Philipp Engel, PhD - Publications

Affiliations: 
Université de Lausanne, Lausanne, VD, Switzerland 

58 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Quinn A, El Chazli Y, Escrig S, Daraspe J, Neuschwander N, McNally A, Genoud C, Meibom A, Engel P. Host-derived organic acids enable gut colonization of the honey bee symbiont Snodgrassella alvi. Nature Microbiology. PMID 38225461 DOI: 10.1038/s41564-023-01572-y  0.389
2023 Baud GLC, Prasad A, Ellegaard KM, Engel P. Turnover of strain-level diversity modulates functional traits in the honeybee gut microbiome between nurses and foragers. Genome Biology. 24: 283. PMID 38066630 DOI: 10.1186/s13059-023-03131-4  0.632
2023 Burz SD, Causevic S, Dal Co A, Dmitrijeva M, Engel P, Garrido-Sanz D, Greub G, Hapfelmeier S, Hardt W-D, Hatzimanikatis V, Heiman CM, Herzog MK-M, Hockenberry A, Keel C, Keppler A, et al. From microbiome composition to functional engineering, one step at a time. Microbiology and Molecular Biology Reviews : Mmbr. e0006323. PMID 37947420 DOI: 10.1128/mmbr.00063-23  0.339
2023 Botero J, Sombolestani AS, Cnockaert M, Peeters C, Borremans W, De Vuyst L, Vereecken NJ, Michez D, Smagghe G, Bonilla-Rosso G, Engel P, Vandamme P. A phylogenomic and comparative genomic analysis of Commensalibacter, a versatile insect symbiont. Animal Microbiome. 5: 25. PMID 37120592 DOI: 10.1186/s42523-023-00248-6  0.397
2023 Schmidt K, Santos-Matos G, Leopold-Messer S, El Chazli Y, Emery O, Steiner T, Piel J, Engel P. Integration host factor regulates colonization factors in the bee gut symbiont . Elife. 12. PMID 37057993 DOI: 10.7554/eLife.76182  0.386
2023 Sarton-Lohéac G, Nunes da Silva CG, Mazel F, Baud G, de Bakker V, Das S, El Chazli Y, Ellegaard K, Garcia-Garcera M, Glover N, Liberti J, Nacif Marçal L, Prasad A, Somerville V, Bonilla-Rosso G, ... Engel P, et al. Deep Divergence and Genomic Diversification of Gut Symbionts of Neotropical Stingless Bees. Mbio. e0353822. PMID 36939321 DOI: 10.1128/mbio.03538-22  0.712
2022 Somerville V, Schowing T, Chabas H, Schmidt RS, von Ah U, Bruggmann R, Engel P. Extensive diversity and rapid turnover of phage defense repertoires in cheese-associated bacterial communities. Microbiome. 10: 137. PMID 36028909 DOI: 10.1186/s40168-022-01328-6  0.442
2022 Brochet S, Quinn A, Mars RAT, Neuschwander N, Sauer U, Engel P. Correction: Niche partitioning facilitates coexistence of closely related honey bee gut bacteria. Elife. 11. PMID 35363139 DOI: 10.7554/eLife.78825  0.312
2022 Almasri H, Liberti J, Brunet JL, Engel P, Belzunces LP. Mild chronic exposure to pesticides alters physiological markers of honey bee health without perturbing the core gut microbiota. Scientific Reports. 12: 4281. PMID 35277551 DOI: 10.1038/s41598-022-08009-2  0.337
2021 Somerville V, Berthoud H, Schmidt RS, Bachmann HP, Meng YH, Fuchsmann P, von Ah U, Engel P. Functional strain redundancy and persistent phage infection in Swiss hard cheese starter cultures. The Isme Journal. PMID 34363005 DOI: 10.1038/s41396-021-01071-0  0.373
2021 Brochet S, Quinn A, Mars RA, Neuschwander N, Sauer U, Engel P. Niche partitioning facilitates coexistence of closely related honey bee gut bacteria. Elife. 10. PMID 34279218 DOI: 10.7554/eLife.68583  0.41
2021 Schmidt K, Engel P. Mechanisms underlying gut microbiota-host interactions in insects. The Journal of Experimental Biology. 224. PMID 33509844 DOI: 10.1242/jeb.207696  0.428
2020 Ellegaard KM, Suenami S, Miyazaki R, Engel P. Vast Differences in Strain-Level Diversity in the Gut Microbiota of Two Closely Related Honey Bee Species. Current Biology : Cb. 30: 2520-2531.e7. PMID 32531278 DOI: 10.1016/J.Cub.2020.04.070  0.59
