Yong Zhang - Publications

Affiliations: 
University of Chicago, Chicago, IL 

37 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Wang B, Zhang Y, Chen S, Xiang X, Wen J, Yi M, He B, Hu B. Diagnostic accuracy of cervical elastography in predicting preterm delivery: A systematic review and meta-analysis. Medicine. 98: e16449. PMID 31335700 DOI: 10.1097/MD.0000000000016449  1
2019 Zhou Q, Gao H, Zhang Y, Fan G, Xu H, Zhai J, Xu W, Chen Z, Zhang H, Liu S, Niu Y, Li W, Li W, Lin H, Chen S. A chromosome-level genome assembly of the giant grouper (Epinephelus lanceolatus) provides insights into its innate immunity and rapid growth. Molecular Ecology Resources. PMID 31230418 DOI: 10.1111/1755-0998.13048  1
2019 Zu J, Gu Y, Li Y, Li C, Zhang W, Zhang YE, Lee U, Zhang L, Long M. Topological evolution of coexpression networks by new gene integration maintains the hierarchical and modular structures in human ancestors. Science China. Life Sciences. PMID 30919280 DOI: 10.1007/s11427-019-9483-6  1
2019 Shao Y, Chen C, Shen H, He BZ, Yu D, Jiang S, Zhao S, Gao Z, Zhu Z, Chen X, Fu Y, Chen H, Gao G, Long M, Zhang YE. GenTree, an integrated resource for analyzing the evolution and function of primate-specific coding genes. Genome Research. PMID 30862647 DOI: 10.1101/gr.238733.118  1
2019 Zhang L, Ren Y, Yang T, Li G, Chen J, Gschwend AR, Yu Y, Hou G, Zi J, Zhou R, Wen B, Zhang J, Chougule K, Wang M, Copetti D, ... ... Zhang Y, et al. Rapid evolution of protein diversity by de novo origination in Oryza. Nature Ecology & Evolution. PMID 30858588 DOI: 10.1038/s41559-019-0822-5  1
2018 Hong Y, Chen S, Zhang Y, Chen Y, Yu L, Liu Y, Liu Y, Cheng H, Liu Y. Rapid identification of soil organic matter level via visible and near-infrared spectroscopy: Effects of two-dimensional correlation coefficient and extreme learning machine. The Science of the Total Environment. 644: 1232-1243. PMID 30743836 DOI: 10.1016/j.scitotenv.2018.06.319  1
2018 Li M, Liu F, Zhang F, Zhou W, Jiang X, Yang Y, Qu K, Wang Y, Ma Q, Wang T, Bai L, Wang Z, Song X, Zhu Y, Yuan R, ... ... Zhang Y, ... ... Zhang Y, et al. Genomic / mutations promote PD-L1-mediated immune escape in gallbladder cancer: a whole-exome sequencing analysis. Gut. PMID 29954840 DOI: 10.1136/gutjnl-2018-316039  1
2018 Yi X, Cheng J, Jiang Z, Hu W, Bie T, Gao D, Li D, Wu R, Li Y, Chen S, Cheng X, Liu J, Zhang Y, Cheng S. Genetic Analysis of Fusarium Head Blight Resistance in CIMMYT Bread Wheat Line C615 Using Traditional and Conditional QTL Mapping. Frontiers in Plant Science. 9: 573. PMID 29780395 DOI: 10.3389/fpls.2018.00573  1
2018 Lai X, Zhao H, Zhang Y, Guo K, Xu Y, Chen S, Zhang J. Intranasal Delivery of Copper Oxide Nanoparticles Induces Pulmonary Toxicity and Fibrosis in C57BL/6 mice. Scientific Reports. 8: 4499. PMID 29540716 DOI: 10.1038/s41598-018-22556-7  1
2017 Yan A, Chen Y, Chen S, Li S, Zhang Y, Jia J, Yu H, Liu L, Liu F, Hu C, Tang D, Chen T. Leptin Stimulates Prolactin mRNA Expression in the Goldfish Pituitary through a Combination of the PI3K/Akt/mTOR, MKK3/6/p38MAPK and MEK1/2/ERK1/2 Signalling Pathways. International Journal of Molecular Sciences. 18. PMID 29261147 DOI: 10.3390/ijms18122781  1
2017 Han C, Zhang Y, Gao P, Chen S, Liu X, Mi Y, Zhang J, Ma Y, Jiang W, Chang J. High-Yield Production of MoS2 and WS2 Quantum Sheets from Their Bulk Materials. Nano Letters. PMID 29148814 DOI: 10.1021/acs.nanolett.7b03968  1
