Year |
Citation |
Score |
2014 |
Vogelmann J, Le Gall A, Dejardin S, Allemand F, Gamot A, Labesse G, Cuvier O, Nègre N, Cohen-Gonsaud M, Margeat E, Nöllmann M. Chromatin insulator factors involved in long-range DNA interactions and their role in the folding of the Drosophila genome. Plos Genetics. 10: e1004544. PMID 25165871 DOI: 10.1371/journal.pgen.1004544 |
0.88 |
|
2014 |
Tagu D, Colbourne JK, Nègre N. Genomic data integration for ecological and evolutionary traits in non-model organisms. Bmc Genomics. 15: 490. PMID 25047861 DOI: 10.1186/1471-2164-15-490 |
0.88 |
|
2014 |
Slattery M, Ma L, Spokony RF, Arthur RK, Kheradpour P, Kundaje A, Nègre N, Crofts A, Ptashkin R, Zieba J, Ostapenko A, Suchy S, Victorsen A, Jameel N, Grundstad AJ, et al. Diverse patterns of genomic targeting by transcriptional regulators in Drosophila melanogaster. Genome Research. 24: 1224-35. PMID 24985916 DOI: 10.1101/gr.168807.113 |
0.88 |
|
2014 |
Arthur RK, Ma L, Slattery M, Spokony RF, Ostapenko A, Nègre N, White KP. Evolution of H3K27me3-marked chromatin is linked to gene expression evolution and to patterns of gene duplication and diversification. Genome Research. 24: 1115-24. PMID 24985914 DOI: 10.1101/gr.162008.113 |
0.88 |
|
2013 |
Slattery M, Voutev R, Ma L, Nègre N, White KP, Mann RS. Divergent transcriptional regulatory logic at the intersection of tissue growth and developmental patterning. Plos Genetics. 9: e1003753. PMID 24039600 DOI: 10.1371/journal.pgen.1003753 |
0.88 |
|
2013 |
Webber JL, Zhang J, Cote L, Vivekanand P, Ni X, Zhou J, Nègre N, Carthew RW, White KP, Rebay I. The relationship between long-range chromatin occupancy and polymerization of the Drosophila ETS family transcriptional repressor Yan. Genetics. 193: 633-49. PMID 23172856 DOI: 10.1534/genetics.112.146647 |
0.88 |
|
2012 |
Acharya P, Negre N, Johnston J, Wei Y, White KP, Henry RW, Arnosti DN. Evidence for autoregulation and cell signaling pathway regulation from genome-wide binding of the Drosophila retinoblastoma protein. G3 (Bethesda, Md.). 2: 1459-72. PMID 23173097 DOI: 10.1534/g3.112.004424 |
0.88 |
|
2012 |
Ni X, Zhang YE, Nègre N, Chen S, Long M, White KP. Adaptive evolution and the birth of CTCF binding sites in the Drosophila genome. Plos Biology. 10: e1001420. PMID 23139640 DOI: 10.1371/journal.pbio.1001420 |
0.88 |
|
2012 |
Slattery M, Nègre N, White KP. Interpreting the regulatory genome: the genomics of transcription factor function in Drosophila melanogaster. Briefings in Functional Genomics. 11: 336-46. PMID 23023663 DOI: 10.1093/bfgp/els034 |
0.88 |
|
2012 |
Marin EC, Dry KE, Alaimo DR, Rudd KT, Cillo AR, Clenshaw ME, Negre N, White KP, Truman JW. Ultrabithorax confers spatial identity in a context-specific manner in the Drosophila postembryonic ventral nervous system. Neural Development. 7: 31. PMID 22967828 DOI: 10.1186/1749-8104-7-31 |
0.88 |
|
2012 |
