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Ravishankar Ramachandran - Publications

Affiliations: 
Max Planck Institute of Biochemistry, Martinsried 
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24 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2021 Afsar M, Shukla A, Kumar N, Ramachandran R. Salt bridges at the subdomain interfaces of the adenylation domain and active-site residues of Mycobacterium tuberculosis NAD-dependent DNA ligase A (MtbLigA) are important for the initial steps of nick-sealing activity. Acta Crystallographica. Section D, Structural Biology. 77: 776-789. PMID 34076591 DOI: 10.1107/S2059798321003107  0.31
2020 Shukla A, Afsar M, Kumar N, Kumar S, Ramachandran R. Structure based identification of first-in-class fragment inhibitors that target the NMN pocket of M. tuberculosis NAD-dependent DNA Ligase A. Journal of Structural Biology. 107655. PMID 33197566 DOI: 10.1016/j.jsb.2020.107655  0.392
2020 Anas M, Shukla A, Tripathi A, Kumari V, Prakash C, Nag P, Kumar LS, Sharma S, Ramachandran R, Kumar N. Structural-functional diversity of malaria parasite's PfHSP70-1 and PfHSP40 chaperone pair gives an edge over human orthologs in chaperone-assisted protein folding. The Biochemical Journal. PMID 32893851 DOI: 10.1042/BCJ20200434  0.314
2018 Jaiswal S, Chatterjee A, Pandey S, Lata K, Gadi RK, Manda R, Kumar S, Reddy MS, Ramachandran R, Srivastava KK. Mycobacterial Protein tyrosine kinase A phosphorylates PtpA at Tyrosine residues and the mechanism is stalled by the novel series of inhibitors. Journal of Drug Targeting. 1-26. PMID 29724125 DOI: 10.1080/1061186X.2018.1473407  0.308
2017 Lata K, Afsar M, Ramachandran R. Biochemical characterization and novel inhibitor identification of Mycobacterium tuberculosis Endonuclease VIII 2 (Rv3297). Biochemistry and Biophysics Reports. 12: 20-28. PMID 28955788 DOI: 10.1016/j.bbrep.2017.07.010  0.305
2017 Gaur A, Sharma VK, Shree S, Rai N, Ramachandran R. Characterization of EccA3, a CbbX family ATPase from the ESX-3 secretion pathway of M. tuberculosis. Biochimica Et Biophysica Acta. PMID 28400297 DOI: 10.1016/j.bbapap.2017.04.001  0.318
2016 Dey A, Shree S, Pandey SK, Tripathi RP, Ramachandran R. Crystal Structure of Mycobacterium tuberculosis H37Rv AldR (rv2779c), a regulator of the ald gene: DNA-binding, and identification of small-molecule inhibitors. The Journal of Biological Chemistry. PMID 27006398 DOI: 10.1074/jbc.M115.700484  0.368
2015 Khanam T, Rai N, Ramachandran R. Mycobacterium tuberculosis class II AP-endonuclease/3'-5' exonuclease III (XthA) exhibits DNA regulated modes of interaction with the sliding DNA β-clamp. Molecular Microbiology. PMID 26103519 DOI: 10.1111/mmi.13102  0.314
2015 Tripathi SM, Agarwal A, Ramachandran R. Mutational analysis of Mycobacterium tuberculosis lysine ɛ-aminotransferase and inhibitor co-crystal structures, reveals distinct binding modes. Biochemical and Biophysical Research Communications. 463: 154-60. PMID 26003725 DOI: 10.1016/j.bbrc.2015.05.055  0.466
2015 Khanam T, Shukla A, Rai N, Ramachandran R. Critical determinants for substrate recognition and catalysis in the M. tuberculosis class II AP-endonuclease/3'-5' exonuclease III. Biochimica Et Biophysica Acta. 1854: 505-16. PMID 25748880 DOI: 10.1016/j.bbapap.2015.02.019  0.335
2014 Yadav GP, Shree S, Maurya R, Rai N, Singh DK, Srivastava KK, Ramachandran R. Characterization of M. tuberculosis SerB2, an essential HAD-family phosphatase, reveals novel properties. Plos One. 9: e115409. PMID 25521849 DOI: 10.1371/journal.pone.0115409  0.333
