Judith R. Kidd - Publications

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64/64 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2017 Nakagome S, Chinen H, Iraha A, Hokama A, Takeyama Y, Sakisaka S, Matsui T, Kidd JR, Kidd KK, Said HS, Suda W, Morita H, Hattori M, Hanihara T, Kimura R, et al. Confounding effects of microbiome on the susceptibility of TNFSF15 to Crohn's disease in the Ryukyu Islands. Human Genetics. PMID 28197769 DOI: 10.1007/S00439-017-1764-0  0.64
2017 Pakstis AJ, Kang L, Liu L, Zhang Z, Jin T, Grigorenko EL, Wendt FR, Budowle B, Hadi S, Al Qahtani MS, Morling N, Mogensen HS, Themudo GE, Soundararajan U, Rajeevan H, ... Kidd JR, et al. Increasing the reference populations for the 55 AISNP panel: the need and benefits. International Journal of Legal Medicine. PMID 28070634 DOI: 10.1007/S00414-016-1524-Z  0.64
2016 Cherni L, Pakstis AJ, Boussetta S, Elkamel S, Frigi S, Khodjet-El-Khil H, Barton A, Haigh E, Speed WC, Ben Ammar Elgaaied A, Kidd JR, Kidd KK. Genetic variation in Tunisia in the context of human diversity worldwide. American Journal of Physical Anthropology. PMID 27192181 DOI: 10.1002/Ajpa.23008  0.64
2016 Li CX, Pakstis AJ, Jiang L, Wei YL, Sun QF, Wu H, Bulbul O, Wang P, Kang LL, Kidd JR, Kidd KK. A panel of 74 AISNPs: Improved ancestry inference within Eastern Asia. Forensic Science International. Genetics. 23: 101-110. PMID 27077960 DOI: 10.1016/J.Fsigen.2016.04.002  0.64
2015 Brissenden JE, Kidd JR, Evsanaa B, Togtokh AJ, Pakstis AJ, Friedlaender F, Kidd KK, Roscoe JM. Mongolians in the Genetic Landscape of Central Asia: Exploring the Genetic Relations among Mongolians and Other World Populations. Human Biology. 87: 73-91. PMID 26829292 DOI: 10.13110/Humanbiology.87.2.0005  0.64
2015 Pakstis AJ, Haigh E, Cherni L, ElGaaied AB, Barton A, Evsanaa B, Togtokh A, Brissenden J, Roscoe J, Bulbul O, Filoglu G, Gurkan C, Meiklejohn KA, Robertson JM, Li CX, ... ... Kidd JR, et al. 52 additional reference population samples for the 55 AISNP panel. Forensic Science International. Genetics. 19: 269-271. PMID 26355664 DOI: 10.1016/J.Fsigen.2015.08.003  0.64
2015 Xu H, Wang CC, Shrestha R, Wang LX, Zhang M, He Y, Kidd JR, Kidd KK, Jin L, Li H. Inferring population structure and demographic history using Y-STR data from worldwide populations. Molecular Genetics and Genomics : Mgg. 290: 141-50. PMID 25159112 DOI: 10.1007/S00438-014-0903-8  0.64
2014 Kidd KK, Pakstis AJ, Speed WC, Lagacé R, Chang J, Wootton S, Haigh E, Kidd JR. Current sequencing technology makes microhaplotypes a powerful new type of genetic marker for forensics. Forensic Science International. Genetics. 12: 215-24. PMID 25038325 DOI: 10.1016/J.Fsigen.2014.06.014  0.64
2014 Kidd KK, Speed WC, Pakstis AJ, Furtado MR, Fang R, Madbouly A, Maiers M, Middha M, Friedlaender FR, Kidd JR. Progress toward an efficient panel of SNPs for ancestry inference. Forensic Science International. Genetics. 10: 23-32. PMID 24508742 DOI: 10.1016/J.Fsigen.2014.01.002  0.64
