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Sirui Liu - Publications

Affiliations: 
2019- FAS Harvard University, Cambridge, MA, United States 
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7 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Zhang J, Liu S, Chen M, Chu H, Wang M, Wang Z, Yu J, Ni N, Yu F, Chen D, Yang YI, Xue B, Yang L, Liu Y, Gao YQ. Unsupervisedly Prompting AlphaFold2 for Accurate Few-Shot Protein Structure Prediction. Journal of Chemical Theory and Computation. PMID 37947474 DOI: 10.1021/acs.jctc.3c00528  0.39
2023 Pavlopoulos GA, Baltoumas FA, Liu S, Selvitopi O, Camargo AP, Nayfach S, Azad A, Roux S, Call L, Ivanova NN, Chen IM, Paez-Espino D, Karatzas E, Iliopoulos I, Konstantinidis K, et al. Unraveling the functional dark matter through global metagenomics. Nature. 622: 594-602. PMID 37821698 DOI: 10.1038/s41586-023-06583-7  0.562
2023 Baltoumas FA, Karatzas E, Liu S, Ovchinnikov S, Sofianatos Y, Chen IM, Kyrpides NC, Pavlopoulos GA. NMPFamsDB: a database of novel protein families from microbial metagenomes and metatranscriptomes. Nucleic Acids Research. PMID 37811892 DOI: 10.1093/nar/gkad800  0.558
2021 Norn C, Wicky BIM, Juergens D, Liu S, Kim D, Tischer D, Koepnick B, Anishchenko I, Baker D, Ovchinnikov S. Protein sequence design by conformational landscape optimization. Proceedings of the National Academy of Sciences of the United States of America. 118. PMID 33712545 DOI: 10.1073/pnas.2017228118  0.511
2020 Agbleke AA, Amitai A, Buenrostro JD, Chakrabarti A, Chu L, Hansen AS, Koenig KM, Labade AS, Liu S, Nozaki T, Ovchinnikov S, Seeber A, Shaban HA, Spille JH, Stephens AD, et al. Advances in Chromatin and Chromosome Research: Perspectives from Multiple Fields. Molecular Cell. PMID 32768408 DOI: 10.1016/J.Molcel.2020.07.003  0.466
2019 Quan H, Yang Y, Liu S, Tian H, Xue Y, Gao YQ. Chromatin structure changes during various processes from a DNA sequence view. Current Opinion in Structural Biology. 62: 1-8. PMID 31765966 DOI: 10.1016/j.sbi.2019.10.010  0.382
2018 Liu S, Zhang L, Quan H, Tian H, Meng L, Yang L, Feng H, Gao YQ. From 1D sequence to 3D chromatin dynamics and cellular functions: a phase separation perspective. Nucleic Acids Research. PMID 30053116 DOI: 10.1093/nar/gky633  0.316
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