMID 3110004  1
1987 Keith TP, Riley MA, Kreitman M, Lewontin RC, Curtis D, Chambers G. Sequence of the structural gene for xanthine dehydrogenase (rosy locus) in Drosophila melanogaster. Genetics. 116: 67-73. PMID 3036646  1
1986 Coyne JA, Kreitman M. EVOLUTIONARY GENETICS OF TWO SIBLING SPECIES, DROSOPHILA SIMULANS AND D. SECHELLIA. Evolution; International Journal of Organic Evolution. 40: 673-691. PMID 28556167 DOI: 10.1111/j.1558-5646.1986.tb00530.x  1
1986 Kreitman ME, Aguadé M. Excess polymorphism at the Adh locus in Drosophila melanogaster. Genetics. 114: 93-110. PMID 3021568  1
1986 Kreitman M, Aguadé M. Genetic uniformity in two populations of Drosophila melanogaster as revealed by filter hybridization of four-nucleotide-recognizing restriction enzyme digests. Proceedings of the National Academy of Sciences of the United States of America. 83: 3562-6. PMID 3010305  1
1986 Coyne JA, Kreitman M. Evolutionary genetics of two sibling species, Drosophila simulans and D. sechellia. Evolution. 40: 673-691.  1
1983 Kreitman M. Nucleotide polymorphism at the alcohol dehydrogenase locus of Drosophila melanogaster. Nature. 304: 412-7. PMID 6410283  1
1980 Kreitman M. Assessment of variability within electromorphs of alcohol dehydrogenase in Drosophila melanogaster. Genetics. 95: 467-75. PMID 6781981  1
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