Aaron M. Tarone, Ph.D. - Publications

Texas A & M University, College Station, TX, United States 
genetics, genomics, evolution, ecology, forensic science, diptera, bacteria

56 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Cuttiford L, Pimsler ML, Heo CC, Zheng L, Karunaratne I, Trissini G, Tarone AM, Lambiase S, Cammack JA, Tomberlin JK. Evaluation of Development Datasets for Hermetia illucens (L.) (Diptera: Stratiomyidae) for Estimating the Time of Placement of Human and Swine Remains in Texas, USA. Journal of Medical Entomology. PMID 33970239 DOI: 10.1093/jme/tjab081  1
2021 Olafson PU, Aksoy S, Attardo GM, Buckmeier G, Chen X, Coates CJ, Davis M, Dykema J, Emrich SJ, Friedrich M, Holmes CJ, Ioannidis P, Jansen EN, Jennings EC, Lawson D, ... ... Tarone AM, et al. The genome of the stable fly, Stomoxys calcitrans, reveals potential mechanisms underlying reproduction, host interactions, and novel targets for pest control. Bmc Biology. 19: 41. PMID 33750380 DOI: 10.1186/s12915-021-00975-9  0.68
2020 Andere AA, Pimsler ML, Tarone AM, Picard CJ. The genomes of a monogenic fly: views of primitive sex chromosomes. Scientific Reports. 10: 15728. PMID 32978490 DOI: 10.1038/s41598-020-72880-0  1
2020 El-Hefnawy AA, Abul Dahab FF, Ibrahim AA, Salama EM, Mahmoud SH, Sanford MR, Kovar SJ, Tarone AM. Developmental Plasticity of the Flesh Fly Blaesoxipha plinthopyga (Diptera: Sarcophagidae) on Different Substrates. Journal of Medical Entomology. PMID 32785585 DOI: 10.1093/Jme/Tjaa107  0.4
2020 Jonika MM, Hjelmen CE, Faris AM, McGuane AS, Tarone AM. An Evaluation of Differentially Spliced Genes as Markers of Sex for Forensic Entomology* † ‡. Journal of Forensic Sciences. PMID 32501598 DOI: 10.1111/1556-4029.14461  0.4
2020 Hjelmen CE, Parrott JJ, Srivastav SP, McGuane AS, Ellis LL, Stewart AD, Johnston JS, Tarone AM. Effect of Phenotype Selection on Genome Size Variation in Two Species of Diptera. Genes. 11. PMID 32093067 DOI: 10.3390/Genes11020218  0.68
2020 Lesne P, Srivastav SP, El-Hefnawy A, Parrott JJ, Sanford MR, Tarone AM. Facultative Viviparity in a Flesh Fly (Diptera: Sarcophagidae): Forensic Implications of High Variability in Rates of Oviparity in Blaesoxipha plinthopyga (Diptera: Sarcophagidae). Journal of Medical Entomology. PMID 31909421 DOI: 10.1093/Jme/Tjz230  0.68
2020 Rusch TW, Faris AM, Beebe LEJ, Tomberlin JK, Tarone AM. The upper thermal tolerance for a Texas population of the hairy maggot blow fly Chrysomya rufifacies Macquart (Diptera: Calliphoridae) Ecological Entomology. 45: 1146-1157. DOI: 10.1111/Een.12902  0.56
2019 Rusch TW, Adutwumwaah A, Beebe LEJ, Tomberlin JK, Tarone AM. The upper thermal tolerance of the secondary screwworm, Cochliomyia macellaria Fabricius (Diptera: Calliphoridae). Journal of Thermal Biology. 85: 102405. PMID 31657745 DOI: 10.1016/J.Jtherbio.2019.102405  0.56
2019 Pimsler ML, Sze SH, Saenz S, Fu S, Tomberlin JK, Tarone AM. Gene expression correlates of facultative predation in the blow fly (Diptera: Calliphoridae). Ecology and Evolution. 9: 8690-8701. PMID 31410272 DOI: 10.1002/Ece3.5413  1
