| Year |
Citation |
Score |
| 2023 |
Han Z, Moore GA, Mitter R, Lopez Martinez D, Wan L, Dirac Svejstrup AB, Rueda DS, Svejstrup JQ. DNA-directed termination of RNA polymerase II transcription. Molecular Cell. 83: 3253-3267.e7. PMID 37683646 DOI: 10.1016/j.molcel.2023.08.007 |
0.47 |
|
| 2023 |
Nieto Moreno N, Olthof AM, Svejstrup JQ. Transcription-Coupled Nucleotide Excision Repair and the Transcriptional Response to UV-Induced DNA Damage. Annual Review of Biochemistry. PMID 37040775 DOI: 10.1146/annurev-biochem-052621-091205 |
0.41 |
|
| 2022 |
Gregersen LH, Mitter R, Svejstrup JQ. Elongation factor-specific capture of RNA polymerase II complexes. Cell Reports Methods. 2: 100368. PMID 36590686 DOI: 10.1016/j.crmeth.2022.100368 |
0.424 |
|
| 2022 |
Lehner MH, Walker J, Temcinaite K, Herlihy A, Taschner M, Berger AC, Corbett AH, Dirac Svejstrup AB, Svejstrup JQ. Yeast Smy2 and its human homologs GIGYF1 and -2 regulate Cdc48/VCP function during transcription stress. Cell Reports. 41: 111536. PMID 36288698 DOI: 10.1016/j.celrep.2022.111536 |
0.361 |
|
| 2022 |
Herlihy AE, Boeing S, Weems JC, Walker J, Dirac-Svejstrup AB, Lehner MH, Conaway RC, Conaway JW, Svejstrup JQ. UBAP2/UBAP2L regulate UV-induced ubiquitylation of RNA polymerase II and are the human orthologues of yeast Def1. Dna Repair. 115: 103343. PMID 35633597 DOI: 10.1016/j.dnarep.2022.103343 |
0.742 |
|
| 2022 |
Cugusi S, Mitter R, Kelly GP, Walker J, Han Z, Pisano P, Wierer M, Stewart A, Svejstrup JQ. Heat shock induces premature transcript termination and reconfigures the human transcriptome. Molecular Cell. PMID 35114099 DOI: 10.1016/j.molcel.2022.01.007 |
0.376 |
|
| 2021 |
Gaul L, Svejstrup JQ. Transcription-coupled repair and the transcriptional response to UV-Irradiation. Dna Repair. 107: 103208. PMID 34416541 DOI: 10.1016/j.dnarep.2021.103208 |
0.432 |
|
| 2021 |
Wan L, Juszkiewicz S, Blears D, Bajpe PK, Han Z, Faull P, Mitter R, Stewart A, Snijders AP, Hegde RS, Svejstrup JQ. Translation stress and collided ribosomes are co-activators of cGAS. Molecular Cell. PMID 34111399 DOI: 10.1016/j.molcel.2021.05.018 |
0.316 |
|
| 2021 |
Geijer ME, Zhou D, Selvam K, Steurer B, Mukherjee C, Evers B, Cugusi S, van Toorn M, van der Woude M, Janssens RC, Kok YP, Gong W, Raams A, Lo CSY, Lebbink JHG, ... ... Svejstrup JQ, et al. Elongation factor ELOF1 drives transcription-coupled repair and prevents genome instability. Nature Cell Biology. 23: 608-619. PMID 34108662 DOI: 10.1038/s41556-021-00692-z |
0.457 |
|
| 2020 |
Noe Gonzalez M, Blears D, Svejstrup JQ. Causes and consequences of RNA polymerase II stalling during transcript elongation. Nature Reviews. Molecular Cell Biology. PMID 33208928 DOI: 10.1038/s41580-020-00308-8 |
0.785 |
|
| 2020 |
Fan Z, Devlin JR, Hogg SJ, Doyle MA, Harrison PF, Todorovski I, Cluse LA, Knight DA, Sandow JJ, Gregory G, Fox A, Beilharz TH, Kwiatkowski N, Scott NE, Vidakovic AT, ... ... Svejstrup JQ, et al. CDK13 cooperates with CDK12 to control global RNA polymerase II processivity. Science Advances. 6. PMID 32917631 DOI: 10.1126/Sciadv.Aaz5041 |
0.502 |
|
| 2020 |
Juszkiewicz S, Speldewinde SH, Wan L, Svejstrup JQ, Hegde RS. The ASC-1 Complex Disassembles Collided Ribosomes. Molecular Cell. PMID 32579943 DOI: 10.1016/J.Molcel.2020.06.006 |
0.395 |
|
| 2020 |
Rodríguez-Martínez M, Boissiére T, Gonzalez MN, Litchfield K, Mitter R, Walker J, Kjœr S, Ismail M, Downward J, Swanton C, Svejstrup JQ. Evidence That STK19 Is Not an NRAS-dependent Melanoma Driver. Cell. 181: 1395-1405.e11. PMID 32531245 DOI: 10.1016/J.Cell.2020.04.014 |
0.3 |
|
| 2020 |
Dirac-Svejstrup AB, Walker J, Faull P, Encheva V, Akimov V, Puglia M, Perkins D, Kümper S, Hunjan SS, Blagoev B, Snijders AP, Powell DJ, Svejstrup JQ. DDI2 Is a Ubiquitin-Directed Endoprotease Responsible for Cleavage of Transcription Factor NRF1. Molecular Cell. PMID 32521225 DOI: 10.1016/J.Molcel.2020.05.035 |
0.413 |
|
| 2020 |
Fan Z, Devlin JR, Hogg SJ, Doyle MA, Harrison PF, Todorovski I, Cluse LA, Knight DA, Sandow JJ, Gregory G, Fox A, Beilharz TH, Kwiatkowski N, Scott NE, Vidakovic AT, ... ... Svejstrup JQ, et al. CDK13 cooperates with CDK12 to control global RNA polymerase II processivity. Science Advances. 6: eaaz5041. PMID 32494677 DOI: 10.1126/sciadv.aaz5041 |
