☰

cached image

Suzanne B. Sandmeyer - Publications

Affiliations: 
1984- University of California, Irvine, Irvine, CA 
Area:
Molecular Biology, Biochemistry
Website:
http://www.faculty.uci.edu/profile.cfm?faculty_id=2247
Tree Info Similar researchers PubMed Report error

66 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Patterson K, Shavarebi F, Magnan C, Chang I, Qi X, Baldi P, Bilanchone V, Sandmeyer SB. Local features determine Ty3 targeting frequency at RNA polymerase III transcription start sites. Genome Research. PMID 31249062 DOI: 10.1101/Gr.240861.118  0.47
2019 Dodonova SO, Prinz S, Bilanchone V, Sandmeyer S, Briggs JAG. Structure of the Ty3/Gypsy retrotransposon capsid and the evolution of retroviruses. Proceedings of the National Academy of Sciences of the United States of America. PMID 31036670 DOI: 10.1073/Pnas.1900931116  0.419
2018 Patterson K, Yu J, Landberg J, Chang I, Shavarebi F, Bilanchone V, Sandmeyer S. FUNCTIONAL GENOMICS FOR THE OLEAGINOUS YEAST YARROWIA LIPOLYTICA. Metabolic Engineering. PMID 29792930 DOI: 10.1016/J.Ymben.2018.05.008  0.398
2018 Yu J, Landberg J, Shavarebi F, Bilanchone V, Okerlund A, Wanninayake U, Zhao L, Kraus G, Sandmeyer S. Bioengineering triacetic acid lactone production in Yarrowia lipolytica for pogostone synthesis. Biotechnology and Bioengineering. PMID 29777591 DOI: 10.1002/Bit.26733  0.301
2018 Rowley PA, Patterson K, Sandmeyer SB, Sawyer SL. Control of yeast retrotransposons mediated through nucleoporin evolution. Plos Genetics. 14: e1007325. PMID 29694349 DOI: 10.1371/Journal.Pgen.1007325  0.418
2016 Magnan C, Yu J, Chang I, Jahn E, Kanomata Y, Wu J, Zeller M, Oakes M, Baldi P, Sandmeyer S. Sequence Assembly of Yarrowia lipolytica Strain W29/CLIB89 Shows Transposable Element Diversity. Plos One. 11: e0162363. PMID 27603307 DOI: 10.1371/Journal.Pone.0162363  0.409
2015 Bilanchone V, Clemens K, Kaake R, Dawson AR, Matheos D, Nagashima K, Sitlani P, Patterson K, Chang I, Huang L, Sandmeyer S. Ty3 Retrotransposon Hijacks Mating Yeast RNA Processing Bodies to Infect New Genomes. Plos Genetics. 11: e1005528. PMID 26421679 DOI: 10.1371/Journal.Pgen.1005528  0.803
2015 Sandmeyer S, Patterson K, Bilanchone V. Ty3, a Position-specific Retrotransposon in Budding Yeast. Microbiology Spectrum. 3: 965-996. PMID 26104707 DOI: 10.1128/Microbiolspec.Mdna3-0057-2014  0.568
2013 Qi X, Vargas E, Larsen L, Knapp W, Hatfield GW, Lathrop R, Sandmeyer S. Directed DNA shuffling of retrovirus and retrotransposon integrase protein domains. Plos One. 8: e63957. PMID 23691126 DOI: 10.1371/Journal.Pone.0063957  0.531
2013 Clemens K, Bilanchone V, Beliakova-Bethell N, Larsen LS, Nguyen K, Sandmeyer S. Sequence requirements for localization and packaging of Ty3 retroelement RNA. Virus Research. 171: 319-31. PMID 23073180 DOI: 10.1016/J.Virusres.2012.10.008  0.777
2012 Shen MW, Fang F, Sandmeyer S, Da Silva NA. Development and characterization of a vector set with regulated promoters for systematic metabolic engineering in Saccharomyces cerevisiae. Yeast (Chichester, England). 29: 495-503. PMID 23166051 DOI: 10.1002/Yea.2930  0.377
