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Li Ma - Publications

Affiliations: 
2010-2014 Biology University of Maryland, College Park, College Park, MD 
 2014-2015 Bell Center for Regenerative Biology and Tissue Engineering Marine Biological Laboratory, Falmouth, MA, United States 
Area:
Astyanax cavefish, eye development, pigment development
Website:
http://www.life.umd.edu/labs/jeffery/Staff/staff.html
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26 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Jeffery WR, Ma L, Zhao YH. Cavefish as biological models in the laboratory and in the wild. Zoological Research. 44: 834-836. PMID 37464940 DOI: 10.24272/j.issn.2095-8137.2023.186  0.414
2023 Jeffery WR, Li B, Ng M, Li L, Gorički Š, Ma L. Differentially expressed chaperone genes reveal a stress response required for unidirectional regeneration in the basal chordate Ciona. Bmc Biology. 21: 148. PMID 37365564 DOI: 10.1186/s12915-023-01633-y  0.699
2023 Ma L, Yang JX, Lei FK, Xu MZ, Zhao YH, Jeffery WR. Protection and exploration of the scientific potential of Chinese cavefish. Zoological Research. 44: 675-677. PMID 37313846 DOI: 10.24272/j.issn.2095-8137.2022.484  0.421
2021 Ma L, Ng M, Shi J, Gore AV, Castranova D, Weinstein BM, Jeffery WR. Publisher Correction: Maternal control of visceral asymmetry evolution in Astyanax cavefish. Scientific Reports. 11: 12934. PMID 34131272 DOI: 10.1038/s41598-021-92148-5  0.456
2021 Ma L, Ng M, Shi J, Gore AV, Castranova D, Weinstein BM, Jeffery WR. Maternal control of visceral asymmetry evolution in Astyanax cavefish. Scientific Reports. 11: 10312. PMID 33986376 DOI: 10.1038/s41598-021-89702-6  0.487
2021 Ma L, Dessiatoun R, Shi J, Jeffery WR. Incremental Temperature Changes for Maximal Breeding and Spawning in Astyanax mexicanus. Journal of Visualized Experiments : Jove. PMID 33645574 DOI: 10.3791/61708  0.507
2020 Ma L, Gore AV, Castranova D, Shi J, Ng M, Tomins KA, van der Weele CM, Weinstein BM, Jeffery WR. Author Correction: A hypomorphic cystathionine ß-synthase gene contributes to cavefish eye loss by disrupting optic vasculature. Nature Communications. 11: 5458. PMID 33093486 DOI: 10.1038/s41467-020-19340-5  0.752
2020 Liu S, Yu Y, Zhang S, Cole JB, Tenesa A, Wang T, McDaneld TG, Ma L, Liu GE, Fang L. Epigenomics and genotype-phenotype association analyses reveal conserved genetic architecture of complex traits in cattle and human. Bmc Biology. 18: 80. PMID 32620158 DOI: 10.1186/S12915-020-00792-6  0.32
2020 Ma L, Gore AV, Castranova D, Shi J, Ng M, Tomins KA, van der Weele CM, Weinstein BM, Jeffery WR. A hypomorphic cystathionine ß-synthase gene contributes to cavefish eye loss by disrupting optic vasculature. Nature Communications. 11: 2772. PMID 32487986 DOI: 10.1038/S41467-020-16497-X  0.767
2020 Fang L, Cai W, Liu S, Canela-Xandri O, Gao Y, Jiang J, Rawlik K, Li B, Schroeder SG, Rosen BD, Li CJ, Sonstegard TS, Alexander LJ, Van Tassell CP, VanRaden PM, ... ... Ma L, et al. Comprehensive analyses of 723 transcriptomes enhance genetic and biological interpretations for complex traits in cattle. Genome Research. PMID 32424068 DOI: 10.1101/Gr.250704.119  0.322
2020 Ma L, Ng M, van der Weele CM, Yoshizawa M, Jeffery WR. Dual roles of the retinal pigment epithelium and lens in cavefish eye degeneration. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. PMID 31930686 DOI: 10.1002/Jez.B.22923  0.74
2019 Fang L, Liu S, Liu M, Kang X, Lin S, Li B, Connor EE, Baldwin RL, Tenesa A, Ma L, Liu GE, Li CJ. Functional annotation of the cattle genome through systematic discovery and characterization of chromatin states and butyrate-induced variations. Bmc Biology. 17: 68. PMID 31419979 DOI: 10.1186/S12915-019-0687-8  0.306