0.408 |
|
| 2020 |
Tufegdžić Vidaković A, Mitter R, Kelly GP, Neumann M, Harreman M, Rodríguez-Martínez M, Herlihy A, Weems JC, Boeing S, Encheva V, Gaul L, Milligan L, Tollervey D, Conaway RC, Conaway JW, ... ... Svejstrup JQ, et al. Regulation of the RNAPII Pool Is Integral to the DNA Damage Response. Cell. PMID 32142654 DOI: 10.1016/J.Cell.2020.02.009 |
0.746 |
|
| 2020 |
Gregersen LH, Mitter R, Svejstrup JQ. Using TT-seq for profiling nascent transcription and measuring transcript elongation. Nature Protocols. PMID 31915390 DOI: 10.1038/S41596-019-0262-3 |
0.491 |
|
| 2019 |
Noe Gonzalez M, Svejstrup JQ. Watch Out for Those Terrible Twos! Dinucleotide Accumulation Dysregulates Mitochondrial Transcription. Molecular Cell. 76: 696-698. PMID 31809742 DOI: 10.1016/J.Molcel.2019.11.002 |
0.751 |
|
| 2019 |
Zatreanu D, Han Z, Mitter R, Tumini E, Williams H, Gregersen L, Dirac-Svejstrup AB, Roma S, Stewart A, Aguilera A, Svejstrup JQ. Elongation Factor TFIIS Prevents Transcription Stress and R-Loop Accumulation to Maintain Genome Stability. Molecular Cell. PMID 31519522 DOI: 10.1016/J.Molcel.2019.07.037 |
0.437 |
|
| 2019 |
Gregersen LH, Mitter R, Ugalde AP, Nojima T, Proudfoot NJ, Agami R, Stewart A, Svejstrup JQ. SCAF4 and SCAF8, mRNA Anti-Terminator Proteins. Cell. PMID 31104839 DOI: 10.1016/J.Cell.2019.04.038 |
0.369 |
|
| 2019 |
Cakiroglu A, Clapier CR, Ehrensberger AH, Darbo E, Cairns BR, Luscombe NM, Svejstrup J. Genome-wide reconstitution of chromatin transactions reveals that RSC preferentially disrupts H2A.Z-containing nucleosomes. Genome Research. PMID 31097474 DOI: 10.1101/Gr.243139.118 |
0.347 |
|
| 2019 |
Vidakovic AT, Harreman M, Dirac-Svejstrup AB, Boeing S, Roy A, Encheva V, Neumann M, Wilson M, Snijders AP, Svejstrup JQ. Analysis of RNA polymerase II ubiquitylation and proteasomal degradation. Methods (San Diego, Calif.). PMID 30769100 DOI: 10.1016/J.Ymeth.2019.02.005 |
0.569 |
|
| 2018 |
Gregersen LH, Svejstrup JQ. The Cellular Response to Transcription-Blocking DNA Damage. Trends in Biochemical Sciences. 43: 327-341. PMID 29699641 DOI: 10.1016/J.Tibs.2018.02.010 |
0.484 |
|
| 2017 |
Weems JC, Slaughter BD, Unruh JR, Boeing S, Hall SM, McLaird MB, Yasukawa T, Aso T, Svejstrup JQ, Conaway JW, Conaway RC. Cockayne Syndrome B Protein Regulates Recruitment of the Elongin A Ubiquitin Ligase to Sites of DNA Damage. The Journal of Biological Chemistry. PMID 28292928 DOI: 10.1074/Jbc.C117.777946 |
0.741 |
|
| 2017 |
Williamson L, Saponaro M, Boeing S, East P, Mitter R, Kantidakis T, Kelly GP, Lobley A, Walker J, Spencer-Dene B, Howell M, Stewart A, Svejstrup JQ. UV Irradiation Induces a Non-coding RNA that Functionally Opposes the Protein Encoded by the Same Gene. Cell. PMID 28215706 DOI: 10.1016/J.Cell.2017.01.019 |
0.491 |
|
| 2016 |
Boeing S, Williamson L, Encheva V, Gori I, Saunders RE, Instrell R, Aygün O, Rodriguez-Martinez M, Weems JC, Kelly GP, Conaway JW, Conaway RC, Stewart A, Howell M, Snijders AP, ... Svejstrup JQ, et al. Multiomic Analysis of the UV-Induced DNA Damage Response. Cell Reports. PMID 27184836 DOI: 10.1016/J.Celrep.2016.04.047 |
0.696 |
|
| 2016 |
Ranes M, Boeing S, Wang Y, Wienholz F, Menoni H, Walker J, Encheva V, Chakravarty P, Mari PO, Stewart A, Giglia-Mari G, Snijders A, Vermeulen W, Svejstrup JQ. A ubiquitylation site in Cockayne syndrome B required for repair of oxidative DNA damage, but not for transcription-coupled nucleotide excision repair. Nucleic Acids Research. PMID 27060134 DOI: 10.1093/Nar/Gkw216 |
0.429 |
|
| 2016 |
Kantidakis T, Saponaro M, Mitter R, Horswell S, Kranz A, Boeing S, Aygün O, Kelly GP, Matthews N, Stewart A, Stewart AF, Svejstrup JQ. Mutation of cancer driver MLL2 results in transcription stress and genome instability. Genes & Development. 30: 408-20. PMID 26883360 DOI: 10.1101/Gad.275453.115 |
0.383 |
|
| 2015 |
Ehrensberger AH, Franchini DM, East P, George R, Matthews N, Maslen SL, Svejstrup JQ. Retention of the Native Epigenome in Purified Mammalian Chromatin. Plos One. 10: e0133246. PMID 26248330 DOI: 10.1371/Journal.Pone.0133246 |
