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Hanna Johannesson - Publications

Affiliations: 
Plant and Microbial Biology University of California, Berkeley, Berkeley, CA, United States 
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49 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Khan FK, Sánchez-García M, Johannesson H, Ryberg M. High rate of gene family evolution in proximity to the origin of ectomycorrhizal symbiosis in Inocybaceae. The New Phytologist. PMID 39113397 DOI: 10.1111/nph.20007  0.319
2024 Stanojković A, Skoupý S, Johannesson H, Dvořák P. The global speciation continuum of the cyanobacterium Microcoleus. Nature Communications. 15: 2122. PMID 38459017 DOI: 10.1038/s41467-024-46459-6  0.365
2024 Ament-Velásquez SL, Vogan AA, Wallerman O, Hartmann FE, Gautier V, Silar P, Giraud T, Johannesson H. High-Quality Genome Assemblies of 4 Members of the Podospora anserina Species Complex. Genome Biology and Evolution. 16. PMID 38386982 DOI: 10.1093/gbe/evae034  0.337
2024 Westerberg I, Ament-Velásquez SL, Vogan AA, Johannesson H. Evolutionary dynamics of the LTR-retrotransposon crapaud in the Podospora anserina species complex and the interaction with repeat-induced point mutations. Mobile Dna. 15: 1. PMID 38218923 DOI: 10.1186/s13100-023-00311-8  0.327
2023 Hensen N, Bonometti L, Westerberg I, Brännström IO, Guillou S, Cros-Aarteil S, Calhoun S, Haridas S, Kuo A, Mondo S, Pangilinan J, Riley R, LaButti K, Andreopoulos B, Lipzen A, ... ... Johannesson H, et al. Genome-scale phylogeny and comparative genomics of the fungal order Sordariales. Molecular Phylogenetics and Evolution. 189: 107938. PMID 37820761 DOI: 10.1016/j.ympev.2023.107938  0.729
2022 Hiltunen M, Ament-Velásquez SL, Ryberg M, Johannesson H. Stage-specific transposon activity in the life cycle of the fairy-ring mushroom Marasmius oreades. Proceedings of the National Academy of Sciences of the United States of America. 119: e2208575119. PMID 36343254 DOI: 10.1073/pnas.2208575119  0.32
2022 Vogan A, Svedberg J, Grudzinska-Sterno M, Johannesson H. Meiotic drive is associated with sexual incompatibility in Neurospora. Evolution; International Journal of Organic Evolution. PMID 36148939 DOI: 10.1111/evo.14630  0.307
2022 Saupe SJ, Johannesson H. On the Mechanistic Basis of Killer Meiotic Drive in Fungi. Annual Review of Microbiology. 76: 305-323. PMID 36075094 DOI: 10.1146/annurev-micro-041320-113730  0.316
2022 Vogan AA, Martinossi-Allibert I, Ament-Velásquez SL, Svedberg J, Johannesson H. The spore killers, fungal meiotic driver elements. Mycologia. 114: 1-23. PMID 35138994 DOI: 10.1080/00275514.2021.1994815  0.334
2022 Hiltunen M, Ament-Velásquez SL, Johannesson H. The Assembled and Annotated Genome of the Fairy-Ring Fungus Marasmius oreades. Genome Biology and Evolution. 13. PMID 34051082 DOI: 10.1093/gbe/evab126  0.32
2021 Ament-Velásquez SL, Tuovinen V, Bergström L, Spribille T, Vanderpool D, Nascimbene J, Yamamoto Y, Thor G, Johannesson H. The Plot Thickens: Haploid and Triploid-Like Thalli, Hybridization, and Biased Mating Type Ratios in . Frontiers in Fungal Biology. 2: 656386. PMID 37744149 DOI: 10.3389/ffunb.2021.656386  0.391
2021 Montoliu-Nerin M, Sánchez-García M, Bergin C, Kutschera VE, Johannesson H, Bever JD, Rosling A. In-depth Phylogenomic Analysis of Arbuscular Mycorrhizal Fungi Based on a Comprehensive Set of Genome Assemblies. Frontiers in Fungal Biology. 2: 716385. PMID 37744125 DOI: 10.3389/ffunb.2021.716385  0.352
