| Year |
Citation |
Score |
| 2024 |
Corominas M, Marquès-Bonet T, Arnedo MA, Bayés M, Belmonte J, Escrivà H, Fernández R, Gabaldón T, Garnatje T, Germain J, Niell M, Palero F, Pons J, Puigdomènech P, Initiative For The Earth BioGenome Project TC, et al. The Catalan initiative for the Earth BioGenome Project: contributing local data to global biodiversity genomics. Nar Genomics and Bioinformatics. 6: lqae075. PMID 39022326 DOI: 10.1093/nargab/lqae075 |
0.369 |
|
| 2023 |
Cruz F, Gómez-Garrido J, Gut M, Alioto TS, Pons J, Alós J, Barcelo-Serra M. Chromosome-level assembly and annotation of the Xyrichtys novacula (Linnaeus, 1758) genome. Dna Research : An International Journal For Rapid Publication of Reports On Genes and Genomes. 30. PMID 37797305 DOI: 10.1093/dnares/dsad021 |
0.354 |
|
| 2021 |
Cucini C, Leo C, Iannotti N, Boschi S, Brunetti C, Pons J, Fanciulli PP, Frati F, Carapelli A, Nardi F. EZmito: a simple and fast tool for multiple mitogenome analyses. Mitochondrial Dna. Part B, Resources. 6: 1101-1109. PMID 33796755 DOI: 10.1080/23802359.2021.1899865 |
0.335 |
|
| 2021 |
Sun Y, Daffe G, Zhang Y, Pons J, Qiu JW, Kupriyanova EK. Another blow to the conserved gene order in Annelida: evidence from mitochondrial genomes of the calcareous tubeworm genus Hydroides. Molecular Phylogenetics and Evolution. 107124. PMID 33610649 DOI: 10.1016/j.ympev.2021.107124 |
0.313 |
|
| 2021 |
Zapelloni F, Pons J, Jurado-Rivera JA, Jaume D, Juan C. Phylogenomics of the Hyalella amphipod species-flock of the Andean Altiplano. Scientific Reports. 11: 366. PMID 33431936 DOI: 10.1038/s41598-020-79620-4 |
0.409 |
|
| 2020 |
Barcelo-Serra M, Pons J, Viver T, Rosselló-Mora R, Alós J. Complete mitochondrial genome of the pearly razorfish phylogenetic analysis of its placement within the Labridae family. Mitochondrial Dna. Part B, Resources. 5: 644-645. PMID 33366684 DOI: 10.1080/23802359.2019.1711226 |
0.499 |
|
| 2020 |
Narakusumo RP, Riedel A, Pons J. Mitochondrial genomes of twelve species of hyperdiverse weevils. Peerj. 8: e10017. PMID 33083123 DOI: 10.7717/peerj.10017 |
0.36 |
|
| 2020 |
González-Castellano I, Pons J, González-Ortegón E, Martínez-Lage A. Mitogenome phylogenetics in the genus Palaemon (Crustacea: Decapoda) sheds light on species crypticism in the rockpool shrimp P. elegans. Plos One. 15. PMID 32810189 DOI: 10.1371/Journal.Pone.0237037 |
0.498 |
|
| 2020 |
Jurado-Rivera JA, Zapelloni F, Pons J, Juan C, Jaume D. Morphological and molecular species boundaries in the Hyalella species flock of Lake Titicaca (Crustacea: Amphipoda) Contributions to Zoology. 353-372. DOI: 10.1163/18759866-Bja10004 |
0.445 |
|
| 2019 |
Pons J, Jurado-Rivera JA, Jaume D, Vonk R, Bauzà-Ribot MM, Juan C. The age and diversification of Metacrangonyctid subterranean amphipod crustaceans revisited. Molecular Phylogenetics and Evolution. 106599. PMID 31442496 DOI: 10.1016/J.Ympev.2019.106599 |
0.371 |
|
| 2019 |
Pons J, Bover P, Bidegaray-Batista L, Arnedo MA. Arm-less mitochondrial tRNAs conserved for over 30 millions of years in spiders. Bmc Genomics. 20: 665. PMID 31438844 DOI: 10.1186/S12864-019-6026-1 |
0.446 |
|
| 2019 |
