| Year |
Citation |
Score |
| 2023 |
Najle SR, Grau-Bové X, Elek A, Navarrete C, Cianferoni D, Chiva C, Cañas-Armenteros D, Mallabiabarrena A, Kamm K, Sabidó E, Gruber-Vodicka H, Schierwater B, Serrano L, Sebé-Pedrós A. Stepwise emergence of the neuronal gene expression program in early animal evolution. Cell. 186: 4676-4693.e29. PMID 37729907 DOI: 10.1016/j.cell.2023.08.027 |
0.766 |
|
| 2023 |
De Rop FV, Hulselmans G, Flerin C, Soler-Vila P, Rafels A, Christiaens V, González-Blas CB, Marchese D, Caratù G, Poovathingal S, Rozenblatt-Rosen O, Slyper M, Luo W, Muus C, Duarte F, et al. Systematic benchmarking of single-cell ATAC-sequencing protocols. Nature Biotechnology. PMID 37537502 DOI: 10.1038/s41587-023-01881-x |
0.759 |
|
| 2022 |
Grau-Bové X, Navarrete C, Chiva C, Pribasnig T, Antó M, Torruella G, Galindo LJ, Lang BF, Moreira D, López-Garcia P, Ruiz-Trillo I, Schleper C, Sabidó E, Sebé-Pedrós A. A phylogenetic and proteomic reconstruction of eukaryotic chromatin evolution. Nature Ecology & Evolution. PMID 35680998 DOI: 10.1038/s41559-022-01771-6 |
0.765 |
|
| 2021 |
Grau-Bové X, Sebé-Pedrós A. Orthology clusters from gene trees with Possvm. Molecular Biology and Evolution. PMID 34352080 DOI: 10.1093/molbev/msab234 |
0.72 |
|
| 2021 |
Tanay A, Sebé-Pedrós A. Evolutionary Cell Type Mapping with Single-Cell Genomics. Trends in Genetics : Tig. PMID 34020820 DOI: 10.1016/j.tig.2021.04.008 |
0.359 |
|
| 2021 |
Levy S, Elek A, Grau-Bové X, Menéndez-Bravo S, Iglesias M, Tanay A, Mass T, Sebé-Pedrós A. A stony coral cell atlas illuminates the molecular and cellular basis of coral symbiosis, calcification, and immunity. Cell. PMID 33945788 DOI: 10.1016/j.cell.2021.04.005 |
0.738 |
|
| 2020 |
Peligero-Cruz C, Givony T, Sebé-Pedrós A, Dobeš J, Kadouri N, Nevo S, Roncato F, Alon R, Goldfarb Y, Abramson J. IL18 signaling promotes homing of mature Tregs into the thymus. Elife. 9. PMID 32687059 DOI: 10.7554/Elife.58213 |
0.312 |
|
| 2020 |
Ku C, Sheyn U, Sebé-Pedrós A, Ben-Dor S, Schatz D, Tanay A, Rosenwasser S, Vardi A. A single-cell view on alga-virus interactions reveals sequential transcriptional programs and infection states. Science Advances. 6: eaba4137. PMID 32490206 DOI: 10.1126/Sciadv.Aba4137 |
0.393 |
|
| 2019 |
Ku C, Sebé-Pedrós A. Using single-cell transcriptomics to understand functional states and interactions in microbial eukaryotes. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 374: 20190098. PMID 31587645 DOI: 10.1098/Rstb.2019.0098 |
0.465 |
|
| 2019 |
de Mendoza A, Sebé-Pedrós A. Origin and evolution of eukaryotic transcription factors. Current Opinion in Genetics & Development. 58: 25-32. PMID 31466037 DOI: 10.1016/J.Gde.2019.07.010 |
0.489 |
|
| 2018 |
Torruella G, Grau-Bové X, Moreira D, Karpov SA, Burns JA, Sebé-Pedrós A, Völcker E, López-García P. Global transcriptome analysis of the aphelid supports the phagotrophic origin of fungi. Communications Biology. 1: 231. PMID 30588510 DOI: 10.1038/s42003-018-0235-z |