2017 Huang H, Zhang H, Li D, Chen S, Zhou C, Li Q, He P, Fang L, Zhang Y, Li X, Zhou J, Sun L, Liu S, Guo Y, Huang Y, et al. Different inhibitory effects on the proliferation and apoptosis of human and laboratory Borna disease virus‑infected human neuroblastoma SH‑SY5Y cells in vitro. Molecular Medicine Reports. PMID 29115502 DOI: 10.3892/mmr.2017.8011  1
2017 Zhu Y, Mao C, Ge X, Wang Z, Lu P, Zhang Y, Chen S, Hu Y. Characterization of a minimal type of promoter containing the -10 element and a guanine at the -14 or -13 position in mycobacteria. Journal of Bacteriology. PMID 28784819 DOI: 10.1128/JB.00385-17  1
2017 Ma C, Li Y, Wang L, Wang Y, Zhang Y, Wang H, Chen S, Lu J. Intravoxel incoherent motion DWI of the pancreatic adenocarcinomas: monoexponential and biexponential apparent diffusion parameters and histopathological correlations. Cancer Imaging : the Official Publication of the International Cancer Imaging Society. 17: 12. PMID 28454564 DOI: 10.1186/s40644-017-0114-8  1
2017 Chen ZX, Oliver B, Zhang YE, Gao G, Long M. Expressed Structurally-stable Inverted Duplicates in Mammalian Genomes as Functional Noncoding Elements. Genome Biology and Evolution. PMID 28338961 DOI: 10.1093/gbe/evx054  1
2016 Tan S, Cardoso-Moreira M, Shi W, Zhang D, Huang J, Mao Y, Jia H, Zhang Y, Chen C, Shao Y, Leng L, Liu Z, Huang X, Long M, Zhang YE. LTR-mediated retroposition as a mechanism of RNA-based duplication in metazoans. Genome Research. 26: 1663-1675. PMID 27934698 DOI: 10.1101/gr.204925.116  1
2016 Qin Q, Mei S, Wu Q, Sun H, Li L, Taing L, Chen S, Li F, Liu T, Zang C, Xu H, Chen Y, Meyer CA, Zhang Y, Brown M, et al. ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline. Bmc Bioinformatics. 17: 404. PMID 27716038 DOI: 10.1186/s12859-016-1274-4  1
2016 Lu P, Wang Y, Zhang Y, Hu Y, Thompson KM, Chen S. RpoS-dependent sRNA RgsA regulates Fis and AcpP in Pseudomonas aeruginosa. Molecular Microbiology. PMID 27381272 DOI: 10.1111/mmi.13458  1
2014 Zhang YE, Long M. New genes contribute to genetic and phenotypic novelties in human evolution. Current Opinion in Genetics & Development. 29: 90-6. PMID 25218862 DOI: 10.1016/j.gde.2014.08.013  1
2014 Gao G, Vibranovski MD, Zhang L, Li Z, Liu M, Zhang YE, Li X, Zhang W, Fan Q, VanKuren NW, Long M, Wei L. A long-term demasculinization of X-linked intergenic noncoding RNAs in Drosophila melanogaster. Genome Research. 24: 629-38. PMID 24407956 DOI: 10.1101/gr.165837.113  0.32
2012 Ni X, Zhang YE, Nègre N, Chen S, Long M, White KP. Adaptive evolution and the birth of CTCF binding sites in the Drosophila genome. Plos Biology. 10: e1001420. PMID 23139640 DOI: 10.1371/journal.pbio.1001420  0.72
2012 Zhang YE, Landback P, Vibranovski M, Long M. New genes expressed in human brains: implications for annotating evolving genomes. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 982-91. PMID 23001763 DOI: 10.1002/bies.201200008  1
2012 Vibranovski MD, Zhang YE, Kemkemer C, VanKuren NW, Lopes HF, Karr TL, Long M. Segmental dataset and whole body expression data do not support the hypothesis that non-random movement is an intrinsic property of Drosophila retrogenes. Bmc Evolutionary Biology. 12: 169. PMID 22950647 DOI: 10.1186/1471-2148-12-169  0.64
