Stein Aerts - Publications

Affiliations: 
Katholieke Universiteit Leuven, Leuven, Vlaanderen, Belgium 
Area:
regualtory genomics, computational biology
Website:
http://www.aertslab.org

68 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Li H, Janssens J, De Waegeneer M, Kolluru SS, Davie K, Gardeux V, Saelens W, David FPA, Brbić M, Spanier K, Leskovec J, McLaughlin CN, Xie Q, Jones RC, Brueckner K, ... ... Aerts S, et al. Fly Cell Atlas: A single-nucleus transcriptomic atlas of the adult fruit fly. Science (New York, N.Y.). 375: eabk2432. PMID 35239393 DOI: 10.1126/science.abk2432  0.595
2022 De Rop FV, Ismail JN, Bravo González-Blas C, Hulselmans GJ, Flerin CC, Janssens J, Theunis K, Christiaens VM, Wouters J, Marcassa G, de Wit J, Poovathingal S, Aerts S. Hydrop enables droplet-based single-cell ATAC-seq and single-cell RNA-seq using dissolvable hydrogel beads. Elife. 11. PMID 35195064 DOI: 10.7554/eLife.73971  0.583
2022 Janssens J, Aibar S, Taskiran II, Ismail JN, Gomez AE, Aughey G, Spanier KI, De Rop FV, González-Blas CB, Dionne M, Grimes K, Quan XJ, Papasokrati D, Hulselmans G, Makhzami S, ... ... Aerts S, et al. Decoding gene regulation in the fly brain. Nature. PMID 34987221 DOI: 10.1038/s41586-021-04262-z  0.667
2021 Atak ZK, Taskiran II, Demeulemeester J, Flerin C, Mauduit D, Minnoye L, Hulselmans G, Christiaens V, Ghanem GE, Wouters J, Aerts S. Interpretation of allele-specific chromatin accessibility using cell state-aware deep learning. Genome Research. PMID 33832990 DOI: 10.1101/gr.260851.120  0.313
2020 Ravenscroft TA, Janssens J, Lee PT, Tepe B, Marcogliese PC, Makhzami S, Holmes TC, Aerts S, Bellen HJ. voltage-gated sodium channels are only expressed in active neurons and are localized to distal axonal initial segment-like domains. The Journal of Neuroscience : the Official Journal of the Society For Neuroscience. PMID 32928889 DOI: 10.1523/Jneurosci.0142-20.2020  0.66
2020 Minnoye L, Taskiran II, Mauduit D, Fazio M, Van Aerschot L, Hulselmans G, Christiaens V, Makhzami S, Seltenhammer M, Karras P, Primot A, Cadieu E, van Rooijen E, Marine JC, Egidy G, ... ... Aerts S, et al. Cross-species analysis of enhancer logic using deep learning. Genome Research. PMID 32732264 DOI: 10.1101/Gr.260844.120  0.397
2020 Almudi I, Vizueta J, Wyatt CDR, de Mendoza A, Marlétaz F, Firbas PN, Feuda R, Masiero G, Medina P, Alcaina-Caro A, Cruz F, Gómez-Garrido J, Gut M, Alioto TS, Vargas-Chavez C, ... ... Aerts S, et al. Genomic adaptations to aquatic and aerial life in mayflies and the origin of insect wings. Nature Communications. 11: 2631. PMID 32457347 DOI: 10.1038/S41467-020-16284-8  0.38
2019 Moya IM, Castaldo SA, Van den Mooter L, Soheily S, Sansores-Garcia L, Jacobs J, Mannaerts I, Xie J, Verboven E, Hillen H, Algueró-Nadal A, Karaman R, Van Haele M, Kowalczyk W, De Waegeneer M, ... ... Aerts S, et al. Peritumoral activation of the Hippo pathway effectors YAP and TAZ suppresses liver cancer in mice. Science (New York, N.Y.). 366: 1029-1034. PMID 31754005 DOI: 10.1126/Science.Aaw9886  0.3