2021 Zanders S, Johannesson H. Molecular Mechanisms and Evolutionary Consequences of Spore Killers in Ascomycetes. Microbiology and Molecular Biology Reviews : Mmbr. 85: e0001621. PMID 34756084 DOI: 10.1128/MMBR.00016-21  0.301
2021 Svedberg J, Vogan AA, Rhoades NA, Sarmarajeewa D, Jacobson DJ, Lascoux M, Hammond TM, Johannesson H. An introgressed gene causes meiotic drive in . Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33875604 DOI: 10.1073/pnas.2026605118  0.382
2021 Vogan AA, Ament-Velásquez SL, Bastiaans E, Wallerman O, Saupe SJ, Suh A, Johannesson H. The , a massive transposon carrying meiotic drive genes. Genome Research. PMID 33875482 DOI: 10.1101/gr.267609.120  0.344
2021 Hartmann FE, Ament-Velásquez SL, Vogan AA, Gautier V, Le Prieur S, Berramdane M, Snirc A, Johannesson H, Grognet P, Malagnac F, Silar P, Giraud T. Size variation of the non-recombining region on the mating-type chromosomes in the fungal Podospora anserina species complex. Molecular Biology and Evolution. PMID 33555341 DOI: 10.1093/molbev/msab040  0.307
2020 Ament-Velásquez SL, Johannesson H, Giraud T, Debuchy R, Saupe SJ, Debets AJM, Bastiaans E, Malagnac F, Grognet P, Peraza-Reyes L, Gladieux P, Kruys Å, Silar P, Huhndorf SM, Miller AN, et al. The taxonomy of the model filamentous fungus . Mycokeys. 75: 51-69. PMID 33281477 DOI: 10.3897/mycokeys.75.55968  0.612
2020 Montoliu-Nerin M, Sánchez-García M, Bergin C, Grabherr M, Ellis B, Kutschera VE, Kierczak M, Johannesson H, Rosling A. Building de novo reference genome assemblies of complex eukaryotic microorganisms from single nuclei. Scientific Reports. 10: 1303. PMID 31992756 DOI: 10.1038/S41598-020-58025-3  0.305
2020 Gladieux P, De Bellis F, Hann-Soden C, Svedberg J, Johannesson H, Taylor JW. Neurospora from Natural Populations: Population Genomics Insights into the Life History of a Model Microbial Eukaryote. Methods in Molecular Biology (Clifton, N.J.). 2090: 313-336. PMID 31975173 DOI: 10.1007/978-1-0716-0199-0_13  0.658
2019 Vogan AA, Ament-Velásquez SL, Granger-Farbos A, Svedberg J, Bastiaans E, Debets AJ, Coustou V, Yvanne H, Clavé C, Saupe SJ, Johannesson H. Combinations of genes create multiple meiotic drivers in . Elife. 8. PMID 31347500 DOI: 10.7554/eLife.46454  0.349
2016 Lindholm AK, Dyer KA, Firman RC, Fishman L, Forstmeier W, Holman L, Johannesson H, Knief U, Kokko H, Larracuente AM, Manser A, Montchamp-Moreau C, Petrosyan VG, Pomiankowski A, Presgraves DC, et al. The Ecology and Evolutionary Dynamics of Meiotic Drive. Trends in Ecology & Evolution. PMID 26920473 DOI: 10.1016/J.Tree.2016.02.001  0.329
2016 Corcoran P, Anderson JL, Jacobson DJ, Sun Y, Ni P, Lascoux M, Johannesson H. Introgression maintains the genetic integrity of the sex-determining chromosome of the fungus Neurospora tetrasperma. Genome Research. PMID 26893460 DOI: 10.1101/Gr.197244.115  0.401
2015 Idnurm A, Hood ME, Johannesson H, Giraud T. Contrasted patterns in mating-type chromosomes in fungi: hotspots versus coldspots of recombination. Fungal Biology Reviews. 29: 220-229. PMID 26688691 DOI: 10.1016/j.fbr.2015.06.001  0.342
2015 Sun Y, Whittle CA, Corcoran P, Johannesson H. Intron evolution in Neurospora: the role of mutational bias and selection. Genome Research. 25: 100-10. PMID 25342722 DOI: 10.1101/gr.175653.114  0.33
2014 Whittle CA, Sun Y, Johannesson H. Dynamics of transcriptome evolution in the model eukaryote Neurospora Journal of Evolutionary Biology. 27: 1125-1135. PMID 24848562 DOI: 10.1111/jeb.12386  0.337
