| Year |
Citation |
Score |
| 2022 |
Sharma SP, Peterson T. Complex chromosomal rearrangements induced by transposons in maize. Genetics. PMID 36111993 DOI: 10.1093/genetics/iyac124 |
0.391 |
|
| 2022 |
Wang D, Yu C, Zhang J, Peterson T. Excision and reinsertion of Ac macrotransposons in maize. Genetics. PMID 35471241 DOI: 10.1093/genetics/iyac067 |
0.715 |
|
| 2021 |
Sharma SP, Zuo T, Peterson T. Transposon-induced inversions activate gene expression in the maize pericarp. Genetics. PMID 33905489 DOI: 10.1093/genetics/iyab062 |
0.34 |
|
| 2020 |
Su W, Zuo T, Peterson T. Ectopic Expression of a Maize Gene Is Induced by Composite Insertions Generated Through Alternative Transposition. Genetics. PMID 32988986 DOI: 10.1534/genetics.120.303592 |
0.405 |
|
| 2020 |
Wang D, Zhang J, Zuo T, Lisch D, Zhao M, Peterson T. Small RNA-Mediated Silencing of Transposons Is Initiated by Alternative Transposition in Maize. Genetics. PMID 32317287 DOI: 10.1534/Genetics.120.303264 |
0.628 |
|
| 2019 |
Ou S, Su W, Liao Y, Chougule K, Agda JRA, Hellinga AJ, Lugo CSB, Elliott TA, Ware D, Peterson T, Jiang N, Hirsch CN, Hufford MB. Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline. Genome Biology. 20: 275. PMID 31843001 DOI: 10.1186/S13059-019-1905-Y |
0.356 |
|
| 2019 |
Su W, Gu X, Peterson T. TIR-Learner, a new ensemble method for TIR Transposable Element annotation, provides evidence for abundant new transposable elements in maize genome. Molecular Plant. PMID 30802553 DOI: 10.1016/J.Molp.2019.02.008 |
0.439 |
|
| 2016 |
Xuan YH, Peterson T, Han CD. Generation and Analysis of Transposon Ac/Ds-Induced Chromosomal Rearrangements in Rice Plants. Methods in Molecular Biology (Clifton, N.J.). 1469: 49-61. PMID 27557685 DOI: 10.1007/978-1-4939-4931-1_4 |
0.501 |
|
| 2016 |
Zuo T, Zhang J, Lithio A, Dash S, Weber DF, Wise R, Nettleton D, Peterson T. Genes and Small RNA Transcripts Exhibit Dosage-Dependent Expression Pattern in Maize Copy-Number Alterations. Genetics. PMID 27129738 DOI: 10.1534/Genetics.116.188235 |
0.422 |
|
| 2015 |
Wang D, Yu C, Zuo T, Zhang J, Weber DF, Peterson T. Alternative Transposition Generates New Chimeric Genes and Segmental Duplications at the Maize p1 Locus. Genetics. PMID 26434719 DOI: 10.1534/Genetics.115.178210 |
0.742 |
|
| 2014 |
Zhang J, Zuo T, Wang D, Peterson T. Transposition-mediated DNA re-replication in maize. Elife. 3: e03724. PMID 25406063 DOI: 10.7554/Elife.03724 |
0.609 |
|
| 2014 |
Zhang J, Zuo T, Wang D, Peterson T. Author response: Transposition-mediated DNA re-replication in maize Elife. DOI: 10.7554/Elife.03724.021 |
0.529 |
|
| 2013 |
Zhang J, Zuo T, Peterson T. Generation of tandem direct duplications by reversed-ends transposition of maize ac elements. Plos Genetics. 9: e1003691. PMID 23966872 DOI: 10.1371/journal.pgen.1003691 |
0.422 |
|
| 2013 |
Wang D, Peterson T. Isolation of sequences flanking Ac insertion sites by Ac casting. Methods in Molecular Biology (Clifton, N.J.). 1057: 117-22. PMID 23918424 DOI: 10.1007/978-1-62703-568-2_8 |
0.635 |
|
| 2013 |
Krishnaswamy L, Peterson T. Survey of natural and transgenic gene markers used to monitor transposon activity. Methods in Molecular Biology (Clifton, N.J.). 1057: 43-58. PMID 23918420 DOI: 10.1007/978-1-62703-568-2_4 |
0.474 |
|
| 2013 |
Zhang C, Xie Q, Anderson RG, Ng G, Seitz NC, Peterson T, McClung CR, McDowell JM, Kong D, Kwak JM, Lu H. Crosstalk between the circadian clock and innate immunity in Arabidopsis. Plos Pathogens. 9: e1003370. PMID 23754942 DOI: 10.1371/Journal.Ppat.1003370 |