2012 Qi X, Sandmeyer S. In vitro targeting of strand transfer by the Ty3 retroelement integrase. The Journal of Biological Chemistry. 287: 18589-95. PMID 22493285 DOI: 10.1074/Jbc.M111.326025  0.531
2012 Qi X, Daily K, Nguyen K, Wang H, Mayhew D, Rigor P, Forouzan S, Johnston M, Mitra RD, Baldi P, Sandmeyer S. Retrotransposon profiling of RNA polymerase III initiation sites. Genome Research. 22: 681-92. PMID 22287102 DOI: 10.1101/Gr.131219.111  0.535
2011 Clemens K, Larsen L, Zhang M, Kuznetsov Y, Bilanchone V, Randall A, Harned A, Dasilva R, Nagashima K, McPherson A, Baldi P, Sandmeyer S. The TY3 Gag3 spacer controls intracellular condensation and uncoating. Journal of Virology. 85: 3055-66. PMID 21270167 DOI: 10.1128/Jvi.01055-10  0.779
2011 Fang F, Salmon K, Shen MW, Aeling KA, Ito E, Irwin B, Tran UP, Hatfield GW, Da Silva NA, Sandmeyer S. A vector set for systematic metabolic engineering in Saccharomyces cerevisiae. Yeast (Chichester, England). 28: 123-36. PMID 20936606 DOI: 10.1002/Yea.1824  0.392
2010 Sandmeyer SB, Clemens KA. Function of a retrotransposon nucleocapsid protein. Rna Biology. 7: 642-54. PMID 21189452 DOI: 10.4161/Rna.7.6.14117  0.81
2010 Zhang M, Larsen LS, Irwin B, Bilanchone V, Sandmeyer S. Two-hybrid analysis of Ty3 capsid subdomain interactions Mobile Dna. 1: 14-14. PMID 20444245 DOI: 10.1186/1759-8753-1-14  0.433
2009 Beliakova-Bethell N, Terry LJ, Bilanchone V, DaSilva R, Nagashima K, Wente SR, Sandmeyer S. Ty3 nuclear entry is initiated by viruslike particle docking on GLFG nucleoporins. Journal of Virology. 83: 11914-25. PMID 19759143 DOI: 10.1128/Jvi.01192-09  0.755
2009 Sandmeyer S, Bilanchone V, Beliakova-Bethell N, Christiansen K, Nguyen K. Host support of Ty3 retrotransposition in Saccharomyces cerevisiae Retrovirology. 6. DOI: 10.1186/1742-4690-6-S2-I17  0.525
2008 Larsen LS, Beliakova-Bethell N, Bilanchone V, Zhang M, Lamsa A, Dasilva R, Hatfield GW, Nagashima K, Sandmeyer S. Ty3 nucleocapsid controls localization of particle assembly. Journal of Virology. 82: 2501-14. PMID 18094177 DOI: 10.1128/Jvi.01814-07  0.793
2008 Larsen LS, Kuznetsov Y, McPherson A, Hatfield GW, Sandmeyer S. TY3 GAG3 protein forms ordered particles in Escherichia coli. Virology. 370: 223-7. PMID 17964628 DOI: 10.1016/J.Virol.2007.09.017  0.452
2007 Larsen LS, Zhang M, Beliakova-Bethell N, Bilanchone V, Lamsa A, Nagashima K, Najdi R, Kosaka K, Kovacevic V, Cheng J, Baldi P, Hatfield GW, Sandmeyer S. Ty3 capsid mutations reveal early and late functions of the amino-terminal domain. Journal of Virology. 81: 6957-72. PMID 17442718 DOI: 10.1128/Jvi.02207-06  0.778
2006 Beliakova-Bethell N, Beckham C, Giddings TH, Winey M, Parker R, Sandmeyer S. Virus-like particles of the Ty3 retrotransposon assemble in association with P-body components Rna. 12: 94-101. PMID 16373495 DOI: 10.1261/Rna.2264806  0.771
2005 Kuznetsov YG, Zhang M, Menees TM, McPherson A, Sandmeyer S. Investigation by atomic force microscopy of the structure of Ty3 retrotransposon particles. Journal of Virology. 79: 8032-45. PMID 15956549 DOI: 10.1128/Jvi.79.13.8032-8045.2005  0.483
