Peter L Chang - Publications

Affiliations: 
University of Southern California, Los Angeles, CA, United States 
Area:
Genomics

31 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Chernova AI, Gubaev RF, Singh A, Sherbina K, Goryunova SV, Martynova EU, Goryunov DV, Boldyrev SV, Vanyushkina AA, Anikanov NA, Stekolshchikova EA, Yushina EA, Demurin YN, Mukhina ZM, Gavrilova VA, ... ... Chang PL, et al. Genotyping and lipid profiling of 601 cultivated sunflower lines reveals novel genetic determinants of oil fatty acid content. Bmc Genomics. 22: 505. PMID 34225652 DOI: 10.1186/s12864-021-07768-y  0.88
2021 Stribling D, Chang PL, Dalton JE, Conow CA, Rosenthal M, Hebets E, Graze RM, Arbeitman MN. The brain transcriptome of the wolf spider, Schizocosa ocreata. Bmc Research Notes. 14: 236. PMID 34162407 DOI: 10.1186/s13104-021-05648-y  0.56
2021 Ithnin M, Vu WT, Shin MG, Suryawanshi V, Sherbina K, Zolkafli SH, Serdari NM, Amiruddin MD, Abdullah N, Mustaffa S, Marjuni M, Nookiah R, Kushairi A, Marjoram P, Nuzhdin SV, ... Chang PL, et al. Genomic diversity and genome-wide association analysis related to yield and fatty acid composition of wild American oil palm. Plant Science : An International Journal of Experimental Plant Biology. 304: 110731. PMID 33568284 DOI: 10.1016/j.plantsci.2020.110731  0.88
2020 Sokolkova A, Bulyntsev SV, Chang PL, Carrasquilla-Garcia N, Igolkina AA, Noujdina NV, von Wettberg E, Vishnyakova MA, Cook DR, Nuzhdin SV, Samsonova MG. Genomic Analysis of Vavilov's Historic Chickpea Landraces Reveals Footprints of Environmental and Human Selection. International Journal of Molecular Sciences. 21. PMID 32486400 DOI: 10.3390/Ijms21113952  0.88
2020 Newell NR, Ray S, Dalton JE, Fortier JC, Kao JY, Chang PL, Nuzhdin SV, Arbeitman MN. The Post-mating Response: Gene Expression and Behavioral Changes Reveal Perdurance and Variation in Cross-Tissue Interactions. G3 (Bethesda, Md.). PMID 31907222 DOI: 10.1534/G3.119.400963  0.88
2019 Sivasakthi K, Marques E, Kalungwana N, Carrasquilla-Garcia N, Chang PL, Bergmann EM, Bueno E, Cordeiro M, Sani SGAS, Udupa SM, Rather IA, Rouf Mir R, Vadez V, Vandemark GJ, Gaur PM, et al. Functional Dissection of the Chickpea () Stay-Green Phenotype Associated with Molecular Variation at an Ortholog of Mendel's I Gene for Cotyledon Color: Implications for Crop Production and Carotenoid Biofortification. International Journal of Molecular Sciences. 20. PMID 31703441 DOI: 10.3390/Ijms20225562  0.64
2019 Greenlon A, Chang PL, Damtew ZM, Muleta A, Carrasquilla-Garcia N, Kim D, Nguyen HP, Suryawanshi V, Krieg CP, Yadav SK, Patel JS, Mukherjee A, Udupa S, Benjelloun I, Thami-Alami I, et al. Global-level population genomics reveals differential effects of geography and phylogeny on horizontal gene transfer in soil bacteria. Proceedings of the National Academy of Sciences of the United States of America. PMID 31285337 DOI: 10.1073/pnas.1900056116  0.64
2019 Shin MG, Bulyntsev SV, Chang PL, Korbu LB, Carrasquila-Garcia N, Vishnyakova MA, Samsonova MG, Cook DR, Nuzhdin SV. Multi-trait analysis of domestication genes in Cicer arietinum - Cicer reticulatum hybrids with a multidimensional approach: Modeling wide crosses for crop improvement. Plant Science : An International Journal of Experimental Plant Biology. 285: 122-131. PMID 31203876 DOI: 10.1016/J.Plantsci.2019.04.018  0.88