2014 Corcoran P, Dettman JR, Sun Y, Luque EM, Corrochano LM, Taylor JW, Lascoux M, Johannesson H. A global multilocus analysis of the model fungus Neurospora reveals a single recent origin of a novel genetic system. Molecular Phylogenetics and Evolution. 78: 136-47. PMID 24845789 DOI: 10.1016/J.Ympev.2014.05.007  0.693
2013 Gioti A, Stajich JE, Johannesson H. Neurospora and the dead-end hypothesis: genomic consequences of selfing in the model genus. Evolution; International Journal of Organic Evolution. 67: 3600-16. PMID 24299411 DOI: 10.1111/Evo.12206  0.57
2013 Samils N, Gioti A, Karlsson M, Sun Y, Kasuga T, Bastiaans E, Wang Z, Li N, Townsend JP, Johannesson H. Sex-linked transcriptional divergence in the hermaphrodite fungus Neurospora tetrasperma. Proceedings. Biological Sciences / the Royal Society. 280: 20130862. PMID 23782882 DOI: 10.1098/Rspb.2013.0862  0.701
2012 Nygren K, Wallberg A, Samils N, Stajich JE, Townsend JP, Karlsson M, Johannesson H. Analyses of expressed sequence tags in Neurospora reveal rapid evolution of genes associated with the early stages of sexual reproduction in fungi. Bmc Evolutionary Biology. 12: 229. PMID 23186325 DOI: 10.1186/1471-2148-12-229  0.691
2012 Whittle CA, Johannesson H. Neurospora as a model to empirically test central hypotheses in eukaryotic genome evolution: why this fungal genus offers promising opportunities. Bioessays : News and Reviews in Molecular, Cellular and Developmental Biology. 34: 934-7. PMID 22968834 DOI: 10.1002/bies.201200110  0.329
2012 Corcoran P, Jacobson DJ, Bidartondo MI, Hickey PC, Kerekes JF, Taylor JW, Johannesson H. Quantifying functional heterothallism in the pseudohomothallic ascomycete Neurospora tetrasperma. Fungal Biology. 116: 962-75. PMID 22954339 DOI: 10.1016/J.Funbio.2012.06.006  0.452
2012 Sun Y, Corcoran P, Menkis A, Whittle CA, Andersson SG, Johannesson H. Large-scale introgression shapes the evolution of the mating-type chromosomes of the filamentous ascomycete Neurospora tetrasperma. Plos Genetics. 8: e1002820. PMID 22844246 DOI: 10.1371/journal.pgen.1002820  0.326
2012 Wang Z, Kin K, López-Giráldez F, Johannesson H, Townsend JP. Sex-specific gene expression during asexual development of Neurospora crassa. Fungal Genetics and Biology : Fg & B. 49: 533-43. PMID 22626843 DOI: 10.1016/J.Fgb.2012.05.004  0.518
2012 Gioti A, Mushegian AA, Strandberg R, Stajich JE, Johannesson H. Unidirectional evolutionary transitions in fungal mating systems and the role of transposable elements. Molecular Biology and Evolution. 29: 3215-26. PMID 22593224 DOI: 10.1093/Molbev/Mss132  0.588
2012 Menkis A, Burokienė D, Gaitnieks T, Uotila A, Johannesson H, Rosling A, Finlay RD, Stenlid J, Vasaitis R. Occurrence and impact of the root-rot biocontrol agent Phlebiopsis gigantea on soil fungal communities in Picea abies forests of northern Europe. Fems Microbiology Ecology. 81: 438-45. PMID 22443512 DOI: 10.1111/j.1574-6941.2012.01366.x  0.513
2011 Whittle CA, Nygren K, Johannesson H. Consequences of reproductive mode on genome evolution in fungi Fungal Genetics and Biology. 48: 661-667. PMID 21362492 DOI: 10.1016/j.fgb.2011.02.005  0.304
2010 Menkis A, Whittle CA, Johannesson H. Gene genealogies indicates abundant gene conversions and independent evolutionary histories of the mating-type chromosomes in the evolutionary history of Neurospora tetrasperma. Bmc Evolutionary Biology. 10: 234. PMID 20673371 DOI: 10.1186/1471-2148-10-234  0.333