2005 Irwin B, Aye M, Baldi P, Beliakova-Bethell N, Cheng H, Dou Y, Liou W, Sandmeyer S. Retroviruses and yeast retrotransposons use overlapping sets of host genes. Genome Research. 15: 641-54. PMID 15837808 DOI: 10.1101/Gr.3739005  0.81
2005 Aye M, Irwin B, Beliakova-Bethell N, Chen E, Garrus J, Sandmeyer S. Host factors that affect Ty3 retrotransposition in Saccharomyces cerevisiae. Genetics. 168: 1159-76. PMID 15579677 DOI: 10.1534/Genetics.104.028126  0.816
2003 Aye M, Sandmeyer SB. Ty3 requires yeast La homologous protein for wild-type frequencies of transposition. Molecular Microbiology. 49: 501-15. PMID 12828645 DOI: 10.1046/J.1365-2958.2003.03568.X  0.83
2003 Sandmeyer S. Integration by design Proceedings of the National Academy of Sciences of the United States of America. 100: 5586-5588. PMID 12732725 DOI: 10.1073/Pnas.1031802100  0.453
2002 Yieh L, Hatzis H, Kassavetis G, Sandmeyer SB. Mutational analysis of the transcription factor IIIB-DNA target of Ty3 retroelement integration. The Journal of Biological Chemistry. 277: 25920-8. PMID 11994300 DOI: 10.1074/Jbc.M202729200  0.836
2002 Nymark-McMahon MH, Beliakova-Bethell NS, Darlix JL, Le Grice SF, Sandmeyer SB. Ty3 integrase is required for initiation of reverse transcription. Journal of Virology. 76: 2804-16. PMID 11861848 DOI: 10.1128/Jvi.76.6.2804-2816.2002  0.781
2001 Aye M, Dildine SL, Claypool JA, Jourdain S, Sandmeyer SB. A truncation mutant of the 95-kilodalton subunit of transcription factor IIIC reveals asymmetry in Ty3 integration Molecular and Cellular Biology. 21: 7839-7851. PMID 11604518 DOI: 10.1128/Mcb.21.22.7839-7851.2001  0.838
2001 Lin SS, Nymark-McMahon MH, Yieh L, Sandmeyer SB. Integrase mediates nuclear localization of Ty3. Molecular and Cellular Biology. 21: 7826-38. PMID 11604517 DOI: 10.1128/MCB.21.22.7826-7838.2001  0.799
2001 Claypool JA, Malik HS, Eickbush TH, Sandmeyer SB. Ten-kilodalton domain in Ty3 Gag3-Pol3p between PR and RT is dispensable for Ty3 transposition. Journal of Virology. 75: 1557-60. PMID 11152529 DOI: 10.1128/Jvi.75.3.1557-1560.2001  0.528
2000 Yieh L, Kassavetis G, Geiduschek EP, Sandmeyer SB. The Brf and TATA-binding protein subunits of the RNA polymerase III transcription factor IIIB mediate position-specific integration of the gypsy-like element, Ty3 Journal of Biological Chemistry. 275: 29800-29807. PMID 10882723 DOI: 10.1074/Jbc.M003149200  0.824
2000 Hu Y, Sandmeyer SB, McLaughlin C, Kibler DF. Combinatorial motif analysis and hypothesis generation on a genomic scale. Bioinformatics. 16: 222-232. PMID 10869015 DOI: 10.1093/Bioinformatics/16.3.222  0.374
1999 Seol JH, Feldman RM, Zachariae W, Shevchenko A, Correll CC, Lyapina S, Chi Y, Galova M, Claypool J, Sandmeyer S, Nasmyth K, Deshaies RJ, Shevchenko A, Deshaies RJ. Cdc53/cullin and the essential Hrt1 RING-H2 subunit of SCF define a ubiquitin ligase module that activates the E2 enzyme Cdc34. Genes & Development. 13: 1614-26. PMID 10385629 DOI: 10.1101/Gad.13.12.1614  0.36
1999 Nymark-McMahon MH, Sandmeyer SB. Mutations in nonconserved domains of Ty3 integrase affect multiple stages of the Ty3 life cycle. Journal of Virology. 73: 453-65. PMID 9847351  0.795
