John Roote - Publications

University of Cambridge, Cambridge, England, United Kingdom 

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.


Year Citation  Score
2016 Lee H, Cho DY, Whitworth C, Eisman R, Phelps M, Roote J, Kaufman T, Cook K, Russell S, Przytycka T, Oliver B. Effects of Gene Dose, Chromatin, and Network Topology on Expression in Drosophila melanogaster. Plos Genetics. 12: e1006295. PMID 27599372 DOI: 10.1371/journal.pgen.1006295  1
2014 Lowe N, Rees JS, Roote J, Ryder E, Armean IM, Johnson G, Drummond E, Spriggs H, Drummond J, Magbanua JP, Naylor H, Sanson B, Bastock R, Huelsmann S, Trovisco V, et al. Analysis of the expression patterns, subcellular localisations and interaction partners of Drosophila proteins using a pigP protein trap library. Development (Cambridge, England). 141: 3994-4005. PMID 25294943 DOI: 10.1242/dev.111054  1
2013 Lindsley DL, Roote J, Kennison JA. Anent the genomics of spermatogenesis in Drosophila melanogaster. Plos One. 8: e55915. PMID 23409089 DOI: 10.1371/journal.pone.0055915  1
2013 Roote J, Prokop A. How to design a genetic mating scheme: a basic training package for Drosophila genetics. G3 (Bethesda, Md.). 3: 353-8. PMID 23390611 DOI: 10.1534/g3.112.004820  1
2012 Roote J, Russell S. Toward a complete Drosophila deficiency kit. Genome Biology. 13: 149. PMID 22445094 DOI: 10.1186/gb-2012-13-3-149  1
2012 Yeh SD, Do T, Chan C, Cordova A, Carranza F, Yamamoto EA, Abbassi M, Gandasetiawan KA, Librado P, Damia E, Dimitri P, Rozas J, Hartl DL, Roote J, Ranz JM. Functional evidence that a recently evolved Drosophila sperm-specific gene boosts sperm competition. Proceedings of the National Academy of Sciences of the United States of America. 109: 2043-8. PMID 22308475 DOI: 10.1073/pnas.1121327109  1
2011 Jahn TR, Malzer E, Roote J, Vishnivetskaya A, Imarisio S, Giannakou M, Panser K, Marciniak S, Crowther DC. Modeling serpin conformational diseases in Drosophila melanogaster. Methods in Enzymology. 499: 227-58. PMID 21683257 DOI: 10.1016/B978-0-12-386471-0.00012-2  1
2011 Rees JS, Lowe N, Armean IM, Roote J, Johnson G, Drummond E, Spriggs H, Ryder E, Russell S, St Johnston D, Lilley KS. In vivo analysis of proteomes and interactomes using Parallel Affinity Capture (iPAC) coupled to mass spectrometry. Molecular & Cellular Proteomics : McP. 10: M110.002386. PMID 21447707 DOI: 10.1074/mcp.M110.002386  1
2010 Meadows LA, Chan YS, Roote J, Russell S. Neighbourhood continuity is not required for correct testis gene expression in Drosophila. Plos Biology. 8: e1000552. PMID 21151342 DOI: 10.1371/journal.pbio.1000552  1
2010 Rathke C, Barckmann B, Burkhard S, Jayaramaiah-Raja S, Roote J, Renkawitz-Pohl R. Distinct functions of Mst77F and protamines in nuclear shaping and chromatin condensation during Drosophila spermiogenesis. European Journal of Cell Biology. 89: 326-38. PMID 20138392 DOI: 10.1016/j.ejcb.2009.09.001  1
2008 Yan J, Huen D, Morely T, Johnson G, Gubb D, Roote J, Adler PN. The multiple-wing-hairs gene encodes a novel GBD-FH3 domain-containing protein that functions both prior to and after wing hair initiation. Genetics. 180: 219-28. PMID 18723886 DOI: 10.1534/genetics.108.091314  1
2007 Ashburner M, Roote J. Maintenance of a Drosophila laboratory: general procedures. Csh Protocols. 2007: pdb.ip35. PMID 21357030  1
2007 Ashburner M, Roote J. Culture of Drosophila: the laboratory setup. Csh Protocols. 2007: pdb.ip34. PMID 21357029  1
