Amanda Larracuente - Publications

Affiliations: 
University of Rochester, Rochester, NY 

24/29 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Chakraborty M, Chang CH, Khost DE, Vedanayagam J, Adrion JR, Liao Y, Montooth KL, Meiklejohn CD, Larracuente AM, Emerson JJ. Evolution of genome structure in the species complex. Genome Research. PMID 33563718 DOI: 10.1101/gr.263442.120  0.32
2020 Price TAR, Windbichler N, Unckless RL, Sutter A, Runge JN, Ross PA, Pomiankowski A, Nuckolls NL, Montchamp-Moreau C, Mideo N, Martin OY, Manser A, Legros M, Larracuente AM, Holman L, et al. Resistance to natural and synthetic gene drive systems. Journal of Evolutionary Biology. PMID 32969551 DOI: 10.1111/jeb.13693  0.64
2020 Sproul JS, Khost DE, Eickbush DG, Negm S, Wei X, Wong I, Larracuente AM. Dynamic evolution of euchromatic satellites on the X chromosome in Drosophila melanogaster and the simulans clade. Molecular Biology and Evolution. PMID 32191304 DOI: 10.1093/molbev/msaa078  0.32
2019 Courret C, Chang CH, Wei KH, Montchamp-Moreau C, Larracuente AM. Meiotic drive mechanisms: lessons from . Proceedings. Biological Sciences. 286: 20191430. PMID 31640520 DOI: 10.1098/rspb.2019.1430  0.32
2019 Chang CH, Chavan A, Palladino J, Wei X, Martins NMC, Santinello B, Chen CC, Erceg J, Beliveau BJ, Wu CT, Larracuente AM, Mellone BG. Islands of retroelements are major components of Drosophila centromeres. Plos Biology. 17: e3000241. PMID 31086362 DOI: 10.1371/journal.pbio.3000241  0.32
2018 Chang CH, Larracuente AM. Heterochromatin-Enriched Assemblies Reveal the Sequence and Organization of the Y Chromosome. Genetics. PMID 30420487 DOI: 10.1534/genetics.118.301765  0.32
2018 Fallon TR, Lower SE, Chang CH, Bessho-Uehara M, Martin GJ, Bewick AJ, Behringer M, Debat HJ, Wong I, Day JC, Suvorov A, Silva CJ, Stanger-Hall KF, Hall DW, Schmitz RJ, ... ... Larracuente AM, et al. Firefly genomes illuminate parallel origins of bioluminescence in beetles. Elife. 7. PMID 30324905 DOI: 10.7554/eLife.36495  0.32
2017 Khost DE, Eickbush DG, Larracuente AM. Single-molecule sequencing resolves the detailed structure of complex satellite DNA loci in Drosophila melanogaster. Genome Research. PMID 28373483 DOI: 10.1101/gr.213512.116  0.32
2017 Chang CH, Larracuente AM. Genomic changes following the reversal of a Y chromosome to an autosome in Drosophila pseudoobscura. Evolution; International Journal of Organic Evolution. PMID 28322435 DOI: 10.1111/evo.13229  0.32
2016 Lindholm AK, Dyer KA, Firman RC, Fishman L, Forstmeier W, Holman L, Johannesson H, Knief U, Kokko H, Larracuente AM, Manser A, Montchamp-Moreau C, Petrosyan VG, Pomiankowski A, Presgraves DC, et al. The Ecology and Evolutionary Dynamics of Meiotic Drive. Trends in Ecology & Evolution. PMID 26920473 DOI: 10.1016/j.tree.2016.02.001  1
2015 Hales KG, Korey CA, Larracuente AM, Roberts DM. Genetics on the Fly: A Primer on the Drosophila Model System. Genetics. 201: 815-42. PMID 26564900 DOI: 10.1534/genetics.115.183392  1
2015 Brand CL, Larracuente AM, Presgraves DC. Origin, evolution, and population genetics of the selfish Segregation Distorter gene duplication in European and African populations of Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 69: 1271-83. PMID 25828399 DOI: 10.1111/evo.12658  1
2015 Larracuente AM, Ferree PM. Simple method for fluorescence DNA in situ hybridization to squashed chromosomes. Journal of Visualized Experiments : Jove. 52288. PMID 25591075 DOI: 10.3791/52288  1
