Year |
Citation |
Score |
2025 |
Li BP, Kang N, Xu ZX, Luo HR, Fan SY, Ao XH, Li X, Han YP, Ou XB, Xu LH. Transposable elements shape the landscape of heterozygous structural variation in a bird genome. Zoological Research. 46: 75-86. PMID 39846188 DOI: 10.24272/j.issn.2095-8137.2024.237 |
0.62 |
|
2024 |
Xu L, Ren Y, Wu J, Cui T, Dong R, Huang C, Feng Z, Zhang T, Yang P, Yuan J, Xu X, Liu J, Wang J, Chen W, Mi D, ... ... Xu L, et al. Author Correction: Evolution and expression patterns of the neo-sex chromosomes of the crested ibis. Nature Communications. 15: 9278. PMID 39468078 DOI: 10.1038/s41467-024-53229-x |
0.521 |
|
2024 |
Zhou C, Zhou Y, Xu L, Liu F, Lei L, Gao H, Li J, Fu S, Duan Y, Tan Y, Mao W, Wang Q, Zhou R, Xiao S, Liu C, et al. Chromosome-level genome assembly and population genomic analysis provide insights into the genetic diversity and adaption of Schizopygopsis younghusbandi on the Tibetan Plateau. Integrative Zoology. PMID 39350496 DOI: 10.1111/1749-4877.12910 |
0.57 |
|
2024 |
Wu J, Liu F, Jiao J, Luo H, Fan S, Liu J, Wang H, Cui N, Zhao N, Qu Q, Kuraku S, Huang Z, Xu L. Comparative genomics illuminates karyotype and sex chromosome evolution of sharks. Cell Genomics. 100607. PMID 38996479 DOI: 10.1016/j.xgen.2024.100607 |
0.658 |
|
2024 |
Xu L, Ren Y, Wu J, Cui T, Dong R, Huang C, Feng Z, Zhang T, Yang P, Yuan J, Xu X, Liu J, Wang J, Chen W, Mi D, ... ... Xu L, et al. Evolution and expression patterns of the neo-sex chromosomes of the crested ibis. Nature Communications. 15: 1670. PMID 38395916 DOI: 10.1038/s41467-024-46052-x |
0.635 |
|
2023 |
Rice ES, Alberdi A, Alfieri J, Athrey G, Balacco JR, Bardou P, Blackmon H, Charles M, Cheng HH, Fedrigo O, Fiddaman SR, Formenti G, Frantz LAF, Gilbert MTP, Hearn CJ, ... ... Xu L, et al. A pangenome graph reference of 30 chicken genomes allows genotyping of large and complex structural variants. Bmc Biology. 21: 267. PMID 37993882 DOI: 10.1186/s12915-023-01758-0 |
0.47 |
|
2023 |
Luo H, Jiang X, Li B, Wu J, Shen J, Xu Z, Zhou X, Hou M, Huang Z, Ou X, Xu L. A high-quality genome assembly highlights the evolutionary history of the great bustard (Otis tarda, Otidiformes). Communications Biology. 6: 746. PMID 37463976 DOI: 10.1038/s42003-023-05137-x |
0.634 |
|
2023 |
Huang Z, Xu L, Cai C, Zhou Y, Liu J, Xu Z, Zhu Z, Kang W, Cen W, Pei S, Chen D, Shi C, Wu X, Huang Y, Xu C, et al. Three amphioxus reference genomes reveal gene and chromosome evolution of chordates. Proceedings of the National Academy of Sciences of the United States of America. 120: e2201504120. PMID 36867684 DOI: 10.1073/pnas.2201504120 |
0.711 |
|
2023 |
Huang Z, Xu Z, Bai H, Huang Y, Kang N, Ding X, Liu J, Luo H, Yang C, Chen W, Guo Q, Xue L, Zhang X, Xu L, Chen M, ... ... Xu L, et al. Evolutionary analysis of a complete chicken genome. Proceedings of the National Academy of Sciences of the United States of America. 120: e2216641120. PMID 36780517 DOI: 10.1073/pnas.2216641120 |