Bover P, Mitchell KJ, Torres‐Roig E, Llamas B, Thomson VA, Alcover JA, Agustí J, Cooper A, Pons J. Ancient DNA from an extinct Mediterranean micromammal—
Hypnomys morpheus
(Rodentia: Gliridae)—Provides insight into the biogeographic history of insular dormice Journal of Zoological Systematics and Evolutionary Research. 58: 427-438. DOI: 10.1111/Jzs.12343 |
0.301 |
|
| 2019 |
Bover P, Llamas B, Mitchell KJ, Thomson VA, Alcover JA, Lalueza-Fox C, Cooper A, Pons J. Unraveling the phylogenetic relationships of the extinct bovid Myotragus balearicus Bate 1909 from the Balearic Islands Quaternary Science Reviews. 215: 185-195. DOI: 10.1016/J.Quascirev.2019.05.005 |
0.465 |
|
| 2018 |
Bover P, Llamas B, Thomson VA, Pons J, Cooper A, Mitchell KJ. Molecular resolution to a morphological controversy: the case of North American fossil muskoxen Bootherium and Symbos. Molecular Phylogenetics and Evolution. PMID 30121342 DOI: 10.1016/J.Ympev.2018.08.008 |
0.475 |
|
| 2018 |
Stokkan M, Jurado-Rivera JA, Oromí P, Juan C, Jaume D, Pons J. Species delimitation and mitogenome phylogenetics in the subterranean genus Pseudoniphargus (Crustacea: Amphipoda). Molecular Phylogenetics and Evolution. PMID 30004011 DOI: 10.1016/J.Ympev.2018.07.002 |
0.495 |
|
| 2018 |
Nygren A, Parapar J, Pons J, Meißner K, Bakken T, Kongsrud JA, Oug E, Gaeva D, Sikorski A, Johansen RA, Hutchings PA, Lavesque N, Capa M. A mega-cryptic species complex hidden among one of the most common annelids in the North East Atlantic. Plos One. 13: e0198356. PMID 29924805 DOI: 10.1371/Journal.Pone.0198356 |
0.459 |
|
| 2018 |
Bover P, Mitchell KJ, Llamas B, Rofes J, Thomson VA, Cuenca-Bescós G, Alcover JA, Cooper A, Pons J. Molecular phylogenetics supports the origin of an endemic Balearic shrew lineage (Nesiotites) coincident with the Messinian Salinity Crisis. Molecular Phylogenetics and Evolution. PMID 29608962 DOI: 10.1016/J.Ympev.2018.03.028 |
0.487 |
|
| 2017 |
Jurado-Rivera JA, Pons J, Alvarez F, Botello A, Humphreys WF, Page TJ, Iliffe TM, Willassen E, Meland K, Juan C, Jaume D. Phylogenetic evidence that both ancient vicariance and dispersal have contributed to the biogeographic patterns of anchialine cave shrimps. Scientific Reports. 7: 2852. PMID 28588246 DOI: 10.1038/S41598-017-03107-Y |
0.429 |
|
| 2017 |
Jurado-Rivera JA, Álvarez G, Caro JA, Juan C, Pons J, Jaume D. Molecular systematics of Haploginglymus, a genus of subterranean amphipods endemic to the Iberian Peninsula (Amphipoda: Niphargidae) Contributions to Zoology. 86: 239-260. DOI: 10.1163/18759866-08603004 |
0.333 |
|
| 2016 |
Jurado-Rivera JA, Jaume D, Juan C, Pons J. The complete mitochondrial genome of the cave shrimp Typhlatya miravetensis (Decapoda, Atyidae) and its systematic position Mitochondrial Dna Part B. 1: 847-848. PMID 33473652 DOI: 10.1080/23802359.2016.1238756 |
0.395 |
|
| 2016 |
Juan C, Jurado-Rivera JA, Moreno E, Wolff C, Jaume D, Pons J. The mitogenome of the amphipod (Crustacea) and its phylogenetic placement. Mitochondrial Dna. Part B, Resources. 1: 755-756. PMID 33473616 DOI: 10.1080/23802359.2016.1214554 |
0.374 |
|
| 2016 |