2013 Nievergelt CM, Maihofer AX, Shekhtman T, Libiger O, Wang X, Kidd KK, Kidd JR. Inference of human continental origin and admixture proportions using a highly discriminative ancestry informative 41-SNP panel. Investigative Genetics. 4: 13. PMID 23815888 DOI: 10.1186/2041-2223-4-13  0.64
2012 Lu Y, Kang L, Hu K, Wang C, Sun X, Chen F, Kidd JR, Kidd KK, Li H. High diversity and no significant selection signal of human ADH1B gene in Tibet. Investigative Genetics. 3: 23. PMID 23176670 DOI: 10.1186/2041-2223-3-23  0.64
2012 Stathias V, Sotiris GR, Karagiannidis I, Bourikas G, Martinis G, Papazoglou D, Tavridou A, Papanas N, Maltezos E, Theodoridis M, Vargemezis V, Manolopoulos VG, Speed WC, Kidd JR, Kidd KK, et al. Exploring genomic structure differences and similarities between the Greek and European HapMap populations: implications for association studies. Annals of Human Genetics. 76: 472-83. PMID 23061745 DOI: 10.1111/J.1469-1809.2012.00730.X  0.64
2012 Pakstis AJ, Fang R, Furtado MR, Kidd JR, Kidd KK. Mini-haplotypes as lineage informative SNPs and ancestry inference SNPs. European Journal of Human Genetics : Ejhg. 20: 1148-54. PMID 22535184 DOI: 10.1038/Ejhg.2012.69  0.64
2012 Kidd KK, Kidd JR, Speed WC, Fang R, Furtado MR, Hyland FC, Pakstis AJ. Expanding data and resources for forensic use of SNPs in individual identification. Forensic Science International. Genetics. 6: 646-52. PMID 22445421 DOI: 10.1016/J.Fsigen.2012.02.012  0.64
2012 Nakagome S, Mano S, Kozlowski L, Bujnicki JM, Shibata H, Fukumaki Y, Kidd JR, Kidd KK, Kawamura S, Oota H. Crohn's disease risk alleles on the NOD2 locus have been maintained by natural selection on standing variation. Molecular Biology and Evolution. 29: 1569-85. PMID 22319155 DOI: 10.1093/Molbev/Mss006  0.64
2012 Donnelly MP, Paschou P, Grigorenko E, Gurwitz D, Barta C, Lu RB, Zhukova OV, Kim JJ, Siniscalco M, New M, Li H, Kajuna SL, Manolopoulos VG, Speed WC, Pakstis AJ, ... Kidd JR, et al. A global view of the OCA2-HERC2 region and pigmentation. Human Genetics. 131: 683-96. PMID 22065085 DOI: 10.1007/S00439-011-1110-X  0.64
2012 Rajeevan H, Soundararajan U, Kidd JR, Pakstis AJ, Kidd KK. ALFRED: an allele frequency resource for research and teaching. Nucleic Acids Research. 40: D1010-5. PMID 22039151 DOI: 10.1093/Nar/Gkr924  0.64
2011 Kidd JR, Friedlaender F, Pakstis AJ, Furtado M, Fang R, Wang X, Nievergelt CM, Kidd KK. Single nucleotide polymorphisms and haplotypes in Native American populations. American Journal of Physical Anthropology. 146: 495-502. PMID 21913176 DOI: 10.1002/Ajpa.21560  0.64
2011 Li H, Pakstis AJ, Kidd JR, Kidd KK. Selection on the human bitter taste gene, TAS2R16, in Eurasian populations. Human Biology. 83: 363-77. PMID 21740153 DOI: 10.3378/027.083.0303  0.64
2011 Sampson JN, Kidd KK, Kidd JR, Zhao H. Selecting SNPs to identify ancestry. Annals of Human Genetics. 75: 539-53. PMID 21668909 DOI: 10.1111/J.1469-1809.2011.00656.X  0.64
2011 Li H, Gu S, Han Y, Xu Z, Pakstis AJ, Jin L, Kidd JR, Kidd KK. Diversification of the ADH1B gene during expansion of modern humans. Annals of Human Genetics. 75: 497-507. PMID 21592108 DOI: 10.1111/J.1469-1809.2011.00651.X  0.64