2019 Fu S, Chang PL, Friesen ML, Teakle NL, Tarone AM, Sze SH. Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus. Bmc Genomics. 20: 425. PMID 31167652 DOI: 10.1186/S12864-019-5702-5  0.68
2019 Zhang Y, Pechal JL, Schmidt CJ, Jordan HR, Wang WW, Benbow ME, Sze SH, Tarone AM. Machine learning performance in a microbial molecular autopsy context: A cross-sectional postmortem human population study. Plos One. 14: e0213829. PMID 30986212 DOI: 10.1371/Journal.Pone.0213829  0.68
2017 Singh B, Minick KJ, Strickland MS, Wickings KG, Crippen TL, Tarone AM, Benbow ME, Sufrin N, Tomberlin JK, Pechal JL. Temporal and Spatial Impact of Human Cadaver Decomposition on Soil Bacterial and Arthropod Community Structure and Function. Frontiers in Microbiology. 8: 2616. PMID 29354106 DOI: 10.3389/Fmicb.2017.02616  0.56
2017 Sze SH, Parrott JJ, Tarone AM. A divide-and-conquer algorithm for large-scale de novo transcriptome assembly through combining small assemblies from existing algorithms. Bmc Genomics. 18: 895. PMID 29244008 DOI: 10.1186/s12864-017-4270-9  0.68
2017 Tarone AM, Sanford MR. Is PMI the Hypothesis or the Null Hypothesis? Journal of Medical Entomology. 54: 1109-1115. PMID 28874020 DOI: 10.1093/Jme/Tjx119  0.4
2017 Sze SH, Pimsler ML, Tomberlin JK, Jones CD, Tarone AM. A scalable and memory-efficient algorithm for de novo transcriptome assembly of non-model organisms. Bmc Genomics. 18: 387. PMID 28589866 DOI: 10.1186/S12864-017-3735-1  1
2017 Yuan Y, Zhang Y, Fu S, Crippen TL, Visi DK, Benbow ME, Allen MS, Tomberlin JK, Sze SH, Tarone AM. Genome Sequence of a Providencia stuartii Strain Isolated from Luciliasericata Salivary Glands. Genome Announcements. 5. PMID 28450516 DOI: 10.1128/Genomea.00250-17  0.68
2016 Yuan Y, Zhang Y, Fu S, Crippen TL, Visi DK, Benbow ME, Allen MS, Tomberlin JK, Sze SH, Tarone AM. Genome Sequence of a Proteus mirabilis Strain Isolated from the Salivary Glands of Larval Lucilia sericata. Genome Announcements. 4. PMID 27469950 DOI: 10.1128/Genomea.00672-16  0.68
2016 Liu W, Longnecker M, Tarone AM, Tomberlin JK. Responses of Lucilia sericata (Diptera: Calliphoridae) to compounds from microbial decomposition of larval resources Animal Behaviour. 115: 217-225. DOI: 10.1016/J.Anbehav.2016.03.022  1
2015 Fu S, Tarone AM, Sze SH. Heuristic pairwise alignment of de Bruijn graphs to facilitate simultaneous transcript discovery in related organisms from RNA-Seq data. Bmc Genomics. 16: S5. PMID 26576690 DOI: 10.1186/1471-2164-16-S11-S5  0.68
2015 Pechal JL, Benbow ME, Tomberlin JK, Crippen TL, Tarone AM, Singh B, Lenhart PA. Field Documentation of Unusual Post-Mortem Arthropod Activity on Human Remains. Journal of Medical Entomology. 52: 105-8. PMID 26336287 DOI: 10.1093/Jme/Tju012  0.56
2015 Singh B, Crippen TL, Zheng L, Fields AT, Yu Z, Ma Q, Wood TK, Dowd SE, Flores M, Tomberlin JK, Tarone AM. A metagenomic assessment of the bacteria associated with Lucilia sericata and Lucilia cuprina (Diptera: Calliphoridae). Applied Microbiology and Biotechnology. 99: 869-83. PMID 25306907 DOI: 10.1007/S00253-014-6115-7  1