0.301 |
|
| 2012 |
Xuan YH, Zhang J, Peterson T, Han CD. Ac/Ds-induced chromosomal rearrangements in rice genomes. Mobile Genetic Elements. 2: 67-71. PMID 22934239 DOI: 10.4161/Mge.20264 |
0.502 |
|
| 2012 |
Yu C, Han F, Zhang J, Birchler J, Peterson T. A transgenic system for generation of transposon Ac/Ds-induced chromosome rearrangements in rice. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. 125: 1449-62. PMID 22798058 DOI: 10.1007/S00122-012-1925-4 |
0.689 |
|
| 2011 |
Xuan YH, Piao HL, Je BI, Park SJ, Park SH, Huang J, Zhang JB, Peterson T, Han CD. Transposon Ac/Ds-induced chromosomal rearrangements at the rice OsRLG5 locus. Nucleic Acids Research. 39: e149. PMID 21965541 DOI: 10.1093/Nar/Gkr718 |
0.514 |
|
| 2011 |
Yu C, Zhang J, Peterson T. Genome rearrangements in maize induced by alternative transposition of reversed ac/ds termini. Genetics. 188: 59-67. PMID 21339479 DOI: 10.1534/Genetics.111.126847 |
0.647 |
|
| 2011 |
Zhang J, Yu C, Krishnaswamy L, Peterson T. Transposable elements as catalysts for chromosome rearrangements. Methods in Molecular Biology (Clifton, N.J.). 701: 315-26. PMID 21181539 DOI: 10.1007/978-1-61737-957-4_18 |
0.641 |
|
| 2010 |
Yu C, Danilova T, Zhang J, Birchler J, Peterson T. Constructing defined chromosome segmental duplications in maize. Cytogenetic and Genome Research. 129: 72-81. PMID 20551616 DOI: 10.1159/000314554 |
0.638 |
|
| 2010 |
Zhang F, Maeder ML, Unger-Wallace E, Hoshaw JP, Reyon D, Christian M, Li X, Pierick CJ, Dobbs D, Peterson T, Joung JK, Voytas DF. High frequency targeted mutagenesis in Arabidopsis thaliana using zinc finger nucleases. Proceedings of the National Academy of Sciences of the United States of America. 107: 12028-33. PMID 20508152 DOI: 10.1073/Pnas.0914991107 |
0.613 |
|
| 2010 |
Yu C, Zhang J, Pulletikurti V, Weber DF, Peterson T. Spatial configuration of transposable element Ac termini affects their ability to induce chromosomal breakage in maize. The Plant Cell. 22: 744-54. PMID 20228246 DOI: 10.1105/Tpc.109.070052 |
0.637 |
|
| 2010 |
Krishnaswamy L, Zhang J, Peterson T. Fusion of reverse-oriented Ds termini following abortive transposition in Arabidopsis: implications for the mechanism of Ac/Ds transposition. Plant Cell Reports. 29: 413-7. PMID 20179935 DOI: 10.1007/S00299-010-0832-X |
0.459 |
|
| 2009 |
Zhang J, Yu C, Pulletikurti V, Lamb J, Danilova T, Weber DF, Birchler J, Peterson T. Alternative Ac/Ds transposition induces major chromosomal rearrangements in maize. Genes & Development. 23: 755-65. PMID 19299561 DOI: 10.1101/Gad.1776909 |
0.643 |
|
| 2009 |
Gray J, Bevan M, Brutnell T, Buell CR, Cone K, Hake S, Jackson D, Kellogg E, Lawrence C, McCouch S, Mockler T, Moose S, Paterson A, Peterson T, Rokshar D, et al. A recommendation for naming transcription factor proteins in the grasses. Plant Physiology. 149: 4-6. PMID 19126689 DOI: 10.1104/Pp.108.128504 |
0.334 |
|
| 2008 |
Krishnaswamy L, Zhang J, Peterson T. Reversed end Ds element: a novel tool for chromosome engineering in Arabidopsis. Plant Molecular Biology. 68: 399-411. PMID 18685955 DOI: 10.1007/S11103-008-9377-6 |
0.498 |
|
| 2007 |
Sekhon RS, Peterson T, Chopra S. Epigenetic modifications of distinct sequences of the p1 regulatory gene specify tissue-specific expression patterns in maize. Genetics. 175: 1059-70. PMID 17179091 DOI: 10.1534/Genetics.106.066134 |
0.433 |
|
| 2006 |