2011 Palejev D, Hwang W, Landi N, Eastman M, Frost SJ, Fulbright RK, Kidd JR, Kidd KK, Mason GF, Mencl WE, Yrigollen C, Pugh KR, Grigorenko EL. An application of the elastic net for an endophenotype analysis. Behavior Genetics. 41: 120-4. PMID 21229297 DOI: 10.1007/S10519-011-9443-8  0.64
2011 Kidd JR, Friedlaender FR, Speed WC, Pakstis AJ, De La Vega FM, Kidd KK. Analyses of a set of 128 ancestry informative single-nucleotide polymorphisms in a global set of 119 population samples. Investigative Genetics. 2: 1. PMID 21208434 DOI: 10.1186/2041-2223-2-1  0.64
2010 Duffy VB, Hayes JE, Davidson AC, Kidd JR, Kidd KK, Bartoshuk LM. Vegetable Intake in College-Aged Adults Is Explained by Oral Sensory Phenotypes and TAS2R38 Genotype. Chemosensory Perception. 3: 137-148. PMID 21157576 DOI: 10.1007/S12078-010-9079-8  0.64
2010 Donnelly MP, Paschou P, Grigorenko E, Gurwitz D, Mehdi SQ, Kajuna SL, Barta C, Kungulilo S, Karoma NJ, Lu RB, Zhukova OV, Kim JJ, Comas D, Siniscalco M, New M, ... ... Kidd JR, et al. The distribution and most recent common ancestor of the 17q21 inversion in humans. American Journal of Human Genetics. 86: 161-71. PMID 20116045 DOI: 10.1016/J.Ajhg.2010.01.007  0.64
2010 Pakstis AJ, Speed WC, Fang R, Hyland FC, Furtado MR, Kidd JR, Kidd KK. SNPs for a universal individual identification panel. Human Genetics. 127: 315-24. PMID 19937056 DOI: 10.1007/S00439-009-0771-1  0.64
2009 Li H, Cho K, Kidd JR, Kidd KK. Genetic landscape of Eurasia and "admixture" in Uyghurs. American Journal of Human Genetics. 85: 934-7; author reply . PMID 20004770 DOI: 10.1016/J.Ajhg.2009.10.024  0.64
2009 Barreiro LB, Ben-Ali M, Quach H, Laval G, Patin E, Pickrell JK, Bouchier C, Tichit M, Neyrolles O, Gicquel B, Kidd JR, Kidd KK, Alcaïs A, Ragimbeau J, Pellegrini S, et al. Evolutionary dynamics of human Toll-like receptors and their different contributions to host defense. Plos Genetics. 5: e1000562. PMID 19609346 DOI: 10.1371/Journal.Pgen.1000562  0.64
2009 Li H, Borinskaya S, Yoshimura K, Kal'ina N, Marusin A, Stepanov VA, Qin Z, Khaliq S, Lee MY, Yang Y, Mohyuddin A, Gurwitz D, Mehdi SQ, Rogaev E, Jin L, ... ... Kidd JR, et al. Refined geographic distribution of the oriental ALDH2*504Lys (nee 487Lys) variant. Annals of Human Genetics. 73: 335-45. PMID 19456322 DOI: 10.1111/J.1469-1809.2009.00517.X  0.64
2009 Patin E, Laval G, Barreiro LB, Salas A, Semino O, Santachiara-Benerecetti S, Kidd KK, Kidd JR, Van der Veen L, Hombert JM, Gessain A, Froment A, Bahuchet S, Heyer E, Quintana-Murci L. Inferring the demographic history of African farmers and pygmy hunter-gatherers using a multilocus resequencing data set. Plos Genetics. 5: e1000448. PMID 19360089 DOI: 10.1371/Journal.Pgen.1000448  0.64
2009 Quach H, Barreiro LB, Laval G, Zidane N, Patin E, Kidd KK, Kidd JR, Bouchier C, Veuille M, Antoniewski C, Quintana-Murci L. Signatures of purifying and local positive selection in human miRNAs. American Journal of Human Genetics. 84: 316-27. PMID 19232555 DOI: 10.1016/J.Ajhg.2009.01.022  0.64
2009 Yamtich J, Speed WC, Straka E, Kidd JR, Sweasy JB, Kidd KK. Population-specific variation in haplotype composition and heterozygosity at the POLB locus. Dna Repair. 8: 579-84. PMID 19167932 DOI: 10.1016/J.Dnarep.2008.12.005  0.64
