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Geetu Tuteja, Ph.D. - Publications

Affiliations: 
2009 University of Pennsylvania, Philadelphia, PA, United States 
Area:
Genetics, Bioinformatics Biology
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27 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Yu W, Chakravarthi VP, Borosha S, Dilower I, Lee EB, Ratri A, Starks RR, Fields PE, Wolfe MW, Faruque MO, Tuteja G, Rumi MAK. Transcriptional regulation of in mouse trophoblast stem cells. Frontiers in Cell and Developmental Biology. 10: 918235. PMID 36589740 DOI: 10.3389/fcell.2022.918235  0.311
2021 Starks RR, Kaur H, Tuteja G. Mapping cis-regulatory elements in the midgestation mouse placenta. Scientific Reports. 11: 22331. PMID 34785717 DOI: 10.1038/s41598-021-01664-x  0.336
2020 Mesa AM, Rosenfeld CS, Tuteja G, Medrano TI, Cooke PS. The Roles of the Histone Protein Modifier EZH2 in the Uterus and Placenta. Epigenomes. 4. PMID 33732505 DOI: 10.3390/epigenomes4030020  0.311
2020 Starks RR, Abu Alhasan R, Kaur H, Pennington KA, Schulz LC, Tuteja G. Transcription Factor PLAGL1 Is Associated with Angiogenic Gene Expression in the Placenta. International Journal of Molecular Sciences. 21. PMID 33171905 DOI: 10.3390/ijms21218317  0.33
2019 Abdulghani M, Song G, Kaur H, Walley JW, Tuteja G. Comparative Analysis of the Transcriptome and Proteome during Mouse Placental Development. Journal of Proteome Research. PMID 30986076 DOI: 10.1021/Acs.Jproteome.8B00970  0.391
2019 Starks RR, Biswas A, Jain A, Tuteja G. Combined analysis of dissimilar promoter accessibility and gene expression profiles identifies tissue-specific genes and actively repressed networks. Epigenetics & Chromatin. 12: 16. PMID 30795793 DOI: 10.1186/S13072-019-0260-2  0.396
2018 Jain A, Tuteja G. TissueEnrich: Tissue-specific gene enrichment analysis. Bioinformatics (Oxford, England). PMID 30346488 DOI: 10.1093/Bioinformatics/Bty890  0.359
2018 Abdulghani M, Jain A, Tuteja G. Genome-wide identification of enhancer elements in the placenta. Placenta. PMID 30268337 DOI: 10.1016/J.Placenta.2018.09.003  0.383
2017 Jain A, Ezashi T, Roberts RM, Tuteja G. Deciphering transcriptional regulation in human embryonic stem cells specified towards a trophoblast fate. Scientific Reports. 7: 17257. PMID 29222466 DOI: 10.1038/S41598-017-17614-5  0.37
2016 Yu W, Tuteja G, Hong Y, Ratri A, Borosha S, Wolfe M, Rumi M. Regulation of SATB homeobox 1 gene expression in trophoblast stem cells Placenta. 45: 83. DOI: 10.1016/J.Placenta.2016.06.078  0.348
2015 Tuteja G, Chung T, Bejerano G. Changes in the enhancer landscape during early placental development uncover a trophoblast invasion gene-enhancer network. Placenta. PMID 26604129 DOI: 10.1016/J.Placenta.2015.11.001  0.315
2015 Tuteja G, Bejerano G. Assaying the enhancer landscape during early placental development to identify a trophoblast invasion transcriptional code and gene-enhancer network Placenta. 36: A8. DOI: 10.1016/J.Placenta.2015.07.209  0.358
2014 Tuteja G, Moreira KB, Chung T, Chen J, Wenger AM, Bejerano G. Automated discovery of tissue-targeting enhancers and transcription factors from binding motif and gene function data. Plos Computational Biology. 10: e1003449. PMID 24499934 DOI: 10.1371/Journal.Pcbi.1003449  0.454