2019 Bonnefont J, Tiberi L, van den Ameele J, Potier D, Gaber ZB, Lin X, Bilheu A, Herpoel A, Velez Bravo FD, Guillemot F, Aerts S, Vanderhaeghen P. Cortical Neurogenesis Requires Bcl6-Mediated Transcriptional Repression of Multiple Self-Renewal-Promoting Extrinsic Pathways. Neuron. PMID 31353074 DOI: 10.1016/J.Neuron.2019.06.027  0.392
2019 Varum S, Baggiolini A, Zurkirchen L, Atak ZK, Cantù C, Marzorati E, Bossart R, Wouters J, Häusel J, Tuncer E, Zingg D, Veen D, John N, Balz M, Levesque MP, ... ... Aerts S, et al. Yin Yang 1 Orchestrates a Metabolic Program Required for Both Neural Crest Development and Melanoma Formation. Cell Stem Cell. 24: 637-653.e9. PMID 30951662 DOI: 10.1016/J.Stem.2019.03.011  0.38
2019 Bates AS, Janssens J, Jefferis GS, Aerts S. Neuronal cell types in the fly: single-cell anatomy meets single-cell genomics. Current Opinion in Neurobiology. 56: 125-134. PMID 30703584 DOI: 10.1016/J.Conb.2018.12.012  0.622
2018 Rambow F, Rogiers A, Marin-Bejar O, Aibar S, Femel J, Dewaele M, Karras P, Brown D, Chang YH, Debiec-Rychter M, Adriaens C, Radaelli E, Wolter P, Bechter O, Dummer R, ... ... Aerts S, et al. Toward Minimal Residual Disease-Directed Therapy in Melanoma. Cell. PMID 30017245 DOI: 10.1016/J.Cell.2018.06.025  0.354
2018 Lambrechts D, Wauters E, Boeckx B, Aibar S, Nittner D, Burton O, Bassez A, Decaluwé H, Pircher A, Van den Eynde K, Weynand B, Verbeken E, De Leyn P, Liston A, Vansteenkiste J, ... ... Aerts S, et al. Phenotype molding of stromal cells in the lung tumor microenvironment. Nature Medicine. PMID 29988129 DOI: 10.1038/S41591-018-0096-5  0.362
2018 Davie K, Janssens J, Koldere D, De Waegeneer M, Pech U, Kreft Ł, Aibar S, Makhzami S, Christiaens V, Bravo González-Blas C, Poovathingal S, Hulselmans G, Spanier KI, Moerman T, Vanspauwen B, ... ... Aerts S, et al. A Single-Cell Transcriptome Atlas of the Aging Drosophila Brain. Cell. PMID 29909982 DOI: 10.1016/J.Cell.2018.05.057  0.621
2018 Jacobs J, Atkins M, Davie K, Imrichova H, Romanelli L, Christiaens V, Hulselmans G, Potier D, Wouters J, Taskiran II, Paciello G, González-Blas CB, Koldere D, Aibar S, Halder G, ... Aerts S, et al. The transcription factor Grainy head primes epithelial enhancers for spatiotemporal activation by displacing nucleosomes. Nature Genetics. PMID 29867222 DOI: 10.1038/S41588-018-0140-X  0.769
2018 Bornschein S, Demeyer S, Stirparo R, Gielen O, Vicente C, Geerdens E, Ghesquière B, Aerts S, Cools J, de Bock CE. Defining the molecular basis of oncogenic cooperation between TAL1 expression and Pten deletion in T-ALL using a novel pro-T-cell model system. Leukemia. 32: 941-951. PMID 29151585 DOI: 10.1038/Leu.2017.328  0.345
2017 Aibar S, González-Blas CB, Moerman T, Huynh-Thu VA, Imrichova H, Hulselmans G, Rambow F, Marine JC, Geurts P, Aerts J, van den Oord J, Atak ZK, Wouters J, Aerts S. SCENIC: single-cell regulatory network inference and clustering. Nature Methods. PMID 28991892 DOI: 10.1038/Nmeth.4463  0.418