Bover P, Valenzuela A, Torres E, Cooper A, Pons J, Alcover JA. Closing the gap: New data on the last documented Myotragus and the first human evidence on Mallorca (Balearic Islands, Western Mediterranean Sea): The Holocene. 26: 1887-1891. DOI: 10.1177/0959683616645945 |
0.341 |
|
| 2016 |
Cánovas F, Jurado-Rivera JA, Cerro-Gálvez E, Juan C, Jaume D, Pons J. DNA barcodes, cryptic diversity and phylogeography of a W Mediterranean assemblage of thermosbaenacean crustaceans Zoologica Scripta. 45: 659-670. DOI: 10.1111/Zsc.12173 |
0.512 |
|
| 2016 |
Riedel A, Tänzler R, Pons J, Suhardjono YR, Balke M. Large-scale molecular phylogeny of Cryptorhynchinae (Coleoptera, Curculionidae) from multiple genes suggests American origin and later Australian radiation Systematic Entomology. 41: 492-503. DOI: 10.1111/Syen.12170 |
0.492 |
|
| 2015 |
Stokkan M, Jurado-Rivera JA, Juan C, Jaume D, Pons J. Mitochondrial genome rearrangements at low taxonomic levels: three distinct mitogenome gene orders in the genus Pseudoniphargus (Crustacea: Amphipoda). Mitochondrial Dna. 1-11. PMID 26329687 DOI: 10.3109/19401736.2015.1079821 |
0.405 |
|
| 2014 |
Pons J, Bauzà-Ribot MM, Jaume D, Juan C. Next-generation sequencing, phylogenetic signal and comparative mitogenomic analyses in Metacrangonyctidae (Amphipoda: Crustacea). Bmc Genomics. 15: 566. PMID 24997985 DOI: 10.1186/1471-2164-15-566 |
0.509 |
|
| 2014 |
Toussaint EF, Hall R, Monaghan MT, Sagata K, Ibalim S, Shaverdo HV, Vogler AP, Pons J, Balke M. The towering orogeny of New Guinea as a trigger for arthropod megadiversity. Nature Communications. 5: 4001. PMID 24874774 DOI: 10.1038/Ncomms5001 |
0.343 |
|
| 2013 |
Botello A, Iliffe TM, Alvarez F, Juan C, Pons J, Jaume D. Historical biogeography and phylogeny of Typhlatya cave shrimps (Decapoda: Atyidae) based on mitochondrial and nuclear data Journal of Biogeography. 40: 594-607. DOI: 10.1111/Jbi.12020 |
0.351 |
|
| 2012 |
Bauzà-Ribot MM, Juan C, Nardi F, Oromí P, Pons J, Jaume D. Mitogenomic phylogenetic analysis supports continental-scale vicariance in subterranean thalassoid crustaceans. Current Biology : Cb. 22: 2069-74. PMID 23063439 DOI: 10.1016/J.Cub.2012.09.012 |
0.543 |
|
| 2011 |
Bauzà-Ribot MM, Jaume D, Fornós JJ, Juan C, Pons J. Islands beneath islands: phylogeography of a groundwater amphipod crustacean in the Balearic archipelago. Bmc Evolutionary Biology. 11: 221. PMID 21791038 DOI: 10.1186/1471-2148-11-221 |
0.464 |
|
| 2011 |
Pons J, Fujisawa T, Claridge EM, Savill RA, Barraclough TG, Vogler AP. Deep mtDNA subdivision within Linnean species in an endemic radiation of tiger beetles from New Zealand (genus Neocicindela). Molecular Phylogenetics and Evolution. 59: 251-62. PMID 21338699 DOI: 10.1016/J.Ympev.2011.02.013 |
0.484 |
|
| 2010 |
Hendrich L, Pons J, Ribera I, Balke M. Mitochondrial Cox1 Sequence Data Reliably Uncover Patterns of Insect Diversity But Suffer from High Lineage-Idiosyncratic Error Rates Plos One. 5. PMID 21203427 DOI: 10.1371/Journal.Pone.0014448 |
0.516 |
|
| 2010 |
Timmermans MJ, Dodsworth S, Culverwell CL, Bocak L, Ahrens D, Littlewood DT, Pons J, Vogler AP. Why barcode? High-throughput multiplex sequencing of mitochondrial genomes for molecular systematics. Nucleic Acids Research. 38: e197. PMID 20876691 DOI: 10.1093/Nar/Gkq807 |
