Erkan Karakas, Ph.D. - Publications

Affiliations: 
2006 Stony Brook University, Stony Brook, NY, United States 
 2007-2016 Cold Spring Harbor Laboratory, Cold Spring Harbor, NY 
 2016- Vanderbilt University, Nashville, TN 
Area:
Molecular Biology, Pharmacology

16 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Azumaya CM, Linton EA, Risener CJ, Nakagawa T, Karakas E. Cryo-EM structure of human type-3 inositol triphosphate receptor reveals the presence of a self-binding peptide that acts as an antagonist. The Journal of Biological Chemistry. PMID 31915246 DOI: 10.1074/Jbc.Ra119.011570  0.45
2018 Regan MC, Grant T, McDaniel MJ, Karakas E, Zhang J, Traynelis SF, Grigorieff N, Furukawa H. Structural Mechanism of Functional Modulation by Gene Splicing in NMDA Receptors. Neuron. PMID 29656875 DOI: 10.1016/J.Neuron.2018.03.034  0.821
2016 Romero-Hernandez A, Simorowski N, Karakas E, Furukawa H. Molecular Basis for Subtype Specificity and High-Affinity Zinc Inhibition in the GluN1-GluN2A NMDA Receptor Amino-Terminal Domain. Neuron. PMID 27916457 DOI: 10.1016/J.Neuron.2016.11.006  0.741
2016 Tajima N, Karakas E, Grant T, Simorowski N, Diaz-Avalos R, Grigorieff N, Furukawa H. Activation of NMDA receptors and the mechanism of inhibition by ifenprodil. Nature. PMID 27135925 DOI: 10.1038/Nature17679  0.779
2015 Karakas E, Regan MC, Furukawa H. Emerging structural insights into the function of ionotropic glutamate receptors. Trends in Biochemical Sciences. 40: 328-37. PMID 25941168 DOI: 10.1016/J.Tibs.2015.04.002  0.804
2014 Khatri A, Burger PB, Swanger SA, Hansen KB, Zimmerman S, Karakas E, Liotta DC, Furukawa H, Snyder JP, Traynelis SF. Structural determinants and mechanism of action of a GluN2C-selective NMDA receptor positive allosteric modulator. Molecular Pharmacology. 86: 548-60. PMID 25205677 DOI: 10.1124/Mol.114.094516  0.793
2014 Karakas E, Furukawa H. Crystal structure of a heterotetrameric NMDA receptor ion channel. Science (New York, N.Y.). 344: 992-7. PMID 24876489 DOI: 10.1126/Science.1251915  0.799
2012 Burger PB, Yuan H, Karakas E, Geballe M, Furukawa H, Liotta DC, Snyder JP, Traynelis SF. Mapping the binding of GluN2B-selective N-methyl-D-aspartate receptor negative allosteric modulators. Molecular Pharmacology. 82: 344-59. PMID 22596351 DOI: 10.1124/Mol.112.078568  0.741
2011 Karakas E, Simorowski N, Furukawa H. Subunit arrangement and phenylethanolamine binding in GluN1/GluN2B NMDA receptors. Nature. 475: 249-53. PMID 21677647 DOI: 10.1038/Nature10180  0.803
2010 Karakas E, Simorowski N, Furukawa H. Structural Insights into Allosteric Modulation of NMDA Receptors Through the Amino-Terminal Domain Biophysical Journal. 98: 609a. DOI: 10.1016/J.Bpj.2009.12.3322  0.809
2009 Karakas E, Simorowski N, Furukawa H. Structure of the zinc-bound amino-terminal domain of the NMDA receptor NR2B subunit. The Embo Journal. 28: 3910-20. PMID 19910922 DOI: 10.1038/Emboj.2009.338  0.817
2007 Karakas E, Truglio JJ, Croteau D, Rhau B, Wang L, Van Houten B, Kisker C. Structure of the C-terminal half of UvrC reveals an RNase H endonuclease domain with an Argonaute-like catalytic triad. The Embo Journal. 26: 613-22. PMID 17245438 DOI: 10.1038/Sj.Emboj.7601497  0.761
2006 Truglio JJ, Karakas E, Rhau B, Wang H, DellaVecchia MJ, Van Houten B, Kisker C. Structural basis for DNA recognition and processing by UvrB. Nature Structural & Molecular Biology. 13: 360-4. PMID 16532007 DOI: 10.1038/Nsmb1072  0.725
2005 Karakas E, Kisker C. Structural analysis of missense mutations causing isolated sulfite oxidase deficiency. Dalton Transactions (Cambridge, England : 2003). 3459-63. PMID 16234925 DOI: 10.1039/B505789M  0.529
2005 Karakas E, Wilson HL, Graf TN, Xiang S, Jaramillo-Busquets S, Rajagopalan KV, Kisker C. Structural insights into sulfite oxidase deficiency. The Journal of Biological Chemistry. 280: 33506-15. PMID 16048997 DOI: 10.1074/Jbc.M505035200  0.576
2005 Truglio JJ, Rhau B, Croteau DL, Wang L, Skorvaga M, Karakas E, DellaVecchia MJ, Wang H, Van Houten B, Kisker C. Structural insights into the first incision reaction during nucleotide excision repair. The Embo Journal. 24: 885-94. PMID 15692561 DOI: 10.1038/Sj.Emboj.7600568  0.76
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