2019 Fang L, Zhou Y, Liu S, Jiang J, Bickhart DM, Null DJ, Li B, Schroeder SG, Rosen BD, Cole JB, Van Tassell CP, Ma L, Liu GE. Comparative analyses of sperm DNA methylomes among human, mouse and cattle provide insights into epigenomic evolution and complex traits. Epigenetics. PMID 30810461 DOI: 10.1080/15592294.2019.1582217  0.324
2018 Santos DJA, Cole JB, Null DJ, Byrem TM, Ma L. Genetic and nongenetic profiling of milk pregnancy-associated glycoproteins in Holstein cattle. Journal of Dairy Science. PMID 30219417 DOI: 10.3168/Jds.2018-14682  0.301
2018 Ma L, Strickler AG, Parkhurst A, Yoshizawa M, Shi J, Jeffery WR. Maternal Genetic Effects in Astyanax Cavefish Development. Developmental Biology. PMID 30031754 DOI: 10.1016/J.Ydbio.2018.07.014  0.755
2018 Gore AV, Tomins KA, Iben J, Ma L, Castranova D, Davis AE, Parkhurst A, Jeffery WR, Weinstein BM. An epigenetic mechanism for cavefish eye degeneration. Nature Ecology & Evolution. PMID 29807993 DOI: 10.1038/S41559-018-0569-4  0.655
2018 Bilandžija H, Abraham L, Ma L, Renner KJ, Jeffery WR. Behavioural changes controlled by catecholaminergic systems explain recurrent loss of pigmentation in cavefish. Proceedings. Biological Sciences. 285. PMID 29720416 DOI: 10.1098/Rspb.2018.0243  0.746
2017 Gross JB, Weagley J, Stahl BA, Ma L, Espinasa L, McGaugh SE. A local duplication of the Melanocortin receptor 1 locus in Astyanax. Genome. PMID 28738163 DOI: 10.1139/Gen-2017-0049  0.635
2016 Kowalko JE, Ma L, Jeffery WR. Genome Editing in Astyanax mexicanus Using Transcription Activator-like Effector Nucleases (TALENs). Journal of Visualized Experiments : Jove. PMID 27404092 DOI: 10.3791/54113  0.611
2015 Ma L, Jeffery WR, Essner JJ, Kowalko JE. Genome editing using TALENs in blind Mexican Cavefish, Astyanax mexicanus. Plos One. 10: e0119370. PMID 25774757 DOI: 10.1371/Journal.Pone.0119370  0.62
2014 McGaugh SE, Gross JB, Aken B, Blin M, Borowsky R, Chalopin D, Hinaux H, Jeffery WR, Keene A, Ma L, Minx P, Murphy D, O'Quin KE, Rétaux S, Rohner N, et al. The cavefish genome reveals candidate genes for eye loss. Nature Communications. 5: 5307. PMID 25329095 DOI: 10.1038/Ncomms6307  0.763
2014 Ma L, Parkhurst A, Jeffery WR. The role of a lens survival pathway including sox2 and αA-crystallin in the evolution of cavefish eye degeneration. Evodevo. 5: 28. PMID 25210614 DOI: 10.1186/2041-9139-5-28  0.683
2014 Ma L, Jeffery WR. Eye development (vertebrate) Access Science. DOI: 10.1036/1097-8542.Yb150966  0.622
2013 Bilandžija H, Ma L, Parkhurst A, Jeffery WR. A potential benefit of albinism in Astyanax cavefish: downregulation of the oca2 gene increases tyrosine and catecholamine levels as an alternative to melanin synthesis. Plos One. 8: e80823. PMID 24282555 DOI: 10.1371/Journal.Pone.0080823  0.585
2008 Ma L, Pan XF, Wei YH, Li ZY, Li CC, Yang JX, Mao BY. Embryonic stages and eye-specific gene expression of the local cyprinoid fish Anabarilius grahami in Fuxian Lake, China Journal of Fish Biology. 73: 1946-1959. DOI: 10.1111/J.1095-8649.2008.01998.X  0.398
2006 Sayer JA, Otto EA, O'Toole JF, Nurnberg G, Kennedy MA, Becker C, Hennies HC, Helou J, Attanasio M, Fausett BV, Utsch B, Khanna H, Liu Y, Drummond I, Kawakami I, ... ... Ma L, et al. The centrosomal protein nephrocystin-6 is mutated in Joubert syndrome and activates transcription factor ATF4. Nature Genetics. 38: 674-81. PMID 16682973 DOI: 10.1038/Ng1786  0.474
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