0.507 |
|
| 2010 |
Pons J, Ribera I, Bertranpetit J, Balke M. Nucleotide substitution rates for the full set of mitochondrial protein-coding genes in Coleoptera Molecular Phylogenetics and Evolution. 56: 796-807. PMID 20152911 DOI: 10.1016/J.Ympev.2010.02.007 |
0.39 |
|
| 2009 |
Bauza-Ribot MM, Jaume D, Juan C, Pons J. The complete mitochondrial genome of the subterranean crustacean Metacrangonyx longipes (Amphipoda): a unique gene order and extremely short control region. Mitochondrial Dna. 20: 88-99. PMID 19513930 DOI: 10.1080/19401730902964417 |
0.44 |
|
| 2007 |
Balke M, Pons J, Ribera I, Sagata K, Vogler AP. Infrequent and unidirectional colonization of hyperdiverse Papuadytes diving beetles in New Caledonia and New Guinea. Molecular Phylogenetics and Evolution. 42: 505-16. PMID 16979911 DOI: 10.1016/J.Ympev.2006.07.019 |
0.47 |
|
| 2006 |
Pons J, Barraclough TG, Gomez-Zurita J, Cardoso A, Duran DP, Hazell S, Kamoun S, Sumlin WD, Vogler AP. Sequence-based species delimitation for the DNA taxonomy of undescribed insects. Systematic Biology. 55: 595-609. PMID 16967577 DOI: 10.1080/10635150600852011 |
0.753 |
|
| 2006 |
Monaghan MT, Balke M, Pons J, Vogler AP. Beyond barcodes: complex DNA taxonomy of a South Pacific Island radiation. Proceedings. Biological Sciences / the Royal Society. 273: 887-93. PMID 16618684 DOI: 10.1098/Rspb.2005.3391 |
0.573 |
|
| 2006 |
Pons J. DNA‐based identification of preys from non‐destructive, total DNA extractions of predators using arthropod universal primers Molecular Ecology Notes. 6: 623-626. DOI: 10.1111/J.1471-8286.2006.01353.X |
0.494 |
|
| 2006 |
Pons J, Vogler AP. Size, frequency, and phylogenetic signal of multiple-residue indels in sequence alignment of introns Cladistics. 22: 144-156. DOI: 10.1111/J.1096-0031.2006.00088.X |
0.39 |
|
| 2005 |
Pons J, Vogler AP. Complex Pattern of Coalescence and Fast Evolution of a Mitochondrial rRNA Pseudogene in a Recent Radiation of Tiger Beetles Molecular Biology and Evolution. 22: 991-1000. PMID 15647517 DOI: 10.1093/Molbev/Msi085 |
0.515 |
|
| 2004 |
Pons J, Gillespie RG. Evolution of satellite DNAs in a radiation of endemic Hawaiian spiders: does concerted evolution of highly repetitive sequences reflect evolutionary history? Journal of Molecular Evolution. 59: 632-41. PMID 15693619 DOI: 10.1007/S00239-004-2655-2 |
0.583 |
|
| 2004 |
Pons J, Barraclough TG, Theodorides K, Cardoso A, Vogler AP. Using exon and intron sequences of the gene Mp20 to resolve basal relationships in Cicindela (Coleoptera:Cicindelidae). Systematic Biology. 53: 554-570. PMID 15371246 DOI: 10.1080/10635150490472940 |
0.522 |
|
| 2004 |
Pons J. Cloning and characterization of a transposable-like repeat in the heterochromatin of the darkling beetle Misolampus goudoti. Genome. 47: 769-774. PMID 15284883 DOI: 10.1139/G04-019 |
0.422 |
|
| 2004 |
Pons J, Bruvo B, Petitpierre E, Plohl M, Ugarkovic D, Juan C. Complex structural features of satellite DNA sequences in the genus Pimelia (Coleoptera: Tenebrionidae): Random differential amplification from a common 'satellite DNA library' Heredity. 92: 418-427. PMID 14997181 DOI: 10.1038/Sj.Hdy.6800436 |