2015 Edman RM, Linger RJ, Belikoff EJ, Li F, Sze SH, Tarone AM, Scott MJ. Functional characterization of calliphorid cell death genes and cellularization gene promoters for controlling gene expression and cell viability in early embryos. Insect Molecular Biology. 24: 58-70. PMID 25225046 DOI: 10.1111/Imb.12135  1
2014 Pimsler ML, Pape T, Johnston JS, Wharton RA, Parrott JJ, Restuccia D, Sanford MR, Tomberlin JK, Tarone AM. Structural and Genetic Investigation of the Egg and First-Instar Larva of an Egg-Laying Population of Blaesoxipha plinthopyga (Diptera: Sarcophagidae), a Species of Forensic Importance. Journal of Medical Entomology. 51: 1283-95. PMID 26309319 DOI: 10.1603/Me14029  1
2014 Sze SH, Tarone AM. A memory-efficient algorithm to obtain splicing graphs and de novo expression estimates from de Bruijn graphs of RNA-Seq data. Bmc Genomics. 15: S6. PMID 25082000 DOI: 10.1186/1471-2164-15-S5-S6  0.68
2014 Ellis LL, Huang W, Quinn AM, Ahuja A, Alfrejd B, Gomez FE, Hjelmen CE, Moore KL, Mackay TF, Johnston JS, Tarone AM. Intrapopulation genome size variation in D. melanogaster reflects life history variation and plasticity. Plos Genetics. 10: e1004522. PMID 25057905 DOI: 10.1371/Journal.Pgen.1004522  1
2014 Tarone AM, Tomberlin JK, Johnston JS, Wallace JR, Benbow ME, Mohr R, Mondor EB, Vanlaerhoven SL. Reply: A correspondence from a maturing discipline. Journal of Medical Entomology. 51: 490-2. PMID 24897841 DOI: 10.1603/Me14043  1
2014 Owings CG, Spiegelman C, Tarone AM, Tomberlin JK. Developmental variation among Cochliomyia macellaria Fabricius (Diptera: Calliphoridae) populations from three ecoregions of Texas, USA. International Journal of Legal Medicine. 128: 709-17. PMID 24811885 DOI: 10.1007/S00414-014-1014-0  0.56
2014 Watanabe J, Hattori M, Berriman M, Lehane MJ, Hall N, Solano P, Aksoy S, Hide W, Touré Y, Attardo GM, Darby AC, Toyoda A, Hertz-Fowler C, Larkin DM, Cotton JA, ... ... Tarone AM, et al. Genome sequence of the tsetse fly (Glossina morsitans ): Vector of African trypanosomiasis Science. 344: 380-386. PMID 24763584 DOI: 10.1126/Science.1249656  1
2014 Huang W, Massouras A, Inoue Y, Peiffer J, Ràmia M, Tarone AM, Turlapati L, Zichner T, Zhu D, Lyman RF, Magwire MM, Blankenburg K, Carbone MA, Chang K, Ellis LL, et al. Natural variation in genome architecture among 205 Drosophila melanogaster Genetic Reference Panel lines. Genome Research. 24: 1193-208. PMID 24714809 DOI: 10.1101/Gr.171546.113  1
2014 Scott MJ, Pimsler ML, Tarone AM. Sex determination mechanisms in the Calliphoridae (blow flies). Sexual Development : Genetics, Molecular Biology, Evolution, Endocrinology, Embryology, and Pathology of Sex Determination and Differentiation. 8: 29-37. PMID 24401179 DOI: 10.1159/000357132  1
2014 Pechal JL, Crippen TL, Benbow ME, Tarone AM, Dowd S, Tomberlin JK. The potential use of bacterial community succession in forensics as described by high throughput metagenomic sequencing. International Journal of Legal Medicine. 128: 193-205. PMID 23749255 DOI: 10.1007/S00414-013-0872-1  0.56
