| Year |
Citation |
Score |
| 2020 |
Gupta M, Concepcion CP, Fahey CG, Keshishian H, Bhutkar A, Brainson CF, Sanchez-Rivera FJ, Pessina P, Kim JY, Simoneau A, Paschini M, Beytagh MC, Stanclift CR, Schenone M, Mani DR, et al. BRG1 loss predisposes lung cancers to replicative stress and ATR dependency. Cancer Research. PMID 32690724 DOI: 10.1158/0008-5472.Can-20-1744 |
0.339 |
|
| 2020 |
Mollaoglu G, Jones A, Wait S, Mukhopadhyay A, Jeong S, Arya R, Camolotto S, Mosbruger T, Stubben C, Conley C, Bhutkar A, Vahrenkamp J, Berrett K, Cessna M, Lane T, et al. Abstract B72: Lineage specifiers SOX2 and NKX2-1 inversely regulate tumor cell fate and neutrophil recruitment in lung cancer Cancer Immunology Research. 8. DOI: 10.1158/2326-6074.Tumimm18-B72 |
0.407 |
|
| 2020 |
Jin C, Zhao C, Lagoudas G, Bhutkar A, Hu B, Jacks T. Abstract A63: Commensal microbiota promote lung tumorigenesis via γδ T cells Cancer Immunology Research. 8. DOI: 10.1158/2326-6074.Tumimm18-A63 |
0.342 |
|
| 2019 |
Ng SR, Rideout WM, Akama-Garren EH, Bhutkar A, Mercer KL, Schenkel JM, Bronson RT, Jacks T. CRISPR-mediated modeling and functional validation of candidate tumor suppressor genes in small cell lung cancer. Proceedings of the National Academy of Sciences of the United States of America. PMID 31871154 DOI: 10.1073/Pnas.1821893117 |
0.423 |
|
| 2019 |
Li A, Herbst RH, Canner D, Schenkel JM, Smith OC, Kim JY, Hillman M, Bhutkar A, Cuoco MS, Rappazzo CG, Rogers P, Dang C, Jerby-Arnon L, Rozenblatt-Rosen O, Cong L, et al. IL-33 Signaling Alters Regulatory T Cell Diversity in Support of Tumor Development. Cell Reports. 29: 2998-3008.e8. PMID 31801068 DOI: 10.1016/J.Celrep.2019.10.120 |
0.338 |
|
| 2019 |
Li L, Ng SR, Colón CI, Drapkin BJ, Hsu PP, Li Z, Nabel CS, Lewis CA, Romero R, Mercer KL, Bhutkar A, Phat S, Myers DT, Muzumdar MD, Westcott PMK, et al. Identification of DHODH as a therapeutic target in small cell lung cancer. Science Translational Medicine. 11. PMID 31694929 DOI: 10.1126/Scitranslmed.Aaw7852 |
0.388 |
|
| 2019 |
Jin C, Lagoudas GK, Zhao C, Bullman S, Bhutkar A, Hu B, Ameh S, Sandel D, Liang XS, Mazzilli S, Whary MT, Meyerson M, Germain R, Blainey PC, Fox JG, et al. Commensal Microbiota Promote Lung Cancer Development via γδ T Cells. Cell. PMID 30712876 DOI: 10.1016/J.Cell.2018.12.040 |
0.334 |
|
| 2018 |
Mollaoglu G, Jones A, Wait SJ, Mukhopadhyay A, Jeong S, Arya R, Camolotto SA, Mosbruger TL, Stubben CJ, Conley CJ, Bhutkar A, Vahrenkamp JM, Berrett KC, Cessna MH, Lane TE, et al. The Lineage-Defining Transcription Factors SOX2 and NKX2-1 Determine Lung Cancer Cell Fate and Shape the Tumor Immune Microenvironment. Immunity. 49: 764-779.e9. PMID 30332632 DOI: 10.1016/J.Immuni.2018.09.020 |
0.375 |
|
| 2018 |
Fiedler ERC, Bhutkar A, Lawler E, Besada R, Hemann MT. In vivo RNAi screening identifies as a target for combination therapy with TKIs in BCP-ALL. Blood Advances. 2: 1229-1242. PMID 29853524 DOI: 10.1182/Bloodadvances.2017015610 |