Zhang J, Zhang F, Peterson T. Transposition of reversed Ac element ends generates novel chimeric genes in maize. Plos Genetics. 2: e164. PMID 17029561 DOI: 10.1371/Journal.Pgen.0020164 |
0.569 |
|
| 2006 |
Zhang F, Peterson T. Gene conversion between direct noncoding repeats promotes genetic and phenotypic diversity at a regulatory locus of Zea mays (L.). Genetics. 174: 753-62. PMID 16816430 DOI: 10.1534/Genetics.105.053942 |
0.541 |
|
| 2006 |
Boddu J, Jiang C, Sangar V, Olson T, Peterson T, Chopra S. Comparative structural and functional characterization of sorghum and maize duplications containing orthologous myb transcription regulators of 3-deoxyflavonoid biosynthesis. Plant Molecular Biology. 60: 185-99. PMID 16429259 DOI: 10.1007/S11103-005-3568-1 |
0.65 |
|
| 2005 |
Cocciolone SM, Nettleton D, Snook ME, Peterson T. Transformation of maize with the p1 transcription factor directs production of silk maysin, a corn earworm resistance factor, in concordance with a hierarchy of floral organ pigmentation. Plant Biotechnology Journal. 3: 225-35. PMID 17173622 DOI: 10.1111/J.1467-7652.2005.00120.X |
0.377 |
|
| 2005 |
Zhang J, Peterson T. A segmental deletion series generated by sister-chromatid transposition of Ac transposable elements in maize. Genetics. 171: 333-44. PMID 15965263 DOI: 10.1534/Genetics.104.035576 |
0.553 |
|
| 2005 |
Zhang F, Peterson T. Comparisons of maize pericarp color1 alleles reveal paralogous gene recombination and an organ-specific enhancer region. The Plant Cell. 17: 903-14. PMID 15722466 DOI: 10.1105/Tpc.104.029660 |
0.484 |
|
| 2004 |
Zhang J, Peterson T. Transposition of reversed Ac element ends generates chromosome rearrangements in maize. Genetics. 167: 1929-37. PMID 15342530 DOI: 10.1534/Genetics.103.026229 |
0.497 |
|
| 2004 |
Jiang C, Gu X, Peterson T. Identification of conserved gene structures and carboxy-terminal motifs in the Myb gene family of Arabidopsis and Oryza sativa L. ssp. indica. Genome Biology. 5: R46. PMID 15239831 DOI: 10.1186/Gb-2004-5-7-R46 |
0.601 |
|
| 2004 |
Jiang C, Gu J, Chopra S, Gu X, Peterson T. Ordered origin of the typical two- and three-repeat Myb genes. Gene. 326: 13-22. PMID 14729259 DOI: 10.1016/J.Gene.2003.09.049 |
0.59 |
|
| 2003 |
Zhang P, Wang Y, Zhang J, Maddock S, Snook M, Peterson T. A maize QTL for silk maysin levels contains duplicated Myb-homologous genes which jointly regulate flavone biosynthesis. Plant Molecular Biology. 52: 1-15. PMID 12825685 DOI: 10.1023/A:1023942819106 |
0.428 |
|
| 2003 |
Sidorenko L, Bruce W, Maddock S, Tagliani L, Li X, Daniels M, Peterson T. Functional analysis of two matrix attachment region (MAR) elements in transgenic maize plants. Transgenic Research. 12: 137-54. PMID 12739882 DOI: 10.1023/A:1022908614356 |
0.448 |
|
| 2003 |
Chopra S, Cocciolone SM, Bushman S, Sangar V, McMullen MD, Peterson T. The maize unstable factor for orange1 is a dominant epigenetic modifier of a tissue specifically silent allele of pericarp color1. Genetics. 163: 1135-46. PMID 12663550 |
0.31 |
|
| 2002 |
Xiao Y-, Peterson T. Ac transposition is impaired by a small terminal deletion. Molecular Genetics and Genomics. 266: 720-731. PMID 11810245 DOI: 10.1007/S00438-001-0600-2 |
0.43 |
|
| 2002 |
Chopra S, Gevens A, Svabek C, Wood KV, Peterson T, Nicholson RL. Excision of the Candystripe1 transposon from a hyper-mutable Y1-cs allele shows that the sorghumY1 gene controls the biosynthesis of both 3-deoxyanthocyanidin phytoalexins and phlobaphene pigments Physiological and Molecular Plant Pathology. 60: 321-330. DOI: 10.1006/Pmpp.2002.0411 |
