Mark Chaisson, Ph.D.

Affiliations: 
Genome Sciences University of Washington, Seattle, Seattle, WA 
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"Mark Chaisson"
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Publications

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Zhao X, Collins RL, Lee WP, et al. (2021) Expectations and blind spots for structural variation detection from long-read assemblies and short-read genome sequencing technologies. American Journal of Human Genetics
Ebert P, Audano PA, Zhu Q, et al. (2021) Haplotype-resolved diverse human genomes and integrated analysis of structural variation. Science (New York, N.Y.)
Porubsky D, Ebert P, Audano PA, et al. (2020) Fully phased human genome assembly without parental data using single-cell strand sequencing and long reads. Nature Biotechnology
Sulovari A, Li R, Audano PA, et al. (2019) Human-specific tandem repeat expansion and differential gene expression during primate evolution. Proceedings of the National Academy of Sciences of the United States of America
Chaisson MJP, Sanders AD, Zhao X, et al. (2019) Multi-platform discovery of haplotype-resolved structural variation in human genomes. Nature Communications. 10: 1784
Vollger MR, Dishuck PC, Sorensen M, et al. (2019) Long-read sequence and assembly of segmental duplications. Nature Methods. 16: 88-94
Kronenberg ZN, Fiddes IT, Gordon D, et al. (2018) High-resolution comparative analysis of great ape genomes. Science (New York, N.Y.). 360
Huddleston J, Chaisson MJP, Steinberg KM, et al. (2018) Corrigendum: Discovery and genotyping of structural variation from long-read haploid genome sequence data. Genome Research. 28: 144
Huddleston J, Chaisson MJ, Meltz Steinberg K, et al. (2016) Discovery and genotyping of structural variation from long-read haploid genome sequence data. Genome Research
Gordon D, Huddleston J, Chaisson MJ, et al. (2016) Long-read sequence assembly of the gorilla genome. Science (New York, N.Y.). 352: aae0344
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