0.349 |
|
| 2014 |
Wang Y, Chakravarty P, Ranes M, Kelly G, Brooks PJ, Neilan E, Stewart A, Schiavo G, Svejstrup JQ. Dysregulation of gene expression as a cause of Cockayne syndrome neurological disease. Proceedings of the National Academy of Sciences of the United States of America. 111: 14454-9. PMID 25249633 DOI: 10.1073/Pnas.1412569111 |
0.317 |
|
| 2014 |
Saponaro M, Kantidakis T, Mitter R, Kelly GP, Heron M, Williams H, Söding J, Stewart A, Svejstrup JQ. RECQL5 controls transcript elongation and suppresses genome instability associated with transcription stress. Cell. 157: 1037-49. PMID 24836610 DOI: 10.1016/J.Cell.2014.03.048 |
0.422 |
|
| 2013 |
Wilson MD, Harreman M, Taschner M, Reid J, Walker J, Erdjument-Bromage H, Tempst P, Svejstrup JQ. Proteasome-mediated processing of Def1, a critical step in the cellular response to transcription stress. Cell. 154: 983-95. PMID 23993092 DOI: 10.1016/J.Cell.2013.07.028 |
0.494 |
|
| 2013 |
Ehrensberger AH, Kelly GP, Svejstrup JQ. Mechanistic interpretation of promoter-proximal peaks and RNAPII density maps. Cell. 154: 713-5. PMID 23953103 DOI: 10.1016/J.Cell.2013.07.032 |
0.401 |
|
| 2013 |
Svejstrup JQ. Synovial sarcoma mechanisms: a series of unfortunate events. Cell. 153: 11-2. PMID 23540685 DOI: 10.1016/J.Cell.2013.03.015 |
0.348 |
|
| 2013 |
Svejstrup JQ. RNA polymerase II transcript elongation. Biochimica Et Biophysica Acta. 1829: 1. PMID 23312801 DOI: 10.1016/J.Bbagrm.2012.12.008 |
0.552 |
|
| 2013 |
Wilson MD, Harreman M, Svejstrup JQ. Ubiquitylation and degradation of elongating RNA polymerase II: The last resort Biochimica Et Biophysica Acta - Gene Regulatory Mechanisms. 1829: 151-157. PMID 22960598 DOI: 10.1016/J.Bbagrm.2012.08.002 |
0.618 |
|
| 2012 |
Wilson MD, Saponaro M, Leidl MA, Svejstrup JQ. MultiDsk: a ubiquitin-specific affinity resin. Plos One. 7: e46398. PMID 23056298 DOI: 10.1371/Journal.Pone.0046398 |
0.439 |
|
| 2012 |
Hobson DJ, Wei W, Steinmetz LM, Svejstrup JQ. RNA polymerase II collision interrupts convergent transcription. Molecular Cell. 48: 365-74. PMID 23041286 DOI: 10.1016/J.Molcel.2012.08.027 |
0.528 |
|
| 2012 |
Close P, Gillard M, Ladang A, Jiang Z, Papuga J, Hawkes N, Nguyen L, Chapelle JP, Bouillenne F, Svejstrup J, Fillet M, Chariot A. DERP6 (ELP5) and C3ORF75 (ELP6) regulate tumorigenicity and migration of melanoma cells as subunits of Elongator. The Journal of Biological Chemistry. 287: 32535-45. PMID 22854966 DOI: 10.1074/Jbc.M112.402727 |
0.402 |
|
| 2012 |
Svejstrup JQ. Transcription: another mark in the tail. The Embo Journal. 31: 2753-4. PMID 22617426 DOI: 10.1038/Emboj.2012.154 |
0.487 |
|
| 2012 |
Close P, East P, Dirac-Svejstrup AB, Hartmann H, Heron M, Maslen S, Chariot A, Söding J, Skehel M, Svejstrup JQ. DBIRD complex integrates alternative mRNA splicing with RNA polymerase II transcript elongation. Nature. 484: 386-9. PMID 22446626 DOI: 10.1038/Nature10925 |
0.577 |
|
| 2011 |
Selth LA, Close P, Svejstrup JQ. Studying RNA-protein interactions in vivo by RNA immunoprecipitation. Methods in Molecular Biology (Clifton, N.J.). 791: 253-64. PMID 21913085 DOI: 10.1007/978-1-61779-316-5_19 |
0.496 |
|
| 2011 |
Staresincic L, Walker J, Dirac-Svejstrup AB, Mitter R, Svejstrup JQ. GTP-dependent binding and nuclear transport of RNA polymerase II by Npa3 protein. The Journal of Biological Chemistry. 286: 35553-61. PMID 21844196 DOI: 10.1074/Jbc.M111.286161 |
0.46 |
|
| 2011 |
Walker J, Kwon SY, Badenhorst P, East P, McNeill H, Svejstrup JQ. Role of elongator subunit Elp3 in Drosophila melanogaster larval development and immunity. Genetics. 187: 1067-75. PMID 21288872 DOI: 10.1534/Genetics.110.123893 |
0.374 |
|
| 2010 |
Ertel F, Dirac-Svejstrup AB, Hertel CB, Blaschke D, Svejstrup JQ, Korber P. In vitro reconstitution of PHO5 promoter chromatin remodeling points to a role for activator-nucleosome competition in vivo Molecular and Cellular Biology. 30: 4060-4076. PMID 20566699 DOI: 10.1128/Mcb.01399-09 |
0.404 |
|
| 2010 |
Anindya R, Mari PO, Kristensen U, Kool H, Giglia-Mari G, Mullenders LH, Fousteri M, Vermeulen W, Egly JM, Svejstrup JQ. A ubiquitin-binding domain in Cockayne syndrome B required for transcription-coupled nucleotide excision repair. Molecular Cell. 38: 637-48. PMID 20541997 DOI: 10.1016/J.Molcel.2010.04.017 |
