Brendan J. Epstein - Publications

Affiliations: 
Plant Biology University of Minnesota, Twin Cities, Minneapolis, MN 

30 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Beer MA, Trumbo DR, Rautsaw RM, Kozakiewicz CP, Epstein B, Hohenlohe PA, Alford RA, Schwarzkopf L, Storfer A. Spatial variation in genomic signatures of local adaptation during the cane toad invasion of Australia. Molecular Ecology. e17464. PMID 38994885 DOI: 10.1111/mec.17464  0.395
2024 Bhat A, Sharma R, Desigan K, Lucas MM, Mishra A, Bowers RM, Woyke T, Epstein B, Tiffin P, Pueyo JJ, Paape T. Horizontal gene transfer of the Mer operon is associated with large effects on the transcriptome and increased tolerance to mercury in nitrogen-fixing bacteria. Bmc Microbiology. 24: 247. PMID 38971740 DOI: 10.1186/s12866-024-03391-5  0.583
2022 Riley AB, Grillo MA, Epstein B, Tiffin P, Heath KD. Discordant population structure among rhizobium divided genomes and their legume hosts. Molecular Ecology. PMID 36161739 DOI: 10.1111/mec.16704  0.737
2022 Burghardt LT, Epstein B, Hoge M, Trujillo DI, Tiffin P. Host-Associated Rhizobial Fitness: Dependence on Nitrogen, Density, Community Complexity, and Legume Genotype. Applied and Environmental Microbiology. 88: e0052622. PMID 35852362 DOI: 10.1128/aem.00526-22  0.602
2022 Epstein B, Burghardt LT, Heath KD, Grillo MA, Kostanecki A, Hämälä T, Young ND, Tiffin P. Combining GWAS and population genomic analyses to characterize coevolution in a legume-rhizobia symbiosis. Molecular Ecology. PMID 35793264 DOI: 10.1111/mec.16602  0.765
2021 Stahlke AR, Epstein B, Barbosa S, Margres MJ, Patton AH, Hendricks SA, Veillet A, Fraik AK, Schönfeld B, McCallum HI, Hamede R, Jones ME, Storfer A, Hohenlohe PA. Contemporary and historical selection in Tasmanian devils () support novel, polygenic response to transmissible cancer. Proceedings. Biological Sciences. 288: 20210577. PMID 34034517 DOI: 10.1098/rspb.2021.0577  0.413
2021 Andrews KR, Epstein B, Leslie MS, Fiedler P, Morin PA, Hoelzel AR. Genomic signatures of divergent selection are associated with social behavior for spinner dolphin ecotypes. Molecular Ecology. PMID 33645853 DOI: 10.1111/mec.15865  0.398
2021 Epstein B, Tiffin P. Comparative genomics reveals high rates of horizontal transfer and strong purifying selection on rhizobial symbiosis genes. Proceedings. Biological Sciences. 288: 20201804. PMID 33402066 DOI: 10.1098/rspb.2020.1804  0.649
2021 Shamseldin A, Epstein B, Sadowsky MJ, Zhang Q. Comparative genomic analysis of diverse rhizobia and effective nitrogen-fixing clover-nodulating Rhizobium strains adapted to Egyptian dry ecosystems Symbiosis. 84: 39-47. DOI: 10.1007/S13199-021-00764-6  0.371
2020 Fu Z, Meier AR, Epstein B, Bergland AO, Castillo Carrillo CI, Cooper WR, Cruzado RK, Horton DR, Jensen AS, Kelley JL, Rashed A, Reitz SR, Rondon SI, Thinakaran J, Wenninger EJ, et al. Host plants and shape the population genetics of sympatric herbivore populations. Evolutionary Applications. 13: 2740-2753. PMID 33294020 DOI: 10.1111/Eva.13079  0.481
2020 Fraik AK, Margres MJ, Epstein B, Barbosa S, Jones M, Hendricks S, Schönfeld B, Stahlke AR, Veillet A, Hamede R, McCallum H, Lopez-Contreras E, Kallinen SJ, Hohenlohe PA, Kelley JL, et al. Disease swamps molecular signatures of genetic-environmental associations to abiotic factors in Tasmanian devil (Sarcophilus harrisii) populations. Evolution; International Journal of Organic Evolution. PMID 32445281 DOI: 10.1111/Evo.14023  0.462
2020 Patton AH, Margres MJ, Epstein B, Eastman J, Harmon LJ, Storfer A. Hybridizing salamanders experience accelerated diversification. Scientific Reports. 10: 6566. PMID 32300150 DOI: 10.1038/S41598-020-63378-W  0.304
2019 Burghardt LT, Trujillo DI, Epstein B, Tiffin P, Young ND. A 'Select and Resequence' approach reveals strain-specific effects of Medicago nodule-specific PLAT-domain genes. Plant Physiology. PMID 31653715 DOI: 10.1104/Pp.19.00831  0.659
2019 Burghardt LT, Epstein B, Tiffin P. Legacy of prior host and soil selection on rhizobial fitness in planta. Evolution; International Journal of Organic Evolution. PMID 31334838 DOI: 10.1111/Evo.13807  0.614
2018 Epstein B, Abou-Shanab RAI, Shamseldin A, Taylor MR, Guhlin J, Burghardt LT, Nelson M, Sadowsky MJ, Tiffin P. Genome-Wide Association Analyses in the Model Rhizobium . Msphere. 3. PMID 30355664 DOI: 10.1128/mSphere.00386-18  0.678
