Vani Brahmachari - Publications

Affiliations: 
Dr B R Ambedkar Center for Biomedical Research University of Delhi 

42 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2022 Verma A, Arya R, Brahmachari V. Identification of a polycomb responsive region in human HoxA cluster and its long-range interaction with polycomb enriched genomic regions. Gene. 845: 146832. PMID 36007803 DOI: 10.1016/j.gene.2022.146832  0.32
2020 Bhattacharyya K, Nemaysh V, Joon M, Pratap R, Varma-Basil M, Bose M, Brahmachari V. Correlation of drug resistance with single nucleotide variations through genome analysis and experimental validation in a multi-drug resistant clinical isolate of M. tuberculosis. Bmc Microbiology. 20: 223. PMID 32711461 DOI: 10.1186/S12866-020-01912-6  0.308
2020 Verma A, Maini J, Jain S, Ghasemi M, Kohli S, Brahmachari V. Epigenetic regulation and transcriptional memory in development; selection facilitating prudence. The International Journal of Developmental Biology. 64: 191-211. PMID 32659007 DOI: 10.1387/Ijdb.190285Vb  0.66
2020 Gulati P, Kohli S, Narang A, Brahmachari V. Mining histone methyltransferases and demethylases from whole genome sequence. Journal of Biosciences. 45. PMID 31965987 DOI: 10.1007/S12038-019-9982-3  0.427
2020 Jain S, Maini J, Narang A, Maiti S, Brahmachari V. The regulatory function of dIno80 correlates with its DNA binding activity. Gene. 144368. PMID 31954859 DOI: 10.1016/J.Gene.2020.144368  0.659
2018 Brahmachari V, Kohli S, Gulati P. In praise of mealybugs. Journal of Genetics. 97: 379-389. PMID 29932057 DOI: 10.1007/S12041-018-0921-0  0.385
2017 Sharma V, Kohli S, Brahmachari V. Correlation between desiccation stress response and epigenetic modifications of genes in Drosophila melanogaster: An example of environment-epigenome interaction. Biochimica Et Biophysica Acta. PMID 28801151 DOI: 10.1016/J.Bbagrm.2017.08.001  0.332
2017 Maini J, Ghasemi M, Yandhuri D, Thakur SS, Brahmachari V. Corrigendum to "Human PRE-PIK3C2B, an intronic cis-element with dual function of activation and repression" [BBA - Gene Regul. Mech. 1860/2 (2017) 196-204]. Biochimica Et Biophysica Acta. PMID 28371618 DOI: 10.1016/J.Bbagrm.2017.03.005  0.347
2017 Jain S, Bhattacharyya K, Bakshi R, Narang A, Brahmachari V. Distinguishing between biochemical and cellular function: Are there peptide signatures for cellular function of proteins? Proteins. PMID 28097693 DOI: 10.1002/Prot.25248  0.624
2016 Maini J, Ghasemi M, Yandhuri D, Thakur SS, Brahmachari V. Human PRE-PIK3C2B, an intronic cis-element with dual function of activation and repression. Biochimica Et Biophysica Acta. PMID 27932267 DOI: 10.1016/J.Bbagrm.2016.12.003  0.384
2016 Mendiratta S, Bhatia S, Jain S, Kaur T, Brahmachari V. Interaction of the Chromatin Remodeling Protein hINO80 with DNA. Plos One. 11: e0159370. PMID 27428271 DOI: 10.1371/Journal.Pone.0159370  0.653
2015 Ghasemi M, Pawar H, Mishra RK, Brahmachari V. The functional diversity of Drosophila Ino80 in development. Mechanisms of Development. PMID 26253267 DOI: 10.1016/J.Mod.2015.07.014  0.454
2014 Sharma P, Garg G, Kumar A, Mohammad F, Kumar SR, Tanwar VS, Sati S, Sharma A, Karthikeyan G, Brahmachari V, Sengupta S. Genome wide DNA methylation profiling for epigenetic alteration in coronary artery disease patients. Gene. 541: 31-40. PMID 24582973 DOI: 10.1016/J.Gene.2014.02.034  0.341
2014 Chandolia A, Rathor N, Sharma M, Saini NK, Sinha R, Malhotra P, Brahmachari V, Bose M. Functional analysis of mce4A gene of Mycobacterium tuberculosis H37Rv using antisense approach. Microbiological Research. 169: 780-7. PMID 24556072 DOI: 10.1016/J.Micres.2013.12.008  0.367