2014 Dey A, Ramachandran R. Cloning, overexpression, purification and preliminary X-ray analysis of a feast/famine regulatory protein (Rv2779c) from Mycobacterium tuberculosis H37Rv. Acta Crystallographica. Section F, Structural Biology Communications. 70: 97-100. PMID 24419627 DOI: 10.1107/S2053230X13033128  0.322
2013 Luthra A, Gaur A, Ramachandran R. Rv3868 (EccA1), an essential component of the Mycobacterium tuberculosis ESX-1 secretion system, is thermostable. Biochimica Et Biophysica Acta. 1834: 1181-6. PMID 23415725 DOI: 10.1016/j.bbapap.2013.02.004  0.305
2012 Kukshal V, Khanam T, Chopra D, Singh N, Sanyal S, Ramachandran R. M. tuberculosis sliding β-clamp does not interact directly with the NAD+-dependent DNA ligase. Plos One. 7: e35702. PMID 22545130 DOI: 10.1371/journal.pone.0035702  0.331
2009 Shrivastava T, Dey A, Ramachandran R. Ligand-induced structural transitions, mutational analysis, and 'open' quaternary structure of the M. tuberculosis feast/famine regulatory protein (Rv3291c). Journal of Molecular Biology. 392: 1007-19. PMID 19651141 DOI: 10.1016/j.jmb.2009.07.084  0.478
2009 Misra G, Ramachandran R. Hsp70-1 from Plasmodium falciparum: protein stability, domain analysis and chaperone activity. Biophysical Chemistry. 142: 55-64. PMID 19339102 DOI: 10.1016/j.bpc.2009.03.006  0.331
2009 Misra G, Aggarwal A, Dube D, Zaman MS, Singh Y, Ramachandran R. Crystal structure of the Bacillus anthracis nucleoside diphosphate kinase and its characterization reveals an enzyme adapted to perform under stress conditions. Proteins. 76: 496-506. PMID 19241473 DOI: 10.1002/prot.22364  0.362
2008 Malik SS, Luthra A, Srivastava SK, Ramachandran R. Mycobacterium tuberculosis UsfX (Rv3287c) exhibits novel nucleotide binding and hydrolysis properties. Biochemical and Biophysical Research Communications. 375: 465-70. PMID 18722345 DOI: 10.1016/j.bbrc.2008.08.043  0.36
2007 Shrivastava T, Ramachandran R. Mechanistic insights from the crystal structures of a feast/famine regulatory protein from Mycobacterium tuberculosis H37Rv Nucleic Acids Research. 35: 7324-7335. PMID 17962306 DOI: 10.1093/nar/gkm850  0.409
2007 Srivastava SK, Dube D, Kukshal V, Jha AK, Hajela K, Ramachandran R. NAD+-dependent DNA ligase (Rv3014c) from Mycobacterium tuberculosis: novel structure-function relationship and identification of a specific inhibitor. Proteins. 69: 97-111. PMID 17557328 DOI: 10.1002/prot.21457  0.389
2005 Srivastava SK, Tripathi RP, Ramachandran R. NAD+-dependent DNA Ligase (Rv3014c) from Mycobacterium tuberculosis. Crystal structure of the adenylation domain and identification of novel inhibitors. The Journal of Biological Chemistry. 280: 30273-81. PMID 15901723 DOI: 10.1074/jbc.M503780200  0.35
2005 Azim MK, Goehring W, Song HK, Ramachandran R, Bochtler M, Goettig P. Characterization of the HslU chaperone affinity for HslV protease. Protein Science : a Publication of the Protein Society. 14: 1357-62. PMID 15802652 DOI: 10.1110/ps.04970405  0.503
2003 Song HK, Bochtler M, Azim MK, Hartmann C, Huber R, Ramachandran R. Isolation and characterization of the prokaryotic proteasome homolog HslVU (ClpQY) from Thermotoga maritima and the crystal structure of HslV. Biophysical Chemistry. 100: 437-52. PMID 12646382 DOI: 10.1016/S0301-4622(02)00297-1  0.494
2002 Ramachandran R, Hartmann C, Song HK, Huber R, Bochtler M. Functional interactions of HslV (ClpQ) with the ATPase HslU (ClpY). Proceedings of the National Academy of Sciences of the United States of America. 99: 7396-401. PMID 12032294 DOI: 10.1073/Pnas.102188799  0.491
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