0.742 |
|
| 2004 |
Gómez-Zurita J, Pons J, Petitpierre E. The evolutionary origin of a novel karyotype in Timarcha (Coleoptera, Chrysomelidae) and general trends of chromosome evolution in the genus Journal of Zoological Systematics and Evolutionary Research. 42: 332-341. DOI: 10.1111/J.1439-0469.2004.00267.X |
0.597 |
|
| 2004 |
Pons J. Evolution of diploid chromosome number, sex‐determining systems, and heterochromatin in Western Mediterranean and Canarian species of the genus Pimelia (Coleoptera: Tenebrionidae) Journal of Zoological Systematics and Evolutionary Research. 42: 81-85. DOI: 10.1046/J.1439-0469.2003.00247.X |
0.47 |
|
| 2003 |
Pons J, Bucur R, Vogler AP. Higher-order repeats in the satellite DNA of the cave beetle Pholeuon proserpinae glaciale (Coleoptera: Cholevidae) Hereditas. 139: 28-34. PMID 14641470 DOI: 10.1111/J.1601-5223.2003.01760.X |
0.484 |
|
| 2003 |
Pons J, Gillespie RG. Common origin of the satellite DNAs of the Hawaiian spiders of the genus Tetragnatha: evolutionary constraints on the length and nucleotide composition of the repeats. Gene. 313: 169-77. PMID 12957388 DOI: 10.1016/S0378-1119(03)00676-0 |
0.558 |
|
| 2003 |
Bruvo B, Pons J, Ugarković D, Juan C, Petitpierre E, Plohl M. Evolution of low-copy number and major satellite DNA sequences coexisting in two Pimelia species-groups (Coleoptera). Gene. 312: 85-94. PMID 12909343 DOI: 10.1016/S0378-1119(03)00603-6 |
0.74 |
|
| 2003 |
Palmer M, Petitpierre E, Pons J. Test of the correlation between body size and DNA content in Pimelia (Coleoptera: Tenebrionidae) from the Canary Islands European Journal of Endocrinology. 100: 123-129. DOI: 10.14411/Eje.2003.022 |
0.684 |
|
| 2002 |
Pons J, Petitpierre E, Juan C. Evolutionary dynamics of satellite DNA family PIM357 in species of the genus Pimelia (Tenebrionidae, Coleoptera). Molecular Biology and Evolution. 19: 1329-40. PMID 12140245 DOI: 10.1093/Oxfordjournals.Molbev.A004194 |
0.737 |
|
| 1997 |
Pons J, Bruvo B, Juan C, Petitpierre E, Plohl M, Ugarković U. Conservation of satellite DNA in species of the genus Pimelia (Tenebrionidae, Coleoptera) Gene. 205: 183-190. PMID 9461393 DOI: 10.1016/S0378-1119(97)00402-2 |
0.731 |
|
| 1997 |
Barceló F, Pons J, Petitpierre E, Barjau I, Portugal J. Polymorphic curvature of satellite DNA in three subspecies of the beetle Pimelia sparsa. European Journal of Biochemistry / Febs. 244: 318-24. PMID 9118996 DOI: 10.1111/J.1432-1033.1997.00318.X |
0.701 |
|
| 1993 |
Juan C, Pons J, Petitpierre E. Localization of tandemly repeated DNA sequences in beetle chromosomes by fluorescent in situ hybridization Chromosome Research. 1: 167-174. PMID 8156155 DOI: 10.1007/Bf00710770 |
0.675 |
|
| 1993 |
Pons J, Petitpierre E, Juan C. Characterization of the heterochromatin of the darkling beetle Misolampus goudoti: Cloning of two satellite DNA families and digestion of chromosomes with restriction enzymes Hereditas. 119: 179-185. PMID 8106263 DOI: 10.1111/J.1601-5223.1993.00179.X |
0.688 |
|
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