Zachary L. Fuller - Related publications

2012-2017 Biology Pennsylvania State University, State College, PA, United States 
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50 most relevant papers in past 60 days:
Year Citation  Score
2021 Hu Q, Ma Y, Mandáková T, Shi S, Chen C, Sun P, Zhang L, Feng L, Zheng Y, Feng X, Yang W, Jiang J, Li T, Zhou P, Yu Q, et al. Genome evolution of the psammophyte for desert adaptation and further speciation. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34649989 DOI: 10.1073/pnas.2025711118   
2021 Gompert Z, Feder JL, Nosil P. Natural selection drives genome-wide evolution via chance genetic associations. Molecular Ecology. PMID 34704650 DOI: 10.1111/mec.16247   
2021 Birchler JA, Veitia RA. One Hundred Years of Gene Balance: How Stoichiometric Issues Affect Gene Expression, Genome Evolution, and Quantitative Traits. Cytogenetic and Genome Research. 1-22. PMID 34814143 DOI: 10.1159/000519592   
2021 Murawski AM, Rittenbach K, DeCoste CJ, Laevsky G, Brynildsen MP. Counting Chromosomes in Individual Bacteria to Quantify Their Impacts on Persistence. Methods in Molecular Biology (Clifton, N.J.). 2357: 125-146. PMID 34590256 DOI: 10.1007/978-1-0716-1621-5_9   
2021 Evans BJ, Peter BM, Melnick DJ, Andayani N, Supriatna J, Zhu J, Tosi AJ. Mitonuclear interactions and introgression genomics of macaque monkeys () highlight the influence of behaviour on genome evolution. Proceedings. Biological Sciences. 288: 20211756. PMID 34610767 DOI: 10.1098/rspb.2021.1756   
2021 Denoyelle L, de Villemereuil P, Boyer F, Khelifi M, Gaffet C, Alberto F, Benjelloun B, Pompanon F. Genetic Variations and Differential DNA Methylation to Face Contrasted Climates in Small Ruminants: An Analysis on Traditionally-Managed Sheep and Goats. Frontiers in Genetics. 12: 745284. PMID 34650601 DOI: 10.3389/fgene.2021.745284   
2021 García-Galán A, Baranowski E, Hygonenq MC, Walch M, Croville G, Citti C, De la Fe C, Nouvel LX. Genome mosaicism in field strains of as footprints of in-host horizontal chromosomal transfer. Applied and Environmental Microbiology. AEM0166121. PMID 34669423 DOI: 10.1128/AEM.01661-21   
2021 Ma B, Wang X, Lei C, Tang Y, He J, Gao Y, Zhang Y, Wang H. Identification of Three Novel PmGRI1 Genomic Resistance Islands and One Multidrug Resistant Hybrid Structure of Tn-like Transposon and PmGRI1 in . Antibiotics (Basel, Switzerland). 10. PMID 34680847 DOI: 10.3390/antibiotics10101268   
2021 Zhang S, Wang R, Huang C, Zhang L, Sun L. Modulation of Global Gene Expression by Aneuploidy and CNV of Dosage Sensitive Regulatory Genes. Genes. 12. PMID 34681000 DOI: 10.3390/genes12101606   
2021 Sharma R, Cockram J, Gardner KA, Russell J, Ramsay L, Thomas WTB, O'Sullivan DM, Powell W, Mackay IJ. Trends of genetic changes uncovered by Env- and Eigen-GWAS in wheat and barley. Tag. Theoretical and Applied Genetics. Theoretische Und Angewandte Genetik. PMID 34778903 DOI: 10.1007/s00122-021-03991-z   
2021 Yamamoto T. Genomic Aberrations Associated with the Pathophysiological Mechanisms of Neurodevelopmental Disorders. Cells. 10. PMID 34571966 DOI: 10.3390/cells10092317   
2021 Baptista RP, Li Y, Sateriale A, Brooks KL, Tracey A, Sanders MJ, Ansell BRE, Jex AR, Cooper GW, Smith ED, Xiao R, Dumaine JE, Georgeson P, Pope B, Berriman M, et al. Long-read assembly and comparative evidence-based reanalysis of genome sequences reveals expanded transporter repertoire and duplication of entire chromosome ends including subtelomeric regions. Genome Research. PMID 34764149 DOI: 10.1101/gr.275325.121   