0.486 |
|
| 2010 |
Sigurdsson S, Dirac-Svejstrup AB, Svejstrup JQ. Evidence that Transcript Cleavage Is Essential for RNA Polymerase II Transcription and Cell Viability Molecular Cell. 38: 202-210. PMID 20417599 DOI: 10.1016/J.Molcel.2010.02.026 |
0.548 |
|
| 2010 |
Selth LA, Sigurdsson S, Svejstrup JQ. Transcript elongation by RNA polymerase II Annual Review of Biochemistry. 79: 271-293. PMID 20367031 DOI: 10.1146/Annurev.Biochem.78.062807.091425 |
0.567 |
|
| 2010 |
Svejstrup JQ. The interface between transcription and mechanisms maintaining genome integrity. Trends in Biochemical Sciences. 35: 333-8. PMID 20194025 DOI: 10.1016/J.Tibs.2010.02.001 |
0.511 |
|
| 2010 |
Aygün O, Svejstrup JQ. RECQL5 helicase: connections to DNA recombination and RNA polymerase II transcription. Dna Repair. 9: 345-53. PMID 20080450 DOI: 10.1016/J.Dnarep.2009.12.008 |
0.591 |
|
| 2010 |
Taschner M, Harreman M, Teng Y, Gill H, Anindya R, Maslen SL, Skehel JM, Waters R, Svejstrup JQ. A role for checkpoint kinase-dependent Rad26 phosphorylation in transcription-coupled DNA repair in Saccharomyces cerevisiae. Molecular and Cellular Biology. 30: 436-46. PMID 19901073 DOI: 10.1128/Mcb.00822-09 |
0.44 |
|
| 2010 |
Kainov DE, Selth LA, Svejstrup JQ, Egly JM, Poterzsman A. Interacting partners of the Tfb2 subunit from yeast TFIIH. Dna Repair. 9: 33-9. PMID 19897425 DOI: 10.1016/J.Dnarep.2009.10.002 |
0.475 |
|
| 2009 |
Selth LA, Gilbert C, Svejstrup JQ. RNA immunoprecipitation to determine RNA-protein associations in vivo. Cold Spring Harbor Protocols. 2009: pdb.prot5234. PMID 20147192 DOI: 10.1101/Pdb.Prot5234 |
0.466 |
|
| 2009 |
Harreman M, Taschner M, Sigurdsson S, Anindya R, Reid J, Somesh B, Kong SE, Banks CAS, Conaway RC, Conaway JW, Svejstrup JQ. Distinct ubiquitin ligases act sequentially for RNA polymerase II polyubiquitylation Proceedings of the National Academy of Sciences of the United States of America. 106: 20705-20710. PMID 19920177 DOI: 10.1073/Pnas.0907052106 |
0.711 |
|
| 2009 |
Vispé S, DeVries L, Créancier L, Besse J, Bréand S, Hobson DJ, Svejstrup JQ, Annereau JP, Cussac D, Dumontet C, Guilbaud N, Barret JM, Bailly C. Triptolide is an inhibitor of RNA polymerase I and II-dependent transcription leading predominantly to down-regulation of short-lived mRNA. Molecular Cancer Therapeutics. 8: 2780-90. PMID 19808979 DOI: 10.1158/1535-7163.Mct-09-0549 |
0.591 |
|
| 2009 |
Saeki H, Svejstrup JQ. Stability, flexibility, and dynamic interactions of colliding RNA polymerase II elongation complexes. Molecular Cell. 35: 191-205. PMID 19647516 DOI: 10.1016/J.Molcel.2009.06.009 |
0.574 |
|
| 2009 |
Aygün O, Xu X, Liu Y, Takahashi H, Kong SE, Conaway RC, Conaway JW, Svejstrup JQ. Direct inhibition of RNA polymerase II transcription by RECQL5. The Journal of Biological Chemistry. 284: 23197-203. PMID 19570979 DOI: 10.1074/Jbc.M109.015750 |
0.772 |
|
| 2009 |
Selth LA, Lorch Y, Ocampo-Hafalla MT, Mitter R, Shales M, Krogan NJ, Kornberg RD, Svejstrup JQ. An rtt109-independent role for vps75 in transcription-associated nucleosome dynamics. Molecular and Cellular Biology. 29: 4220-34. PMID 19470761 DOI: 10.1128/Mcb.01882-08 |
0.486 |
|
| 2009 |
Greenwood C, Selth LA, Dirac-Svejstrup AB, Svejstrup JQ. An iron-sulfur cluster domain in Elp3 important for the structural integrity of elongator. The Journal of Biological Chemistry. 284: 141-9. PMID 18986986 DOI: 10.1074/Jbc.M805312200 |
0.353 |
|
| 2008 |
Aygün O, Svejstrup J, Liu Y. A RECQ5-RNA polymerase II association identified by targeted proteomic analysis of human chromatin. Proceedings of the National Academy of Sciences of the United States of America. 105: 8580-4. PMID 18562274 DOI: 10.1073/Pnas.0804424105 |
0.574 |
|
| 2008 |
Kvint K, Uhler JP, Taschner MJ, Sigurdsson S, Erdjument-Bromage H, Tempst P, Svejstrup JQ. Reversal of RNA polymerase II ubiquitylation by the ubiquitin protease Ubp3. Molecular Cell. 30: 498-506. PMID 18498751 DOI: 10.1016/J.Molcel.2008.04.018 |
0.572 |
|
| 2007 |