2020 Ke W, Bonilla-Rosso G, Engel P, Wang P, Chen F, Hu X. Suppression of High-Fat Diet-Induced Obesity by Platycodon Grandiflorus in Mice Is Linked to Changes in the Gut Microbiota. The Journal of Nutrition. PMID 32510156 DOI: 10.1093/Jn/Nxaa159  0.327
2020 Bonilla-Rosso G, Steiner T, Wichmann F, Bexkens E, Engel P. Honey bees harbor a diverse gut virome engaging in nested strain-level interactions with the microbiota. Proceedings of the National Academy of Sciences of the United States of America. PMID 32179689 DOI: 10.1073/Pnas.2000228117  0.55
2020 Liberti J, Engel P. The gut microbiota - brain axis of insects. Current Opinion in Insect Science. 39: 6-13. PMID 32078985 DOI: 10.1016/J.Cois.2020.01.004  0.404
2019 Kešnerová L, Emery O, Troilo M, Liberti J, Erkosar B, Engel P. Gut microbiota structure differs between honeybees in winter and summer. The Isme Journal. PMID 31836840 DOI: 10.1038/S41396-019-0568-8  0.438
2019 Szenteczki MA, Pitteloud C, Casacci LP, Kešnerová L, Whitaker MRL, Engel P, Vila R, Alvarez N. Bacterial communities within caterpillars are shifted following transition from solitary living to social parasitism of ant colonies. Ecology and Evolution. 9: 4452-4464. PMID 31031919 DOI: 10.1002/Ece3.5010  0.503
2019 Ellegaard KM, Brochet S, Bonilla-Rosso G, Emery O, Glover N, Hadadi N, Jaron KS, van der Meer JR, Robinson-Rechavi M, Sentchilo V, Tagini F, Engel P. Genomic changes underlying host specialization in the bee gut symbiont Lactobacillus Firm5. Molecular Ecology. 28: 2224-2237. PMID 30864192 DOI: 10.1111/Mec.15075  0.529
2019 Ellegaard KM, Engel P. Genomic diversity landscape of the honey bee gut microbiota. Nature Communications. 10: 446. PMID 30683856 DOI: 10.1038/S41467-019-08303-0  0.508
2019 Bernasconi E, Das S, Koutsokera A, Wurlod D, Bonilla-Rosso G, Aubert J, Derkenne M, Mercier L, Pattaroni C, Rapin A, Marsland BJ, Engel P, Nicod LP. Late Breaking Abstract - Disturbance of the core microbiota in transplanted lung associates with sub- or excessive control of host immunity European Respiratory Journal. 54. DOI: 10.1183/13993003.Congress-2019.Pa4121  0.363
2018 Ellegaard KM, Engel P. New Reference Genome Sequences for 17 Bacterial Strains of the Honey Bee Gut Microbiota. Microbiology Resource Announcements. 7. PMID 30533872 DOI: 10.1128/MRA.00834-18  0.343
2018 Jones JC, Fruciano C, Marchant J, Hildebrand F, Forslund S, Bork P, Engel P, Hughes WOH. The gut microbiome is associated with behavioural task in honey bees. Insectes Sociaux. 65: 419-429. PMID 30100619 DOI: 10.1007/S00040-018-0624-9  0.429
2018 Hu Y, Sanders JG, Łukasik P, D'Amelio CL, Millar JS, Vann DR, Lan Y, Newton JA, Schotanus M, Kronauer DJC, Pierce NE, Moreau CS, Wertz JT, Engel P, Russell JA. Author Correction: Herbivorous turtle ants obtain essential nutrients from a conserved nitrogen-recycling gut microbiome. Nature Communications. 9: 2440. PMID 29921959 DOI: 10.1038/S41467-018-04935-W  0.489
2018 Hu Y, Sanders JG, Łukasik P, D'Amelio CL, Millar JS, Vann DR, Lan Y, Newton JA, Schotanus M, Kronauer DJC, Pierce NE, Moreau CS, Wertz JT, Engel P, Russell JA. Herbivorous turtle ants obtain essential nutrients from a conserved nitrogen-recycling gut microbiome. Nature Communications. 9: 964. PMID 29511180 DOI: 10.1038/S41467-018-03357-Y  0.61
2018 Jones JC, Fruciano C, Hildebrand F, Al Toufalilia H, Balfour NJ, Bork P, Engel P, Ratnieks FL, Hughes WO. Gut microbiota composition is associated with environmental landscape in honey bees. Ecology and Evolution. 8: 441-451. PMID 29321884 DOI: 10.1002/Ece3.3597  0.552
2018 Bonilla-Rosso G, Engel P. Functional roles and metabolic niches in the honey bee gut microbiota. Current Opinion in Microbiology. 43: 69-76. PMID 29309997 DOI: 10.1016/J.Mib.2017.12.009  0.508