0.317 |
|
| 2018 |
Li L, Zeng Q, Bhutkar A, Galván JA, Karamitopoulou E, Noordermeer D, Peng MW, Piersigilli A, Perren A, Zlobec I, Robinson H, Iruela-Arispe ML, Hanahan D. GKAP Acts as a Genetic Modulator of NMDAR Signaling to Govern Invasive Tumor Growth. Cancer Cell. PMID 29606348 DOI: 10.1016/J.Ccell.2018.02.011 |
0.365 |
|
| 2018 |
Romero R, Sayin VI, Shawn DM, Bauer M, Singh SX, LeBoeuf S, Karakousi TR, Ellis DC, Bhutkar A, Sanchez-Rivera F, Subbaraj L, Martinez B, Bronson RT, Prigge JR, Schmidt EE, et al. Abstract A43: Loss of Keap1 promotes KRAS-driven lung cancer and results in genotype-specific vulnerabilities Cancer Research. 78. DOI: 10.1158/1538-7445.Mousemodels17-A43 |
0.368 |
|
| 2018 |
Muzumdar MD, Dorans KJ, Chung KM, Bhutkar A, Fuchs C, Jacks T. Abstract A05: Investigating mechanisms of obesity-mediated pancreatic cancer progression Cancer Research. 78. DOI: 10.1158/1538-7445.Mousemodels17-A05 |
0.33 |
|
| 2018 |
Smith OC, Westcott PM, Canner DA, Rideout WM, Bhutkar A, Beytagh MC, Tammela T, Jacks TE. Abstract LB-284: Engineering a hypermutant mouse model of NSCLC to modulate immune response Cancer Research. 78. DOI: 10.1158/1538-7445.Am2018-Lb-284 |
0.354 |
|
| 2017 |
Chen PY, Muzumdar MD, Dorans KJ, Robbins RA, Bhutkar A, Del Rosario AM, Mertins P, Qiao J, Schäfer C, Gertler FB, Carr SA, Jacks T. Adaptive and reversible resistance to Kras inhibition in pancreatic cancer cells. Cancer Research. PMID 29279356 DOI: 10.1158/0008-5472.Can-17-2129 |
0.35 |
|
| 2017 |
Roper J, Tammela T, Cetinbas NM, Akkad A, Roghanian A, Rickelt S, Almeqdadi M, Wu K, Oberli MA, Sánchez-Rivera F, Park YK, Liang X, Eng G, Taylor MS, Azimi R, ... ... Bhutkar A, et al. Corrigendum: In vivo genome editing and organoid transplantation models of colorectal cancer and metastasis. Nature Biotechnology. 35: 1211. PMID 29220013 DOI: 10.1038/Nbt1217-1211A |
0.308 |
|
| 2017 |
Muzumdar MD, Chen PY, Dorans KJ, Chung KM, Bhutkar A, Hong E, Noll EM, Sprick MR, Trumpp A, Jacks T. Survival of pancreatic cancer cells lacking KRAS function. Nature Communications. 8: 1090. PMID 29061961 DOI: 10.1038/S41467-017-00942-5 |
0.364 |
|
| 2017 |
Romero R, Sayin VI, Davidson SM, Bauer MR, Singh SX, LeBoeuf SE, Karakousi TR, Ellis DC, Bhutkar A, Sánchez-Rivera FJ, Subbaraj L, Martinez B, Bronson RT, Prigge JR, Schmidt EE, et al. Keap1 loss promotes Kras-driven lung cancer and results in dependence on glutaminolysis. Nature Medicine. PMID 28967920 DOI: 10.1038/Nm.4407 |
0.377 |
|
| 2017 |
Gocheva V, Naba A, Bhutkar A, Guardia T, Miller KM, Li CM, Dayton TL, Sanchez-Rivera FJ, Kim-Kiselak C, Jailkhani N, Winslow MM, Del Rosario A, Hynes RO, Jacks T. Quantitative proteomics identify Tenascin-C as a promoter of lung cancer progression and contributor to a signature prognostic of patient survival. Proceedings of the National Academy of Sciences of the United States of America. PMID 28652369 DOI: 10.1073/Pnas.1707054114 |
