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Timothy P. Devarenne, Ph.D. - Publications

Affiliations: 
2000 University of Kentucky, Lexington, KY 
Area:
Plant Physiology, Molecular Biology
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35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Hsu S, Browne DR, Tatli M, Devarenne TP, Stern DB. N-terminal sequences affect expression of triterpene biosynthesis enzymes in Chlamydomonas chloroplasts Algal Research. 44: 101662. DOI: 10.1016/J.Algal.2019.101662  0.386
2018 Tatli M, Ishihara M, Heiss C, Browne DR, Dangott LJ, Vitha S, Azadi P, Devarenne TP. Polysaccharide associated protein (PSAP) from the green microalga Botryococcus braunii is a unique extracellular matrix hydroxyproline-rich glycoprotein Algal Research. 29: 92-103. DOI: 10.1016/J.Algal.2017.11.018  0.311
2017 Thapa HR, Tang S, Sacchettini JC, Devarenne TP. Tetraterpene synthase substrate and product specificity in the green microalga Botryococcus braunii race L. Acs Chemical Biology. PMID 28813599 DOI: 10.1021/Acschembio.7B00457  0.432
2017 Browne DR, Jenkins J, Schmutz J, Shu S, Barry K, Grimwood J, Chiniquy J, Sharma A, Niehaus TD, Weiss TL, Koppisch AT, Fox DT, Dhungana S, Okada S, Chappell J, ... Devarenne TP, et al. Draft Nuclear Genome Sequence of the Liquid Hydrocarbon-Accumulating Green Microalga Botryococcus braunii Race B (Showa). Genome Announcements. 5. PMID 28428306 DOI: 10.1128/Genomea.00215-17  0.686
2017 Tatli M, Naik MT, Okada S, Dangott LJ, Devarenne TP. Isolation and Characterization of Cyclic C33 Botryococcenes and a Trimethylsqualene Isomer from Botryococcus braunii Race B. Journal of Natural Products. PMID 28333447 DOI: 10.1021/Acs.Jnatprod.6B00934  0.336
2017 Tatli M, Chun HJ, Camp CH, Li J, Cicerone MT, Shih W, Laane J, Devarenne TP. Raman spectra and DFT calculations for botryococcene and methylsqualene hydrocarbons from the B race of the green microalga Botryococcus braunii Journal of Molecular Structure. 1147: 427-437. DOI: 10.1016/J.Molstruc.2017.06.126  0.329
2017 Chun HJ, Waqued S, Thapa HR, Han A, Yakovlev VV, Laane J, Devarenne TP. Raman spectra and DFT calculations for tetraterpene hydrocarbons from the L race of the green microalga Botryococcus braunii Journal of Molecular Structure. 1129: 216-221. DOI: 10.1016/J.Molstruc.2016.09.081  0.309
2017 Unkefer CJ, Sayre RT, Magnuson JK, Anderson DB, Baxter I, Blaby IK, Brown JK, Carleton M, Cattolico RA, Dale T, Devarenne TP, Downes CM, Dutcher SK, Fox DT, Goodenough U, et al. Review of the algal biology program within the National Alliance for Advanced Biofuels and Bioproducts Algal Research. 22: 187-215. DOI: 10.1016/J.Algal.2016.06.002  0.354
2016 Cornejo-Corona I, Thapa HR, Browne DR, Devarenne TP, Lozoya-Gloria E. Stress responses of the oil-producing green microalga Botryococcus braunii Race B. Peerj. 4: e2748. PMID 27957393 DOI: 10.7717/Peerj.2748  0.393
2016 Thapa HR, Naik MT, Okada S, Takada K, Molnár I, Xu Y, Devarenne TP. A squalene synthase-like enzyme initiates production of tetraterpenoid hydrocarbons in Botryococcus braunii Race L. Nature Communications. 7: 11198. PMID 27050299 DOI: 10.1038/Ncomms11198  0.429