Nagaraj R, Gururaja-Rao S, Jones KT, Slattery M, Negre N, Braas D, Christofk H, White KP, Mann R, Banerjee U. Control of mitochondrial structure and function by the Yorkie/YAP oncogenic pathway. Genes & Development. 26: 2027-37. PMID 22925885 DOI: 10.1101/gad.183061.111 |
0.88 |
|
2012 |
Chen Y, Negre N, Li Q, Mieczkowska JO, Slattery M, Liu T, Zhang Y, Kim TK, He HH, Zieba J, Ruan Y, Bickel PJ, Myers RM, Wold BJ, White KP, et al. Systematic evaluation of factors influencing ChIP-seq fidelity. Nature Methods. 9: 609-14. PMID 22522655 DOI: 10.1038/nmeth.1985 |
0.88 |
|
2012 |
Ament SA, Wang Y, Chen CC, Blatti CA, Hong F, Liang ZS, Negre N, White KP, Rodriguez-Zas SL, Mizzen CA, Sinha S, Zhong S, Robinson GE. The transcription factor ultraspiracle influences honey bee social behavior and behavior-related gene expression. Plos Genetics. 8: e1002596. PMID 22479195 DOI: 10.1371/journal.pgen.1002596 |
0.88 |
|
2011 |
Jungreis I, Lin MF, Spokony R, Chan CS, Negre N, Victorsen A, White KP, Kellis M. Evidence of abundant stop codon readthrough in Drosophila and other metazoa. Genome Research. 21: 2096-113. PMID 21994247 DOI: 10.1101/gr.119974.110 |
0.88 |
|
2011 |
Duan H, Dai Q, Kavaler J, Bejarano F, Medranda G, Nègre N, Lai EC. Insensitive is a corepressor for Suppressor of Hairless and regulates Notch signalling during neural development. The Embo Journal. 30: 3120-33. PMID 21765394 DOI: 10.1038/emboj.2011.218 |
0.88 |
|
2011 |
d'Alençon E, Nègre N, Stanojcic S, Alassoeur B, Gimenez S, Léger A, Abd-Alla A, Juliant S, Fournier P. Characterization of a CENP-B homolog in the holocentric Lepidoptera Spodoptera frugiperda. Gene. 485: 91-101. PMID 21712078 DOI: 10.1016/j.gene.2011.06.007 |
0.88 |
|
2011 |
Wang Y, Wu W, Negre NN, White KP, Li C, Shah PK. Determinants of antigenicity and specificity in immune response for protein sequences. Bmc Bioinformatics. 12: 251. PMID 21693021 DOI: 10.1186/1471-2105-12-251 |
0.88 |
|
2011 |
Quan J, Saaem I, Tang N, Ma S, Negre N, Gong H, White KP, Tian J. Parallel on-chip gene synthesis and application to optimization of protein expression. Nature Biotechnology. 29: 449-52. PMID 21516083 DOI: 10.1038/nbt.1847 |
0.88 |
|
2011 |
Slattery M, Ma L, Négre N, White KP, Mann RS. Genome-wide tissue-specific occupancy of the Hox protein Ultrabithorax and Hox cofactor Homothorax in Drosophila. Plos One. 6: e14686. PMID 21483663 DOI: 10.1371/journal.pone.0014686 |
0.88 |
|
2011 |
Nègre N, Brown CD, Ma L, Bristow CA, Miller SW, Wagner U, Kheradpour P, Eaton ML, Loriaux P, Sealfon R, Li Z, Ishii H, Spokony RF, Chen J, Hwang L, et al. A cis-regulatory map of the Drosophila genome. Nature. 471: 527-31. PMID 21430782 DOI: 10.1038/nature09990 |
0.88 |
|
2011 |
Ho JW, Bishop E, Karchenko PV, Nègre N, White KP, Park PJ. ChIP-chip versus ChIP-seq: lessons for experimental design and data analysis. Bmc Genomics. 12: 134. PMID 21356108 DOI: 10.1186/1471-2164-12-134 |
0.88 |
|
2010 |