0.382 |
|
| 2017 |
Soto-Feliciano YM, Bartlebaugh JME, Liu Y, Sánchez-Rivera FJ, Bhutkar A, Weintraub AS, Buenrostro JD, Cheng CS, Regev A, Jacks TE, Young RA, Hemann MT. PHF6 regulates phenotypic plasticity through chromatin organization within lineage-specific genes. Genes & Development. PMID 28607179 DOI: 10.1101/Gad.295857.117 |
0.348 |
|
| 2017 |
Tammela T, Sanchez-Rivera FJ, Cetinbas NM, Wu K, Joshi NS, Helenius K, Park Y, Azimi R, Kerper NR, Wesselhoeft RA, Gu X, Schmidt L, Cornwall-Brady M, Yilmaz ÖH, Xue W, ... ... Bhutkar A, et al. A Wnt-producing niche drives proliferative potential and progression in lung adenocarcinoma. Nature. PMID 28489818 DOI: 10.1038/Nature22334 |
0.33 |
|
| 2017 |
Roper J, Tammela T, Cetinbas NM, Akkad A, Roghanian A, Rickelt S, Almeqdadi M, Wu K, Oberli MA, Sánchez-Rivera F, Park YK, Liang X, Eng G, Taylor MS, Azimi R, ... ... Bhutkar A, et al. In vivo genome editing and organoid transplantation models of colorectal cancer and metastasis. Nature Biotechnology. PMID 28459449 DOI: 10.1038/Nbt.3836 |
0.367 |
|
| 2017 |
Sasi NK, Bhutkar A, Lanning NJ, MacKeigan JP, Weinreich M. DDK Promotes Tumor Chemoresistance and Survival via Multiple Pathways. Neoplasia (New York, N.Y.). 19: 439-450. PMID 28448802 DOI: 10.1016/J.Neo.2017.03.001 |
0.368 |
|
| 2017 |
Li A, Bhutkar A, Joshi NS, Jacks TE. Abstract A66: Molecular profiling of regulatory T cells in a genetic mouse model of lung adenocarcinoma Cancer Immunology Research. 5. DOI: 10.1158/2326-6074.Tumimm16-A66 |
0.373 |
|
| 2016 |
McFadden DG, Politi K, Bhutkar A, Chen FK, Song X, Pirun M, Santiago PM, Kim-Kiselak C, Platt JT, Lee E, Hodges E, Rosebrock AP, Bronson RT, Socci ND, Hannon GJ, et al. Mutational landscape of EGFR-, MYC-, and Kras-driven genetically engineered mouse models of lung adenocarcinoma. Proceedings of the National Academy of Sciences of the United States of America. PMID 27702896 DOI: 10.1073/Pnas.1613601113 |
0.375 |
|
| 2016 |
Papagiannakopoulos T, Bauer MR, Davidson SM, Heimann M, Subbaraj L, Bhutkar A, Bartlebaugh J, Vander Heiden MG, Jacks T. Circadian Rhythm Disruption Promotes Lung Tumorigenesis. Cell Metabolism. PMID 27476975 DOI: 10.1016/J.Cmet.2016.07.001 |
0.352 |
|
| 2016 |
Ferretti R, Bhutkar A, McNamara MC, Lees JA. BMI1 induces an invasive signature in melanoma that promotes metastasis and chemoresistance. Genes & Development. 30: 18-33. PMID 26679841 DOI: 10.1101/Gad.267757.115 |
0.33 |
|
| 2016 |
Soto-Feliciano YM, Bartlebaugh JM, Liu Y, Sánchez-Rivera FJ, Weintraub AS, Bhutkar A, Jacks TE, Young RA, Hemann MT. Abstract A44: The role of PHF6 in maintaining pre-B cell commitment in B-cell acute lymphoblastic leukemia Cancer Research. 76. DOI: 10.1158/1538-7445.Chromepi15-A44 |
0.327 |
|
| 2015 |
