Lisa Goering - Related publications

Affiliations: 
St. Edward's University, Austin, TX, United States 
Area:
Evolutionary Developmental Genetics
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Das Roy R, Hallikas O, Christensen MM, Renvoisé E, Jernvall J. Chromosomal neighbourhoods allow identification of organ specific changes in gene expression. Plos Computational Biology. 17: e1008947. PMID 34506480 DOI: 10.1371/journal.pcbi.1008947   
2021 Huang J, Zhang Q, He Y, Liu W, Xu Y, Liu K, Xian F, Li J, Hu J. Genome-Wide Identification, Expansion Mechanism and Expression Profiling Analysis of   Gene Family in Gramineae Crops. International Journal of Molecular Sciences. 22. PMID 34445464 DOI: 10.3390/ijms22168758   
2021 Thomas AL, Marsman J, Antony J, Schierding W, O'Sullivan JM, Horsfield JA. Transcriptional Regulation of : An Informatics Analysis. Genes. 12. PMID 34440349 DOI: 10.3390/genes12081175   
2021 Viswanathan R, Hartmann J, Pallares Cartes C, De Renzis S. Desensitisation of Notch signalling through dynamic adaptation in the nucleus. The Embo Journal. 40: e107245. PMID 34396565 DOI: 10.15252/embj.2020107245   
2021 Li G, Gu X, Gui S, Guo J, Yi T, Jin D. Transcriptome Analysis of Hormone-and Cuticle-Related Genes in the Development Process of Deutonymph in . Insects. 12. PMID 34442302 DOI: 10.3390/insects12080736   
2021 Kumar S, Ruggles A, Logan S, Mazarakis A, Tyson T, Bates M, Grosse C, Reed D, Li Z, Grimwood J, Schmutz J, Saski C. Comparative Transcriptomics of Non-Embryogenic and Embryogenic Callus in Semi-Recalcitrant and Non-Recalcitrant Upland Cotton Lines. Plants (Basel, Switzerland). 10. PMID 34579308 DOI: 10.3390/plants10091775   
2021 LaBelle J, Woo S. Light-Induced GFP Expression in Zebrafish Embryos using the Optogenetic TAEL/C120 System. Journal of Visualized Experiments : Jove. PMID 34487118 DOI: 10.3791/62818   
2021 Xia S, Ventura IM, Blaha A, Sgromo A, Han S, Izaurralde E, Long M. Rapid Gene evolution in an ancient post-transcriptional and translational regulatory system compensates for meiotic X chromosomal inactivation. Molecular Biology and Evolution. PMID 34626117 DOI: 10.1093/molbev/msab296   
2021 Li-Leger E, Feichtinger R, Flibotte S, Holzkamp H, Schnabel R, Moerman DG. Identification of essential genes in Caenorhabditis elegans through whole genome sequencing of legacy mutant collections. G3 (Bethesda, Md.). PMID 34550348 DOI: 10.1093/g3journal/jkab328   
2021 Zogopoulos VL, Saxami G, Malatras A, Angelopoulou A, Jen CH, Duddy WJ, Daras G, Hatzopoulos P, Westhead DR, Michalopoulos I. Coexpression Tool: a tool for gene coexpression analysis in . Iscience. 24: 102848. PMID 34381973 DOI: 10.1016/j.isci.2021.102848   
2021 Channappa M, Sharma S, Kulshreshtha D, Singh K, Bhardwaj SC, Murugasamy S, Sindhu A, Vikas VK, Aggarwal R. Transcriptome profiling and differential gene expression analysis provides insights into 24-based resistance in wheat against . 3 Biotech. 11: 455. PMID 34631354 DOI: 10.1007/s13205-021-02972-9   
2021 Das S, Rai SN. Statistical Approach of Gene Set Analysis with Quantitative Trait Loci for Crop Gene Expression Studies. Entropy (Basel, Switzerland). 23. PMID 34441085 DOI: 10.3390/e23080945   