2017 Pascual J, Jacobs J, Sansores-Garcia L, Natarajan M, Zeitlinger J, Aerts S, Halder G, Hamaratoglu F. Hippo Reprograms the Transcriptional Response to Ras Signaling. Developmental Cell. 42: 667-680.e4. PMID 28950103 DOI: 10.1016/J.Devcel.2017.08.013  0.323
2017 Neto M, Naval-Sánchez M, Potier D, Pereira PS, Geerts D, Aerts S, Casares F. Nuclear receptors connect progenitor transcription factors to cell cycle control. Scientific Reports. 7: 4845. PMID 28687780 DOI: 10.1038/S41598-017-04936-7  0.424
2017 Olvedy M, Tisserand JC, Luciani F, Boeckx B, Wouters J, Lopez S, Rambow F, Aibar S, Thienpont B, Barra J, Köhler C, Radaelli E, Tartare-Deckert S, Aerts S, Dubreuil P, et al. Comparative oncogenomics identifies tyrosine kinase FES as a tumor suppressor in melanoma. The Journal of Clinical Investigation. PMID 28463229 DOI: 10.1172/Jci91291  0.339
2016 Atkins M, Potier D, Romanelli L, Jacobs J, Mach J, Hamaratoglu F, Aerts S, Halder G. An Ectopic Network of Transcription Factors Regulated by Hippo Signaling Drives Growth and Invasion of a Malignant Tumor Model. Current Biology : Cb. PMID 27476594 DOI: 10.1016/J.Cub.2016.06.035  0.778
2016 Brás-Pereira C, Potier D, Jacobs J, Aerts S, Casares F, Janody F. dachshund Potentiates Hedgehog Signaling during Drosophila Retinogenesis. Plos Genetics. 12: e1006204. PMID 27442438 DOI: 10.1371/Journal.Pgen.1006204  0.365
2016 Adriaens C, Standaert L, Barra J, Latil M, Verfaillie A, Kalev P, Boeckx B, Wijnhoven PW, Radaelli E, Vermi W, Leucci E, Lapouge G, Beck B, van den Oord J, Nakagawa S, ... ... Aerts S, et al. p53 induces formation of NEAT1 lncRNA-containing paraspeckles that modulate replication stress response and chemosensitivity. Nature Medicine. PMID 27376578 DOI: 10.1038/Nm.4135  0.318
2016 Jin M, Aibar S, Ge Z, Chen R, Aerts S, Mardon G. Identification of Novel Direct Targets of Drosophila Sine Oculis by Integration of Genome-wide Data Sets. Developmental Biology. PMID 27178668 DOI: 10.1016/J.Ydbio.2016.05.007  0.422
2016 Leucci E, Vendramin R, Spinazzi M, Laurette P, Fiers M, Wouters J, Radaelli E, Eyckerman S, Leonelli C, Vanderheyden K, Rogiers A, Hermans E, Baatsen P, Aerts S, Amant F, et al. Melanoma addiction to the long non-coding RNA SAMMSON. Nature. 531: 518-22. PMID 27008969 DOI: 10.1038/Nature17161  0.365
2015 Verfaillie A, Imrichova H, Atak ZK, Dewaele M, Rambow F, Hulselmans G, Christiaens V, Svetlichnyy D, Luciani F, Van den Mooter L, Claerhout S, Fiers M, Journe F, Ghanem GE, Herrmann C, ... ... Aerts S, et al. Decoding the regulatory landscape of melanoma reveals TEADS as regulators of the invasive cell state. Nature Communications. 6: 6683. PMID 25865119 DOI: 10.1038/Ncomms7683  0.417
2015 Laurette P, Strub T, Koludrovic D, Keime C, Le Gras S, Seberg H, Van Otterloo E, Imrichova H, Siddaway R, Aerts S, Cornell RA, Mengus G, Davidson I. Transcription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells. Elife. 4. PMID 25803486 DOI: 10.7554/Elife.06857  0.416