Anindya R, Aygün O, Svejstrup JQ. Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1. Molecular Cell. 28: 386-97. PMID 17996703 DOI: 10.1016/J.Molcel.2007.10.008 |
0.562 |
|
| 2007 |
Uhler JP, Hertel C, Svejstrup JQ. A role for noncoding transcription in activation of the yeast PHO5 gene Proceedings of the National Academy of Sciences of the United States of America. 104: 8011-8016. PMID 17470801 DOI: 10.1073/Pnas.0702431104 |
0.518 |
|
| 2007 |
Svejstrup JQ. Elongator complex: how many roles does it play? Current Opinion in Cell Biology. 19: 331-6. PMID 17466506 DOI: 10.1016/J.Ceb.2007.04.005 |
0.507 |
|
| 2007 |
Somesh BP, Sigurdsson S, Saeki H, Erdjument-Bromage H, Tempst P, Svejstrup JQ. Communication between distant sites in RNA polymerase II through ubiquitylation factors and the polymerase CTD. Cell. 129: 57-68. PMID 17418786 DOI: 10.1016/J.Cell.2007.01.046 |
0.463 |
|
| 2007 |
Søgaard TM, Svejstrup JQ. Hyperphosphorylation of the C-terminal repeat domain of RNA polymerase II facilitates dissociation of its complex with mediator. The Journal of Biological Chemistry. 282: 14113-20. PMID 17376774 DOI: 10.1074/Jbc.M701345200 |
0.426 |
|
| 2007 |
Svejstrup JQ. Contending with transcriptional arrest during RNAPII transcript elongation. Trends in Biochemical Sciences. 32: 165-71. PMID 17349792 DOI: 10.1016/J.Tibs.2007.02.005 |
0.563 |
|
| 2007 |
Selth L, Svejstrup JQ. Vps75, a new yeast member of the NAP histone chaperone family. The Journal of Biological Chemistry. 282: 12358-62. PMID 17344218 DOI: 10.1074/Jbc.C700012200 |
0.339 |
|
| 2006 |
Gilbert C, Svejstrup JQ. RNA immunoprecipitation for determining RNA-protein associations in vivo. Current Protocols in Molecular Biology. Unit 27.4. PMID 18265380 DOI: 10.1002/0471142727.Mb2704S75 |
0.493 |
|
| 2006 |
Svejstrup JQ, Conaway RC, Conaway JW. RNA Polymerase II: A "Nobel" Enzyme Demystified Molecular Cell. 24: 637-642. PMID 17157247 DOI: 10.1016/J.Molcel.2006.11.016 |
0.735 |
|
| 2006 |
Reid J, Svejstrup JQ. An assay for studying ubiquitylation of RNA polymerase II and other proteins in crude yeast extracts. Methods in Enzymology. 408: 264-73. PMID 16793374 DOI: 10.1016/S0076-6879(06)08016-5 |
0.406 |
|
| 2006 |
Close P, Hawkes N, Cornez I, Creppe C, Lambert CA, Rogister B, Siebenlist U, Merville MP, Slaugenhaupt SA, Bours V, Svejstrup JQ, Chariot A. Transcription impairment and cell migration defects in elongator-depleted cells: implication for familial dysautonomia. Molecular Cell. 22: 521-31. PMID 16713582 DOI: 10.1016/J.Molcel.2006.04.017 |
0.437 |
|
| 2005 |
Somesh BP, Reid J, Liu WF, Søgaard TM, Erdjument-Bromage H, Tempst P, Svejstrup JQ. Multiple mechanisms confining RNA polymerase II ubiquitylation to polymerases undergoing transcriptional arrest. Cell. 121: 913-23. PMID 15960978 DOI: 10.1016/J.Cell.2005.04.010 |
0.595 |
|
| 2005 |
Petrakis TG, Søgaard TM, Erdjument-Bromage H, Tempst P, Svejstrup JQ. Physical and functional interaction between Elongator and the chromatin-associated Kti12 protein. The Journal of Biological Chemistry. 280: 19454-60. PMID 15772087 DOI: 10.1074/Jbc.M413373200 |
0.451 |
|
| 2005 |
Kong SE, Kobor MS, Krogan NJ, Somesh BP, Søgaard TM, Greenblatt JF, Svejstrup JQ. Interaction of Fcp1 phosphatase with elongating RNA polymerase II holoenzyme, enzymatic mechanism of action, and genetic interaction with elongator. The Journal of Biological Chemistry. 280: 4299-306. PMID 15563457 DOI: 10.1074/Jbc.M411071200 |
0.562 |
|
| 2004 |
Kristjuhan A, Svejstrup JQ. Evidence for distinct mechanisms facilitating transcript elongation through chromatin in vivo. The Embo Journal. 23: 4243-52. PMID 15457216 DOI: 10.1038/Sj.Emboj.7600433 |
0.474 |
|
| 2004 |
Reid J, Svejstrup JQ. DNA damage-induced Def1-RNA polymerase II interaction and Def1 requirement for polymerase ubiquitylation in vitro. The Journal of Biological Chemistry. 279: 29875-8. PMID 15166235 DOI: 10.1074/Jbc.C400185200 |
0.563 |
|
| 2004 |
Gilbert C, Kristjuhan A, Winkler GS, Svejstrup JQ. Elongator interactions with nascent mRNA revealed by RNA immunoprecipitation. Molecular Cell. 14: 457-64. PMID 15149595 DOI: 10.1016/S1097-2765(04)00239-4 |
0.565 |
|
| 2004 |
