Rob Kulathinal - Publications

Temple University, Philadelphia, PA, United States 
evolutionary genetics, population genomics, speciation, bioinformatics

41 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2016 Stanley CE, Kulathinal RJ. Genomic signatures of domestication on neurogenetic genes in Drosophila melanogaster. Bmc Evolutionary Biology. 16: 6. PMID 26728183 DOI: 10.1186/s12862-015-0580-1  1
2015 Ramakodi MP, Kulathinal RJ, Chung Y, Serebriiskii I, Liu JC, Ragin CC. Ancestral-derived effects on the mutational landscape of laryngeal cancer. Genomics. PMID 26721311 DOI: 10.1016/j.ygeno.2015.12.004  1
2015 Block KI, Gyllenhaal C, Lowe L, Amedei A, Amin AR, Amin A, Aquilano K, Arbiser J, Arreola A, Arzumanyan A, Ashraf SS, Azmi AS, Benencia F, Bhakta D, Bilsland A, ... ... Kulathinal RJ, et al. Designing a broad-spectrum integrative approach for cancer prevention and treatment. Seminars in Cancer Biology. 35: S276-304. PMID 26590477 DOI: 10.1016/J.Semcancer.2015.09.007  1
2015 Feitelson MA, Arzumanyan A, Kulathinal RJ, Blain SW, Holcombe RF, Mahajna J, Marino M, Martinez-Chantar ML, Nawroth R, Sanchez-Garcia I, Sharma D, Saxena NK, Singh N, Vlachostergios PJ, Guo S, et al. Sustained proliferation in cancer: Mechanisms and novel therapeutic targets. Seminars in Cancer Biology. PMID 25892662 DOI: 10.1016/j.semcancer.2015.02.006  1
2015 Rigby N, Kulathinal RJ. Genetic Architecture of Sexual Dimorphism in Humans. Journal of Cellular Physiology. 230: 2304-10. PMID 25740260 DOI: 10.1002/jcp.24979  1
2014 Zhang Z, Yoo Y, Wattal S, Zhang B, Kulathinal R. Generative diffusion of innovations and knowledge networks in open source projects 35th International Conference On Information Systems "Building a Better World Through Information Systems", Icis 2014 1
2013 Kronforst MR, Hansen ME, Crawford NG, Gallant JR, Zhang W, Kulathinal RJ, Kapan DD, Mullen SP. Hybridization reveals the evolving genomic architecture of speciation. Cell Reports. 5: 666-77. PMID 24183670 DOI: 10.1016/J.Celrep.2013.09.042  1
2013 Kulathinal RJ. Functional genetics in the post-genomics era: building a better roadmap in Drosophila. G3 (Bethesda, Md.). 3: 1451-2. PMID 24019096 DOI: 10.1534/g3.113.007351  1
2013 Kulathinal RJ. Functional genetics in the post-genomics era: building a better roadmap in Drosophila. Genetics. 195: 7-8. PMID 24018766 DOI: 10.1534/genetics.113.156497  1
2013 Civetta A, Eirín-López JM, Kulathinal R, Marshall JL. The evolution of sex-related traits and genes 2012. International Journal of Evolutionary Biology. 2013: 590769. PMID 23573457 DOI: 10.1155/2013/590769  0.4
2013 Um SY, Yoo Y, Wattal S, Kulathinal RJ, Zhang B. The architecture of generativity in a digital ecosystem: A network biology perspective International Conference On Information Systems (Icis 2013): Reshaping Society Through Information Systems Design. 4: 3721-3733.  1
2012 Zhang Z, Kulathinal R, Wattal S, Yoo Y. Generative diffusion of innovations: An organizational genetics approach International Conference On Information Systems, Icis 2012. 1: 834-843.  1
2011 Kusumi K, Kulathinal RJ, Abzhanov A, Boissinot S, Crawford NG, Faircloth BC, Glenn TC, Janes DE, Losos JB, Menke DB, Poe S, Sanger TJ, Schneider CJ, Stapley J, Wade J, et al. Developing a community-based genetic nomenclature for anole lizards. Bmc Genomics. 12: 554. PMID 22077994 DOI: 10.1186/1471-2164-12-554  1
2011 Civetta A, Eirín-López JM, Kulathinal R, Marshall JL. The evolution of sex-related traits and genes. International Journal of Evolutionary Biology. 2011: 807218. PMID 21915381 DOI: 10.4061/2011/807218  0.4
2011 Grassa CJ, Kulathinal RJ. Elevated Evolutionary Rates among Functionally Diverged Reproductive Genes across Deep Vertebrate Lineages. International Journal of Evolutionary Biology. 2011: 274975. PMID 21811675 DOI: 10.4061/2011/274975  0.8
2010 Renn SC, Machado HE, Jones A, Soneji K, Kulathinal RJ, Hofmann HA. Using comparative genomic hybridization to survey genomic sequence divergence across species: a proof-of-concept from Drosophila. Bmc Genomics. 11: 271. PMID 20429934 DOI: 10.1186/1471-2164-11-271  1
2010 Mayr E. Commemorating the 20th century Darwin: Ernst Mayr's words and thoughts, five years later. Interview by Rob J. Kulathinal. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 53: 157-9. PMID 20140034 DOI: 10.1139/g09-094  1
2009 Sackton TB, Kulathinal RJ, Bergman CM, Quinlan AR, Dopman EB, Carneiro M, Marth GT, Hartl DL, Clark AG. Population genomic inferences from sparse high-throughput sequencing of two populations of Drosophila melanogaster. Genome Biology and Evolution. 1: 449-65. PMID 20333214 DOI: 10.1093/Gbe/Evp048  1
2009 Kulathinal RJ, Stevison LS, Noor MA. The genomics of speciation in Drosophila: diversity, divergence, and introgression estimated using low-coverage genome sequencing. Plos Genetics. 5: e1000550. PMID 19578407 DOI: 10.1371/journal.pgen.1000550  1