2015 Davie K, Jacobs J, Atkins M, Potier D, Christiaens V, Halder G, Aerts S. Discovery of transcription factors and regulatory regions driving in vivo tumor development by ATAC-seq and FAIRE-seq open chromatin profiling. Plos Genetics. 11: e1004994. PMID 25679813 DOI: 10.1371/Journal.Pgen.1004994  0.78
2015 Oliva C, Molina-Fernandez C, Maureira M, Candia N, López E, Hassan B, Aerts S, Cánovas J, Olguín P, Sierralta J. Hindsight regulates photoreceptor axon targeting through transcriptional control of jitterbug/Filamin and multiple genes involved in axon guidance in Drosophila. Developmental Neurobiology. PMID 25652545 DOI: 10.1002/Dneu.22271  0.629
2015 Laurette P, Strub T, Koludrovic D, Keime C, Gras SL, Seberg H, Otterloo EV, Imrichova H, Siddaway R, Aerts S, Cornell RA, Mengus G, Davidson I. Author response: Transcription factor MITF and remodeller BRG1 define chromatin organisation at regulatory elements in melanoma cells Elife. DOI: 10.7554/Elife.06857.025  0.363
2014 Potier D, Davie K, Hulselmans G, Naval Sanchez M, Haagen L, Huynh-Thu VA, Koldere D, Celik A, Geurts P, Christiaens V, Aerts S. Mapping gene regulatory networks in Drosophila eye development by large-scale transcriptome perturbations and motif inference. Cell Reports. 9: 2290-303. PMID 25533349 DOI: 10.1016/J.Celrep.2014.11.038  0.45
2014 Hattori H, Janky R, Nietfeld W, Aerts S, Madan Babu M, Venkitaraman AR. p53 shapes genome-wide and cell type-specific changes in microRNA expression during the human DNA damage response. Cell Cycle (Georgetown, Tex.). 13: 2572-86. PMID 25486198 DOI: 10.4161/15384101.2015.942209  0.328
2014 Potier D, Seyres D, Guichard C, Iche-Torres M, Aerts S, Herrmann C, Perrin L. Identification of cis-regulatory modules encoding temporal dynamics during development. Bmc Genomics. 15: 534. PMID 24972496 DOI: 10.1186/1471-2164-15-534  0.479
2014 Neville MC, Nojima T, Ashley E, Parker DJ, Walker J, Southall T, Van de Sande B, Marques AC, Fischer B, Brand AH, Russell S, Ritchie MG, Aerts S, Goodwin SF. Male-specific fruitless isoforms target neurodevelopmental genes to specify a sexually dimorphic nervous system. Current Biology : Cb. 24: 229-41. PMID 24440396 DOI: 10.1016/J.Cub.2013.11.035  0.388
2013 Atak ZK, Gianfelici V, Hulselmans G, De Keersmaecker K, Devasia AG, Geerdens E, Mentens N, Chiaretti S, Durinck K, Uyttebroeck A, Vandenberghe P, Wlodarska I, Cloos J, Foà R, Speleman F, ... ... Aerts S, et al. Comprehensive analysis of transcriptome variation uncovers known and novel driver events in T-cell acute lymphoblastic leukemia. Plos Genetics. 9: e1003997. PMID 24367274 DOI: 10.1371/Journal.Pgen.1003997  0.405
2013 Menoret D, Santolini M, Fernandes I, Spokony R, Zanet J, Gonzalez I, Latapie Y, Ferrer P, Rouault H, White KP, Besse P, Hakim V, Aerts S, Payre F, Plaza S. Genome-wide analyses of Shavenbaby target genes reveals distinct features of enhancer organization. Genome Biology. 14: R86. PMID 23972280 DOI: 10.1186/Gb-2013-14-8-R86  0.474