Roy S, Ernst J, Kharchenko PV, Kheradpour P, Negre N, Eaton ML, Landolin JM, Bristow CA, Ma L, Lin MF, Washietl S, Arshinoff BI, Ay F, Meyer PE, et al. Identification of functional elements and regulatory circuits by Drosophila modENCODE. Science (New York, N.Y.). 330: 1787-97. PMID 21177974 DOI: 10.1126/science.1198374 |
0.88 |
|
2010 |
Nègre N, Brown CD, Shah PK, Kheradpour P, Morrison CA, Henikoff JG, Feng X, Ahmad K, Russell S, White RA, Stein L, Henikoff S, Kellis M, White KP. A comprehensive map of insulator elements for the Drosophila genome. Plos Genetics. 6: e1000814. PMID 20084099 DOI: 10.1371/journal.pgen.1000814 |
0.88 |
|
2009 |
Tian F, Shah PK, Liu X, Negre N, Chen J, Karpenko O, White KP, Grossman RL. Flynet: a genomic resource for Drosophila melanogaster transcriptional regulatory networks. Bioinformatics (Oxford, England). 25: 3001-4. PMID 19656951 DOI: 10.1093/bioinformatics/btp469 |
0.88 |
|
2009 |
Liu J, Ghanim M, Xue L, Brown CD, Iossifov I, Angeletti C, Hua S, Nègre N, Ludwig M, Stricker T, Al-Ahmadie HA, Tretiakova M, Camp RL, Perera-Alberto M, Rimm DL, et al. Analysis of Drosophila segmentation network identifies a JNK pathway factor overexpressed in kidney cancer. Science (New York, N.Y.). 323: 1218-22. PMID 19164706 DOI: 10.1126/science.1157669 |
0.88 |
|
2006 |
Nègre N, Cavalli G. [Polycomb controls the cell fate]. MéDecine Sciences : M/S. 22: 1033-5. PMID 17156722 DOI: 10.1051/medsci/200622121033 |
0.88 |
|
2006 |
Nègre N, Lavrov S, Hennetin J, Bellis M, Cavalli G. Mapping the distribution of chromatin proteins by ChIP on chip. Methods in Enzymology. 410: 316-41. PMID 16938558 DOI: 10.1016/S0076-6879(06)10015-4 |
0.88 |
|
2006 |
Comet I, Savitskaya E, Schuettengruber B, Nègre N, Lavrov S, Parshikov A, Juge F, Gracheva E, Georgiev P, Cavalli G. PRE-mediated bypass of two Su(Hw) insulators targets PcG proteins to a downstream promoter. Developmental Cell. 11: 117-24. PMID 16824958 DOI: 10.1016/j.devcel.2006.05.009 |
0.88 |
|
2006 |
Grimaud C, Nègre N, Cavalli G. From genetics to epigenetics: the tale of Polycomb group and trithorax group genes. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 14: 363-75. PMID 16821133 DOI: 10.1007/s10577-006-1069-y |
0.88 |
|
2006 |
Nègre N, Hennetin J, Sun LV, Lavrov S, Bellis M, White KP, Cavalli G. Chromosomal distribution of PcG proteins during Drosophila development. Plos Biology. 4: e170. PMID 16613483 DOI: 10.1371/journal.pbio.0040170 |
0.88 |
|
2004 |
Nègre N, Bantignies F, Cavalli G. Polycomb, trithorax and cellular memory | Polycomb, trithorax el mémoire cellulaire Biofutur. 27-31. |
0.88 |
|
2003 |
Sun LV, Chen L, Greil F, Negre N, Li TR, Cavalli G, Zhao H, Van Steensel B, White KP. Protein-DNA interaction mapping using genomic tiling path microarrays in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 100: 9428-33. PMID 12876199 DOI: 10.1073/pnas.1533393100 |
0.88 |
|
2003 |
Nègre N, Ghysen A, Martinez AM. Mitotic G2-arrest is required for neural cell fate determination in Drosophila. Mechanisms of Development. 120: 253-65. PMID 12559497 DOI: 10.1016/S0925-4773(02)00419-7 |
0.88 |
|
Show low-probability matches. |