2021 Zinani OQH, Keseroğlu K, Özbudak EM. Regulatory mechanisms ensuring coordinated expression of functionally related genes. Trends in Genetics : Tig. PMID 34376301 DOI: 10.1016/j.tig.2021.07.008   
2021 Xia B, Yanai I. Gene expression levels modulate germline mutation rates through the compound effects of transcription-coupled repair and damage. Human Genetics. PMID 34482438 DOI: 10.1007/s00439-021-02355-3   
2021 Duveau F, Vande Zande P, Metzger BP, Diaz CJ, Walker EA, Tryban S, Siddiq MA, Yang B, Wittkopp PJ. Mutational sources of -regulatory variation affecting gene expression in . Elife. 10. PMID 34463616 DOI: 10.7554/eLife.67806   
2021 Chen X, Song B, Liu M, Qin L, Dong Z. Understanding the Role of Vib1 in Gene Expression during Cellulose Degradation. Journal of Fungi (Basel, Switzerland). 7. PMID 34436152 DOI: 10.3390/jof7080613   
2021 Liu J, Wu S, Sun J, Sun J, Wang H, Cao X, Lu J, Jalal A, Wang C. Genome-wide analysis reveals widespread roles for RcREM genes in floral organ development in Rosa chinensis. Genomics. PMID 34571174 DOI: 10.1016/j.ygeno.2021.09.017   
2021 Kotarba G, Taracha-Wisniewska A, Miller M, Dabrowski M, Wilanowski T. Transcription factors Krüppel-like factor 4 and paired box 5 regulate the expression of the Grainyhead-like genes. Plos One. 16: e0257977. PMID 34570823 DOI: 10.1371/journal.pone.0257977   
2021 Graham PL, Fischer MD, Giri A, Pick L. The fushi tarazu zebra element is not required for Drosophila viability or fertility. G3 (Bethesda, Md.). PMID 34518886 DOI: 10.1093/g3journal/jkab300   
2021 Chey M, Jose AM. Heritable epigenetic changes at single genes: challenges and opportunities in Caenorhabditis elegans. Trends in Genetics : Tig. PMID 34493403 DOI: 10.1016/j.tig.2021.08.011   
2021 Piron-Prunier F, Persyn E, Legeai F, McClure M, Meslin C, Robin S, Alves-Carvalho S, Mohammad A, Blugeon C, Jacquin-Joly E, Montagné N, Elias M, Gauthier J. Comparative transcriptome analysis at the onset of speciation in a mimetic butterfly, the Ithomiini Melinaea marsaeus. Journal of Evolutionary Biology. PMID 34570954 DOI: 10.1111/jeb.13940   
2021 Goszczynski DE, Tinetti PS, Choi YH, Hinrichs K, Ross PJ. Genome activation in equine in vitro-produced embryos. Biology of Reproduction. PMID 34515744 DOI: 10.1093/biolre/ioab173   
2021 Xia Y, Yang J, Ma L, Yan S, Pang Y. Genome-Wide Identification and Analyses of Drought/Salt-Responsive Cytochrome Genes in . International Journal of Molecular Sciences. 22. PMID 34576120 DOI: 10.3390/ijms22189957   
2021 El-Sappah AH, Yan K, Huang Q, Islam MM, Li Q, Wang Y, Khan MS, Zhao X, Mir RR, Li J, El-Tarabily KA, Abbas M. Comprehensive Mechanism of Gene Silencing and Its Role in Plant Growth and Development. Frontiers in Plant Science. 12: 705249. PMID 34589097 DOI: 10.3389/fpls.2021.705249   
2021 Natarajan P, Ahn E, Reddy UK, Perumal R, Prom LK, Magill C. RNA-Sequencing in Resistant (QL3) and Susceptible (Theis) Sorghum Cultivars Inoculated With Johnsongrass Isolates of . Frontiers in Genetics. 12: 722519. PMID 34456979 DOI: 10.3389/fgene.2021.722519   