2021 Tao X, Liu B, Dou Q. The karyotype polymorphisms as revealed by FISH with tandem repeats and single-gene probes. Comparative Cytogenetics. 15: 375-392. PMID 34804380 DOI: 10.3897/compcytogen.v15.i4.71525   
2021 Zhou J, Wu P, Xiong Z, Liu N, Zhao N, Ji M, Qiu Y, Yang B. Chromosome-Level Genome Assembly Reveals Significant Gene Expansion in the Toll and IMD Signaling Pathways of . Frontiers in Genetics. 12: 728418. PMID 34777464 DOI: 10.3389/fgene.2021.728418   
2021 Ke F, Vasseur L, Yi H, Yang L, Wei X, Wang B, Kang M. Gene flow, linked selection, and divergent sorting of ancient polymorphism shape genomic divergence landscape in a group of edaphic specialists. Molecular Ecology. PMID 34664755 DOI: 10.1111/mec.16226   
2021 Wu Y, Lin F, Zhou Y, Wang J, Sun S, Wang B, Zhang Z, Li G, Lin X, Wang X, Sun Y, Dong Q, Xu C, Gong L, Wendel JF, et al. Genomic mosaicism due to homoeologous exchange generates extensive phenotypic diversity in nascent allopolyploids. National Science Review. 8: nwaa277. PMID 34691642 DOI: 10.1093/nsr/nwaa277   
2021 Acs-Szabo L, Papp LA, Sipiczki M, Miklos I. Genome Comparisons of the Fission Yeasts Reveal Ancient Collinear Loci Maintained by Natural Selection. Journal of Fungi (Basel, Switzerland). 7. PMID 34682285 DOI: 10.3390/jof7100864   
2021 Sassi FMC, Moreira-Filho O, Deon GA, Sember A, Bertollo LAC, Liehr T, Oliveira VCS, Viana PF, Feldberg E, Vicari MR, Cioffi MB. Adding New Pieces to the Puzzle of Karyotype Evolution in (Siluriformes, Loricariidae): Investigation of Amazonian Species. Biology. 10. PMID 34571799 DOI: 10.3390/biology10090922   
2021 Xu Q, Jin L, Zhang Y, Zhang X, Zheng C, Leebens-Mack JH, Sankoff D. Ancestral Flowering Plant Chromosomes and Gene Orders Based on Generalized Adjacencies and Chromosomal Gene Co-Occurrences. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 28: 1156-1179. PMID 34783601 DOI: 10.1089/cmb.2021.0340   
2021 Varshney RK, Roorkiwal M, Sun S, Bajaj P, Chitikineni A, Thudi M, Singh NP, Du X, Upadhyaya HD, Khan AW, Wang Y, Garg V, Fan G, Cowling WA, Crossa J, et al. A chickpea genetic variation map based on the sequencing of 3,366 genomes. Nature. PMID 34759320 DOI: 10.1038/s41586-021-04066-1   
2021 Zhang L, Wang S, Su C, Harris AJ, Zhao L, Su N, Wang JR, Duan L, Chang ZY. Comparative Chloroplast Genomics and Phylogenetic Analysis of (Zygophyllaceae) of China. Frontiers in Plant Science. 12: 723622. PMID 34630471 DOI: 10.3389/fpls.2021.723622   
2021 Janko K, Bartoš O, Kočí J, Roslein J, Drdová EJ, Kotusz J, Eisner J, Mokrejš M, Štefková-Kašparová E. Genome fractionation and loss of heterozygosity in hybrids and polyploids: mechanisms, consequences for selection, and link to gene function. Molecular Biology and Evolution. PMID 34410426 DOI: 10.1093/molbev/msab249   
2021 Chatterjee N, Zhang X. CRISPR approach in environmental chemical screening focusing on population variability. The Journal of Toxicological Sciences. 46: 499-507. PMID 34719552 DOI: 10.2131/jts.46.499   
2021 Keeling CI, Campbell EO, Batista PD, Shegelski VA, Trevoy SAL, Huber DPW, Janes JK, Sperling FAH. Chromosome-level genome assembly reveals genomic architecture of northern range expansion in the mountain pine beetle, Dendroctonus ponderosae Hopkins (Coleoptera: Curculionidae). Molecular Ecology Resources. PMID 34637588 DOI: 10.1111/1755-0998.13528   