2009 Shevelyov YY, Lavrov SA, Mikhaylova LM, Nurminsky ID, Kulathinal RJ, Egorova KS, Rozovsky YM, Nurminsky DI. The B-type lamin is required for somatic repression of testis-specific gene clusters. Proceedings of the National Academy of Sciences of the United States of America. 106: 3282-7. PMID 19218438 DOI: 10.1073/Pnas.0811933106  1
2009 Loevenich SN, Brunner E, King NL, Deutsch EW, Stein SE, Aebersold R, Hafen E. The Drosophila melanogaster PeptideAtlas facilitates the use of peptide data for improved fly proteomics and genome annotation. Bmc Bioinformatics. 10: 59. PMID 19210778 DOI: 10.1186/1471-2105-10-59  1
2009 Tweedie S, Ashburner M, Falls K, Leyland P, McQuilton P, Marygold S, Millburn G, Osumi-Sutherland D, Schroeder A, Seal R, Zhang H. FlyBase: enhancing Drosophila Gene Ontology annotations. Nucleic Acids Research. 37: D555-9. PMID 18948289 DOI: 10.1093/nar/gkn788  1
2008 Kulathinal RJ, Singh RS. The molecular basis of speciation: from patterns to processes, rules to mechanisms. Journal of Genetics. 87: 327-38. PMID 19147922 DOI: 10.1007/s12041-008-0055-x  1
2008 Kulathinal RJ, Bennett SM, Fitzpatrick CL, Noor MA. Fine-scale mapping of recombination rate in Drosophila refines its correlation to diversity and divergence. Proceedings of the National Academy of Sciences of the United States of America. 105: 10051-6. PMID 18621713 DOI: 10.1073/pnas.0801848105  1
2007 Haerty W, Jagadeeshan S, Kulathinal RJ, Wong A, Ravi Ram K, Sirot LK, Levesque L, Artieri CG, Wolfner MF, Civetta A, Singh RS. Evolution in the fast lane: rapidly evolving sex-related genes in Drosophila. Genetics. 177: 1321-35. PMID 18039869 DOI: 10.1534/Genetics.107.078865  1
2007 Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Hodges E, et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature. 450: 219-32. PMID 17994088 DOI: 10.1038/Nature06340  1
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Kulathinal RJ, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341  0.4
2005 Singh RS, Kulathinal RJ. Male sex drive and the masculinization of the genome. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 27: 518-25. PMID 15832384 DOI: 10.1002/bies.20212  1
2005 Kulathinal RJ, Hartl DL. The latest buzz in comparative genomics. Genome Biology. 6: 201. PMID 15642105 DOI: 10.1186/Gb-2005-6-1-201  1
2004 Kulathinal RJ, Bettencourt BR, Hartl DL. Compensated deleterious mutations in insect genomes. Science (New York, N.Y.). 306: 1553-4. PMID 15498973 DOI: 10.1126/Science.1100522  1
2004 Castillo-Davis CI, Kondrashov FA, Hartl DL, Kulathinal RJ. The functional genomic distribution of protein divergence in two animal phyla: coevolution, genomic conflict, and constraint. Genome Research. 14: 802-11. PMID 15123580 DOI: 10.1101/Gr.2195604  1
2004 Kulathinal RJ, Singh RS. The nature of genetic variation in sex and reproduction-related genes among sibling species of the Drosophila melanogaster complex. Genetica. 120: 245-52. PMID 15088662 DOI: 10.1023/B:GENE.0000017645.84748.dd  1
2003 Sawyer SA, Kulathinal RJ, Bustamante CD, Hartl DL. Bayesian analysis suggests that most amino acid replacements in Drosophila are driven by positive selection. Journal of Molecular Evolution. 57: S154-64. PMID 15008412 DOI: 10.1007/S00239-003-0022-3  1
2003 Kulathinal RJ, Skwarek L, Morton RA, Singh RS. Rapid evolution of the sex-determining gene, transformer: structural diversity and rate heterogeneity among sibling species of Drosophila. Molecular Biology and Evolution. 20: 441-52. PMID 12644565 DOI: 10.1093/molbev/msg053  1
2002 Torgerson DG, Kulathinal RJ, Singh RS. Mammalian sperm proteins are rapidly evolving: evidence of positive selection in functionally diverse genes. Molecular Biology and Evolution. 19: 1973-80. PMID 12411606  1
2000 Singh RS, Kulathinal RJ. Sex gene pool evolution and speciation: a new paradigm. Genes & Genetic Systems. 75: 119-30. PMID 10984836  1
2000 Kulathinal RJ, Singh RS. A biogeographic genetic approach for testing the role of reinforcement: the case of Drosophila pseudoobscura and D. persimilis. Evolution; International Journal of Organic Evolution. 54: 210-7. PMID 10937197  1
2000 Singh RS, Kulathinal RJ. Proceedings of Fukuoka International Symposium on Population Genetics: Sex gene pool evolution and speciation: A new paradigm Genes and Genetic Systems. 75: 119-130. DOI: 10.1266/ggs.75.119  1
2000 Kulathinal RJ, Singh RS. Reinforcement with gene flow? A reply Evolution. 54: 2176-2177.  1
1998 Kulathinal R, Singh RS. Cytological characterization of premeiotic versus postmeiotic defects producing hybrid male sterility among sibling species of the Drosophila melanogaster complex Evolution. 52: 1067-1079.  1
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