0.422 |
|
| 2001 |
Cocciolone SM, Chopra S, Flint-Garcia SA, McMullen MD, Peterson T. Tissue-specific patterns of a maize Myb transcription factor are epigenetically regulated. The Plant Journal : For Cell and Molecular Biology. 27: 467-78. PMID 11576430 DOI: 10.1046/J.1365-313X.2001.01124.X |
0.42 |
|
| 2001 |
Sidorenko LV, Peterson T. Transgene-Induced Silencing Identifies Sequences Involved in the Establishment of Paramutation of the Maize p1 Gene The Plant Cell. 13: 319-335. PMID 11226188 DOI: 10.1105/Tpc.13.2.319 |
0.402 |
|
| 2001 |
Zhang P, Chopra S, Peterson T. A segmental gene duplication generated differentially expressed myb-homologous genes in maize. The Plant Cell. 12: 2311-2322. PMID 11148280 DOI: 10.1105/Tpc.12.12.2311 |
0.421 |
|
| 2000 |
Sidorenko LV, Li X, Cocciolone SM, Chopra S, Tagliani L, Bowen B, Daniels M, Peterson T. Complex structure of a maize Myb gene promoter: functional analysis in transgenic plants. The Plant Journal : For Cell and Molecular Biology. 22: 471-82. PMID 10886767 DOI: 10.1046/J.1365-313X.2000.00750.X |
0.472 |
|
| 2000 |
Xiao YL, Peterson T. Intrachromosomal homologous recombination in Arabidopsis induced by a maize transposon. Molecular Genetics and Genomics. 263: 22-29. PMID 10732670 DOI: 10.1007/Pl00008672 |
0.474 |
|
| 1999 |
Chopra S, Brendel V, Zhang J, Axtell JD, Peterson T. Molecular characterization of a mutable pigmentation phenotype and isolation of the first active transposable element from Sorghum bicolor. Proceedings of the National Academy of Sciences of the United States of America. 96: 15330-5. PMID 10611384 DOI: 10.1073/Pnas.96.26.15330 |
0.494 |
|
| 1999 |
Sidorenko L, Li X, Tagliani L, Bowen B, Peterson T. Characterization of the regulatory elements of the maize P-rr gene by transient expression assays. Plant Molecular Biology. 39: 11-9. PMID 10080705 DOI: 10.1023/A:1006172815663 |
0.417 |
|
| 1996 |
Chopra S, Athma P, Peterson T. Alleles of the maize P gene with distinct tissue specificities encode Myb-homologous proteins with C-terminal replacements. The Plant Cell. 8: 1149-58. PMID 8768374 DOI: 10.1105/Tpc.8.7.1149 |
0.411 |
|
| 1994 |
Grotewold E, Drummond BJ, Bowen B, Peterson T. The myb-homologous P gene controls phlobaphene pigmentation in maize floral organs by directly activating a flavonoid biosynthetic gene subset. Cell. 76: 543-53. PMID 8313474 DOI: 10.1016/0092-8674(94)90117-1 |
0.428 |
|
| 1994 |
Grotewold E, Peterson T. Isolation and characterization of a maize gene encoding chalcone flavonone isomerase. Molecular & General Genetics : Mgg. 242: 1-8. PMID 8277939 DOI: 10.1007/Bf00277341 |
0.44 |
|
| 1991 |
Grotewold E, Athma P, Peterson T. Alternatively spliced products of the maize P gene encode proteins with homology to the DNA-binding domain of myb-like transcription factors. Proceedings of the National Academy of Sciences of the United States of America. 88: 4587-91. PMID 2052542 DOI: 10.1073/Pnas.88.11.4587 |
0.407 |
|
| 1991 |
Grotewold E, Athma P, Peterson T. A possible hot spot for Ac insertion in the maize P gene. Molecular & General Genetics : Mgg. 230: 329-31. PMID 1660568 DOI: 10.1007/Bf00290684 |
0.465 |
|
| 1989 |
Lechelt C, Peterson T, Laird A, Chen J, Dellaporta SL, Dennis E, Peacock WJ, Starlinger P. Isolation and molecular analysis of the maize P locus. Molecular Genetics and Genomics. 219: 225-234. PMID 2559311 DOI: 10.1007/Bf00261181 |
0.472 |
|
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