2021 Martínez-Pinteño A, Gassó P, Prohens L, Segura AG, Parellada M, Saiz-Ruiz J, Cuesta MJ, Bernardo M, Lafuente A, Mas S, Rodríguez N. Identification of as a Key Gene Involved in Antipsychotic-Induced Metabolic Dysregulation Based on Integrative Bioinformatics Analysis of Multi-Tissue Gene Expression Data. Frontiers in Pharmacology. 12: 729474. PMID 34483940 DOI: 10.3389/fphar.2021.729474   
2021 Briggs P, Hunter AL, Yang SH, Sharrocks AD, Iqbal M. PEGS: An efficient tool for gene set enrichment within defined sets of genomic intervals. F1000research. 10: 570. PMID 34504687 DOI: 10.12688/f1000research.53926.1   
2021 Zhong XL, Qian BP, Huang JC, Zhao SZ, Li Y, Qiu Y. Low expression of TCP1 (T-Complex 1) and PSMC1 (Proteasome 26S subunit, ATPase 1) in heterotopic ossification during ankylosing spondylitis. Bioengineered. 12: 7459-7469. PMID 34612770 DOI: 10.1080/21655979.2021.1975981   
2021 Reiter T, Montpetit R, Runnebaum R, Brown CT, Montpetit B. Charting Shifts in Saccharomyces cerevisiae Gene Expression across Asynchronous Time Trajectories with Diffusion Maps. Mbio. e0234521. PMID 34607457 DOI: 10.1128/mBio.02345-21   
2021 Chun KH. Discovery of Cellular RhoA Functions by the Integrated Application of Gene Set Enrichment Analysis. Biomolecules & Therapeutics. PMID 34429388 DOI: 10.4062/biomolther.2021.075   
2021 Yoon JH, Cho YS, Lee HB, Park JY, Lim HK. () Gene Cloning and Gonad-Specific Expression Pattern in Starry Flounder (). Animals : An Open Access Journal From Mdpi. 11. PMID 34438719 DOI: 10.3390/ani11082256   
2021 Fischer EK, Hauber ME, Bell AM. Back to the basics? Transcriptomics offers integrative insights into the role of space, time and the environment for gene expression and behaviour. Biology Letters. 17: 20210293. PMID 34520681 DOI: 10.1098/rsbl.2021.0293   
2021 Ding W, Chim SSC, Wang CC, Lau CSL, Leung TY. Molecular Mechanism and Pathways of Normal Human Parturition in Different Gestational Tissues: A Systematic Review of Transcriptome Studies. Frontiers in Physiology. 12: 730030. PMID 34566691 DOI: 10.3389/fphys.2021.730030   
2021 Laskar P, Bhattacharya S, Chaudhuri A, Kundu A. Exploring the GRAS gene family in common bean (Phaseolus vulgaris L.): characterization, evolutionary relationships, and expression analyses in response to abiotic stresses. Planta. 254: 84. PMID 34561734 DOI: 10.1007/s00425-021-03725-x   
2021 Guo YQ, Yang Y, Chai Y, Gao LL, Ma R. Identification and Evaluation of Reference Genes for Quantitative PCR Normalization in Alligator Weed Flea Beetle (Coleoptera: Chrysomelidae). Journal of Insect Science (Online). 21. PMID 34591086 DOI: 10.1093/jisesa/ieab067   
2021 Caba E, Sherman MD, Farizatto KLG, Alcira B, Wang HW, Giardina C, Shin DG, Sandefur CI, Bahr BA. Excitotoxic stimulation activates distinct pathogenic and protective expression signatures in the hippocampus. Journal of Cellular and Molecular Medicine. PMID 34414662 DOI: 10.1111/jcmm.16864   
2021 Chung H, Parkhurst CN, Magee EM, Phillips D, Habibi E, Chen F, Yeung BZ, Waldman J, Artis D, Regev A. Joint single-cell measurements of nuclear proteins and RNA in vivo. Nature Methods. 18: 1204-1212. PMID 34608310 DOI: 10.1038/s41592-021-01278-1   