0.796 |
|
| 2018 |
Sebé-Pedrós A, Chomsky E, Pang K, Lara-Astiaso D, Gaiti F, Mukamel Z, Amit I, Hejnol A, Degnan BM, Tanay A. Early metazoan cell type diversity and the evolution of multicellular gene regulation. Nature Ecology & Evolution. PMID 29942020 DOI: 10.1038/S41559-018-0575-6 |
0.463 |
|
| 2018 |
Sebé-Pedrós A, Saudemont B, Chomsky E, Plessier F, Mailhé MP, Renno J, Loe-Mie Y, Lifshitz A, Mukamel Z, Schmutz S, Novault S, Steinmetz PRH, Spitz F, Tanay A, Marlow H. Cnidarian Cell Type Diversity and Regulation Revealed by Whole-Organism Single-Cell RNA-Seq. Cell. 173: 1520-1534.e20. PMID 29856957 DOI: 10.1016/J.Cell.2018.05.019 |
0.462 |
|
| 2018 |
Leonard G, Labarre A, Milner DS, Monier A, Soanes D, Wideman JG, Maguire F, Stevens S, Sain D, Grau-Bové X, Sebé-Pedrós A, Stajich JE, Paszkiewicz K, Brown MW, Hall N, et al. Comparative genomic analysis of the 'pseudofungus' Hyphochytrium catenoides. Open Biology. 8. PMID 29321239 DOI: 10.1098/Rsob.170184 |
0.776 |
|
| 2017 |
Sebé-Pedrós A, Degnan BM, Ruiz-Trillo I. The origin of Metazoa: a unicellular perspective. Nature Reviews. Genetics. PMID 28479598 DOI: 10.1038/Nrg.2017.21 |
0.767 |
|
| 2017 |
Sebé-Pedrós A, Ruiz-Trillo I. Evolution and Classification of the T-Box Transcription Factor Family. Current Topics in Developmental Biology. 122: 1-26. PMID 28057261 DOI: 10.1016/Bs.Ctdb.2016.06.004 |
0.751 |
|
| 2016 |
Sebé-Pedrós A, Peña MI, Capella-Gutiérrez S, Antó M, Gabaldón T, Ruiz-Trillo I, Sabidó E. High-Throughput Proteomics Reveals the Unicellular Roots of Animal Phosphosignaling and Cell Differentiation. Developmental Cell. PMID 27746046 DOI: 10.1016/J.Devcel.2016.09.019 |
0.783 |
|
| 2016 |
Sebé-Pedrós A, Ballaré C, Parra-Acero H, Chiva C, Tena JJ, Sabidó E, Gómez-Skarmeta JL, Di Croce L, Ruiz-Trillo I. The Dynamic Regulatory Genome of Capsaspora and the Origin of Animal Multicellularity. Cell. 165: 1224-37. PMID 27114036 DOI: 10.1016/J.Cell.2016.03.034 |
0.774 |
|
| 2015 |
Alzayady KJ, Sebé-Pedrós A, Chandrasekhar R, Wang L, Ruiz-Trillo I, Yule DI. Tracing the Evolutionary History of Inositol, 1, 4, 5-Trisphosphate Receptor: Insights from Analyses of Capsaspora owczarzaki Ca2+ Release Channel Orthologs. Molecular Biology and Evolution. PMID 25911230 DOI: 10.1093/Molbev/Msv098 |
0.724 |
|
| 2015 |
Grau-Bové X, Sebé-Pedrós A, Ruiz-Trillo I. The eukaryotic ancestor had a complex ubiquitin signaling system of archaeal origin. Molecular Biology and Evolution. 32: 726-39. PMID 25525215 DOI: 10.1093/Molbev/Msu334 |
0.803 |
|
| 2014 |
de Mendoza A, Sebé-Pedrós A, Ruiz-Trillo I. The evolution of the GPCR signaling system in eukaryotes: modularity, conservation, and the transition to metazoan multicellularity. Genome Biology and Evolution. 6: 606-19. PMID 24567306 DOI: 10.1093/Gbe/Evu038 |
