Tim Sackton - Publications

Affiliations: 
Harvard University, Cambridge, MA, United States 
Area:
evolutionary genetics

36 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Feng S, Stiller J, Deng Y, Armstrong J, Fang Q, Reeve AH, Xie D, Chen G, Guo C, Faircloth BC, Petersen B, Wang Z, Zhou Q, Diekhans M, Chen W, ... ... Sackton TB, et al. Dense sampling of bird diversity increases power of comparative genomics. Nature. 587: 252-257. PMID 33177665 DOI: 10.1038/s41586-020-2873-9  0.649
2020 Sackton TB. Studying Natural Selection in the Era of Ubiquitous Genomes. Trends in Genetics : Tig. 36: 792-803. PMID 32800625 DOI: 10.1016/j.tig.2020.07.008  0.469
2019 Näpflin K, O'Connor EA, Becks L, Bensch S, Ellis VA, Hafer-Hahmann N, Harding KC, Lindén SK, Olsen MT, Roved J, Sackton TB, Shultz AJ, Venkatakrishnan V, Videvall E, Westerdahl H, et al. Genomics of host-pathogen interactions: challenges and opportunities across ecological and spatiotemporal scales. Peerj. 7: e8013. PMID 31720122 DOI: 10.7717/Peerj.8013  0.763
2019 Xu L, Wa Sin SY, Grayson P, Edwards SV, Sackton TB. Evolutionary dynamics of sex chromosomes of paleognathous birds. Genome Biology and Evolution. PMID 31329234 DOI: 10.1093/gbe/evz154  0.349
2019 Lamichhaney S, Card DC, Grayson P, Tonini JFR, Bravo GA, Näpflin K, Termignoni-Garcia F, Torres C, Burbrink F, Clarke JA, Sackton TB, Edwards SV. Integrating natural history collections and comparative genomics to study the genetic architecture of convergent evolution. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20180248. PMID 31154982 DOI: 10.1098/Rstb.2018.0248  0.501
2019 Sackton TB, Clark N. Convergent evolution in the genomics era: new insights and directions. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20190102. PMID 31154976 DOI: 10.1098/Rstb.2019.0102  0.421
2019 Cloutier A, Sackton TB, Grayson P, Clamp M, Baker AJ, Edwards SV. Whole-Genome Analyses Resolve the Phylogeny of Flightless Birds (Palaeognathae) in the Presence of an Empirical Anomaly Zone. Systematic Biology. PMID 31135914 DOI: 10.1093/sysbio/syz019  0.393
2019 Sackton TB, Grayson P, Cloutier A, Hu Z, Liu JS, Wheeler NE, Gardner PP, Clarke JA, Baker AJ, Clamp M, Edwards SV. Convergent regulatory evolution and loss of flight in paleognathous birds. Science (New York, N.Y.). 364: 74-78. PMID 30948549 DOI: 10.1126/Science.Aat7244  0.458
2019 Shultz AJ, Sackton TB. Immune genes are hotspots of shared positive selection across birds and mammals. Elife. 8. PMID 30620335 DOI: 10.7554/Elife.41815  0.755
2018 Sackton TB. Comparative genomics and transcriptomics of host-pathogen interactions in insects: evolutionary insights and future directions. Current Opinion in Insect Science. 31: 106-113. PMID 31109663 DOI: 10.1016/J.COIS.2018.12.007  0.498
2017 Tigano A, Sackton TB, Friesen VL. Assembly and RNA-free annotation of highly heterozygous genomes: the case of the thick-billed murre (Uria lomvia). Molecular Ecology Resources. PMID 28815912 DOI: 10.1111/1755-0998.12712  0.488
2017 Grayson P, Sin SYW, Sackton TB, Edwards SV. Comparative Genomics as a Foundation for Evo-Devo Studies in Birds. Methods in Molecular Biology (Clifton, N.J.). 1650: 11-46. PMID 28809012 DOI: 10.1007/978-1-4939-7216-6_2  0.417
2017 Sackton TB, Lazzaro BP, Andrew CG. Rapid expansion of immune-related gene families in the house fly, Musca domestica. Molecular Biology and Evolution. PMID 28087775 DOI: 10.1093/Molbev/Msw285  0.664
2016 Rago A, Gilbert DG, Choi JH, Sackton TB, Wang X, Kelkar YD, Werren JH, Colbourne JK. OGS2: genome re-annotation of the jewel wasp Nasonia vitripennis. Bmc Genomics. 17: 678. PMID 27561358 DOI: 10.1186/S12864-016-2886-9  0.58
2016 Sackton TB, Hartl DL. Genotypic Context and Epistasis in Individuals and Populations. Cell. 166: 279-87. PMID 27419868 DOI: 10.1016/J.Cell.2016.06.047  0.49
2015 Corbett-Detig RB, Hartl DL, Sackton TB. Natural selection constrains neutral diversity across a wide range of species. Plos Biology. 13: e1002112. PMID 25859758 DOI: 10.1371/Journal.Pbio.1002112  0.742
2014 Scott JG, Warren WC, Beukeboom LW, Bopp D, Clark AG, Giers SD, Hediger M, Jones AK, Kasai S, Leichter CA, Li M, Meisel RP, Minx P, Murphy TD, Nelson DR, ... ... Sackton TB, et al. Genome of the house fly, Musca domestica L., a global vector of diseases with adaptations to a septic environment. Genome Biology. 15: 466. PMID 25315136 DOI: 10.1186/S13059-014-0466-3  0.81
2014 Adrion JR, Kousathanas A, Pascual M, Burrack HJ, Haddad NM, Bergland AO, Machado H, Sackton TB, Schlenke TA, Watada M, Wegmann D, Singh ND. Drosophila suzukii: the genetic footprint of a recent, worldwide invasion. Molecular Biology and Evolution. 31: 3148-63. PMID 25158796 DOI: 10.1093/Molbev/Msu246  0.734