Petrakis TG, Wittschieben BØ, Svejstrup JQ. Molecular architecture, structure-function relationship, and importance of the Elp3 subunit for the RNA binding of holo-elongator. The Journal of Biological Chemistry. 279: 32087-92. PMID 15138274 DOI: 10.1074/Jbc.M403361200 |
0.469 |
|
| 2004 |
Svejstrup JQ. The RNA polymerase II transcription cycle: cycling through chromatin. Biochimica Et Biophysica Acta. 1677: 64-73. PMID 15020047 DOI: 10.1016/J.Bbaexp.2003.10.012 |
0.536 |
|
| 2003 |
Svejstrup JQ, Petrakis TG, Fellows J. Purification of elongating RNA polymerase II and other factors from yeast chromatin. Methods in Enzymology. 371: 491-8. PMID 14712723 DOI: 10.1016/S0076-6879(03)71036-2 |
0.504 |
|
| 2003 |
Svejstrup J. Keeping RNA and DNA Apart during Transcription Molecular Cell. 12: 538-539. PMID 14527401 DOI: 10.1016/S1097-2765(03)00354-X |
0.579 |
|
| 2003 |
Svejstrup JQ. Transcription. Histones face the FACT. Science (New York, N.Y.). 301: 1053-5. PMID 12933997 DOI: 10.1126/Science.1088901 |
0.437 |
|
| 2003 |
Kristjuhan A, Wittschieben BO, Walker J, Roberts D, Cairns BR, Svejstrup JQ. Spreading of Sir3 protein in cells with severe histone H3 hypoacetylation. Proceedings of the National Academy of Sciences of the United States of America. 100: 7551-6. PMID 12796514 DOI: 10.1073/Pnas.1332299100 |
0.374 |
|
| 2003 |
Svejstrup JQ. Rescue of arrested RNA polymerase II complexes. Journal of Cell Science. 116: 447-51. PMID 12508106 DOI: 10.1242/Jcs.00271 |
0.553 |
|
| 2002 |
Kong SE, Svejstrup JQ. Incision of a 1,3-intrastrand d(GpTpG)-cisplatin adduct by nucleotide excision repair proteins from yeast. Dna Repair. 1: 731-41. PMID 12509277 DOI: 10.1016/S1568-7864(02)00080-0 |
0.415 |
|
| 2002 |
Kristjuhan A, Walker J, Suka N, Grunstein M, Roberts D, Cairns BR, Svejstrup JQ. Transcriptional inhibition of genes with severe histone h3 hypoacetylation in the coding region. Molecular Cell. 10: 925-33. PMID 12419235 DOI: 10.1016/S1097-2765(02)00647-0 |
0.367 |
|
| 2002 |
Svejstrup JQ. Transcription repair coupling factor: a very pushy enzyme. Molecular Cell. 9: 1151-2. PMID 12086609 DOI: 10.1016/S1097-2765(02)00553-1 |
0.527 |
|
| 2002 |
Sebastiaan Winkler G, Lacomis L, Philip J, Erdjument-Bromage H, Svejstrup JQ, Tempst P. Isolation and mass spectrometry of transcription factor complexes. Methods (San Diego, Calif.). 26: 260-9. PMID 12054882 DOI: 10.1016/S1046-2023(02)00030-0 |
0.366 |
|
| 2002 |
Winkler GS, Kristjuhan A, Erdjument-Bromage H, Tempst P, Svejstrup JQ. Elongator is a histone H3 and H4 acetyltransferase important for normal histone acetylation levels in vivo. Proceedings of the National Academy of Sciences of the United States of America. 99: 3517-22. PMID 11904415 DOI: 10.1073/Pnas.022042899 |
0.358 |
|
| 2002 |
Svejstrup JQ. Chromatin elongation factors. Current Opinion in Genetics & Development. 12: 156-61. PMID 11893488 DOI: 10.1016/S0959-437X(02)00281-2 |
0.52 |
|
| 2002 |
Woudstra EC, Gilbert C, Fellows J, Jansen L, Brouwer J, Erdjument-Bromage H, Tempst P, Svejstrup JQ. A Rad26-Def1 complex coordinates repair and RNA pol II proteolysis in response to DNA damage. Nature. 415: 929-33. PMID 11859374 DOI: 10.1038/415929A |
0.537 |
|
| 2002 |
Svejstrup JQ. Mechanisms of transcription-coupled DNA repair. Nature Reviews. Molecular Cell Biology. 3: 21-9. PMID 11823795 DOI: 10.1038/Nrm703 |
0.505 |
|
| 2002 |
Hawkes NA, Otero G, Winkler GS, Marshall N, Dahmus ME, Krappmann D, Scheidereit C, Thomas CL, Schiavo G, Erdjument-Bromage H, Tempst P, Svejstrup JQ. Purification and characterization of the human elongator complex. The Journal of Biological Chemistry. 277: 3047-52. PMID 11714725 DOI: 10.1074/Jbc.M110445200 |
0.432 |
|
| 2001 |
Barbaric S, Walker J, Schmid A, Svejstrup JQ, Hörz W. Increasing the rate of chromatin remodeling and gene activation--a novel role for the histone acetyltransferase Gcn5. The Embo Journal. 20: 4944-4951. PMID 11532958 DOI: 10.1093/Emboj/20.17.4944 |
0.386 |
|
| 2001 |
Winkler GS, Petrakis TG, Ethelberg S, Tokunaga M, Erdjument-Bromage H, Tempst P, Svejstrup JQ. RNA polymerase II elongator holoenzyme is composed of two discrete subcomplexes. Journal of Biological Chemistry. 276: 32743-32749. PMID 11435442 DOI: 10.1074/Jbc.M105303200 |
