☰

Patrick J. Macdonald, Ph.D. - Publications

Affiliations: 
2012 Biomedical Engineering University of Minnesota, Twin Cities, Minneapolis, MN 
Area:
General Biophysics, Biochemistry
Tree Info Similar researchers PubMed Report error

35 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Tikhomirova A, Swift KM, Haack RA, Macdonald PJ, Hershberger SJ, Tetin SY. Acridone and Acridinium Constructs with Red-Shifted Emission. Methods and Applications in Fluorescence. PMID 33721848 DOI: 10.1088/2050-6120/abeed8  0.319
2020 Stepanyants N, Macdonald PJ, Madan Mohan P, Ramachandran R. A Single Common Protocol for the Expression and Purification of Soluble Mammalian DSPs from Escherichia coli. Methods in Molecular Biology (Clifton, N.J.). 2159: 31-40. PMID 32529361 DOI: 10.1007/978-1-0716-0676-6_3  0.353
2020 Haack RA, Macdonald PJ, Ruan Q, Hershberger SJ, Himmelsbach RJ, Tetin SY. Preparation of traceable heterobifunctional cross-linking probes from an unsymmetrical bifunctional rhodamine Tetrahedron Letters. 61: 152236. DOI: 10.1016/J.Tetlet.2020.152236  0.426
2018 Macdonald PJ, Ruan Q, Tetin SY. Direct single-molecule counting for immunoassay applications. Analytical Biochemistry. 566: 139-145. PMID 30496720 DOI: 10.1016/J.Ab.2018.11.019  0.337
2018 Lu B, Kennedy B, Clinton RW, Wang EJ, McHugh D, Stepanyants N, Macdonald PJ, Mears JA, Qi X, Ramachandran R. Steric interference from intrinsically disordered regions controls dynamin-related protein 1 self-assembly during mitochondrial fission. Scientific Reports. 8: 10879. PMID 30022112 DOI: 10.1038/S41598-018-29001-9  0.363
2018 Macdonald PJ, Gayda S, Haack RA, Ruan Q, Himmelsbach RJ, Tetin SY. Rhodamine-derived fluorescent dye with inherent blinking behavior for super-resolution imaging. Analytical Chemistry. PMID 29938506 DOI: 10.1021/Acs.Analchem.8B01645  0.44
2018 Macdonald PJ, Haack RA, Gayda S, Tetin SY. Spontaneously Blinking Dyes for Localization Microscopy: Simplified Synthesis and Single-Molecule Characterization Biophysical Journal. 114. DOI: 10.1016/J.Bpj.2017.11.933  0.33
2018 Macdonald P, Stepanyants N, Singh A, Clinton R, Osellame L, Ryan M, Ramachandran R. MiD51 and Mff Co-assemble in Cardiolipin-Enriched Membrane Microdomains to Cooperatively Regulate Drp1-Mediated Mitochondrial Fission Biophysical Journal. 114: 603a. DOI: 10.1016/J.Bpj.2017.11.3300  0.358
2017 Macdonald PJ, Ruan Q, Swift KM, Tetin SY. Single-Molecule Counting Applied to Immunoassays Biophysical Journal. 112: 150a. DOI: 10.1016/J.Bpj.2016.11.824  0.324
2017 Ruan Q, Haack RA, Lin Z, Macdonald PJ, Swift KM, Tetin SY. Imaging Single Molecules vs. Single-Molecule Imaging: Counting Single Molecules using Dextran-Streptavidin-Antibody Clusters (DSA) Biophysical Journal. 112: 295a. DOI: 10.1016/J.Bpj.2016.11.1599  0.367
2016 Adachi Y, Itoh K, Yamada T, Cerveny KL, Suzuki TL, Macdonald P, Frohman MA, Ramachandran R, Iijima M, Sesaki H. Coincident Phosphatidic Acid Interaction Restrains Drp1 in Mitochondrial Division. Molecular Cell. 63: 1034-43. PMID 27635761 DOI: 10.1016/J.Molcel.2016.08.013  0.345