2008 Ciarleglio CM, Ryckman KK, Servick SV, Hida A, Robbins S, Wells N, Hicks J, Larson SA, Wiedermann JP, Carver K, Hamilton N, Kidd KK, Kidd JR, Smith JR, Friedlaender J, et al. Genetic differences in human circadian clock genes among worldwide populations. Journal of Biological Rhythms. 23: 330-40. PMID 18663240 DOI: 10.1177/0748730408320284  0.64
2008 Li H, Gu S, Cai X, Speed WC, Pakstis AJ, Golub EI, Kidd JR, Kidd KK. Ethnic related selection for an ADH Class I variant within East Asia. Plos One. 3: e1881. PMID 18382665 DOI: 10.1371/Journal.Pone.0001881  0.64
2008 Quintana-Murci L, Quach H, Harmant C, Luca F, Massonnet B, Patin E, Sica L, Mouguiama-Daouda P, Comas D, Tzur S, Balanovsky O, Kidd KK, Kidd JR, van der Veen L, Hombert JM, et al. Maternal traces of deep common ancestry and asymmetric gene flow between Pygmy hunter-gatherers and Bantu-speaking farmers. Proceedings of the National Academy of Sciences of the United States of America. 105: 1596-601. PMID 18216239 DOI: 10.1073/Pnas.0711467105  0.64
2008 Hayes JE, Bartoshuk LM, Kidd JR, Duffy VB. Supertasting and PROP bitterness depends on more than the TAS2R38 gene. Chemical Senses. 33: 255-65. PMID 18209019 DOI: 10.1093/chemse/bjm084  0.64
2008 Friedlaender JS, Friedlaender FR, Reed FA, Kidd KK, Kidd JR, Chambers GK, Lea RA, Loo JH, Koki G, Hodgson JA, Merriwether DA, Weber JL. The genetic structure of Pacific Islanders. Plos Genetics. 4: e19. PMID 18208337 DOI: 10.1371/Journal.Pgen.0040019  0.64
2008 Al-Kateb H, Boright AP, Mirea L, Xie X, Sutradhar R, Mowjoodi A, Bharaj B, Liu M, Bucksa JM, Arends VL, Steffes MW, Cleary PA, Sun W, Lachin JM, Thorner PS, ... ... Kidd JR, et al. Multiple superoxide dismutase 1/splicing factor serine alanine 15 variants are associated with the development and progression of diabetic nephropathy: the Diabetes Control and Complications Trial/Epidemiology of Diabetes Interventions and Complications Genetics study. Diabetes. 57: 218-28. PMID 17914031 DOI: 10.2337/Db07-1059  0.64
2007 Li H, Mukherjee N, Soundararajan U, Tarnok Z, Barta C, Khaliq S, Mohyuddin A, Kajuna SL, Mehdi SQ, Kidd JR, Kidd KK. Geographically separate increases in the frequency of the derived ADH1B*47His allele in eastern and western Asia. American Journal of Human Genetics. 81: 842-6. PMID 17847010 DOI: 10.1086/521201  0.64
2007 Single RM, Martin MP, Gao X, Meyer D, Yeager M, Kidd JR, Kidd KK, Carrington M. Global diversity and evidence for coevolution of KIR and HLA. Nature Genetics. 39: 1114-9. PMID 17694058 DOI: 10.1038/Ng2077  0.64
2007 Pakstis AJ, Speed WC, Kidd JR, Kidd KK. Candidate SNPs for a universal individual identification panel. Human Genetics. 121: 305-17. PMID 17333283 DOI: 10.1007/S00439-007-0342-2  0.64
2007 Nakamoto K, Kidd JR, Jenison RD, Klaassen CD, Wan YJ, Kidd KK, Zhong XB. Genotyping and haplotyping of CYP2C19 functional alleles on thin-film biosensor chips. Pharmacogenetics and Genomics. 17: 103-14. PMID 17301690 DOI: 10.1097/Fpc.0B013E32801152C2  0.64