2013 Wenger AM, Clarke SL, Notwell JH, Chung T, Tuteja G, Guturu H, Schaar BT, Bejerano G. The enhancer landscape during early neocortical development reveals patterns of dense regulation and co-option. Plos Genetics. 9: e1003728. PMID 24009522 DOI: 10.1371/Journal.Pgen.1003728  0.415
2013 Tuteja G, Wenger A, Moreira KB, Chung T, Bejerano G. Genomic approaches for the identification of genes and enhancers regulating placenta development Placenta. 34: A69-A70. DOI: 10.1016/J.Placenta.2013.06.210  0.357
2012 Li Z, Gadue P, Chen K, Jiao Y, Tuteja G, Schug J, Li W, Kaestner KH. Foxa2 and H2A.Z mediate nucleosome depletion during embryonic stem cell differentiation. Cell. 151: 1608-16. PMID 23260146 DOI: 10.1016/J.Cell.2012.11.018  0.505
2012 Li Z, Tuteja G, Schug J, Kaestner KH. Foxa1 and Foxa2 are essential for sexual dimorphism in liver cancer. Cell. 148: 72-83. PMID 22265403 DOI: 10.1016/J.Cell.2011.11.026  0.494
2012 Li Z, Tuteja G, Schug J, Kaestner KH. Abstract 5112: Foxa1 and Foxa2 are essential for gender dimorphism in liver cancer Cancer Research. 72: 5112-5112. DOI: 10.1158/1538-7445.Am2012-5112  0.484
2011 Li Z, Schug J, Tuteja G, White P, Kaestner KH. The nucleosome map of the mammalian liver. Nature Structural & Molecular Biology. 18: 742-6. PMID 21623366 DOI: 10.1038/Nsmb.2060  0.601
2011 Soccio RE, Tuteja G, Everett LJ, Li Z, Lazar MA, Kaestner KH. Species-specific strategies underlying conserved functions of metabolic transcription factors. Molecular Endocrinology (Baltimore, Md.). 25: 694-706. PMID 21292830 DOI: 10.1210/Me.2010-0454  0.555
2010 Lefterova MI, Steger DJ, Zhuo D, Qatanani M, Mullican SE, Tuteja G, Manduchi E, Grant GR, Lazar MA. Cell-specific determinants of peroxisome proliferator-activated receptor gamma function in adipocytes and macrophages. Molecular and Cellular Biology. 30: 2078-89. PMID 20176806 DOI: 10.1128/Mcb.01651-09  0.409
2009 Le Lay J, Tuteja G, White P, Dhir R, Ahima R, Kaestner KH. CRTC2 (TORC2) contributes to the transcriptional response to fasting in the liver but is not required for the maintenance of glucose homeostasis. Cell Metabolism. 10: 55-62. PMID 19583954 DOI: 10.1016/J.Cmet.2009.06.006  0.537
2009 Tuteja G, White P, Schug J, Kaestner KH. Extracting transcription factor targets from ChIP-Seq data. Nucleic Acids Research. 37: e113. PMID 19553195 DOI: 10.1093/Nar/Gkp536  0.503
2009 Li Z, White P, Tuteja G, Rubins N, Sackett S, Kaestner KH. Foxa1 and Foxa2 regulate bile duct development in mice. The Journal of Clinical Investigation. 119: 1537-45. PMID 19436110 DOI: 10.1172/Jci38201  0.637
2008 Tuteja G, Jensen ST, White P, Kaestner KH. Cis-regulatory modules in the mammalian liver: composition depends on strength of Foxa2 consensus site. Nucleic Acids Research. 36: 4149-57. PMID 18556755 DOI: 10.1093/Nar/Gkn366  0.584
2007 Tuteja G, Kaestner KH. Forkhead transcription factors II. Cell. 131: 192. PMID 17923097 DOI: 10.1016/J.Cell.2007.09.016  0.491
2007 Tuteja G, Kaestner KH. SnapShot: forkhead transcription factors I. Cell. 130: 1160. PMID 17889656 DOI: 10.1016/J.Cell.2007.09.005  0.523
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