2014 Mendiratta S, Jain S, Maini J, Brahmachari V. Pharmacoepigenomics: an interplay of epigenetic modulation of drug response and modulation of the epigenome by drugs. Current Pharmaceutical Design. 20: 1819-30. PMID 23888943 DOI: 10.2174/13816128113199990542  0.571
2013 Bengani H, Mendiratta S, Maini J, Vasanthi D, Sultana H, Ghasemi M, Ahluwalia J, Ramachandran S, Mishra RK, Brahmachari V. Identification and Validation of a Putative Polycomb Responsive Element in the Human Genome. Plos One. 8: e67217. PMID 23805300 DOI: 10.1371/Journal.Pone.0067217  0.445
2012 Bargaje R, Alam MP, Patowary A, Sarkar M, Ali T, Gupta S, Garg M, Singh M, Purkanti R, Scaria V, Sivasubbu S, Brahmachari V, Pillai B. Proximity of H2A.Z containing nucleosome to the transcription start site influences gene expression levels in the mammalian liver and brain. Nucleic Acids Research. 40: 8965-78. PMID 22821566 DOI: 10.1093/Nar/Gks665  0.383
2011 Datta S, Alam MP, Majumdar SS, Mehta AK, Maiti S, Wadhwa N, Brahmachari V. Nucleosomal occupancy and CGG repeat expansion: a comparative analysis of triplet repeat region from mouse and human fragile X mental retardation gene 1. Chromosome Research : An International Journal On the Molecular, Supramolecular and Evolutionary Aspects of Chromosome Biology. 19: 445-55. PMID 21499798 DOI: 10.1007/S10577-011-9206-7  0.399
2011 Pasricha R, Chandolia A, Ponnan P, Saini NK, Sharma S, Chopra M, Basil MV, Brahmachari V, Bose M. Single nucleotide polymorphism in the genes of mce1 and mce4 operons of Mycobacterium tuberculosis: analysis of clinical isolates and standard reference strains. Bmc Microbiology. 11: 41. PMID 21345183 DOI: 10.1186/1471-2180-11-41  0.332
2010 Mathur V, Mendiratta G, Ganapathi M, Kennady PK, Dwarkanath BS, Pande G, Brahmachari V. An analysis of histone modifications in relation to sex-specific chromatin organization in the mealybug Maconellicoccus hirsutus. Cytogenetic and Genome Research. 129: 323-31. PMID 20616523 DOI: 10.1159/000315899  0.389
2010 Bhatia S, Pawar H, Dasari V, Mishra RK, Chandrashekaran S, Brahmachari V. Chromatin remodeling protein INO80 has a role in regulation of homeotic gene expression in Drosophila. Genes to Cells : Devoted to Molecular & Cellular Mechanisms. 15: 725-35. PMID 20545766 DOI: 10.1111/J.1365-2443.2010.01416.X  0.438
2010 Joon M, Bhatia S, Pasricha R, Bose M, Brahmachari V. Functional analysis of an intergenic non-coding sequence within mce1 operon of M.tuberculosis. Bmc Microbiology. 10: 128. PMID 20420720 DOI: 10.1186/1471-2180-10-128  0.345
2010 Alam MP, Datta S, Majumdar S, Mehta AK, Baskaran S, Gulati N, Brahmachari V. Comparative analysis of DNA methylation in transgenic mice with unstable CGG repeats from FMR1 gene. Epigenetics. 5: 241-8. PMID 20364100 DOI: 10.4161/Epi.5.3.11417  0.397
2009 Ahluwalia JK, Hariharan M, Bargaje R, Pillai B, Brahmachari V. Incomplete penetrance and variable expressivity: is there a microRNA connection? Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 31: 981-92. PMID 19642110 DOI: 10.1002/Bies.200900066  0.311
2009 Mehta AK, Majumdar SS, Alam P, Gulati N, Brahmachari V. Epigenetic regulation of cytomegalovirus major immediate-early promoter activity in transgenic mice. Gene. 428: 20-4. PMID 18976699 DOI: 10.1016/J.Gene.2008.09.033  0.417
2008 Sachdeva P, Narayan A, Misra R, Brahmachari V, Singh Y. Loss of kinase activity in Mycobacterium tuberculosis multidomain protein Rv1364c. The Febs Journal. 275: 6295-308. PMID 19016841 DOI: 10.1111/J.1742-4658.2008.06753.X  0.315
2008 Sharma P, Kumar J, Garg G, Kumar A, Patowary A, Karthikeyan G, Ramakrishnan L, Brahmachari V, Sengupta S. Detection of altered global DNA methylation in coronary artery disease patients. Dna and Cell Biology. 27: 357-65. PMID 18613790 DOI: 10.1089/Dna.2007.0694  0.328
