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Daniel Portik - Publications

Affiliations: 
University of Arizona, Tucson, AZ 
Area:
Evolutionary Biology
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31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Portik DM, Streicher JW, Wiens JJ. Frog phylogeny: A time-calibrated, species-level tree based on hundreds of loci and 5,242 species. Molecular Phylogenetics and Evolution. 188: 107907. PMID 37633542 DOI: 10.1016/j.ympev.2023.107907  0.614
2023 Portik DM, Streicher JW, Blackburn DC, Moen DS, Hutter CR, Wiens JJ. Redefining Possible: Combining Phylogenomic and Supersparse Data in Frogs. Molecular Biology and Evolution. PMID 37140129 DOI: 10.1093/molbev/msad109  0.746
2022 Greenbaum E, Portik DM, Allen KE, Vaughan ER, Badjedjea G, Barej MF, Behangana M, Conkey N, Dumbo B, Gonwouo LN, Hirschfeld M, Hughes DF, Igunzi F, Kusamba C, Lukwago W, et al. Systematics of the Central African Spiny Reed Frog Afrixalus laevis (Anura: Hyperoliidae), with the description of two new species from the Albertine Rift. Zootaxa. 5174: 201-232. PMID 36095401 DOI: 10.11646/zootaxa.5174.3.1  0.47
2022 Tonione MA, Bi K, Dunn RR, Lucky A, Portik DM, Tsutsui ND. Phylogeography and population genetics of a widespread cold-adapted ant, Prenolepis imparis. Molecular Ecology. PMID 35866574 DOI: 10.1111/mec.16624  0.392
2021 Jaynes KE, Myers EA, Gvoždík V, Blackburn DC, Portik DM, Greenbaum E, Jongsma GFM, Rödel MO, Badjedjea G, Bamba-Kaya A, Baptista NL, Akuboy JB, Ernst R, Kouete MT, Kusamba C, et al. Giant Tree Frog diversification in West and Central Africa: isolation by physical barriers, climate, and reproductive traits. Molecular Ecology. PMID 34516675 DOI: 10.1111/mec.16169  0.764
2020 Portik DM, Wiens JJ. Do Alignment and Trimming Methods Matter for Phylogenomic (UCE) Analyses? Systematic Biology. PMID 32797207 DOI: 10.1093/Sysbio/Syaa064  0.557
2020 Portik DM, Blackburn DC, McGuire JA. Macroevolutionary patterns of sexual size dimorphism among African tree frogs (Family: Hyperoliidae). The Journal of Heredity. PMID 32594138 DOI: 10.1093/Jhered/Esaa019  0.661
2020 Brennan IG, Lemmon AR, Lemmon EM, Portik DM, Weijola V, Welton L, Donnellan SC, Keogh JS. Phylogenomics of monitor lizards and the role of competition in dictating body size disparity. Systematic Biology. PMID 32521014 DOI: 10.1093/Sysbio/Syaa046  0.722
2020 Firneno TJ, O'Neill JR, Portik DM, Emery AH, Townsend JH, Fujita MK. Finding complexity in complexes: assessing the causes of mitonuclear discordance in a problematic species complex of Mesoamerican toads. Molecular Ecology. PMID 32500624 DOI: 10.1111/Mec.15496  0.766
2020 Portik DM, Wiens JJ. SuperCRUNCH: A bioinformatics toolkit for creating and manipulating supermatrices and other large phylogenetic datasets Methods in Ecology and Evolution. 11: 763-772. DOI: 10.1111/2041-210X.13392  0.551
2019 Portik DM, Bell RC, Blackburn DC, Bauer AM, Barratt CD, Branch WR, Burger M, Channing A, Colston TJ, Conradie W, Dehling JM, Drewes RC, Ernst R, Greenbaum E, Gvoždík V, et al. Sexual Dichromatism Drives Diversification within a Major Radiation of African Amphibians. Systematic Biology. PMID 31140573 DOI: 10.1093/Sysbio/Syz023  0.715