2013 Vanden Broeck L, Naval-Sánchez M, Adachi Y, Diaper D, Dourlen P, Chapuis J, Kleinberger G, Gistelinck M, Van Broeckhoven C, Lambert JC, Hirth F, Aerts S, Callaerts P, Dermaut B. TDP-43 loss-of-function causes neuronal loss due to defective steroid receptor-mediated gene program switching in Drosophila. Cell Reports. 3: 160-72. PMID 23333275 DOI: 10.1016/J.Celrep.2012.12.014  0.356
2013 van den Berghe V, Stappers E, Vandesande B, Dimidschstein J, Kroes R, Francis A, Conidi A, Lesage F, Dries R, Cazzola S, Berx G, Kessaris N, Vanderhaeghen P, van Ijcken W, Grosveld FG, ... ... Aerts S, et al. Directed migration of cortical interneurons depends on the cell-autonomous action of Sip1. Neuron. 77: 70-82. PMID 23312517 DOI: 10.1016/J.Neuron.2012.11.009  0.3
2013 De Keersmaecker K, Atak ZK, Li N, Vicente C, Patchett S, Girardi T, Gianfelici V, Geerdens E, Clappier E, Porcu M, Lahortiga I, Lucà R, Yan J, Hulselmans G, Vranckx H, ... ... Aerts S, et al. Exome sequencing identifies mutation in CNOT3 and ribosomal genes RPL5 and RPL10 in T-cell acute lymphoblastic leukemia. Nature Genetics. 45: 186-90. PMID 23263491 DOI: 10.1038/Ng.2508  0.58
2013 Naval-Sánchez M, Potier D, Haagen L, Sánchez M, Munck S, Van de Sande B, Casares F, Christiaens V, Aerts S. Comparative motif discovery combined with comparative transcriptomics yields accurate targetome and enhancer predictions. Genome Research. 23: 74-88. PMID 23070853 DOI: 10.1101/Gr.140426.112  0.457
2013 Gianfelici V, Chiaretti S, Atak ZK, Brugnoletti F, Monica M, Hulselmans G, Keersmaecker Kd, Geerdens E, Mancini M, Vitale A, Elia L, Matarazzo M, Rossi D, Gaidano G, Guarini A, ... Aerts S, et al. Whole Transcriptome Sequencing In Refractory T-Cell Acute Lymphoblastic Leukemia Blood. 122: 350-350. DOI: 10.1182/Blood.V122.21.350.350  0.402
2012 Youssef KK, Lapouge G, Bouvrée K, Rorive S, Brohée S, Appelstein O, Larsimont JC, Sukumaran V, Van de Sande B, Pucci D, Dekoninck S, Berthe JV, Aerts S, Salmon I, del Marmol V, et al. Adult interfollicular tumour-initiating cells are reprogrammed into an embryonic hair follicle progenitor-like fate during basal cell carcinoma initiation. Nature Cell Biology. 14: 1282-94. PMID 23178882 DOI: 10.1038/Ncb2628  0.349
2012 Spans L, Atak ZK, Van Nieuwerburgh F, Deforce D, Lerut E, Aerts S, Claessens F. Variations in the exome of the LNCaP prostate cancer cell line. The Prostate. 72: 1317-27. PMID 22213130 DOI: 10.1002/Pros.22480  0.332
2012 Potier D, Atak ZK, Sanchez MN, Herrmann C, Aerts S. Using cisTargetX to predict transcriptional targets and networks in Drosophila. Methods in Molecular Biology (Clifton, N.J.). 786: 291-314. PMID 21938634 DOI: 10.1007/978-1-61779-292-2_18  0.498
2011 Aerts S, Hassan B. Whole-genome prediction of cis-regulatory modules and target genes yields insight into gene regulatory networks underlying sensory differentiation. Fly. 5: 221-3. PMID 21471735 DOI: 10.4161/Fly.5.3.15542  0.679