2021 Adolfi MC, Du K, Kneitz S, Cabau C, Zahm M, Klopp C, Feron R, Paixão RV, Varela ES, de Almeida FL, de Oliveira MA, Nóbrega RH, Lopez-Roques C, Iampietro C, Lluch J, et al. A duplicated copy of id2b is an unusual sex-determining candidate gene on the Y chromosome of arapaima (Arapaima gigas). Scientific Reports. 11: 21544. PMID 34732792 DOI: 10.1038/s41598-021-01066-z   
2021 Adolfi MC, Du K, Kneitz S, Cabau C, Zahm M, Klopp C, Feron R, Paixão RV, Varela ES, de Almeida FL, de Oliveira MA, Nóbrega RH, Lopez-Roques C, Iampietro C, Lluch J, et al. A duplicated copy of id2b is an unusual sex-determining candidate gene on the Y chromosome of arapaima (Arapaima gigas). Scientific Reports. 11: 21544. PMID 34732792 DOI: 10.1038/s41598-021-01066-z   
2021 Wu B, Chen X, Yu M, Ren J, Hu J, Shao C, Zhou L, Sun X, Yu T, Zheng Y, Wang Y, Wang Z, Zhang H, Fan G, Liu Z. Chromosome-level genome and population genomic analysis provide insights into the evolution and environmental adaptation of Jinjiang oyster Crassostrea ariakensis. Molecular Ecology Resources. PMID 34800349 DOI: 10.1111/1755-0998.13556   
2021 Schultz DT, Francis WR, McBroome JD, Christianson LM, Haddock SHD, Green RE. A chromosome-scale genome assembly and karyotype of the ctenophore Hormiphora californensis. G3 (Bethesda, Md.). PMID 34545398 DOI: 10.1093/g3journal/jkab302   
2021 Ho EKH, Bellis ES, Calkins J, Adrion JR, Latta Iv LC, Schaack S. Engines of change: Transposable element mutation rates are high and variable within Daphnia magna. Plos Genetics. 17: e1009827. PMID 34723969 DOI: 10.1371/journal.pgen.1009827   
2021 Shekhovtsov SV, Efremov YR, Poluboyarova TV, Peltek SE. Variation in nuclear genome size within the Eisenia nordenskioldi complex (Lumbricidae, Annelida). Vavilovskii Zhurnal Genetiki I Selektsii. 25: 647-651. PMID 34782884 DOI: 10.18699/VJ21.073   
2021 de Moraes RLR, Sassi FMC, Bertollo LAC, Marinho MMF, Viana PF, Feldberg E, Oliveira VCS, Deon GA, Al-Rikabi ABH, Liehr T, Cioffi MB. Tracking the Evolutionary Trends Among Small-Size Fishes of the Genus (Characiforme, Lebiasinidae): New Insights From a Molecular Cytogenetic Perspective. Frontiers in Genetics. 12: 769984. PMID 34691160 DOI: 10.3389/fgene.2021.769984   
2021 Xie D, Chen G, Meng X, Wang H, Bi X, Fang M, Yang C, Zhou Y, Long E, Feng S. Comparable Number of Genes Having Experienced Positive Selection among Great Ape Species. Animals : An Open Access Journal From Mdpi. 11. PMID 34827995 DOI: 10.3390/ani11113264   
2021 Tian R, Yang C, Geng Y, Seim I, Yang G. Genomewide analysis of sperm whale E2 ubiquitin conjugating enzyme genes. Journal of Genetics. 100. PMID 34787113   
2021 Qiao Q, Edger PP, Xue L, Qiong, Lu J, Zhang Y, Cao Q, Yocca AE, Platts AE, Knapp SJ, Van Montagu M, Van de Peer Y, Lei J, Zhang T. Evolutionary history and pan-genome dynamics of strawberry ( spp.). Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 34697247 DOI: 10.1073/pnas.2105431118   
2021 Yocca AE, Edger PP. Current status and future perspectives on the evolution of cis-regulatory elements in plants. Current Opinion in Plant Biology. 65: 102139. PMID 34837823 DOI: 10.1016/j.pbi.2021.102139   
2021 Wu H, Hu Q, Ai F, Zhang J, Kang M, Lin H, Xu Z, Dong G, Ma T, Liu J. A chromosome-level genome assembly for the wild kiwifruit Actinidia kolomikta provides insights into canker resistance and fruit development. Plant Biotechnology Journal. PMID 34786806 DOI: 10.1111/pbi.13748   