Li CM, Gocheva V, Oudin MJ, Bhutkar A, Wang SY, Date SR, Ng SR, Whittaker CA, Bronson RT, Snyder EL, Gertler FB, Jacks T. Foxa2 and Cdx2 cooperate with Nkx2-1 to inhibit lung adenocarcinoma metastasis. Genes & Development. 29: 1850-62. PMID 26341558 DOI: 10.1101/Gad.267393.115 |
0.372 |
|
| 2015 |
Boutz PL, Bhutkar A, Sharp PA. Detained introns are a novel, widespread class of post-transcriptionally spliced introns. Genes & Development. 29: 63-80. PMID 25561496 DOI: 10.1101/Gad.247361.114 |
0.366 |
|
| 2015 |
Terry MR, Arya R, Mukhopadhyay A, Berrett KC, Clair PM, Witt B, Salama ME, Bhutkar A, Oliver TG. Caspase-2 impacts lung tumorigenesis and chemotherapy response in vivo. Cell Death and Differentiation. 22: 719-30. PMID 25301067 DOI: 10.1038/Cdd.2014.159 |
0.338 |
|
| 2014 |
Sánchez-Rivera FJ, Papagiannakopoulos T, Romero R, Tammela T, Bauer MR, Bhutkar A, Joshi NS, Subbaraj L, Bronson RT, Xue W, Jacks T. Rapid modelling of cooperating genetic events in cancer through somatic genome editing. Nature. 516: 428-31. PMID 25337879 DOI: 10.1038/Nature13906 |
0.418 |
|
| 2014 |
Shao DD, Xue W, Krall EB, Bhutkar A, Piccioni F, Wang X, Schinzel AC, Sood S, Rosenbluh J, Kim JW, Zwang Y, Roberts TM, Root DE, Jacks T, Hahn WC. KRAS and YAP1 converge to regulate EMT and tumor survival. Cell. 158: 171-84. PMID 24954536 DOI: 10.1016/J.Cell.2014.06.004 |
0.355 |
|
| 2014 |
Chen S, Xue Y, Wu X, Le C, Bhutkar A, Bell EL, Zhang F, Langer R, Sharp PA. Global microRNA depletion suppresses tumor angiogenesis. Genes & Development. 28: 1054-67. PMID 24788094 DOI: 10.1101/Gad.239681.114 |
0.339 |
|
| 2014 |
McFadden DG, Vernon A, Santiago PM, Martinez-McFaline R, Bhutkar A, Crowley DM, McMahon M, Sadow PM, Jacks T. p53 constrains progression to anaplastic thyroid carcinoma in a Braf-mutant mouse model of papillary thyroid cancer. Proceedings of the National Academy of Sciences of the United States of America. 111: E1600-9. PMID 24711431 DOI: 10.1073/Pnas.1404357111 |
0.326 |
|
| 2014 |
McFadden DG, Papagiannakopoulos T, Taylor-Weiner A, Stewart C, Carter SL, Cibulskis K, Bhutkar A, McKenna A, Dooley A, Vernon A, Sougnez C, Malstrom S, Heimann M, Park J, Chen F, et al. Genetic and clonal dissection of murine small cell lung carcinoma progression by genome sequencing. Cell. 156: 1298-311. PMID 24630729 DOI: 10.1016/J.Cell.2014.02.031 |
0.436 |
|
| 2013 |
Gurtan AM, Ravi A, Rahl PB, Bosson AD, JnBaptiste CK, Bhutkar A, Whittaker CA, Young RA, Sharp PA. Let-7 represses Nr6a1 and a mid-gestation developmental program in adult fibroblasts. Genes & Development. 27: 941-54. PMID 23630078 DOI: 10.1101/Gad.215376.113 |
0.302 |
|
| 2013 |
McFadden DG, Papagiannakopoulos T, Cibulskis K, Stewart C, Carter S, Taylor-Weiner A, Bhutkar A, Sougnez C, Dooley A, Shefler E, Lander E, Gabriel S, Getz G, Jacks T. Abstract 1084: Comprehensive genomic analysis of murine small cell lung carcinoma uncovers recurrent Pten alterations that drive tumor progression and alter tumor genome evolution. Cancer Research. 73: 1084-1084. DOI: 10.1158/1538-7445.Am2013-1084 |