2019 Leaché AD, Portik DM, Rivera D, Rödel M, Penner J, Gvoždík V, Greenbaum E, Jongsma GFM, Ofori‐Boateng C, Burger M, Eniang EA, Bell RC, Fujita MK. Exploring rain forest diversification using demographic model testing in the African foam‐nest treefrog Chiromantis rufescens Journal of Biogeography. 46: 2706-2721. DOI: 10.1111/Jbi.13716  0.732
2018 Barratt CD, Bwong BA, Jehle R, Liedtke HC, Nagel P, Onstein RE, Portik DM, Streicher JW, Loader SP. Vanishing refuge? Testing the forest refuge hypothesis in coastal East Africa using genome-wide sequence data for seven amphibians. Molecular Ecology. PMID 30193397 DOI: 10.1111/Mec.14862  0.472
2018 Conradie W, Verburgt L, Portik DM, Ohler A, Bwong BA, Lawson LP. A new Reed Frog (Hyperoliidae: Hyperolius) from coastal northeastern Mozambique. Zootaxa. 4379: 177-198. PMID 29689983 DOI: 10.11646/Zootaxa.4379.2.2  0.4
2017 Jongsma GFM, Barej MF, Barratt CD, Burger M, Conradie W, Ernst R, Greenbaum E, Hirschfeld M, Leaché AD, Penner J, Portik DM, Zassi-Boulou AG, Rödel MO, Blackburn DC. Diversity and biogeography of frogs in the genus Amnirana (Anura: Ranidae) across sub-Saharan Africa. Molecular Phylogenetics and Evolution. PMID 29246817 DOI: 10.1016/J.Ympev.2017.12.006  0.733
2017 Bell RC, Parra JL, Badjedjea G, Barej MF, Blackburn DC, Burger M, Channing A, Dehling JM, Greenbaum E, Gvoždík V, Kielgast J, Kusamba C, Lötters S, McLaughlin PJ, Nagy ZT, ... ... Portik DM, et al. Idiosyncratic responses to climate-driven forest fragmentation and marine incursions in reed frogs from Central Africa and the Gulf of Guinea Islands. Molecular Ecology. PMID 28753250 DOI: 10.1111/Mec.14260  0.72
2017 Portik DM, Leaché AD, Rivera D, Barej MF, Burger M, Hirschfeld M, Rödel MO, Blackburn DC, Fujita MK. Evaluating mechanisms of diversification in a Guineo-Congolian tropical forest frog using demographic model selection. Molecular Ecology. PMID 28748565 DOI: 10.1111/Mec.14266  0.71
2017 Bittencourt-Silva GB, Lawson LP, Tolley KA, Portik DM, Barratt CD, Nagel P, Loader SP. Impact of species delimitation and sampling on niche models and phylogeographical inference: A case study of the East African reed frog Hyperolius substriatus Ahl, 1931. Molecular Phylogenetics and Evolution. 114: 261-270. PMID 28684366 DOI: 10.1016/J.Ympev.2017.06.022  0.413
2017 Schield DR, Adams RH, Card DC, Perry BW, Pasquesi GM, Jezkova T, Portik DM, Andrew AL, Spencer CL, Sanchez EE, Fujita MK, Mackessy SP, Castoe TA. Insight into the roles of selection in speciation from genomic patterns of divergence and introgression in secondary contact in venomous rattlesnakes. Ecology and Evolution. 7: 3951-3966. PMID 28616190 DOI: 10.1002/Ece3.2996  0.735
2016 Portik DM, Blackburn DC. The evolution of reproductive diversity in Afrobatrachia: A phylogenetic comparative analysis of an extensive radiation of African frogs. Evolution; International Journal of Organic Evolution. PMID 27402182 DOI: 10.1111/Evo.12997  0.312