2013 Pechal JL, Crippen TL, Tarone AM, Lewis AJ, Tomberlin JK, Benbow ME. Microbial community functional change during vertebrate carrion decomposition. Plos One. 8: e79035. PMID 24265741 DOI: 10.1371/Journal.Pone.0079035  1
2013 Zheng L, Crippen TL, Holmes L, Singh B, Pimsler ML, Benbow ME, Tarone AM, Dowd S, Yu Z, Vanlaerhoven SL, Wood TK, Tomberlin JK. Bacteria mediate oviposition by the black soldier fly, Hermetia illucens (L.), (Diptera: Stratiomyidae). Scientific Reports. 3: 2563. PMID 23995019 DOI: 10.1038/Srep02563  1
2013 Zheng L, Crippen TL, Singh B, Tarone AM, Dowd S, Yu Z, Wood TK, Tomberlin JK. A survey of bacterial diversity from successive life stages of black soldier fly (Diptera: Stratiomyidae) by using 16S rDNA pyrosequencing. Journal of Medical Entomology. 50: 647-58. PMID 23802462 DOI: 10.1603/Me12199  0.56
2013 Picard CJ, Deblois K, Tovar F, Bradley JL, Johnston JS, Tarone AM. Increasing precision in development-based postmortem interval estimates: what's sex got to do with it? Journal of Medical Entomology. 50: 425-31. PMID 23540132 DOI: 10.1603/Me12051  1
2012 Tarone AM, McIntyre LM, Harshman LG, Nuzhdin SV. Genetic variation in the Yolk protein expression network of Drosophila melanogaster: sex-biased negative correlations with longevity. Heredity. 109: 226-34. PMID 22760232 DOI: 10.1038/Hdy.2012.34  1
2012 Picard CJ, Johnston JS, Tarone AM. Genome sizes of forensically relevant Diptera. Journal of Medical Entomology. 49: 192-7. PMID 22308788 DOI: 10.1603/Me11075  1
2012 Sze SH, Dunham JP, Carey B, Chang PL, Li F, Edman RM, Fjeldsted C, Scott MJ, Nuzhdin SV, Tarone AM. A de novo transcriptome assembly of Lucilia sericata (Diptera: Calliphoridae) with predicted alternative splices, single nucleotide polymorphisms and transcript expression estimates. Insect Molecular Biology. 21: 205-21. PMID 22283785 DOI: 10.1111/J.1365-2583.2011.01127.X  1
2012 Ma Q, Fonseca A, Liu W, Fields AT, Pimsler ML, Spindola AF, Tarone AM, Crippen TL, Tomberlin JK, Wood TK. Proteus mirabilis interkingdom swarming signals attract blow flies. The Isme Journal. 6: 1356-66. PMID 22237540 DOI: 10.1038/Ismej.2011.210  1
2012 Tomberlin JK, Crippen TL, Tarone AM, Singh B, Adams K, Rezenom YH, Benbow ME, Flores M, Longnecker M, Pechal JL, Russell DH, Beier RC, Wood TK. Interkingdom responses of flies to bacteria mediated by fly physiology and bacterial quorum sensing Animal Behaviour. 84: 1449-1456. DOI: 10.1016/J.Anbehav.2012.09.013  1
2011 Tarone AM, Picard CJ, Spiegelman C, Foran DR. Population and temperature effects on Lucilia sericata (Diptera: Calliphoridae) body size and minimum development time. Journal of Medical Entomology. 48: 1062-8. PMID 21936326 DOI: 10.1603/Me11004  1
2011 Wang X, Kim Y, Hong SH, Ma Q, Brown BL, Pu M, Tarone AM, Benedik MJ, Peti W, Page R, Wood TK. Antitoxin MqsA helps mediate the bacterial general stress response. Nature Chemical Biology. 7: 359-66. PMID 21516113 DOI: 10.1038/Nchembio.560  1