0.744 |
|
| 2014 |
Sebé-Pedrós A, Grau-Bové X, Richards TA, Ruiz-Trillo I. Evolution and classification of myosins, a paneukaryotic whole-genome approach. Genome Biology and Evolution. 6: 290-305. PMID 24443438 DOI: 10.1093/Gbe/Evu013 |
0.81 |
|
| 2013 |
Sebé-Pedrós A, Irimia M, Del Campo J, Parra-Acero H, Russ C, Nusbaum C, Blencowe BJ, Ruiz-Trillo I. Regulated aggregative multicellularity in a close unicellular relative of metazoa. Elife. 2: e01287. PMID 24368732 DOI: 10.7554/Elife.01287 |
0.755 |
|
| 2013 |
de Mendoza A, Sebé-Pedrós A, Šestak MS, Matejcic M, Torruella G, Domazet-Loso T, Ruiz-Trillo I. Transcription factor evolution in eukaryotes and the assembly of the regulatory toolkit in multicellular lineages. Proceedings of the National Academy of Sciences of the United States of America. 110: E4858-66. PMID 24277850 DOI: 10.1073/Pnas.1311818110 |
0.798 |
|
| 2013 |
Sebé-Pedrós A, Ariza-Cosano A, Weirauch MT, Leininger S, Yang A, Torruella G, Adamski M, Adamska M, Hughes TR, Gómez-Skarmeta JL, Ruiz-Trillo I. Early evolution of the T-box transcription factor family. Proceedings of the National Academy of Sciences of the United States of America. 110: 16050-5. PMID 24043797 DOI: 10.1073/Pnas.1309748110 |
0.763 |
|
| 2013 |
Sebé-Pedrós A, Burkhardt P, Sánchez-Pons N, Fairclough SR, Lang BF, King N, Ruiz-Trillo I. Insights into the origin of metazoan filopodia and microvilli. Molecular Biology and Evolution. 30: 2013-23. PMID 23770652 DOI: 10.1093/Molbev/Mst110 |
0.774 |
|
| 2013 |
Grau-Bové X, Sebé-Pedrós A, Ruiz-Trillo I. A genomic survey of HECT ubiquitin ligases in eukaryotes reveals independent expansions of the HECT system in several lineages. Genome Biology and Evolution. 5: 833-47. PMID 23563970 DOI: 10.1093/Gbe/Evt052 |
0.802 |
|
| 2013 |
Sebé-Pedrós A, Irimia M, Campo Jd, Parra-Acero H, Russ C, Nusbaum C, Blencowe BJ, Ruiz-Trillo I. Author response: Regulated aggregative multicellularity in a close unicellular relative of metazoa Elife. DOI: 10.7554/Elife.01287.022 |
0.711 |
|
| 2012 |
Sebé-Pedrós A, Zheng Y, Ruiz-Trillo I, Pan D. Premetazoan origin of the hippo signaling pathway. Cell Reports. 1: 13-20. PMID 22832104 DOI: 10.1016/J.Celrep.2011.11.004 |
0.761 |
|
| 2010 |
Sebé-Pedrós A, Ruiz-Trillo I. Integrin-mediated adhesion complex: Cooption of signaling systems at the dawn of Metazoa. Communicative & Integrative Biology. 3: 475-7. PMID 21057645 DOI: 10.4161/Cib.3.5.12603 |
0.751 |
|
| 2010 |
Sebé-Pedrós A, Roger AJ, Lang FB, King N, Ruiz-Trillo I. Ancient origin of the integrin-mediated adhesion and signaling machinery. Proceedings of the National Academy of Sciences of the United States of America. 107: 10142-7. PMID 20479219 DOI: 10.1073/Pnas.1002257107 |
0.808 |
|
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