2019 Fu S, Chang PL, Friesen ML, Teakle NL, Tarone AM, Sze SH. Identifying similar transcripts in a related organism from de Bruijn graphs of RNA-Seq data, with applications to the study of salt and waterlogging tolerance in Melilotus. Bmc Genomics. 20: 425. PMID 31167652 DOI: 10.1186/S12864-019-5702-5  0.64
2018 Ghiselli F, Iannello M, Puccio G, Chang PL, Plazzi F, Nuzhdin SV, Passamonti M. Comparative transcriptomics in two bivalve species offers different perspectives on the evolution of sex-biased genes. Genome Biology and Evolution. PMID 29897459 DOI: 10.1093/Gbe/Evy082  0.88
2018 Sani SGAS, Chang PL, Zubair A, Carrasquilla-Garcia N, Cordeiro M, Penmetsa RV, Munis MFH, Nuzhdin SV, Cook DR, von Wettberg EJ. Genetic Diversity, Population Structure, and Genetic Correlation with Climatic Variation in Chickpea () Landraces from Pakistan. The Plant Genome. 11. PMID 29505627 DOI: 10.3835/Plantgenome2017.08.0067  0.88
2018 von Wettberg EJB, Chang PL, Başdemir F, Carrasquila-Garcia N, Korbu LB, Moenga SM, Bedada G, Greenlon A, Moriuchi KS, Singh V, Cordeiro MA, Noujdina NV, Dinegde KN, Shah Sani SGA, Getahun T, et al. Ecology and genomics of an important crop wild relative as a prelude to agricultural innovation. Nature Communications. 9: 649. PMID 29440741 DOI: 10.1038/S41467-018-02867-Z  0.88
2017 Zhigunov AV, Ulianich PS, Lebedeva MV, Chang PL, Nuzhdin SV, Potokina EK. Development of F1 hybrid population and the high-density linkage map for European aspen (Populus tremula L.) using RADseq technology. Bmc Plant Biology. 17: 180. PMID 29143610 DOI: 10.1186/S12870-017-1127-Y  0.88
2017 Ghiselli F, Milani L, Iannello M, Procopio E, Chang PL, Nuzhdin SV, Passamonti M. The complete mitochondrial genome of the grooved carpet shell, Ruditapes decussatus (Bivalvia, Veneridae). Peerj. 5: e3692. PMID 28848689 DOI: 10.7717/Peerj.3692  0.88
2017 Plekhanova E, Vishnyakova MA, Bulyntsev S, Chang PL, Carrasquilla-Garcia N, Negash K, Wettberg EV, Noujdina N, Cook DR, Samsonova MG, Nuzhdin SV. Genomic and phenotypic analysis of Vavilov's historic landraces reveals the impact of environment and genomic islands of agronomic traits. Scientific Reports. 7: 4816. PMID 28684880 DOI: 10.1038/S41598-017-05087-5  0.88
2017 Konorov EA, Nikitin MA, Mikhailov KV, Lysenkov SN, Belenky M, Chang PL, Nuzhdin SV, Scobeyeva VA. Genomic exaptation enables Lasius niger adaptation to urban environments. Bmc Evolutionary Biology. 17: 39. PMID 28251870 DOI: 10.1186/S12862-016-0867-X  0.88
2016 Epstein L, Kaur S, Chang PL, Carrasquilla-Garcia N, Lyu G, Cook DR, Subbarao KV, O'Donnell K. Races of the celery pathogen Fusarium oxysporum f. sp. apii are polyphyletic. Phytopathology. PMID 27938244 DOI: 10.1094/Phyto-04-16-0174-R  0.64
2016 Porter SS, Chang PL, Conow CA, Dunham JP, Friesen ML. Association mapping reveals novel serpentine adaptation gene clusters in a population of symbiotic Mesorhizobium. The Isme Journal. PMID 27420027 DOI: 10.1038/Ismej.2016.88  0.4
2016 Schultz NG, Ingels J, Hillhouse A, Wardwell K, Chang PL, Cheverud JM, Lutz C, Lu L, Williams RW, Dean MD. The Genetic Basis of Baculum Size and Shape Variation in Mice. G3 (Bethesda, Md.). PMID 26935419 DOI: 10.1534/G3.116.027888  0.64