2016 Miao M, Niu X, Kud J, Du X, Avila J, Devarenne TP, Kuhl JC, Liu Y, Xiao F. The ubiquitin ligase SEVEN IN ABSENTIA (SINA) ubiquitinates a defense-related NAC transcription factor and is involved in defense signaling. The New Phytologist. PMID 26879496 DOI: 10.1111/Nph.13890  0.305
2016 Kim HS, Guzman AR, Thapa HR, Devarenne TP, Han A. A droplet microfluidics platform for rapid microalgal growth and oil production analysis. Biotechnology and Bioengineering. PMID 26724784 DOI: 10.1002/Bit.25930  0.314
2014 Kim HS, Weiss TL, Thapa HR, Devarenne TP, Han A. A microfluidic photobioreactor array demonstrating high-throughput screening for microalgal oil production. Lab On a Chip. 14: 1415-25. PMID 24496295 DOI: 10.1039/C3Lc51396C  0.313
2013 Avila J, Devarenne TP. Ubiquitination of the tomato cell death suppressor Adi3 by the RING E3 ubiquitin ligase AdBiL. Biochemical and Biophysical Research Communications. 430: 119-24. PMID 23178567 DOI: 10.1016/J.Bbrc.2012.11.043  0.313
2012 Molnár I, Lopez D, Wisecaver JH, Devarenne TP, Weiss TL, Pellegrini M, Hackett JD. Bio-crude transcriptomics: gene discovery and metabolic network reconstruction for the biosynthesis of the terpenome of the hydrocarbon oil-producing green alga, Botryococcus braunii race B (Showa). Bmc Genomics. 13: 576. PMID 23110428 DOI: 10.1186/1471-2164-13-576  0.438
2012 Weiss TL, Roth R, Goodson C, Vitha S, Black I, Azadi P, Rusch J, Holzenburg A, Devarenne TP, Goodenough U. Colony organization in the green alga Botryococcus braunii (Race B) is specified by a complex extracellular matrix. Eukaryotic Cell. 11: 1424-40. PMID 22941913 DOI: 10.1128/Ec.00184-12  0.318
2012 Dittrich AC, Devarenne TP. Perspectives in PDK1 evolution: insights from photosynthetic and non-photosynthetic organisms. Plant Signaling & Behavior. 7: 642-9. PMID 22580698 DOI: 10.4161/Psb.20038  0.302
2012 Avila J, Gregory OG, Su D, Deeter TA, Chen S, Silva-Sanchez C, Xu S, Martin GB, Devarenne TP. The β-subunit of the SnRK1 complex is phosphorylated by the plant cell death suppressor Adi3. Plant Physiology. 159: 1277-90. PMID 22573803 DOI: 10.1104/Pp.112.198432  0.319
2012 Niehaus TD, Kinison S, Okada S, Yeo YS, Bell SA, Cui P, Devarenne TP, Chappell J. Functional identification of triterpene methyltransferases from Botryococcus braunii race B. The Journal of Biological Chemistry. 287: 8163-73. PMID 22241476 DOI: 10.1074/Jbc.M111.316059  0.711
2012 Dittrich AC, Devarenne TP. Characterization of a PDK1 homologue from the moss Physcomitrella patens. Plant Physiology. 158: 1018-33. PMID 22158524 DOI: 10.1104/Pp.111.184572  0.332
2012 Dittrich AC, Devarenne TP. An ATP analog-sensitive version of the tomato cell death suppressor protein kinase Adi3 for use in substrate identification. Biochimica Et Biophysica Acta. 1824: 269-73. PMID 22027266 DOI: 10.1016/J.Bbapap.2011.10.004  0.312
2011 Devarenne TP. The plant cell death suppressor Adi3 interacts with the autophagic protein Atg8h. Biochemical and Biophysical Research Communications. 412: 699-703. PMID 21867679 DOI: 10.1016/J.Bbrc.2011.08.031  0.33
2011 Niehaus TD, Okada S, Devarenne TP, Watt DS, Sviripa V, Chappell J. Identification of unique mechanisms for triterpene biosynthesis in Botryococcus braunii. Proceedings of the National Academy of Sciences of the United States of America. 108: 12260-5. PMID 21746901 DOI: 10.1073/Pnas.1106222108  0.717