2007 Bengani H, Ganapathi M, Singh GP, Brahmachari V. Mining of putative cis-acting elements for chromatin mediated regulation of Hox genes in mammals by in-silico analysis. Journal of Experimental Zoology. Part B, Molecular and Developmental Evolution. 308: 384-95. PMID 17358016 DOI: 10.1002/Jez.B.21162  0.46
2007 Ganapathi M, Singh GP, Sandhu KS, Brahmachari SK, Brahmachari V. A whole genome analysis of 5' regulatory regions of human genes for putative cis-acting modulators of nucleosome positioning. Gene. 391: 242-51. PMID 17321698 DOI: 10.1016/J.Gene.2007.01.008  0.444
2006 Sharma P, Senthilkumar RD, Brahmachari V, Sundaramoorthy E, Mahajan A, Sharma A, Sengupta S. Mining literature for a comprehensive pathway analysis: a case study for retrieval of homocysteine related genes for genetic and epigenetic studies. Lipids in Health and Disease. 5: 1. PMID 16430779 DOI: 10.1186/1476-511X-5-1  0.363
2006 Bakshi R, Mehta AK, Sharma R, Maiti S, Pasha S, Brahmachari V. Characterization of a human SWI2/SNF2 like protein hINO80: demonstration of catalytic and DNA binding activity. Biochemical and Biophysical Research Communications. 339: 313-20. PMID 16298340 DOI: 10.1016/J.Bbrc.2005.10.206  0.44
2005 Ghosh MK, Katyal A, Chandra R, Brahmachari V. Targeted activation of transcription in vivo through hairpin-triplex forming oligonucleotide in Saccharomyces cerevisiae. Molecular and Cellular Biochemistry. 278: 147-55. PMID 16180100 DOI: 10.1007/S11010-005-7283-7  0.439
2005 Ganapathi M, Srivastava P, Das Sutar SK, Kumar K, Dasgupta D, Pal Singh G, Brahmachari V, Brahmachari SK. Comparative analysis of chromatin landscape in regulatory regions of human housekeeping and tissue specific genes. Bmc Bioinformatics. 6: 126. PMID 15918906 DOI: 10.1186/1471-2105-6-126  0.415
2005 Kumar A, Chandolia A, Chaudhry U, Brahmachari V, Bose M. Comparison of mammalian cell entry operons of mycobacteria: in silico analysis and expression profiling. Fems Immunology and Medical Microbiology. 43: 185-95. PMID 15681149 DOI: 10.1016/J.Femsim.2004.08.013  0.335
2004 Bakshi R, Prakash T, Dash D, Brahmachari V. In silico characterization of the INO80 subfamily of SWI2/SNF2 chromatin remodeling proteins Biochemical and Biophysical Research Communications. 320: 197-204. PMID 15207721 DOI: 10.1016/J.Bbrc.2004.05.147  0.397
2003 Kumar A, Bose M, Brahmachari V. Analysis of expression profile of mammalian cell entry (mce) operons of Mycobacterium tuberculosis. Infection and Immunity. 71: 6083-7. PMID 14500535 DOI: 10.1128/Iai.71.10.6083-6087.2003  0.309
2002 Ghosh MK, Katyal A, Brahmachari V, Chandra R. Design and structural analysis of hairpin-TFO for transcriptional activation of genes in S. cerevisiae. Journal of Biomolecular Structure & Dynamics. 20: 265-73. PMID 12354078 DOI: 10.1080/07391102.2002.10506842  0.417
1999 Khosla S, Augustus M, Brahmachari V. Sex-specific organisation of middle repetitive DNA sequences in the mealybug Planococcus lilacinus. Nucleic Acids Research. 27: 3745-3751. PMID 10471745 DOI: 10.1093/Nar/27.18.3745  0.374
1996 Khosla S, Kantheti P, Brahmachari V, Chandra HS. A male-specific nuclease-resistant chromatin fraction in the mealybug Planococcus lilacinus. Chromosoma. 104: 386-92. PMID 8575251 DOI: 10.1007/Bf00337228  0.388
1996 Brahmachari V. Know your chromosomes: 1. Nature’s way of packing genes Resonance. 1: 40-47. DOI: 10.1007/Bf02838857  0.323
1992 Devajyothi C, Brahmachari V. Detection of a CpA methylase in an insect system: characterization and substrate specificity. Molecular and Cellular Biochemistry. 110: 103-111. PMID 1374836 DOI: 10.1007/Bf02454187  0.315
1989 Devajyothi C, Brahmachari V. Modulation of DNA methyltransferase during the life cycle of a mealybug Planococcus lilacinus Febs Letters. 250: 134-138. DOI: 10.1016/0014-5793(89)80705-7  0.318
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