2016 Haack RA, Macdonald PJ, Ruan Q, Himmelsbach RJ, Tetin SY. Bifunctional Rhodamine Linker Simplifies Colocalization Studies in Single-Molecule Imaging Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.3425  0.436
2016 Macdonald PJ, Ruan Q, Haack RA, Tetin SY. Determination of Antibody Binding Affinity using Single-Molecule Counting and Flow Biophysical Journal. 110. DOI: 10.1016/J.Bpj.2015.11.2629  0.356
2015 Macdonald PJ, Francy CA, Stepanyants N, Lehman L, Baglio A, Mears JA, Qi X, Ramachandran R. Distinct Splice Variants of Dynamin-related Protein 1 Differentially Utilize Mitochondrial Fission Factor as an Effector of Cooperative GTPase Activity. The Journal of Biological Chemistry. PMID 26578513 DOI: 10.1074/Jbc.M115.680181  0.381
2015 Stepanyants N, Macdonald PJ, Francy CA, Mears JA, Qi X, Ramachandran R. Cardiolipin's propensity for phase transition and its reorganization by dynamin-related protein 1 form a basis for mitochondrial membrane fission. Molecular Biology of the Cell. PMID 26157169 DOI: 10.1091/Mbc.E15-06-0330  0.44
2015 Stepanyants N, Macdonald P, Ramachandran R. Cardiolipin Reorganization and Phase Transition Induced by Dynamin-Related Protein 1 Facilitates Mitochondrial Membrane Fission Biophysical Journal. 108. DOI: 10.1016/J.Bpj.2014.11.3304  0.427
2014 Smith EM, Macdonald PJ, Chen Y, Mueller JD. Quantifying protein-protein interactions of peripheral membrane proteins by fluorescence brightness analysis. Biophysical Journal. 107: 66-75. PMID 24988342 DOI: 10.1016/J.Bpj.2014.04.055  0.711
2014 Hur KH, Macdonald PJ, Berk S, Angert CI, Chen Y, Mueller JD. Quantitative measurement of brightness from living cells in the presence of photodepletion. Plos One. 9: e97440. PMID 24820174 DOI: 10.1371/Journal.Pone.0097440  0.704
2014 Macdonald PJ, Stepanyants N, Mehrotra N, Mears JA, Qi X, Sesaki H, Ramachandran R. A dimeric equilibrium intermediate nucleates Drp1 reassembly on mitochondrial membranes for fission. Molecular Biology of the Cell. 25: 1905-15. PMID 24790094 DOI: 10.1091/Mbc.E14-02-0728  0.382
2014 Li J, Chen Y, Li M, Carpenter MA, McDougle RM, Luengas EM, Macdonald PJ, Harris RS, Mueller JD. APOBEC3 multimerization correlates with HIV-1 packaging and restriction activity in living cells. Journal of Molecular Biology. 426: 1296-307. PMID 24361275 DOI: 10.1016/J.Jmb.2013.12.014  0.593
2014 Macdonald PJ, Johnson J, Chen Y, Mueller JD. Brightness experiments. Methods in Molecular Biology (Clifton, N.J.). 1076: 699-718. PMID 24108651 DOI: 10.1007/978-1-62703-649-8_32  0.639
2013 Macdonald P, Johnson J, Smith E, Chen Y, Mueller JD. Brightness analysis. Methods in Enzymology. 518: 71-98. PMID 23276536 DOI: 10.1016/B978-0-12-388422-0.00004-2  0.624
2012 Macdonald PJ, Chen Y, Mueller JD. Chromophore maturation and fluorescence fluctuation spectroscopy of fluorescent proteins in a cell-free expression system. Analytical Biochemistry. 421: 291-8. PMID 22093611 DOI: 10.1016/J.Ab.2011.10.040  0.71