2021 Morgenthaler AB, Fritts RK, Copley SD. Amplicon remodeling and genomic mutations drive population dynamics after segmental amplification. Molecular Biology and Evolution. PMID 34581806 DOI: 10.1093/molbev/msab289   
2021 Ma H, Jiang J, He J, Huifang L, Han L, Gong Y, Li B, Zonggang Y, Shengguo T, Zhang Y, Duan Y, Yin Y, Zeng Q, Yi J, Xinglong H, et al. Long-read assembly of the Chinese indigenous Ningxiang pig genome and identification of genetic variations in fat metabolism among different breeds. Molecular Ecology Resources. PMID 34758184 DOI: 10.1111/1755-0998.13550   
2021 Zhou Y, Zhang H, Ping H, Ding Y, Hu S, Bi G, Li C, Li H, Huang Y, Guo L, Ma X, Xia Z. Characterization of the complete chloroplast genome of (Lamiaceae). Mitochondrial Dna. Part B, Resources. 6: 3406-3408. PMID 34790877 DOI: 10.1080/23802359.2021.2000899   
2021 Pang XA, Jiao PP, Yang TG, Liu H. Complete chloroplast genome sequence of (Tamaricaceae). Mitochondrial Dna. Part B, Resources. 6: 3295-3296. PMID 34722879 DOI: 10.1080/23802359.2021.1990807   
2021 Fuchs S, Garrood WT, Beber A, Hammond A, Galizi R, Gribble M, Morselli G, Hui TJ, Willis K, Kranjc N, Burt A, Crisanti A, Nolan T. Resistance to a CRISPR-based gene drive at an evolutionarily conserved site is revealed by mimicking genotype fixation. Plos Genetics. 17: e1009740. PMID 34610011 DOI: 10.1371/journal.pgen.1009740   
2021 Jiang N, Hu S, Peng B, Li Z, Yuan X, Xiao S, Fu Y. Genome of Species Provides Insights Into the Evolution, Conifers Substrate Utilization, and Terpene Synthesis for . Frontiers in Microbiology. 12: 724451. PMID 34603250 DOI: 10.3389/fmicb.2021.724451   
2021 Alabi N, Wu Y, Bossdorf O, Rieseberg LH, Colautti RI. Genome Report: A draft genome of Alliaria petiolata (garlic mustard) as a model system for invasion genetics. G3 (Bethesda, Md.). PMID 34599816 DOI: 10.1093/g3journal/jkab339   
2021 Sattar NA, Shaheen S, Hussain F, Jamil A. Association analysis of vitamin D receptor gene polymorphisms in North England population with Type 2 diabetes mellitus. African Health Sciences. 21: 8-14. PMID 34394275 DOI: 10.4314/ahs.v21i1.3   
2021 Chen Q, Peng G, Kutcher R, Yu F. Genetic diversity and population structure of Leptosphaeria maculans isolates in Western Canada. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 34702671 DOI: 10.1016/j.jgg.2021.06.019   
2021 Li G, Guo W, Zhang Y, Cao G, Wang Z. Complete mitochondrial genome of (Artiodactyla: Cervidae). Mitochondrial Dna. Part B, Resources. 6: 3372-3374. PMID 34778556 DOI: 10.1080/23802359.2021.1997118   
2021 Zhang S, Qi H, Huang C, Yuan L, Zhang L, Wang R, Tian Y, Sun L. Interaction of Male Specific Lethal complex and genomic imbalance on global gene expression in Drosophila. Scientific Reports. 11: 19679. PMID 34608252 DOI: 10.1038/s41598-021-99268-y   
2021 Datta MS, Yelin I, Hochwald O, Kassis I, Borenstein-Levin L, Kugelman A, Kishony R. Rapid methicillin resistance diversification in Staphylococcus epidermidis colonizing human neonates. Nature Communications. 12: 6062. PMID 34663826 DOI: 10.1038/s41467-021-26392-8   
2021 Zhou Q, Jiao L, Li W, Hu Z, Li Y, Zhang H, Yang M, Xu L, Yan Y. A Novel Cre/-Based Genetic Tool for Repeated, Targeted and Markerless Gene Integration in . International Journal of Molecular Sciences. 22. PMID 34639080 DOI: 10.3390/ijms221910739   
2021 Wen G, Chen S, Fan L, Zeng L, Xu B. The complete chloroplast genome of H.S.Lo (Menispermaceae), an important traditional medicine from South China. Mitochondrial Dna. Part B, Resources. 6: 3269-3270. PMID 34712807 DOI: 10.1080/23802359.2021.1993099