2012 Vibranovski MD, Zhang YE, Kemkemer C, Lopes HF, Karr TL, Long M. Re-analysis of the larval testis data on meiotic sex chromosome inactivation revealed evidence for tissue-specific gene expression related to the drosophila X chromosome. Bmc Biology. 10: 49; author reply 50. PMID 22691264 DOI: 10.1186/1741-7007-10-49  0.64
2012 Chen S, Ni X, Krinsky BH, Zhang YE, Vibranovski MD, White KP, Long M. Reshaping of global gene expression networks and sex-biased gene expression by integration of a young gene. The Embo Journal. 31: 2798-809. PMID 22543869 DOI: 10.1038/emboj.2012.108  0.72
2011 Zhang YE, Landback P, Vibranovski MD, Long M. Accelerated recruitment of new brain development genes into the human genome. Plos Biology. 9: e1001179. PMID 22028629 DOI: 10.1371/journal.pbio.1001179  1
2011 Zhang YE, Vibranovski MD, Krinsky BH, Long M. A cautionary note for retrocopy identification: DNA-based duplication of intron-containing genes significantly contributes to the origination of single exon genes. Bioinformatics (Oxford, England). 27: 1749-53. PMID 21551137 DOI: 10.1093/bioinformatics/btr280  1
2011 Chen ZX, Zhang YE, Vibranovski M, Luo J, Gao G, Long M. Deficiency of X-linked inverted duplicates with male-biased expression and the underlying evolutionary mechanisms in the Drosophila genome. Molecular Biology and Evolution. 28: 2823-32. PMID 21546357 DOI: 10.1093/molbev/msr101  1
2010 Chen S, Zhang YE, Long M. New genes in Drosophila quickly become essential. Science (New York, N.Y.). 330: 1682-5. PMID 21164016 DOI: 10.1126/science.1196380  1
2010 Zhang YE, Vibranovski MD, Landback P, Marais GA, Long M. Chromosomal redistribution of male-biased genes in mammalian evolution with two bursts of gene gain on the X chromosome. Plos Biology. 8. PMID 20957185 DOI: 10.1371/journal.pbio.1000494  1
2010 Zhang YE, Vibranovski MD, Krinsky BH, Long M. Age-dependent chromosomal distribution of male-biased genes in Drosophila. Genome Research. 20: 1526-33. PMID 20798392 DOI: 10.1101/gr.107334.110  1
2010 Raleigh DR, Marchiando AM, Zhang Y, Shen L, Sasaki H, Wang Y, Long M, Turner JR. Tight junction-associated MARVEL proteins marveld3, tricellulin, and occludin have distinct but overlapping functions. Molecular Biology of the Cell. 21: 1200-13. PMID 20164257 DOI: 10.1091/mbc.E09-08-0734  1
2009 Zhang Y, Lu S, Zhao S, Zheng X, Long M, Wei L. Positive selection for the male functionality of a co-retroposed gene in the hominoids. Bmc Evolutionary Biology. 9: 252. PMID 19832993 DOI: 10.1186/1471-2148-9-252  1
2009 Zhu Z, Zhang Y, Long M. Extensive structural renovation of retrogenes in the evolution of the Populus genome. Plant Physiology. 151: 1943-51. PMID 19789289 DOI: 10.1104/pp.109.142984  1
2009 Vibranovski MD, Zhang Y, Long M. General gene movement off the X chromosome in the Drosophila genus. Genome Research. 19: 897-903. PMID 19251740 DOI: 10.1101/gr.088609.108  1
2008 Fan C, Zhang Y, Yu Y, Rounsley S, Long M, Wing RA. The subtelomere of Oryza sativa chromosome 3 short arm as a hot bed of new gene origination in rice. Molecular Plant. 1: 839-50. PMID 19825586 DOI: 10.1093/mp/ssn050  0.32
2007 Long MY, Zheng QC, Song ZF, Hu QG, Zhang Y. [Expression and biological activities of arresten in CHO cells]. Zhonghua Zhong Liu Za Zhi [Chinese Journal of Oncology]. 29: 249-52. PMID 17760248  0.32
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