0.659 |
|
2022 |
Long X, Charlesworth D, Qi J, Wu R, Chen M, Wang Z, Xu L, Fu H, Zhang X, Chen X, He L, Zheng L, Huang Z, Zhou Q. Independent evolution of sex chromosomes and male pregnancy-related genes in two seahorse species. Molecular Biology and Evolution. PMID 36578180 DOI: 10.1093/molbev/msac279 |
0.69 |
|
2022 |
Ma P, Liu X, Xu Z, Liu H, Ding X, Huang Z, Shi C, Liang L, Xu L, Li X, Li G, He Y, Ding Z, Chai C, Wang H, et al. Joint profiling of gene expression and chromatin accessibility during amphioxus development at single-cell resolution. Cell Reports. 39: 110979. PMID 35732129 DOI: 10.1016/j.celrep.2022.110979 |
0.451 |
|
2022 |
Huang Z, De O Furo I, Liu J, Peona V, Gomes AJB, Cen W, Huang H, Zhang Y, Chen D, Xue T, Zhang Q, Yue Z, Wang Q, Yu L, Chen Y, ... ... Xu L, et al. Recurrent chromosome reshuffling and the evolution of neo-sex chromosomes in parrots. Nature Communications. 13: 944. PMID 35177601 DOI: 10.1038/s41467-022-28585-1 |
0.637 |
|
2021 |
Wang Z, Zhang J, Xu X, Witt C, Deng Y, Chen G, Meng G, Feng S, Xu L, Szekely T, Zhang G, Zhou Q. Phylogeny and sex chromosome evolution of palaeognathae. Journal of Genetics and Genomics = Yi Chuan Xue Bao. PMID 34872841 DOI: 10.1016/J.JGG.2021.06.013 |
0.738 |
|
2021 |
Xue L, Gao Y, Wu M, Tian T, Fan H, Huang Y, Huang Z, Li D, Xu L. Telomere-to-telomere assembly of a fish Y chromosome reveals the origin of a young sex chromosome pair. Genome Biology. 22: 203. PMID 34253240 DOI: 10.1186/s13059-021-02430-y |
0.61 |
|
2021 |
Liu J, Wang Z, Li J, Xu L, Liu J, Feng S, Guo C, Chen S, Ren Z, Rao J, Wei K, Chen Y, Jarvis E, Zhang G, Zhou Q. A new emu genome illuminates the evolution of genome configuration and nuclear architecture of avian chromosomes. Genome Research. PMID 33408157 DOI: 10.1101/gr.271569.120 |
0.755 |
|
2021 |
Li J, Zhang J, Liu J, Zhou Y, Cai C, Xu L, Dai X, Feng S, Guo C, Rao J, Wei K, Jarvis ED, Jiang Y, Zhou Z, Zhang G, et al. A new duck genome reveals conserved and convergently evolved chromosome architectures of birds and mammals. Gigascience. 10. PMID 33406261 DOI: 10.1093/gigascience/giaa142 |
0.729 |
|
2020 |
Conte MA, Clark FE, Roberts RB, Xu L, Tao W, Zhou Q, Wang D, Kocher TD. Origin of a giant sex chromosome. Molecular Biology and Evolution. PMID 33300980 DOI: 10.1093/molbev/msaa319 |
0.667 |
|
2020 |
Xu L, Irestedt M, Zhou Q. Sequence Transpositions Restore Genes on the Highly Degenerated W Chromosomes of Songbirds. Genes. 11. PMID 33126459 DOI: 10.3390/genes11111267 |
0.678 |
|
2020 |
Tao W, Xu L, Zhao L, Zhu Z, Wu X, Min Q, Wang D, Zhou Q. High-quality chromosome-level genomes of two tilapia species reveal their evolution of repeat sequences and sex chromosomes. Molecular Ecology Resources. PMID 33035394 DOI: 10.1111/1755-0998.13273 |
0.724 |
|
2020 |
Xu L, Zhou Q. The Female-Specific W Chromosomes of Birds Have Conserved Gene Contents but Are Not Feminized. Genes. 11. PMID 32992746 DOI: 10.3390/genes11101126 |