2007 Marygold SJ, Roote J, Reuter G, Lambertsson A, Ashburner M, Millburn GH, Harrison PM, Yu Z, Kenmochi N, Kaufman TC, Leevers SJ, Cook KR. The ribosomal protein genes and Minute loci of Drosophila melanogaster. Genome Biology. 8: R216. PMID 17927810 DOI: 10.1186/gb-2007-8-10-r216  1
2007 Ryder E, Ashburner M, Bautista-Llacer R, Drummond J, Webster J, Johnson G, Morley T, Chan YS, Blows F, Coulson D, Reuter G, Baisch H, Apelt C, Kauk A, Rudolph T, ... ... Roote J, et al. The DrosDel deletion collection: a Drosophila genomewide chromosomal deficiency resource. Genetics. 177: 615-29. PMID 17720900 DOI: 10.1534/genetics.107.076216  1
2007 Ranz JM, Maurin D, Chan YS, von Grotthuss M, Hillier LW, Roote J, Ashburner M, Bergman CM. Principles of genome evolution in the Drosophila melanogaster species group. Plos Biology. 5: e152. PMID 17550304 DOI: 10.1371/journal.pbio.0050152  1
2004 Kiehart DP, Franke JD, Chee MK, Montague RA, Chen TL, Roote J, Ashburner M. Drosophila crinkled, mutations of which disrupt morphogenesis and cause lethality, encodes fly myosin VIIA. Genetics. 168: 1337-52. PMID 15579689 DOI: 10.1534/genetics.104.026369  1
2004 Ashraf SI, Ganguly A, Roote J, Ip YT. Worniu, a Snail family zinc-finger protein, is required for brain development in Drosophila. Developmental Dynamics : An Official Publication of the American Association of Anatomists. 231: 379-86. PMID 15366015 DOI: 10.1002/dvdy.20130  1
2004 Ryder E, Blows F, Ashburner M, Bautista-Llacer R, Coulson D, Drummond J, Webster J, Gubb D, Gunton N, Johnson G, O'Kane CJ, Huen D, Sharma P, Asztalos Z, Baisch H, ... ... Roote J, et al. The DrosDel collection: a set of P-element insertions for generating custom chromosomal aberrations in Drosophila melanogaster. Genetics. 167: 797-813. PMID 15238529 DOI: 10.1534/genetics.104.026658  1
2004 Barbash DA, Roote J, Johnson G, Ashburner M. A new hybrid rescue allele in Drosophila melanogaster. Genetica. 120: 261-6. PMID 15088664 DOI: 10.1023/B:GENE.0000017647.97180.19  1
2004 Sawamura K, Roote J, Wu CI, Yamamoto MT. Genetic complexity underlying hybrid male sterility in Drosophila. Genetics. 166: 789-96. PMID 15020468 DOI: 10.1534/genetics.166.2.789  1
2003 Barbash DA, Siino DF, Tarone AM, Roote J. A rapidly evolving MYB-related protein causes species isolation in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 100: 5302-7. PMID 12695567 DOI: 10.1073/pnas.0836927100  1
2000 Barbash DA, Roote J, Ashburner M. The Drosophila melanogaster hybrid male rescue gene causes inviability in male and female species hybrids. Genetics. 154: 1747-71. PMID 10747067  1
1999 Iyengar B, Roote J, Campos AR. The tamas gene, identified as a mutation that disrupts larval behavior in Drosophila melanogaster, codes for the mitochondrial DNA polymerase catalytic subunit (DNApol-gamma125). Genetics. 153: 1809-24. PMID 10581287  1
1999 Ashraf SI, Hu X, Roote J, Ip YT. The mesoderm determinant snail collaborates with related zinc-finger proteins to control Drosophila neurogenesis. The Embo Journal. 18: 6426-38. PMID 10562554 DOI: 10.1093/emboj/18.22.6426  1
1999 Zhang YQ, Roote J, Brogna S, Davis AW, Barbash DA, Nash D, Ashburner M. stress sensitive B encodes an adenine nucleotide translocase in Drosophila melanogaster. Genetics. 153: 891-903. PMID 10511565  1
1999 Gubb D, Green C, Huen D, Coulson D, Johnson G, Tree D, Collier S, Roote J. The balance between isoforms of the prickle LIM domain protein is critical for planar polarity in Drosophila imaginal discs. Genes & Development. 13: 2315-27. PMID 10485852 DOI: 10.1101/gad.13.17.2315  1