0.526 |
|
| 2001 |
Jona G, Wittschieben BØ, Svejstrup JQ, Gileadi O. Involvement of yeast carboxy-terminal domain kinase I (CTDK-I) in transcription elongation in vivo Gene. 267: 31-36. PMID 11311553 DOI: 10.1016/S0378-1119(01)00389-4 |
0.567 |
|
| 2001 |
Svejstrup J. When science gets really big: the structure of RNA polymerase II at atomic resolution Trends in Biochemical Sciences. 26: 352. DOI: 10.1016/S0968-0004(01)01875-8 |
0.524 |
|
| 2001 |
Svejstrup JQ. Transcription-coupled DNA repair without the transcription-coupling repair factor Trends in Biochemical Sciences. 26: 151. DOI: 10.1016/S0968-0004(00)01766-7 |
0.588 |
|
| 2000 |
Chavez S, Beilharz T, Rondon AG, Erdjument-Bromage H, Tempst P, Svejstrup JQ, Lithgow TJ, Aguilera A. A protein complex containing Tho2, Hpr1, Mft1 and a novel protein, Thp2, connects transcription elongation with mitotic recombination in Saccharomyces cerevisiae The Embo Journal. 19: 5824-5834. PMID 11060033 DOI: 10.1093/Emboj/19.21.5824 |
0.466 |
|
| 2000 |
Wittschieben B, Fellows J, Wendy D, Stillman DJ, Svejstrup JQ. Overlapping roles for the histone acetyltransferase activities of SAGA and Elongator in vivo Embo Journal. 19: 3060-3068. PMID 10856249 DOI: 10.1093/Emboj/19.12.3060 |
0.352 |
|
| 2000 |
Fellows J, Erdjument-Bromage H, Tempst P, Svejstrup JQ. The Elp2 subunit of elongator and elongating RNA polymerase II holoenzyme is a WD40 repeat protein. Journal of Biological Chemistry. 275: 12896-12899. PMID 10777588 DOI: 10.1074/Jbc.275.17.12896 |
0.512 |
|
| 1999 |
Wittschieben BO, Otero G, de Bizemont T, Fellows J, Erdjument-Bromage H, Ohba R, Li Y, Allis CD, Tempst P, Svejstrup JQ. A novel histone acetyltransferase is an integral subunit of elongating RNA polymerase II holoenzyme. Molecular Cell. 4: 123-8. PMID 10445034 DOI: 10.1016/S1097-2765(00)80194-X |
0.559 |
|
| 1999 |
Otero G, Fellows J, Li Y, Bizemont Td, Dirac AMG, Gustafsson CM, Erdjument-Bromage H, Tempst P, Svejstrup JQ. Elongator, a multisubunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation. Molecular Cell. 3: 109-118. PMID 10024884 DOI: 10.1016/S1097-2765(00)80179-3 |
0.556 |
|
| 1997 |
Feaver WJ, Henry NL, Wang Z, Wu X, Svejstrup JQ, Bushnell DA, Friedberg EC, Kornberg RD. Genes for Tfb2, Tfb3, and Tfb4 subunits of yeast transcription/repair factor IIH. Homology to human cyclin-dependent kinase activating kinase and IIH subunits. The Journal of Biological Chemistry. 272: 19319-27. PMID 9235928 DOI: 10.1074/Jbc.272.31.19319 |
0.447 |
|
| 1997 |
Svejstrup JQ, Li Y, Fellows J, Gnatt A, Bjorklund S, Kornberg RD. Evidence for a mediator cycle at the initiation of transcription. Proceedings of the National Academy of Sciences of the United States of America. 94: 6075-8. PMID 9177171 DOI: 10.1073/Pnas.94.12.6075 |
0.546 |
|
| 1997 |
Wang Z, Wei S, Reed SH, Wu X, Svejstrup JQ, Feaver WJ, Kornberg RD, Friedberg EC. The RAD7, RAD16, and RAD23 genes of Saccharomyces cerevisiae: requirement for transcription-independent nucleotide excision repair in vitro and interactions between the gene products. Molecular and Cellular Biology. 17: 635-43. PMID 9001217 DOI: 10.1128/Mcb.17.2.635 |
0.451 |
|
| 1996 |
Jensen AD, Svejstrup JQ. Purification and characterization of human topoisomerase I mutants. Febs Journal. 236: 389-394. PMID 8612607 DOI: 10.1111/J.1432-1033.1996.00389.X |
0.391 |
|
| 1996 |
Svejstrup JQ, Feaver WJ, Kornberg RD. Subunits of yeast RNA polymerase II transcription factor TFIIH encoded by the CCL1 gene. The Journal of Biological Chemistry. 271: 643-5. PMID 8557668 DOI: 10.1074/Jbc.271.2.643 |
0.566 |
|
| 1996 |
Svejstrup JQ, Vichi P, Egly J. The multiple roles of transcription/repair factor TFIIH. Trends in Biochemical Sciences. 21: 346-350. DOI: 10.1016/S0968-0004(96)10046-3 |
0.564 |
|
| 1995 |
Wang Z, Buratowski S, Svejstrup JQ, Feaver WJ, Wu X, Kornberg RD, Donahue TF, Friedberg EC. The yeast TFB1 and SSL1 genes, which encode subunits of transcription factor IIH, are required for nucleotide excision repair and RNA polymerase II transcription. Molecular and Cellular Biology. 15: 2288-93. PMID 7891722 DOI: 10.1128/Mcb.15.4.2288 |
0.543 |
|