2011 Turner TL, Stewart AD, Fields AT, Rice WR, Tarone AM. Population-based resequencing of experimentally evolved populations reveals the genetic basis of body size variation in Drosophila melanogaster. Plos Genetics. 7: e1001336. PMID 21437274 DOI: 10.1371/Journal.Pgen.1001336  1
2011 Tomberlin JK, Benbow ME, Tarone AM, Mohr RM. Basic research in evolution and ecology enhances forensics. Trends in Ecology & Evolution. 26: 53-5. PMID 21185105 DOI: 10.1016/J.Tree.2010.12.001  1
2011 Tarone AM, Foran DR. Gene expression during blow fly development: improving the precision of age estimates in forensic entomology. Journal of Forensic Sciences. 56: S112-22. PMID 21155802 DOI: 10.1111/J.1556-4029.2010.01632.X  1
2011 Tomberlin JK, Mohr R, Benbow ME, Tarone AM, VanLaerhoven S. A roadmap for bridging basic and applied research in forensic entomology. Annual Review of Entomology. 56: 401-21. PMID 20822449 DOI: 10.1146/Annurev-Ento-051710-103143  1
2010 Nemri A, Atwell S, Tarone AM, Huang YS, Zhao K, Studholme DJ, Nordborg M, Jones JD. Genome-wide survey of Arabidopsis natural variation in downy mildew resistance using combined association and linkage mapping. Proceedings of the National Academy of Sciences of the United States of America. 107: 10302-7. PMID 20479233 DOI: 10.1073/Pnas.0913160107  1
2010 Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, Jiang R, Muliyati NW, Zhang X, Amer MA, Baxter I, et al. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature. 465: 627-31. PMID 20336072 DOI: 10.1038/Nature08800  1
2008 Tarone AM, Foran DR. Generalized additive models and Lucilia sericata growth: assessing confidence intervals and error rates in forensic entomology. Journal of Forensic Sciences. 53: 942-8. PMID 18503527 DOI: 10.1111/J.1556-4029.2008.00744.X  1
2008 Ma X, Tarone AM, Li W. Mapping genetically compensatory pathways from synthetic lethal interactions in yeast. Plos One. 3: e1922. PMID 18398455 DOI: 10.1371/Journal.Pone.0001922  0.32
2007 Tarone AM, Jennings KC, Foran DR. Aging blow fly eggs using gene expression: a feasibility study. Journal of Forensic Sciences. 52: 1350-4. PMID 18093065 DOI: 10.1111/J.1556-4029.2007.00587.X  1
2006 Tarone AM, Foran DR. Components of developmental plasticity in a Michigan population of Lucilia sericata (Diptera: Calliphoridae). Journal of Medical Entomology. 43: 1023-33. PMID 17017243 DOI: 10.1603/0022-2585(2006)43[1023:Codpia]2.0.Co;2  1
2005 Tarone AM, Nasser YM, Nuzhdin SV. Genetic variation for expression of the sex determination pathway genes in Drosophila melanogaster. Genetical Research. 86: 31-40. PMID 16181521 DOI: 10.1017/S0016672305007706  1
2004 Barbash DA, Awadalla P, Tarone AM. Functional divergence caused by ancient positive selection of a Drosophila hybrid incompatibility locus. Plos Biology. 2: e142. PMID 15208709 DOI: 10.1371/Journal.Pbio.0020142  1
2003 Barbash DA, Siino DF, Tarone AM, Roote J. A rapidly evolving MYB-related protein causes species isolation in Drosophila. Proceedings of the National Academy of Sciences of the United States of America. 100: 5302-7. PMID 12695567 DOI: 10.1073/Pnas.0836927100  1
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