2018 Margres MJ, Jones M, Epstein B, Kerlin DH, Comte S, Fox S, Fraik AK, Hendricks SA, Huxtable S, Lachish S, Lazenby B, O'Rourke SM, Stahlke AR, Wiench CG, Hamede R, et al. Large-effect loci affect survival in Tasmanian devils (Sarcophilus harrisii) infected with a transmissible cancer. Molecular Ecology. PMID 30171778 DOI: 10.1111/Mec.14853  0.439
2018 Nelson M, Guhlin J, Epstein B, Tiffin P, Sadowsky MJ. The complete replicons of 16 Ensifer meliloti strains offer insights into intra- and inter-replicon gene transfer, transposon-associated loci, and repeat elements. Microbial Genomics. PMID 29671722 DOI: 10.1099/mgen.0.000174  0.654
2018 Burghardt LT, Epstein B, Guhlin J, Nelson MS, Taylor MR, Young ND, Sadowsky MJ, Tiffin P. Select and resequence reveals relative fitness of bacteria in symbiotic and free-living environments. Proceedings of the National Academy of Sciences of the United States of America. PMID 29453274 DOI: 10.1073/Pnas.1714246115  0.685
2017 Hendricks S, Epstein B, Schönfeld B, Wiench C, Hamede R, Jones M, Storfer A, Hohenlohe P. Conservation implications of limited genetic diversity and population structure in Tasmanian devils (Sarcophilus harrisii). Conservation Genetics (Print). 18: 977-982. PMID 28966567 DOI: 10.1007/S10592-017-0939-5  0.453
2017 Fu Z, Epstein B, Kelley JL, Zheng Q, Bergland AO, Castillo Carrillo CI, Jensen AS, Dahan J, Karasev AV, Snyder WE. Using NextRAD sequencing to infer movement of herbivores among host plants. Plos One. 12: e0177742. PMID 28505182 DOI: 10.1371/Journal.Pone.0177742  0.459
2017 Storfer A, Epstein B, Jones M, Micheletti S, Spear SF, Lachish S, Fox S. Landscape genetics of the Tasmanian devil: implications for spread of an infectious cancer Conservation Genetics. 18: 1287-1297. DOI: 10.1007/S10592-017-0980-4  0.423
2016 Epstein B, Jones M, Hamede R, Hendricks S, McCallum H, Murchison EP, Schönfeld B, Wiench C, Hohenlohe P, Storfer A. Rapid evolutionary response to a transmissible cancer in Tasmanian devils. Nature Communications. 7: 12684. PMID 27575253 DOI: 10.1038/Ncomms12684  0.398
2016 Trumbo DR, Epstein B, Hohenlohe PA, Alford RA, Schwarzkopf L, Storfer A. Mixed population genomics support for the central marginal hypothesis across the invasive range of the cane toad (Rhinella marina) in Australia. Molecular Ecology. PMID 27393238 DOI: 10.1111/Mec.13754  0.439
2015 Epstein B, Storfer A. Comparative Genomics of an Emerging Amphibian Virus. G3 (Bethesda, Md.). PMID 26530419 DOI: 10.1534/G3.115.023762  0.474
2015 Epstein B, Sadowsky MJ, Tiffin P. Selection on horizontally transferred and duplicated genes in sinorhizobium (ensifer), the root-nodule symbionts of medicago. Genome Biology and Evolution. 7: 1329-30. PMID 25991814 DOI: 10.1093/Gbe/Evu246  0.608
2014 Epstein B, Sadowsky MJ, Tiffin P. Selection on horizontally transferred and duplicated genes in sinorhizobium (ensifer), the root-nodule symbionts of medicago. Genome Biology and Evolution. 6: 1199-209. PMID 24803571 DOI: 10.1093/Gbe/Evu090  0.688
2013 Stanton-Geddes J, Paape T, Epstein B, Briskine R, Yoder J, Mudge J, Bharti AK, Farmer AD, Zhou P, Denny R, May GD, Erlandson S, Yakub M, Sugawara M, Sadowsky MJ, et al. Candidate genes and genetic architecture of symbiotic and agronomic traits revealed by whole-genome, sequence-based association genetics in Medicago truncatula. Plos One. 8: e65688. PMID 23741505 DOI: 10.1371/Journal.Pone.0065688  0.624
2013 Sugawara M, Epstein B, Badgley BD, Unno T, Xu L, Reese J, Gyaneshwar P, Denny R, Mudge J, Bharti AK, Farmer AD, May GD, Woodward JE, Médigue C, Vallenet D, et al. Comparative genomics of the core and accessory genomes of 48 Sinorhizobium strains comprising five genospecies. Genome Biology. 14: R17. PMID 23425606 DOI: 10.1186/Gb-2013-14-2-R17  0.7
2012 Epstein B, Branca A, Mudge J, Bharti AK, Briskine R, Farmer AD, Sugawara M, Young ND, Sadowsky MJ, Tiffin P. Population genomics of the facultatively mutualistic bacteria Sinorhizobium meliloti and S. medicae. Plos Genetics. 8: e1002868. PMID 22876202 DOI: 10.1371/Journal.Pgen.1002868  0.695
2012 Asplen MK, Bruns E, David AS, Denison RF, Epstein B, Kaiser MC, Kaser JM, Lacroix C, Mohl EK, Quiram G, Prescott K, Stanton-Geddes J, Vincent JB, Wragg PD, May G. Do trade-offs have explanatory power for the evolution of organismal interactions? Evolution; International Journal of Organic Evolution. 66: 1297-307. PMID 22519772 DOI: 10.1111/J.1558-5646.2011.01573.X  0.713
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