1999 Ashburner M, Misra S, Roote J, Lewis SE, Blazej R, Davis T, Doyle C, Galle R, George R, Harris N, Hartzell G, Harvey D, Hong L, Houston K, Hoskins R, et al. An exploration of the sequence of a 2.9-Mb region of the genome of Drosophila melanogaster: the Adh region. Genetics. 153: 179-219. PMID 10471707  1
1998 Prokop A, Uhler J, Roote J, Bate M. The kakapo mutation affects terminal arborization and central dendritic sprouting of Drosophila motorneurons. The Journal of Cell Biology. 143: 1283-94. PMID 9832556 DOI: 10.1083/jcb.143.5.1283  1
1998 Gubb D, Zacharopoulou A, Livadaras Y, Gourzi P, Roote J, Savakis C. Recovery of a marked translocation strain that will facilitate the isolation of balancer chromosomes in the Mediterranean fruit fly, Ceratitis capitata. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 41: 256-65. PMID 9644834  1
1997 Gubb D, Roote J, Trenear J, Coulson D, Ashburner M. Topological constraints on transvection between white genes within the transposing element TE35B in Drosophila melanogaster. Genetics. 146: 919-37. PMID 9215897  1
1997 Davis T, Ashburner M, Johnson G, Gubb D, Roote J. Genetic and phenotypic analysis of the genes of the elbow-no-ocelli region of chromosome 2L of Drosophila melanogaster. Hereditas. 126: 67-75. PMID 9175495  1
1996 Davis AW, Roote J, Morley T, Sawamura K, Herrmann S, Ashburner M. Rescue of hybrid sterility in crosses between D. melanogaster and D. simulans. Nature. 380: 157-9. PMID 8600389 DOI: 10.1038/380157a0  1
1995 Spradling AC, Stern DM, Kiss I, Roote J, Laverty T, Rubin GM. Gene disruptions using P transposable elements: an integral component of the Drosophila genome project. Proceedings of the National Academy of Sciences of the United States of America. 92: 10824-30. PMID 7479892 DOI: 10.1073/pnas.92.24.10824  1
1993 Heitzler P, Coulson D, Saenz-Robles MT, Ashburner M, Roote J, Simpson P, Gubb D. Genetic and cytogenetic analysis of the 43A-E region containing the segment polarity gene costa and the cellular polarity genes prickle and spiny-legs in Drosophila melanogaster. Genetics. 135: 105-15. PMID 8224812  1
1990 Ashburner M, Thompson P, Roote J, Lasko PF, Grau Y, el Messal M, Roth S, Simpson P. The genetics of a small autosomal region of Drosophila melanogaster containing the structural gene for alcohol dehydrogenase. VII. Characterization of the region around the snail and cactus loci. Genetics. 126: 679-94. PMID 2123463  1
1990 Gubb D, Ashburner M, Roote J, Davis T. A novel transvection phenomenon affecting the white gene of Drosophila melanogaster. Genetics. 126: 167-76. PMID 2121594  1
1990 Hutter P, Roote J, Ashburner M. A genetic basis for the inviability of hybrids between sibling species of Drosophila. Genetics. 124: 909-20. PMID 2108905  1
1986 Gubb D, Roote J, McGill S, Shelton M, Ashburner M. Interactions between WHITE Genes Carried by a Large Transposing Element and the ZESTE Allele in DROSOPHILA MELANOGASTER. Genetics. 112: 551-75. PMID 17246318  1
1985 Gubb D, Roote J, Harrington G, McGill S, Durrant B, Shelton M, Ashburner M. A preliminary genetic analysis of TE146, a very large transposing element of Drosophila melanogaster Chromosoma. 92: 116-123. DOI: 10.1007/BF00328463  1
1984 Gubb D, Shelton M, Roote J, McGill S, Ashburner M. The genetic analysis of a large transposing element of Drosophila melanogaster - The insertion of a w+rst+ TE into the ck locus Chromosoma. 91: 54-64. DOI: 10.1007/BF00286485  1
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