0.449 |
|
| 2012 |
Ravi A, Gurtan AM, Kumar MS, Bhutkar A, Chin C, Lu V, Lees JA, Jacks T, Sharp PA. Proliferation and tumorigenesis of a murine sarcoma cell line in the absence of DICER1. Cancer Cell. 21: 848-55. PMID 22698408 DOI: 10.1016/J.Ccr.2012.04.037 |
0.32 |
|
| 2012 |
Sánchez-Rivera FJ, Feldser DM, Doench J, Bhutkar A, Meacham CE, Root DE, Hemann MT, Jacks T. Abstract 2957: Uncovering tumor-specific components of the p53 pathway using mouse models and RNAi Cancer Research. 72: 2957-2957. DOI: 10.1158/1538-7445.Am2012-2957 |
0.36 |
|
| 2010 |
Oliver TG, Mercer KL, Sayles LC, Burke JR, Mendus D, Lovejoy KS, Cheng MH, Subramanian A, Mu D, Powers S, Crowley D, Bronson RT, Whittaker CA, Bhutkar A, Lippard SJ, et al. Chronic cisplatin treatment promotes enhanced damage repair and tumor progression in a mouse model of lung cancer. Genes & Development. 24: 837-52. PMID 20395368 DOI: 10.1101/Gad.1897010 |
0.39 |
|
| 2008 |
Schaeffer SW, Bhutkar A, McAllister BF, Matsuda M, Matzkin LM, O'Grady PM, Rohde C, Valente VL, Aguadé M, Anderson WW, Edwards K, Garcia AC, Goodman J, Hartigan J, Kataoka E, et al. Polytene chromosomal maps of 11 Drosophila species: the order of genomic scaffolds inferred from genetic and physical maps. Genetics. 179: 1601-55. PMID 18622037 DOI: 10.1534/Genetics.107.086074 |
0.496 |
|
| 2008 |
Bhutkar A, Schaeffer SW, Russo SM, Xu M, Smith TF, Gelbart WM. Chromosomal rearrangement inferred from comparisons of 12 Drosophila genomes. Genetics. 179: 1657-80. PMID 18622036 DOI: 10.1534/Genetics.107.086108 |
0.532 |
|
| 2007 |
Bhutkar A, Gelbart WM, Smith TF. Inferring genome-scale rearrangement phylogeny and ancestral gene order: a Drosophila case study. Genome Biology. 8: R236. PMID 17996033 DOI: 10.1186/Gb-2007-8-11-R236 |
0.539 |
|
| 2007 |
Clark AG, Eisen MB, Smith DR, Bergman CM, Oliver B, Markow TA, Kaufman TC, Kellis M, Gelbart W, Iyer VN, Pollard DA, Sackton TB, Larracuente AM, Singh ND, ... ... Bhutkar A, et al. Evolution of genes and genomes on the Drosophila phylogeny. Nature. 450: 203-18. PMID 17994087 DOI: 10.1038/Nature06341 |
0.567 |
|
| 2007 |
Bhutkar A, Russo SM, Smith TF, Gelbart WM. Genome-scale analysis of positionally relocated genes. Genome Research. 17: 1880-7. PMID 17989252 DOI: 10.1101/Gr.7062307 |
0.556 |
|
| 2006 |
Bhutkar A, Russo S, Smith TF, Gelbart WM. Techniques for multi-genome synteny analysis to overcome assembly limitations. Genome Informatics. International Conference On Genome Informatics. 17: 152-61. PMID 17503388 DOI: 10.11234/Gi1990.17.2_152 |
0.539 |
|
| 2005 |
Favaretto P, Bhutkar A, Smith TF. Constraining ribosomal RNA conformational space. Nucleic Acids Research. 33: 5106-11. PMID 16155182 DOI: 10.1093/Nar/Gki805 |
0.6 |
|
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