0.614 |
|
2020 |
Peona V, Blom MPK, Xu L, Burri R, Sullivan S, Bunikis I, Liachko I, Haryoko T, Jønsson KA, Zhou Q, Irestedt M, Suh A. Identifying the causes and consequences of assembly gaps using a multiplatform genome assembly of a bird-of-paradise. Molecular Ecology Resources. PMID 32937018 DOI: 10.1111/1755-0998.13252 |
0.553 |
|
2019 |
Xu L, Wa Sin SY, Grayson P, Edwards SV, Sackton TB. Evolutionary dynamics of sex chromosomes of paleognathous birds. Genome Biology and Evolution. PMID 31329234 DOI: 10.1093/gbe/evz154 |
0.693 |
|
2019 |
Cheng H, Liu J, Wen J, Nie X, Xu L, Chen N, Li Z, Wang Q, Zheng Z, Li M, Cui L, Liu Z, Bian J, Wang Z, Xu S, et al. Frequent intra- and inter-species introgression shapes the landscape of genetic variation in bread wheat. Genome Biology. 20: 136. PMID 31300020 DOI: 10.1186/s13059-019-1744-x |
0.506 |
|
2019 |
Xu L, Auer G, Peona V, Suh A, Deng Y, Feng S, Zhang G, Blom MPK, Christidis L, Prost S, Irestedt M, Zhou Q. Dynamic evolutionary history and gene content of sex chromosomes across diverse songbirds. Nature Ecology & Evolution. PMID 30936435 DOI: 10.1038/S41559-019-0850-1 |
0.744 |
|
2017 |
Seki R, Li C, Fang Q, Hayashi S, Egawa S, Hu J, Xu L, Pan H, Kondo M, Sato T, Matsubara H, Kamiyama N, Kitajima K, Saito D, Liu Y, et al. Functional roles of Aves class-specific cis-regulatory elements on macroevolution of bird-specific features. Nature Communications. 8: 14229. PMID 28165450 DOI: 10.1038/Ncomms14229 |
0.594 |
|
2015 |
Uebbing S, Konzer A, Xu L, Backström N, Brunström B, Bergquist J, Ellegren H. Quantitative mass spectrometry reveals partial translational regulation for dosage compensation in chicken. Molecular Biology and Evolution. PMID 26108680 DOI: 10.1093/Molbev/Msv147 |
0.627 |
|
2014 |
Li C, Zhang Y, Li J, Kong L, Hu H, Pan H, Xu L, Deng Y, Li Q, Jin L, Yu H, Chen Y, Liu B, Yang L, Liu S, et al. Two Antarctic penguin genomes reveal insights into their evolutionary history and molecular changes related to the Antarctic environment. Gigascience. 3: 27. PMID 25671092 DOI: 10.1186/2047-217X-3-27 |
0.643 |
|
2014 |
Zhang G, Li C, Li Q, Li B, Larkin DM, Lee C, Storz JF, Antunes A, Greenwold MJ, Meredith RW, Ödeen A, Cui J, Zhou Q, Xu L, Pan H, et al. Comparative genomics reveals insights into avian genome evolution and adaptation. Science (New York, N.Y.). 346: 1311-20. PMID 25504712 DOI: 10.1126/Science.1251385 |
0.708 |
|
2014 |
Poulsen M, Hu H, Li C, Chen Z, Xu L, Otani S, Nygaard S, Nobre T, Klaubauf S, Schindler PM, Hauser F, Pan H, Yang Z, Sonnenberg AS, de Beer ZW, et al. Complementary symbiont contributions to plant decomposition in a fungus-farming termite. Proceedings of the National Academy of Sciences of the United States of America. 111: 14500-5. PMID 25246537 DOI: 10.1073/Pnas.1319718111 |
0.503 |
|
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