2015 Unckless RL, Larracuente AM, Clark AG. Sex-ratio meiotic drive and Y-linked resistance in Drosophila affinis. Genetics. 199: 831-40. PMID 25571899 DOI: 10.1534/genetics.114.173948  1
2014 Larracuente AM, Clark AG. Recent selection on the Y-to-dot translocation in Drosophila pseudoobscura. Molecular Biology and Evolution. 31: 846-56. PMID 24390701 DOI: 10.1093/molbev/msu002  1
2013 Larracuente AM, Clark AG. Surprising differences in the variability of Y chromosomes in African and cosmopolitan populations of Drosophila melanogaster. Genetics. 193: 201-14. PMID 23086221 DOI: 10.1534/genetics.112.146167  1
2012 Larracuente AM, Presgraves DC. The selfish Segregation Distorter gene complex of Drosophila melanogaster. Genetics. 192: 33-53. PMID 22964836 DOI: 10.1534/genetics.112.141390  1
2010 Larracuente AM, Noor MA, Clark AG. Translocation of Y-linked genes to the dot chromosome in Drosophila pseudoobscura. Molecular Biology and Evolution. 27: 1612-20. PMID 20147437 DOI: 10.1093/molbev/msq045  1
2009 Singh ND, Larracuente AM, Sackton TB, Clark AG. Comparative genomics on the drosophila phylogenetic tree Annual Review of Ecology, Evolution, and Systematics. 40: 459-480. DOI: 10.1146/annurev.ecolsys.110308.120214  1
2008 Larracuente AM, Sackton TB, Greenberg AJ, Wong A, Singh ND, Sturgill D, Zhang Y, Oliver B, Clark AG. Evolution of protein-coding genes in Drosophila. Trends in Genetics : Tig. 24: 114-23. PMID 18249460 DOI: 10.1016/j.tig.2007.12.001  1
2008 Singh ND, Larracuente AM, Clark AG. Contrasting the efficacy of selection on the X and autosomes in Drosophila. Molecular Biology and Evolution. 25: 454-67. PMID 18083702 DOI: 10.1093/molbev/msm275  1
2007 Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/nature06341  1
2006 Morris SR, Larracuente AM, Covino KM, Mustillo MS, Mattern KE, Liebner DA, Sheets HD. Utility of open population models: Limitations posed by parameter estimability in the study of migratory stopover Wilson Journal of Ornithology. 118: 513-526. DOI: 10.1676/05-073.1  1
2005 Morris SR, Liebner DA, Larracuente AM, Escamilla EM, Sheets HD. Multiple-day constancy as an alternative to pooling for estimating mark-recapture stopover length in nearctic-neotropical migrant landbirds Auk. 122: 319-328.  1
Low-probability matches
2018 Di L, Wan Z, Akther S, Ying C, Larracuente A, Li L, Di C, Nunez R, Cucura DM, Goddard NL, Krampis K, Qiu WG. Genotyping and quantifying Lyme pathogen strains by deep sequencing of the outer surface protein C () locus. Journal of Clinical Microbiology. PMID 30158192 DOI: 10.1128/JCM.00940-18  0.04
2020 Negm S, Greenberg A, Larracuente AM, Sproul JS. RepeatProfiler: A pipeline for visualization and comparative analysis of repetitive DNA profiles. Molecular Ecology Resources. PMID 33277787 DOI: 10.1111/1755-0998.13305  0.01
2018 Hernández Y, Bernstein R, Pagan P, Vargas L, McCaig W, Ramrattan G, Akther S, Larracuente A, Di L, Vieira FG, Qiu WG. BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines. Bmc Bioinformatics. 19: 76. PMID 29499649 DOI: 10.1186/s12859-018-2074-9  0.01
2016 Larracuente AM, Meller VH. Host-Symbiont Interactions: Male-Killers Exposed. Current Biology : Cb. 26: R429-31. PMID 27218854 DOI: 10.1016/j.cub.2016.03.057  0.01
2014 Larracuente AM. The organization and evolution of the Responder satellite in species of the Drosophila melanogaster group: dynamic evolution of a target of meiotic drive. Bmc Evolutionary Biology. 14: 233. PMID 25424548 DOI: 10.1186/s12862-014-0233-9  0.01
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