2011 Aerts S, Hassan BA. Whole-genome prediction of cis-regulatory modules and target genes yields insight into gene regulatory networks underlying sensory differentiation Fly. 5: 1-3.  0.62
2010 Aerts S, Quan XJ, Claeys A, Naval Sanchez M, Tate P, Yan J, Hassan BA. Robust target gene discovery through transcriptome perturbations and genome-wide enhancer predictions in Drosophila uncovers a regulatory basis for sensory specification. Plos Biology. 8: e1000435. PMID 20668662 DOI: 10.1371/Journal.Pbio.1000435  0.677
2009 Bossuyt W, De Geest N, Aerts S, Leenaerts I, Marynen P, Hassan BA. The atonal proneural transcription factor links differentiation and tumor formation in Drosophila. Plos Biology. 7: e40. PMID 19243220 DOI: 10.1371/Journal.Pbio.1000040  0.653
2009 Aerts S, Vilain S, Hu S, Tranchevent LC, Barriot R, Yan J, Moreau Y, Hassan BA, Quan XJ. Integrating computational biology and forward genetics in Drosophila. Plos Genetics. 5: e1000351. PMID 19165344 DOI: 10.1371/Journal.Pgen.1000351  0.758
2008 Aerts S, Butland S. Sequencing the regulatory genome. Genome Biology. 9: 313. PMID 18598374 DOI: 10.1186/Gb-2008-9-6-313  0.396
2008 Tranchevent LC, Barriot R, Yu S, Van Vooren S, Van Loo P, Coessens B, De Moor B, Aerts S, Moreau Y. ENDEAVOUR update: a web resource for gene prioritization in multiple species. Nucleic Acids Research. 36: W377-84. PMID 18508807 DOI: 10.1093/Nar/Gkn325  0.406
2008 Van Loo P, Aerts S, Thienpont B, De Moor B, Moreau Y, Marynen P. ModuleMiner - improved computational detection of cis-regulatory modules: are there different modes of gene regulation in embryonic development and adult tissues? Genome Biology. 9: R66. PMID 18394174 DOI: 10.1186/Gb-2008-9-4-R66  0.412
2008 Aerts S, Haeussler M, van Vooren S, Griffith OL, Hulpiau P, Jones SJ, Montgomery SB, Bergman CM. Text-mining assisted regulatory annotation. Genome Biology. 9: R31. PMID 18271954 DOI: 10.1186/Gb-2008-9-2-R31  0.613
2008 Griffith OL, Montgomery SB, Bernier B, Chu B, Kasaian K, Aerts S, Mahony S, Sleumer MC, Bilenky M, Haeussler M, Griffith M, Gallo SM, Giardine B, Hooghe B, Van Loo P, et al. ORegAnno: an open-access community-driven resource for regulatory annotation. Nucleic Acids Research. 36: D107-13. PMID 18006570 DOI: 10.1093/Nar/Gkm967  0.617
2007 Stark A, Lin MF, Kheradpour P, Pedersen JS, Parts L, Carlson JW, Crosby MA, Rasmussen MD, Roy S, Deoras AN, Ruby JG, Brennecke J, Hodges E, ... ... Aerts S, et al. Discovery of functional elements in 12 Drosophila genomes using evolutionary signatures. Nature. 450: 219-32. PMID 17994088 DOI: 10.1038/Nature06340  0.636
2007 Aerts S, van Helden J, Sand O, Hassan BA. Fine-tuning enhancer models to predict transcriptional targets across multiple genomes. Plos One. 2: e1115. PMID 17973026 DOI: 10.1371/Journal.Pone.0001115  0.652