2012 Macdonald PJ, Chen Y, Li M, Harris RS, Mueller JD. Fluorescence Fluctuation Spectroscopy Applied to Cell-Free Expression, Chromophore Maturation and Protein-DNA Interaction Biophysical Journal. 102: 208a. DOI: 10.1016/J.Bpj.2011.11.1134  0.672
2012 Fogarty K, Chen Y, Grigsby I, MacDonald P, Smith E, Johnson J, Rawson J, Mansky L, Mueller J. Exploring the HTLV-1 Gag Membrane-Trafficking Pathway with Fluorescence Fluctuation Spectroscopy and Total Internal Reflection Fluorescence Microscopy Biophysical Journal. 102: 207a-208a. DOI: 10.1016/J.Bpj.2011.11.1133  0.791
2011 Fogarty KH, Chen Y, Grigsby IF, Macdonald PJ, Smith EM, Johnson JL, Rawson JM, Mansky LM, Mueller JD. Characterization of cytoplasmic Gag-gag interactions by dual-color z-scan fluorescence fluctuation spectroscopy. Biophysical Journal. 100: 1587-95. PMID 21402042 DOI: 10.1016/J.Bpj.2011.02.008  0.79
2011 Fogarty KH, Chen Y, Grigsby IF, Macdonald PJ, Smith EM, Johnson JL, Rawson JM, Mueller JD, Mansky LM. Analysis of the HTLV-1 Gag assembly pathway by biophysical fluorescence Retrovirology. 8: A206. DOI: 10.1186/1742-4690-8-S1-A206  0.785
2011 Smith EM, Macdonald PJ, Chen Y, Albanesi JP, Mueller JD. Characterization of Cytoplasmic / Membrane-Bound Protein Mixtures by Z-Scan Fluorescence Fluctuation Spectroscopy Biophysical Journal. 100: 470a. DOI: 10.1016/J.Bpj.2010.12.2755  0.72
2011 Fogarty K, Johnson J, Grigsby I, MacDonald P, Chen Y, Rawson J, Mansky L, Mueller J. Brightness Analysis of Cytoplasmic HTLV-1 and HIV-1 Gag in the Presence of Membrane-Bound Gag Complexes by Dual-Color Z-Scan Fluorescence Fluctuation Spectroscopy Biophysical Journal. 100: 468a. DOI: 10.1016/J.Bpj.2010.12.2747  0.791
2011 Macdonald PJ, Smith EM, Chen Y, Mueller JD. Brightness Characterization of Cellular and In Vitro Expressed Proteins Biophysical Journal. 100: 468a. DOI: 10.1016/J.Bpj.2010.12.2745  0.693
2010 Macdonald PJ, Chen Y, Wang X, Chen Y, Mueller JD. Brightness analysis by Z-scan fluorescence fluctuation spectroscopy for the study of protein interactions within living cells. Biophysical Journal. 99: 979-88. PMID 20682277 DOI: 10.1016/J.Bpj.2010.05.017  0.686
2010 Chen Y, Johnson J, Macdonald P, Wu B, Mueller JD. Observing protein interactions and their stoichiometry in living cells by brightness analysis of fluorescence fluctuation experiments. Methods in Enzymology. 472: 345-63. PMID 20580971 DOI: 10.1016/S0076-6879(10)72026-7  0.717
2010 Macdonald PJ, Chen Y, Li J, Mueller JD. Oligomerization and Nucleocytoplasmic Transport of NTF2 Revealed by Brightness Analysis and Two-Photon Photoactivation Biophysical Journal. 98: 307a. DOI: 10.1016/J.Bpj.2009.12.1671  0.608
2009 Macdonald PJ, Johnson J, Chen Y, Wu B, Mueller J. Brightness Analysis of Nuclear Receptor Interactions in a Cell-Free Expression System Biophysical Journal. 96: 44a. DOI: 10.1016/J.Bpj.2008.12.122  0.674
2006 Chen Y, MacDonald PJ, Skinner JP, Patterson GH, Müller JD. Probing nucleocytoplasmic transport by two-photon activation of PA-GFP. Microscopy Research and Technique. 69: 220-6. PMID 16538629 DOI: 10.1002/Jemt.20252  0.443
Show low-probability matches.