2017 Kešnerová L, Mars RAT, Ellegaard KM, Troilo M, Sauer U, Engel P. Disentangling metabolic functions of bacteria in the honey bee gut. Plos Biology. 15: e2003467. PMID 29232373 DOI: 10.1371/Journal.Pbio.2003467  0.496
2017 Tamarit D, Neuvonen MM, Engel P, Guy L, Andersson SGE. Origin and Evolution of the Bartonella Gene Transfer Agent. Molecular Biology and Evolution. PMID 29161442 DOI: 10.1093/Molbev/Msx299  0.444
2017 Harms A, Liesch M, Körner J, Québatte M, Engel P, Dehio C. A bacterial toxin-antitoxin module is the origin of inter-bacterial and inter-kingdom effectors of Bartonella. Plos Genetics. 13: e1007077. PMID 29073136 DOI: 10.1371/Journal.Pgen.1007077  0.416
2017 Harms A, Segers FH, Quebatte M, Mistl C, Manfredi P, Körner J, Chomel BB, Kosoy M, Maruyama S, Engel P, Dehio C. Evolutionary dynamics of pathoadaptation revealed by three independent acquisitions of the VirB/D4 type IV secretion system in Bartonella. Genome Biology and Evolution. PMID 28338931 DOI: 10.1093/Gbe/Evx042  0.47
2017 Segers FH, Kešnerová L, Kosoy M, Engel P. Genomic changes associated with the evolutionary transition of an insect gut symbiont into a blood-borne pathogen. The Isme Journal. PMID 28234349 DOI: 10.1038/Ismej.2016.201  0.53
2017 Emery O, Schmidt K, Engel P. Immune system stimulation by the gut symbiont Frischella perrara in the honey bee (Apis mellifera). Molecular Ecology. PMID 28207182 DOI: 10.1111/Mec.14058  0.473
2016 Powell JE, Leonard SP, Kwong WK, Engel P, Moran NA. Genome-wide screen identifies host colonization determinants in a bacterial gut symbiont. Proceedings of the National Academy of Sciences of the United States of America. PMID 27849596 DOI: 10.1073/pnas.1610856113  0.621
2016 Zheng H, Nishida A, Kwong WK, Koch H, Engel P, Steele MI, Moran NA. Metabolism of Toxic Sugars by Strains of the Bee Gut Symbiont Gilliamella apicola. Mbio. 7. PMID 27803186 DOI: 10.1128/Mbio.01326-16  0.599
2016 Ellegaard KM, Engel P. Beyond 16S rRNA Community Profiling: Intra-Species Diversity in the Gut Microbiota. Frontiers in Microbiology. 7: 1475. PMID 27708630 DOI: 10.3389/Fmicb.2016.01475  0.583
2016 Schmidt K, Engel P. Probiotic Treatment with a Gut Symbiont Leads to Parasite Susceptibility in Honey Bees. Trends in Parasitology. PMID 27697444 DOI: 10.1016/J.Pt.2016.09.005  0.422
2016 Engel P, Kwong WK, McFrederick Q, Anderson KE, Barribeau SM, Chandler JA, Cornman RS, Dainat J, de Miranda JR, Doublet V, Emery O, Evans JD, Farinelli L, Flenniken ML, Granberg F, et al. The Bee Microbiome: Impact on Bee Health and Model for Evolution and Ecology of Host-Microbe Interactions. Mbio. 7. PMID 27118586 DOI: 10.1128/Mbio.02164-15  0.748
2015 Kešnerová L, Moritz R, Engel P. Bartonella apis sp. nov., a honey bee gut symbiont of the class Alphaproteobacteria. International Journal of Systematic and Evolutionary Microbiology. PMID 26537852 DOI: 10.1099/Ijsem.0.000736  0.406
2015 Pérez-Carmona N, Farré D, Martínez-Vicente P, Terhorst C, Engel P, Angulo A. SLAM family receptor homologs in New World monkey cytomegaloviruses. Journal of Virology. PMID 26339044 DOI: 10.1128/JVI.01296-15  0.315
2015 Engel P, Bartlett KD, Moran NA. The Bacterium Frischella perrara Causes Scab Formation in the Gut of its Honeybee Host. Mbio. 6: e00193-15. PMID 25991680 DOI: 10.1128/Mbio.00193-15  0.669
2015 Engel P, Vizcaino MI, Crawford JM. Gut symbionts from distinct hosts exhibit genotoxic activity via divergent colibactin biosynthesis pathways. Applied and Environmental Microbiology. 81: 1502-12. PMID 25527542 DOI: 10.1128/Aem.03283-14  0.454
2014 Engel P, Stepanauskas R, Moran NA. Hidden diversity in honey bee gut symbionts detected by single-cell genomics. Plos Genetics. 10: e1004596. PMID 25210772 DOI: 10.1371/Journal.Pgen.1004596  0.683