2015 Asgharian H, Chang PL, Lysenkov S, Scobeyeva VA, Reisen WK, Nuzhdin SV. Evolutionary genomics of Culex pipiens: global and local adaptations associated with climate, life-history traits and anthropogenic factors. Proceedings. Biological Sciences / the Royal Society. 282. PMID 26085592 DOI: 10.1098/Rspb.2015.0728  0.88
2015 Vu WT, Chang PL, Moriuchi KS, Friesen ML. Genetic variation of transgenerational plasticity of offspring germination in response to salinity stress and the seed transcriptome of Medicago truncatula. Bmc Evolutionary Biology. 15: 59. PMID 25884157 DOI: 10.1186/s12862-015-0322-4  0.64
2014 Friesen ML, von Wettberg EJ, Badri M, Moriuchi KS, Barhoumi F, Chang PL, Cuellar-Ortiz S, Cordeiro MA, Vu WT, Arraouadi S, Djébali N, Zribi K, Badri Y, Porter SS, Aouani ME, et al. The ecological genomic basis of salinity adaptation in Tunisian Medicago truncatula. Bmc Genomics. 15: 1160. PMID 25534372 DOI: 10.1186/1471-2164-15-1160  0.64
2014 Asgharian H, Chang PL, Mazzoglio PJ, Negri I. Wolbachia is not all about sex: male-feminizing Wolbachia alters the leafhopper Zyginidia pullula transcriptome in a mainly sex-independent manner. Frontiers in Microbiology. 5: 430. PMID 25225494 DOI: 10.3389/Fmicb.2014.00430  0.88
2014 Jalvingh KM, Chang PL, Nuzhdin SV, Wertheim B. Genomic changes under rapid evolution: selection for parasitoid resistance. Proceedings. Biological Sciences / the Royal Society. 281: 20132303. PMID 24500162 DOI: 10.1098/Rspb.2013.2303  0.64
2013 Ghiselli F, Milani L, Guerra D, Chang PL, Breton S, Nuzhdin SV, Passamonti M. Structure, transcription, and variability of metazoan mitochondrial genome: perspectives from an unusual mitochondrial inheritance system. Genome Biology and Evolution. 5: 1535-54. PMID 23882128 DOI: 10.1093/Gbe/Evt112  0.64
2013 Hoxha V, Lama C, Chang PL, Saurabh S, Patel N, Olate N, Dauwalder B. Sex-specific signaling in the blood-brain barrier is required for male courtship in Drosophila. Plos Genetics. 9: e1003217. PMID 23359644 DOI: 10.1371/journal.pgen.1003217  0.64
2012 Winbush A, Reed D, Chang PL, Nuzhdin SV, Lyons LC, Arbeitman MN. Identification of gene expression changes associated with long-term memory of courtship rejection in Drosophila males. G3 (Bethesda, Md.). 2: 1437-45. PMID 23173095 DOI: 10.1534/G3.112.004119  0.64
2012 Remolina SC, Chang PL, Leips J, Nuzhdin SV, Hughes KA. Genomic basis of aging and life-history evolution in Drosophila melanogaster. Evolution; International Journal of Organic Evolution. 66: 3390-403. PMID 23106705 DOI: 10.1111/J.1558-5646.2012.01710.X  0.64
2012 Ghiselli F, Milani L, Chang PL, Hedgecock D, Davis JP, Nuzhdin SV, Passamonti M. De Novo assembly of the Manila clam Ruditapes philippinarum transcriptome provides new insights into expression bias, mitochondrial doubly uniparental inheritance and sex determination. Molecular Biology and Evolution. 29: 771-86. PMID 21976711 DOI: 10.1093/Molbev/Msr248  0.64
2011 Chang PL, Dunham JP, Nuzhdin SV, Arbeitman MN. Somatic sex-specific transcriptome differences in Drosophila revealed by whole transcriptome sequencing. Bmc Genomics. 12: 364. PMID 21756339 DOI: 10.1186/1471-2164-12-364  0.64
2010 Chang PL, Dilkes BP, McMahon M, Comai L, Nuzhdin SV. Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners. Genome Biology. 11: R125. PMID 21182768 DOI: 10.1186/Gb-2010-11-12-R125  0.64
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