2007 Han Y, Gu S, Oota H, Osier MV, Pakstis AJ, Speed WC, Kidd JR, Kidd KK. Evidence of positive selection on a class I ADH locus. American Journal of Human Genetics. 80: 441-56. PMID 17273965 DOI: 10.1086/512485  0.64
2007 Oota H, Dunn CW, Speed WC, Pakstis AJ, Palmatier MA, Kidd JR, Kidd KK. Conservative evolution in duplicated genes of the primate Class I ADH cluster. Gene. 392: 64-76. PMID 17204375 DOI: 10.1016/J.Gene.2006.11.008  0.64
2007 Gu S, Pakstis AJ, Li H, Speed WC, Kidd JR, Kidd KK. Significant variation in haplotype block structure but conservation in tagSNP patterns among global populations. European Journal of Human Genetics : Ejhg. 15: 302-12. PMID 17202997 DOI: 10.1038/Sj.Ejhg.5201751  0.64
2007 Paschou P, Mahoney MW, Javed A, Kidd JR, Pakstis AJ, Gu S, Kidd KK, Drineas P. Intra- and interpopulation genotype reconstruction from tagging SNPs. Genome Research. 17: 96-107. PMID 17151345 DOI: 10.1101/Gr.5741407  0.64
2006 Verdu P, Barreiro LB, Patin E, Gessain A, Cassar O, Kidd JR, Kidd KK, Behar DM, Froment A, Heyer E, Sica L, Casanova JL, Abel L, Quintana-Murci L. Evolutionary insights into the high worldwide prevalence of MBL2 deficiency alleles. Human Molecular Genetics. 15: 2650-8. PMID 16885193 DOI: 10.1093/Hmg/Ddl193  0.64
2006 Schulz LO, Bennett PH, Ravussin E, Kidd JR, Kidd KK, Esparza J, Valencia ME. Effects of traditional and western environments on prevalence of type 2 diabetes in Pima Indians in Mexico and the U.S. Diabetes Care. 29: 1866-71. PMID 16873794 DOI: 10.2337/Dc06-0138  0.64
2006 Kidd KK, Pakstis AJ, Speed WC, Grigorenko EL, Kajuna SL, Karoma NJ, Kungulilo S, Kim JJ, Lu RB, Odunsi A, Okonofua F, Parnas J, Schulz LO, Zhukova OV, Kidd JR. Developing a SNP panel for forensic identification of individuals. Forensic Science International. 164: 20-32. PMID 16360294 DOI: 10.1016/J.Forsciint.2005.11.017  0.64
2005 Rajeevan H, Cheung KH, Gadagkar R, Stein S, Soundararajan U, Kidd JR, Pakstis AJ, Miller PL, Kidd KK. ALFRED: an allele frequency database for microevolutionary studies. Evolutionary Bioinformatics Online. 1: 1-10. PMID 19325849 DOI: 10.4137/Ebo.S0  0.64
2005 Han Y, Oota H, Osier MV, Pakstis AJ, Speed WC, Odunsi A, Okonofua F, Kajuna SL, Karoma NJ, Kungulilo S, Grigorenko E, Zhukova OV, Bonne-Tamir B, Lu RB, Parnas J, ... ... Kidd JR, et al. Considerable haplotype diversity within the 23kb encompassing the ADH7 gene. Alcoholism, Clinical and Experimental Research. 29: 2091-100. PMID 16385178 DOI: 10.1097/01.Alc.0000191769.92667.04  0.64
2005 Kim JJ, Verdu P, Pakstis AJ, Speed WC, Kidd JR, Kidd KK. Use of autosomal loci for clustering individuals and populations of East Asian origin. Human Genetics. 117: 511-9. PMID 16028061 DOI: 10.1007/S00439-005-1334-8  0.64
2005 Sawyer SL, Mukherjee N, Pakstis AJ, Feuk L, Kidd JR, Brookes AJ, Kidd KK. Linkage disequilibrium patterns vary substantially among populations. European Journal of Human Genetics : Ejhg. 13: 677-86. PMID 15657612 DOI: 10.1038/Sj.Ejhg.5201368  0.64
2004 Duffy VB, Davidson AC, Kidd JR, Kidd KK, Speed WC, Pakstis AJ, Reed DR, Snyder DJ, Bartoshuk LM. Bitter receptor gene (TAS2R38), 6-n-propylthiouracil (PROP) bitterness and alcohol intake. Alcoholism, Clinical and Experimental Research. 28: 1629-37. PMID 15547448 DOI: 10.1097/01.Alc.0000145789.55183.D4  0.64