2011 Weiss TL, Johnston JS, Fujisawa K, Okada S, Devarenne TP. Genome size and phylogenetic analysis of the A and L races of Botryococcus braunii Journal of Applied Phycology. 23: 833-839. DOI: 10.1007/S10811-010-9586-7  0.378
2010 Weiss TL, Spencer Johnston J, Fujisawa K, Sumimoto K, Okada S, Chappell J, Devarenne TP. Phylogenetic placement, genome size, and gc content of the liquid-hydrocarbon-producing green microalga botryococcus braunii strain berkeley (showa) (chlorophyta) Journal of Phycology. 46: 534-540. DOI: 10.1111/J.1529-8817.2010.00820.X  0.555
2007 Devarenne TP, Martin GB. Manipulation of plant programmed cell death pathways during plant-pathogen interactions. Plant Signaling & Behavior. 2: 188-9. PMID 19704693 DOI: 10.4161/Psb.2.3.4150  0.316
2006 Devarenne TP, Ekengren SK, Pedley KF, Martin GB. Adi3 is a Pdk1-interacting AGC kinase that negatively regulates plant cell death. The Embo Journal. 25: 255-65. PMID 16362044 DOI: 10.1038/Sj.Emboj.7600910  0.313
2004 Okada S, Devarenne TP, Murakami M, Abe H, Chappell J. Characterization of botryococcene synthase enzyme activity, a squalene synthase-like activity from the green microalga Botryococcus braunii, Race B. Archives of Biochemistry and Biophysics. 422: 110-8. PMID 14725863 DOI: 10.1016/J.Abb.2003.12.004  0.576
2002 Devarenne TP, Ghosh A, Chappell J. Regulation of squalene synthase, a key enzyme of sterol biosynthesis, in tobacco. Plant Physiology. 129: 1095-106. PMID 12114564 DOI: 10.1104/Pp.001438  0.594
2000 Okada S, Devarenne TP, Chappell J. Molecular characterization of squalene synthase from the green microalga Botryococcus braunii, race B. Archives of Biochemistry and Biophysics. 373: 307-17. PMID 10620354 DOI: 10.1006/Abbi.1999.1568  0.627
1999 Thai L, Rush JS, Maul JE, Devarenne T, Rodgers DL, Chappell J, Waechter CJ. Farnesol is utilized for isoprenoid biosynthesis in plant cells via farnesyl pyrophosphate formed by successive monophosphorylation reactions. Proceedings of the National Academy of Sciences of the United States of America. 96: 13080-5. PMID 10557276 DOI: 10.1073/Pnas.96.23.13080  0.466
1998 Devarenne TP, Shin DH, Back K, Yin S, Chappell J. Molecular characterization of tobacco squalene synthase and regulation in response to fungal elicitor. Archives of Biochemistry and Biophysics. 349: 205-15. PMID 9448707 DOI: 10.1006/Abbi.1997.0463  0.602
1998 Godoy-Hernández GC, Chappell J, Devarenne TP, García-Pineda E, Guevara-García AA, Lozoya-Gloria E. Antisense expression of hmg1 from Arabidopsis thaliana encoding 3-hydroxy-3-methylglutaryl coenzyme A reductase, reduces isoprenoid production in transgenic tobacco plants Journal of Plant Physiology. 153: 415-424. DOI: 10.1016/S0176-1617(98)80169-7  0.575
1997 Dean JV, Devarenne TP. Peroxidase-mediated conjugation of glutathione to unsaturated phenylpropanoids. Evidence against glutathione S-transferase involvement Physiologia Plantarum. 99: 271-278. DOI: 10.1111/J.1399-3054.1997.Tb05412.X  0.349
1995 Dean JV, Devarenne TP, Lee IS, Orlofsky LE. Properties of a maize glutathione S-transferase that conjugates coumaric acid and other phenylpropanoids Plant Physiology. 108: 985-994. DOI: 10.1104/Pp.108.3.985  0.348
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