2006 Dabrowski M, Aerts S, Kaminska B. Prediction of a key role of motifs binding E2F and NR2F in down-regulation of numerous genes during the development of the mouse hippocampus. Bmc Bioinformatics. 7: 367. PMID 16884529 DOI: 10.1186/1471-2105-7-367  0.442
2006 Aerts S, Lambrechts D, Maity S, Van Loo P, Coessens B, De Smet F, Tranchevent LC, De Moor B, Marynen P, Hassan B, Carmeliet P, Moreau Y. Gene prioritization through genomic data fusion. Nature Biotechnology. 24: 537-44. PMID 16680138 DOI: 10.1038/Nbt1203  0.641
2006 Dabrowski M, Adach A, Aerts S, Moreau Y, Kaminska B. Identification of conserved modes of expression profiles during hippocampal development and neuronal differentiation in vitro. Journal of Neurochemistry. 97: 87-91. PMID 16635255 DOI: 10.1111/J.1471-4159.2005.03537.X  0.339
2006 Aerts S, Lambrechts D, Maity S, Loo PV, Coessens B, Smet FD, Tranchevent L, Moor BD, Marynen P, Hassan B, Carmeliet P, Moreau Y. Erratum: Gene prioritization through genomic data fusion Nature Biotechnology. 24: 719-719. DOI: 10.1038/Nbt0606-719D  0.57
2005 Aerts S, Van Loo P, Thijs G, Mayer H, de Martin R, Moreau Y, De Moor B. TOUCAN 2: the all-inclusive open source workbench for regulatory sequence analysis. Nucleic Acids Research. 33: W393-6. PMID 15980497 DOI: 10.1093/Nar/Gki354  0.399
2004 Aerts S, Thijs G, Dabrowski M, Moreau Y, De Moor B. Comprehensive analysis of the base composition around the transcription start site in Metazoa. Bmc Genomics. 5: 34. PMID 15171795 DOI: 10.1186/1471-2164-5-34  0.408
2004 Aerts S, Van Loo P, Moreau Y, De Moor B. A genetic algorithm for the detection of new cis-regulatory modules in sets of coregulated genes. Bioinformatics (Oxford, England). 20: 1974-6. PMID 15044242 DOI: 10.1093/Bioinformatics/Bth179  0.32
2004 Denys H, Jadidizadeh A, Amini Nik S, Van Dam K, Aerts S, Alman BA, Cassiman JJ, Tejpar S. Identification of IGFBP-6 as a significantly downregulated gene by beta-catenin in desmoid tumors. Oncogene. 23: 654-64. PMID 14737101 DOI: 10.1038/Sj.Onc.1207160  0.369
2003 Moreau Y, Aerts S, De Moor B, De Strooper B, Dabrowski M. Comparison and meta-analysis of microarray data: from the bench to the computer desk. Trends in Genetics : Tig. 19: 570-7. PMID 14550631 DOI: 10.1016/J.Tig.2003.08.006  0.319
2003 Aerts S, Van Loo P, Thijs G, Moreau Y, De Moor B. Computational detection of cis -regulatory modules. Bioinformatics (Oxford, England). 19: ii5-14. PMID 14534164 DOI: 10.1093/bioinformatics/btg1052  0.373
2003 Dabrowski M, Aerts S, Van Hummelen P, Craessaerts K, De Moor B, Annaert W, Moreau Y, De Strooper B. Gene profiling of hippocampal neuronal culture. Journal of Neurochemistry. 85: 1279-88. PMID 12753086 DOI: 10.1046/J.1471-4159.2003.01753.X  0.419
2003 Aerts S, Thijs G, Coessens B, Staes M, Moreau Y, De Moor B. Toucan: deciphering the cis-regulatory logic of coregulated genes. Nucleic Acids Research. 31: 1753-64. PMID 12626717 DOI: 10.1093/Nar/Gkg268  0.434
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