2010 Strandberg R, Nygren K, Menkis A, James TY, Wik L, Stajich JE, Johannesson H. Conflict between reproductive gene trees and species phylogeny among heterothallic and pseudohomothallic members of the filamentous ascomycete genus Neurospora. Fungal Genetics and Biology : Fg & B. 47: 869-78. PMID 20601044 DOI: 10.1016/J.Fgb.2010.06.008  0.695
2009 Menkis A, Bastiaans E, Jacobson DJ, Johannesson H. Phylogenetic and biological species diversity within the Neurospora tetrasperma complex. Journal of Evolutionary Biology. 22: 1923-36. PMID 19682307 DOI: 10.1111/j.1420-9101.2009.01801.x  0.35
2009 James TY, Johansson SB, Johannesson H. Trikaryon formation and nuclear selection in pairings between heterokaryons and homokaryons of the root rot pathogen Heterobasidion parviporum. Mycological Research. 113: 583-90. PMID 19640398 DOI: 10.1016/J.Mycres.2009.01.006  0.536
2008 James TY, Stenlid J, Olson A, Johannesson H. Evolutionary significance of imbalanced nuclear ratios within heterokaryons of the basidiomycete fungus Heterobasidion parviporum. Evolution; International Journal of Organic Evolution. 62: 2279-96. PMID 18637961 DOI: 10.1111/J.1558-5646.2008.00462.X  0.691
2008 Karlsson M, Nygren K, Johannesson H. The evolution of the pheromonal signal system and its potential role for reproductive isolation in heterothallic neurospora. Molecular Biology and Evolution. 25: 168-78. PMID 18024989 DOI: 10.1093/molbev/msm253  0.333
2007 Taylor JW, Turner E, Pringle A, Dettman J, Johannesson H. Fungal species: Thoughts on their recognition, maintenance and selection Fungi in the Environment. 313-339. DOI: 10.1017/CBO9780511541797.016  0.718
2006 Johannesson H, Kasuga T, Schaller RA, Good B, Gardner MJ, Townsend JP, Cole GT, Taylor JW. Phase-specific gene expression underlying morphological adaptations of the dimorphic human pathogenic fungus, Coccidioides posadasii. Fungal Genetics and Biology : Fg & B. 43: 545-59. PMID 16697669 DOI: 10.1016/J.Fgb.2006.02.003  0.713
2005 Johannesson H, Townsend JP, Hung CY, Cole GT, Taylor JW. Concerted evolution in the repeats of an immunomodulating cell surface protein, SOWgp, of the human pathogenic fungi Coccidioides immitis and C. posadasii. Genetics. 171: 109-17. PMID 15965255 DOI: 10.1534/Genetics.105.040923  0.627
2004 Johannesson H, Stenlid J. Nuclear reassortment between vegetative mycelia in natural populations of the basidiomycete Heterobasidion annosum. Fungal Genetics and Biology : Fg & B. 41: 563-70. PMID 15050545 DOI: 10.1016/j.fgb.2004.01.002  0.566
2004 Johannesson H, Vidal P, Guarro J, Herr RA, Cole GT, Taylor JW. Positive directional selection in the proline-rich antigen (PRA) gene among the human pathogenic fungi Coccidioides immitis, C. posadasii and their closest relatives. Molecular Biology and Evolution. 21: 1134-45. PMID 15034131 DOI: 10.1093/Molbev/Msh124  0.51
2003 Johannesson H, Stenlid J. Molecular markers reveal genetic isolation and phylogeography of the S and F intersterility groups of the wood-decay fungus Heterobasidion annosum. Molecular Phylogenetics and Evolution. 29: 94-101. PMID 12967610  0.573
2002 Ihrmark K, Johannesson H, Stenström E, Stenlid J. Transmission of double-stranded RNA in Heterobasidion annosum. Fungal Genetics and Biology : Fg & B. 36: 147-54. PMID 12081468 DOI: 10.1016/S1087-1845(02)00011-7  0.534
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