2004 Liu N, Sawyer SL, Mukherjee N, Pakstis AJ, Kidd JR, Kidd KK, Brookes AJ, Zhao H. Haplotype block structures show significant variation among populations. Genetic Epidemiology. 27: 385-400. PMID 15389924 DOI: 10.1002/Gepi.20026  0.64
2004 Oota H, Pakstis AJ, Bonne-Tamir B, Goldman D, Grigorenko E, Kajuna SL, Karoma NJ, Kungulilo S, Lu RB, Odunsi K, Okonofua F, Zhukova OV, Kidd JR, Kidd KK. The evolution and population genetics of the ALDH2 locus: random genetic drift, selection, and low levels of recombination. Annals of Human Genetics. 68: 93-109. PMID 15008789 DOI: 10.1046/J.1529-8817.2003.00060.X  0.64
2003 Chattopadhyay P, Pakstis AJ, Mukherjee N, Iyengar S, Odunsi A, Okonofua F, Bonne-Tamir B, Speed W, Kidd JR, Kidd KK. Global survey of haplotype frequencies and linkage disequilibrium at the RET locus. European Journal of Human Genetics : Ejhg. 11: 760-9. PMID 14512966 DOI: 10.1038/Sj.Ejhg.5201036  0.64
2003 Zhong XB, Reynolds R, Kidd JR, Kidd KK, Jenison R, Marlar RA, Ward DC. Single-nucleotide polymorphism genotyping on optical thin-film biosensor chips. Proceedings of the National Academy of Sciences of the United States of America. 100: 11559-64. PMID 12975525 DOI: 10.1073/Pnas.1934783100  0.64
2003 Yu N, Jensen-Seaman MI, Chemnick L, Kidd JR, Deinard AS, Ryder O, Kidd KK, Li WH. Low nucleotide diversity in chimpanzees and bonobos. Genetics. 164: 1511-8. PMID 12930756  0.64
2002 Osier MV, Pakstis AJ, Goldman D, Edenberg HJ, Kidd JR, Kidd KK. A proline-threonine substitution in codon 351 of ADH1C is common in Native Americans. Alcoholism, Clinical and Experimental Research. 26: 1759-63. PMID 12500098 DOI: 10.1111/J.1530-0277.2002.Tb02481.X  0.64
2002 DeMille MM, Kidd JR, Ruggeri V, Palmatier MA, Goldman D, Odunsi A, Okonofua F, Grigorenko E, Schulz LO, Bonne-Tamir B, Lu RB, Parnas J, Pakstis AJ, Kidd KK. Population variation in linkage disequilibrium across the COMT gene considering promoter region and coding region variation. Human Genetics. 111: 521-37. PMID 12436243 DOI: 10.1007/S00439-002-0809-0  0.64
2002 Osier MV, Cheung KH, Kidd JR, Pakstis AJ, Miller PL, Kidd KK. ALFRED: An allele frequency database for anthropology. American Journal of Physical Anthropology. 119: 77-83. PMID 12209575 DOI: 10.1002/Ajpa.10094  0.64
2002 Osier MV, Pakstis AJ, Soodyall H, Comas D, Goldman D, Odunsi A, Okonofua F, Parnas J, Schulz LO, Bertranpetit J, Bonne-Tamir B, Lu RB, Kidd JR, Kidd KK. A global perspective on genetic variation at the ADH genes reveals unusual patterns of linkage disequilibrium and diversity. American Journal of Human Genetics. 71: 84-99. PMID 12050823 DOI: 10.1086/341290  0.64
2002 Ding YC, Chi HC, Grady DL, Morishima A, Kidd JR, Kidd KK, Flodman P, Spence MA, Schuck S, Swanson JM, Zhang YP, Moyzis RK. Evidence of positive selection acting at the human dopamine receptor D4 gene locus. Proceedings of the National Academy of Sciences of the United States of America. 99: 309-14. PMID 11756666 DOI: 10.1073/Pnas.012464099  0.64
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