2016 Medina MF, Bauer AM, Branch WR, Schmitz A, Conradie W, Nagy ZT, Hibbitts TJ, Ernst R, Portik DM, Nielsen SV, Colston TJ, Kusamba C, Behangana M, Rödel MO, Greenbaum E. Molecular phylogeny of Panaspis and Afroablepharus skinks (Squamata: Scincidae) in the savannas of sub-Saharan Africa. Molecular Phylogenetics and Evolution. 100: 409-23. PMID 27118179 DOI: 10.1016/J.Ympev.2016.04.026  0.779
2015 Evans BJ, Carter TF, Greenbaum E, Gvoždík V, Kelley DB, McLaughlin PJ, Pauwels OS, Portik DM, Stanley EL, Tinsley RC, Tobias ML, Blackburn DC. Genetics, Morphology, Advertisement Calls, and Historical Records Distinguish Six New Polyploid Species of African Clawed Frog (Xenopus, Pipidae) from West and Central Africa. Plos One. 10: e0142823. PMID 26672747 DOI: 10.1371/Journal.Pone.0142823  0.631
2015 Dowell SA, Portik DM, de Buffrénil V, Ineich I, Greenbaum E, Kolokotronis SO, Hekkala ER. Molecular data from contemporary and historical collections reveal a complex story of cryptic diversification in the Varanus (Polydaedalus) niloticus Species Group. Molecular Phylogenetics and Evolution. PMID 26475616 DOI: 10.1016/J.Ympev.2015.10.004  0.435
2015 Portik DM, Papenfuss TJ. Historical biogeography resolves the origins of endemic Arabian toad lineages (Anura: Bufonidae): Evidence for ancient vicariance and dispersal events with the Horn of Africa and South Asia. Bmc Evolutionary Biology. 15: 152. PMID 26245197 DOI: 10.1186/S12862-015-0417-Y  0.449
2015 Loader SP, Lawson LP, Portik DM, Menegon M. Three new species of spiny throated reed frogs (Anura: Hyperoliidae) from evergreen forests of Tanzania. Bmc Research Notes. 8: 167. PMID 25909565 DOI: 10.1186/S13104-015-1050-Y  0.433
2013 Portik DM, Travers SL, Bauer AM, Branch WR. A new species of Lygodactylus (Squamata: Gekkonidae) endemic to Mount Namuli, an isolated 'sky island' of northern Mozambique. Zootaxa. 3710: 415-35. PMID 26106703 DOI: 10.11646/Zootaxa.3710.5.2  0.582
2013 Penner J, Adum GB, McElroy MT, Doherty-Bone T, Hirschfeld M, Sandberger L, Weldon C, Cunningham AA, Ohst T, Wombwell E, Portik DM, Reid D, Hillers A, Ofori-Boateng C, Oduro W, et al. West Africa - a safe haven for frogs? A sub-continental assessment of the chytrid fungus (Batrachochytrium dendrobatidis). Plos One. 8: e56236. PMID 23426141 DOI: 10.1371/journal.pone.0056236  0.434
2012 Portik DM, Papenfuss TJ. Monitors cross the Red Sea: the biogeographic history of Varanus yemenensis. Molecular Phylogenetics and Evolution. 62: 561-5. PMID 22004664 DOI: 10.1016/J.Ympev.2011.09.024  0.419
2011 Portik DM, Bauer AM, Jackman TR. Bridging the gap: western rock skinks (Trachylepis sulcata) have a short history in South Africa. Molecular Ecology. 20: 1744-58. PMID 21371148 DOI: 10.1111/J.1365-294X.2011.05047.X  0.593
2010 Portik DM, Bauer AM, Jackman TR. The phylogenetic affinities of trachylepis sulcata nigra and the intraspecific evolution of coastal melanism in the western rock skink African Zoology. 45: 147-159. DOI: 10.3377/004.045.0217  0.439
2008 Sheil CA, Portik D. Formation and ossification of limb elements in Trachemys scripta and a discussion of autopodial elements in turtles. Zoological Science. 25: 622-41. PMID 18624573 DOI: 10.2108/Zsj.25.622  0.34
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