| 1995 |
Svejstrup JQ, Wang Z, Feave WJ, Wu X, Bushnell DA, Donahue TF, Friedberg EC, Kornberg RD. Different forms of TFIIH for transcription and DNA repair: Holo-TFIIH and a nucleotide excision repairosome Cell. 80: 21-28. PMID 7813015 DOI: 10.1016/0092-8674(95)90447-6 |
0.518 |
|
| 1995 |
Friedberg EC, Bardwell AJ, Bardwell L, Feaver WJ, Kornberg RD, Svejstrup JQ, Tomkinson AE, Wang Z. Nucleotide excision repair in the yeast Saccharomyces cerevisiae: its relationship to specialized mitotic recombination and RNA polymerase II basal transcription Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences. 347: 63-68. PMID 7746856 DOI: 10.1098/Rstb.1995.0010 |
0.534 |
|
| 1994 |
Bardwell AJ, Bardwell L, Iyer N, Svejstrup JQ, Feaver WJ, Kornberg RD, Friedberg EC. Yeast nucleotide excision repair proteins Rad2 and Rad4 interact with RNA polymerase II basal transcription factor b (TFIIH) Molecular and Cellular Biology. 14: 3569-3576. PMID 8196602 DOI: 10.1128/Mcb.14.6.3569 |
0.494 |
|
| 1994 |
Bardwell L, Bardwell AJ, Feaver WJ, Svejstrup JQ, Kornberg RD, Friedberg EC. Yeast RAD3 protein binds directly to both SSL2 and SSL1 proteins: Implications for the structure and function of transcription/ repair factor b Proceedings of the National Academy of Sciences of the United States of America. 91: 3926-3930. PMID 8171014 DOI: 10.1073/Pnas.91.9.3926 |
0.443 |
|
| 1994 |
Wang Z, Svejstrup JQ, Feaver WJ, Wu X, Kornberg RD, Friedberg EC. Transcription factor b (TFIIH) is required during nucleotide-excision repair in yeast Nature. 368: 74-76. PMID 8107888 DOI: 10.1038/368074A0 |
0.477 |
|
| 1994 |
Bardwell AJ, Bardwell L, Wang Z, Siede W, Reagan MS, Tomkinson AE, Friedberg AS, Pittenger C, Feaver WJ, Svejstrup J, Kornberg RD, Friedberg EC. Recent insights on DNA repair. The mechanism of damaged nucleotide excision in eukaryotes and its relationship to other cellular processes Annals of the New York Academy of Sciences. 726: 281-291. PMID 8092684 DOI: 10.1111/J.1749-6632.1994.Tb52829.X |
0.402 |
|
| 1994 |
Feaver WJ, Svejstrup JQ, Henry NL, Kornberg RD. Relationship of CDK-activating kinase and RNA polymerase II CTD kinase TFIIH/TFIIK Cell. 79: 1103-1109. PMID 8001136 DOI: 10.1016/0092-8674(94)90040-X |
0.466 |
|
| 1994 |
Svejstrup JQ, Feaver WJ, LaPointe J, Kornberg RD. RNA polymerase transcription factor IIH holoenzyme from yeast Journal of Biological Chemistry. 269: 28044-28048. PMID 7961739 |
0.423 |
|
| 1994 |
Andersen AH, Svejstrup JQ, Westergaard O. The DNA binding, cleavage, and religation reactions of eukaryotic topoisomerases I and II. Advances in Pharmacology (San Diego). 29: 83-101. PMID 7826866 DOI: 10.1016/S1054-3589(08)60541-4 |
0.396 |
|
| 1993 |
Gromova II, Kjeldsen E, Svejstrup JQ, Alsner J, Christiansen K, Westergaard O. Characterization of an altered DNA catalysis of a camptothecin-resistant eukaryotic topoisomerase I Nucleic Acids Research. 21: 593-600. PMID 8382801 DOI: 10.1093/Nar/21.3.593 |
0.368 |
|
| 1993 |
Feaver WJ, Svejstrup JQ, Bardwell L, Bardwell AJ, Buratowski S, Gulyas KD, Donahue TF, Friedberg EC, Kornberg RD. Dual roles of a multiprotein complex from S. cerevisiae in transcription and DNA repair. Cell. 75: 1379-87. PMID 8269516 DOI: 10.1016/0092-8674(93)90624-Y |
0.51 |
|
| 1992 |
Kjeldsen E, Svejstrup JQ, Gromova II, Alsner J, Westergaard O. Camptothecin inhibits both the cleavage and religation reactions of eukaryotic DNA topoisomerase I. Journal of Molecular Biology. 228: 1025-1030. PMID 1335513 DOI: 10.1016/0022-2836(92)90310-G |
0.371 |
|
| 1991 |
Svejstrup JQ, Christiansen K, Gromova II, Andersen AH, Westergaard O. New technique for uncoupling the cleavage and religation reactions of eukaryotic topoisomerase I. The mode of action of camptothecin at a specific recognition site. Journal of Molecular Biology. 222: 669-678. PMID 1660929 DOI: 10.1016/0022-2836(91)90503-X |
0.308 |
|
| 1990 |
Lund K, Andersen A, Christiansen K, Svejstrup J, Westergaard O. Minimal DNA requirement for topoisomerase II-mediated cleavage in vitro. Journal of Biological Chemistry. 265: 13856-13863. DOI: 10.1016/s0021-9258(18)77427-9 |
0.34 |
|
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