2014 Kwong WK, Engel P, Koch H, Moran NA. Genomics and host specialization of honey bee and bumble bee gut symbionts. Proceedings of the National Academy of Sciences of the United States of America. 111: 11509-14. PMID 25053814 DOI: 10.1073/Pnas.1405838111  0.665
2014 Vizcaino MI, Engel P, Trautman E, Crawford JM. Comparative metabolomics and structural characterizations illuminate colibactin pathway-dependent small molecules. Journal of the American Chemical Society. 136: 9244-7. PMID 24932672 DOI: 10.1021/Ja503450Q  0.303
2013 Sloan DB, Bennett GM, Engel P, Williams D, Ochman H. Disentangling associated genomes. Methods in Enzymology. 531: 445-64. PMID 24060132 DOI: 10.1016/B978-0-12-407863-5.00020-4  0.695
2013 Engel P, Moran NA. The gut microbiota of insects - diversity in structure and function. Fems Microbiology Reviews. 37: 699-735. PMID 23692388 DOI: 10.1111/1574-6976.12025  0.683
2013 Engel P, Kwong WK, Moran NA. Frischella perrara gen. nov., sp. nov., a gammaproteobacterium isolated from the gut of the honeybee, Apis mellifera. International Journal of Systematic and Evolutionary Microbiology. 63: 3646-51. PMID 23606484 DOI: 10.1099/Ijs.0.049569-0  0.554
2013 Engel P, Moran NA. Functional and evolutionary insights into the simple yet specific gut microbiota of the honey bee from metagenomic analysis. Gut Microbes. 4: 60-5. PMID 23060052 DOI: 10.4161/Gmic.22517  0.687
2013 Engel P, James RR, Koga R, Kwong WK, McFrederick QS, Moran NA. Standard methods for research on Apis mellifera gut symbionts Journal of Apicultural Research. 52. DOI: 10.3896/Ibra.1.52.4.07  0.613
2013 Engel P, Moran NA. Functional and evolutionary insights into the simple yet specific gut microbiota of the honey bee from metagenomic analysis Gut Microbes. 4.  0.575
2012 Engel P, Martinson VG, Moran NA. Functional diversity within the simple gut microbiota of the honey bee. Proceedings of the National Academy of Sciences of the United States of America. 109: 11002-7. PMID 22711827 DOI: 10.1073/Pnas.1202970109  0.775
2012 Engel P, Angulo A. Viral immunomodulatory proteins: usurping host genes as a survival strategy. Advances in Experimental Medicine and Biology. 738: 256-76. PMID 22399384 DOI: 10.1007/978-1-4614-1680-7_15  0.307
2011 Engel P, Salzburger W, Liesch M, Chang CC, Maruyama S, Lanz C, Calteau A, Lajus A, Médigue C, Schuster SC, Dehio C. Parallel evolution of a type IV secretion system in radiating lineages of the host-restricted bacterial pathogen Bartonella. Plos Genetics. 7: e1001296. PMID 21347280 DOI: 10.1371/Journal.Pgen.1001296  0.444
2010 Vayssier-Taussat M, Le Rhun D, Deng HK, Biville F, Cescau S, Danchin A, Marignac G, Lenaour E, Boulouis HJ, Mavris M, Arnaud L, Yang H, Wang J, Quebatte M, Engel P, et al. The Trw type IV secretion system of Bartonella mediates host-specific adhesion to erythrocytes. Plos Pathogens. 6: e1000946. PMID 20548954 DOI: 10.1371/Journal.Ppat.1000946  0.425
2010 Quebatte M, Dehio M, Tropel D, Basler A, Toller I, Raddatz G, Engel P, Huser S, Schein H, Lindroos HL, Andersson SG, Dehio C. The BatR/BatS two-component regulatory system controls the adaptive response of Bartonella henselae during human endothelial cell infection. Journal of Bacteriology. 192: 3352-67. PMID 20418395 DOI: 10.1128/Jb.01676-09  0.309
2009 Engel P, Dehio C. Genomics of host-restricted pathogens of the genus Bartonella Genome Dynamics. 6: 158-169. DOI: 10.1159/000235769  0.388
2007 Saenz HL, Engel P, Stoeckli MC, Lanz C, Raddatz G, Vayssier-Taussat M, Birtles R, Schuster SC, Dehio C. Genomic analysis of Bartonella identifies type IV secretion systems as host adaptability factors. Nature Genetics. 39: 1469-76. PMID 18037886 DOI: 10.1038/Ng.2007.38  0.479
Show low-probability matches.