2014 Sackton TB, Corbett-Detig RB, Nagaraju J, Vaishna L, Arunkumar KP, Hartl DL. Positive selection drives faster-Z evolution in silkmoths. Evolution; International Journal of Organic Evolution. 68: 2331-42. PMID 24826901 DOI: 10.1111/Evo.12449  0.717
2013 Sackton TB, Werren JH, Clark AG. Characterizing the infection-induced transcriptome of Nasonia vitripennis reveals a preponderance of taxonomically-restricted immune genes. Plos One. 8: e83984. PMID 24386321 DOI: 10.1371/Journal.Pone.0083984  0.489
2013 Sackton TB, Hartl DL. Meta-analysis reveals that genes regulated by the Y chromosome in Drosophila melanogaster are preferentially localized to repressive chromatin. Genome Biology and Evolution. 5: 255-66. PMID 23315381 DOI: 10.1093/Gbe/Evt005  0.595
2012 Whiteman NK, Gloss AD, Sackton TB, Groen SC, Humphrey PT, Lapoint RT, Sønderby IE, Halkier BA, Kocks C, Ausubel FM, Pierce NE. Genes involved in the evolution of herbivory by a leaf-mining, Drosophilid fly. Genome Biology and Evolution. 4: 900-16. PMID 22813779 DOI: 10.1093/Gbe/Evs063  0.343
2012 Zhou J, Sackton TB, Martinsen L, Lemos B, Eickbush TH, Hartl DL. Y chromosome mediates ribosomal DNA silencing and modulates the chromatin state in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 109: 9941-6. PMID 22665801 DOI: 10.1073/Pnas.1207367109  0.515
2011 Sackton TB, Montenegro H, Hartl DL, Lemos B. Interspecific Y chromosome introgressions disrupt testis-specific gene expression and male reproductive phenotypes in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 108: 17046-51. PMID 21969588 DOI: 10.1073/Pnas.1114690108  0.524
2010 Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, ... ... Sackton TB, et al. Functional and evolutionary insights from the genomes of three parasitoid Nasonia species. Science (New York, N.Y.). 327: 343-8. PMID 20075255 DOI: 10.1126/Science.1178028  0.536
2010 Sackton TB, Lazzaro BP, Clark AG. Genotype and gene expression associations with immune function in Drosophila. Plos Genetics. 6: e1000797. PMID 20066029 DOI: 10.1371/Journal.Pgen.1000797  0.678
2009 Sackton TB, Kulathinal RJ, Bergman CM, Quinlan AR, Dopman EB, Carneiro M, Marth GT, Hartl DL, Clark AG. Population genomic inferences from sparse high-throughput sequencing of two populations of Drosophila melanogaster. Genome Biology and Evolution. 1: 449-65. PMID 20333214 DOI: 10.1093/Gbe/Evp048  0.774
2009 Sackton TB, Clark AG. Comparative profiling of the transcriptional response to infection in two species of Drosophila by short-read cDNA sequencing. Bmc Genomics. 10: 259. PMID 19500410 DOI: 10.1186/1471-2164-10-259  0.55
2009 Singh ND, Larracuente AM, Sackton TB, Clark AG. Comparative genomics on the drosophila phylogenetic tree Annual Review of Ecology, Evolution, and Systematics. 40: 459-480. DOI: 10.1146/Annurev.Ecolsys.110308.120214  0.808
2008 Larracuente AM, Sackton TB, Greenberg AJ, Wong A, Singh ND, Sturgill D, Zhang Y, Oliver B, Clark AG. Evolution of protein-coding genes in Drosophila. Trends in Genetics : Tig. 24: 114-23. PMID 18249460 DOI: 10.1016/J.Tig.2007.12.001  0.766
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341  0.659
2007 Sackton TB, Lazzaro BP, Schlenke TA, Evans JD, Hultmark D, Clark AG. Dynamic evolution of the innate immune system in Drosophila. Nature Genetics. 39: 1461-8. PMID 17987029 DOI: 10.1038/Ng.2007.60  0.798
2006 Lazzaro BP, Sackton TB, Clark AG. Genetic variation in Drosophila melanogaster resistance to infection: a comparison across bacteria. Genetics. 174: 1539-54. PMID 16888344 DOI: 10.1534/Genetics.105.054593  0.682
2005 Nielsen R, Bustamante C, Clark AG, Glanowski S, Sackton TB, Hubisz MJ, Fledel-Alon A, Tanenbaum DM, Civello D, White TJ, J Sninsky J, Adams MD, Cargill M. A scan for positively selected genes in the genomes of humans and chimpanzees. Plos Biology. 3: e170. PMID 15869325 DOI: 10.1371/Journal.Pbio.0030170  0.655
2003 Sackton TB, Haney RA, Rand DM. Cytonuclear coadaptation in Drosophila: disruption of cytochrome c oxidase activity in backcross genotypes. Evolution; International Journal of Organic Evolution. 57: 2315-25. PMID 14628919 DOI: 10.1111/J.0014-3820.2003.Tb00243.X  0.542
2002 Rand DM, Spaeth PS, Sackton TB, Schmidt PS. Ecological Genetics of Mpi and Gpi Polymorphisms in the Acorn Barnacle and the Spatial Scale of Neutral and Non-neutral Variation. Integrative and Comparative Biology. 42: 825-36. PMID 21708781 DOI: 10.1093/icb/42.4.825  0.578
Show low-probability matches.