2021 Meiler A, Marchiano F, Haering M, Weitkunat M, Schnorrer F, Habermann BH. AnnoMiner is a new web-tool to integrate epigenetics, transcription factor occupancy and transcriptomics data to predict transcriptional regulators. Scientific Reports. 11: 15463. PMID 34326396 DOI: 10.1038/s41598-021-94805-1   
2021 Zhao K, Kong D, Jin B, Smolke CD, Rhee SY. A novel form of bivalent chromatin associates with rapid induction of camalexin biosynthesis genes in response to a pathogen signal in Arabidopsis. Elife. 10. PMID 34523419 DOI: 10.7554/eLife.69508   
2021 Ren J, Zhang N, Li X, Sun X, Song J. Identification of reference genes for gene expression studies among different developmental stages of murine hearts. Bmc Developmental Biology. 21: 13. PMID 34496746 DOI: 10.1186/s12861-021-00244-6   
2021 Nair VD, Vasoya M, Nair V, Smith GR, Pincas H, Ge Y, Douglas CM, Esser KA, Sealfon SC. Differential analysis of chromatin accessibility and gene expression profiles identifies cis-regulatory elements in rat adipose and muscle. Genomics. 113: 3827-3841. PMID 34547403 DOI: 10.1016/j.ygeno.2021.09.013   
2021 Fan T, Lv T, Xie C, Zhou Y, Tian C. Genome-Wide Analysis of the Gene Family in Rice ( L.). Plants (Basel, Switzerland). 10. PMID 34579481 DOI: 10.3390/plants10091949   
2021 Zhao YP, Shen JL, Li WJ, Wu N, Chen C, Hou YX. Evolutionary and Characteristic Analysis of RING-DUF1117 E3 Ubiquitin Ligase Genes in Discerning the Role of GhRDUF4D in Resistance. Biomolecules. 11. PMID 34439811 DOI: 10.3390/biom11081145   
2021 Singh AN, Sharma N. In-silico identification of frequently mutated genes and their co-enriched metabolic pathways associated with Prostate cancer progression. Andrologia. e14236. PMID 34468989 DOI: 10.1111/and.14236   
2021 Yao LX, Pan CL, Yu LY, Qiao Z, Tang MQ, Wei F. [Selection of q RT-PCR reference genes for Amomum tsaoko seeds during dormancy release]. Zhongguo Zhong Yao Za Zhi = Zhongguo Zhongyao Zazhi = China Journal of Chinese Materia Medica. 46: 3832-3837. PMID 34472256 DOI: 10.19540/j.cnki.cjcmm.20210523.101   
2021 Liang Y, Wang M, Liu Y, Wang C, Takahashi K, Naruse K. Meta-Analysis-Assisted Detection of Gravity-Sensitive Genes in Human Vascular Endothelial Cells. Frontiers in Cell and Developmental Biology. 9: 689662. PMID 34422812 DOI: 10.3389/fcell.2021.689662   
2021 Gandhi S, Li Y, Tang W, Christensen JB, Urrutia HA, Vieceli FM, Piacentino ML, Bronner ME. A single-plasmid approach for genome editing coupled with long-term lineage analysis in chick embryos. Development (Cambridge, England). 148. PMID 34437692 DOI: 10.1242/dev.193565   
2021 Wang Z, Yu F, Shi D, Wang Y, Xu F, Zeng S. Selection and validation of reference genes for RT-qPCR analysis in Merr. 3 Biotech. 11: 403. PMID 34458065 DOI: 10.1007/s13205-021-02954-x   
2021 Marion-Poll L, Forêt B, Zielinski D, Massip F, Attia M, Carter AC, Syx L, Chang HY, Gendrel AV, Heard E. Locus specific epigenetic modalities of random allelic expression imbalance. Nature Communications. 12: 5330. PMID 34504093 DOI: 10.1038/s41467-021-25630-3   
2021 Pratt IS, Zhang B. Genome-Wide Identification of ARF Transcription Factor Gene Family and Their Expression Analysis in Sweet Potato. International Journal of Molecular Sciences. 22. PMID 34502298 DOI: 10.3390/ijms22179391