1998 Gabus C, Ficheux D, Rau M, Keith G, Sandmeyer S, Darlix JL. The yeast Ty3 retrotransposon contains a 5'-3' bipartite primer-binding site and encodes nucleocapsid protein NCp9 functionally homologous to HIV-1 NCp7. The Embo Journal. 17: 4873-80. PMID 9707446 DOI: 10.1093/Emboj/17.16.4873  0.461
1998 Sandmeyer S. Targeting Transposition: At Home in the Genome Genome Research. 8: 416-418. PMID 9582185 DOI: 10.1101/Gr.8.5.416  0.402
1998 Dildine SL, Respess J, Jolly D, Sandmeyer SB. A chimeric Ty3/Moloney murine leukemia virus integrase protein is active in vivo Journal of Virology. 72: 4297-4307. PMID 9557720 DOI: 10.1128/Jvi.72.5.4297-4307.1998  0.448
1997 Dildine SL, Sandmeyer SB. Integration of the yeast retrovirus-like element Ty3 upstream of a human tRNA gene expressed in yeast Gene. 194: 227-233. PMID 9272864 DOI: 10.1016/S0378-1119(97)00167-4  0.495
1997 Gu J, Emerman M, Sandmeyer S. Small heat shock protein suppression of Vpr-induced cytoskeletal defects in budding yeast. Molecular and Cellular Biology. 17: 4033-42. PMID 9199338 DOI: 10.1128/Mcb.17.7.4033  0.349
1997 Connolly CM, Sandmeyer SB. RNA polymerase III interferes with Ty3 integration Febs Letters. 405: 305-311. PMID 9108309 DOI: 10.1016/S0014-5793(97)00200-7  0.479
1996 Sandmeyer SB, Menees TM. Morphogenesis at the retrotransposon-retrovirus interface: Gypsy and copia families in yeast and Drosophila Current Topics in Microbiology and Immunology. 214: 261-296. PMID 8791731 DOI: 10.1007/978-3-642-80145-7_9  0.33
1996 Kirchner J, Sandmeyer SB. Ty3 integrase mutants defective in reverse transcription or 3'-end processing of extrachromosomal Ty3 DNA. Journal of Virology. 70: 4737-47. PMID 8676501 DOI: 10.1128/Jvi.70.7.4737-4747.1996  0.469
1996 Orlinsky KJ, Gu J, Hoyt M, Sandmeyer S, Menees TM. Mutations in the Ty3 major homology region affect multiple steps in Ty3 retrotransposition. Journal of Virology. 70: 3440-8. PMID 8648676 DOI: 10.1128/Jvi.70.6.3440-3448.1996  0.462
1996 Menees TM, Sandmeyer SB. Cellular stress inhibits transposition of the yeast retrovirus-like element Ty3 by a ubiquitin-dependent block of virus-like particle formation Proceedings of the National Academy of Sciences of the United States of America. 93: 5629-5634. PMID 8643628 DOI: 10.1073/Pnas.93.11.5629  0.406
1995 Kirchner J, Connolly CM, Sandmeyer SB. Requirement of RNA polymerase III transcription factors for in vitro position-specific integration of a retroviruslike element. Science (New York, N.Y.). 267: 1488-91. PMID 7878467 DOI: 10.1126/Science.7878467  0.538
1995 Kinsey PT, Sandmeyer SB. Ty3 transposes in mating populations of yeast: A novel transposition assay for Ty3 Genetics. 139: 81-94. PMID 7705653  0.396
1994 Menees TM, Sandmeyer SB. Transposition of the yeast retroviruslike element Ty3 is dependent on the cell cycle Molecular and Cellular Biology. 14: 8229-8240. PMID 7969160 DOI: 10.1128/Mcb.14.12.8229  0.498
1994 Orlinsky KJ, Sandmeyer SB. The Cys-His motif of Ty3 NC can be contributed by Gag3 or Gag3-Pol3 polyproteins Journal of Virology. 68: 4152-4166. PMID 7515969 DOI: 10.1128/Jvi.68.7.4152-4166.1994  0.508
1993 Bilanchone VW, Claypool JA, Kinsey PT, Sandmeyer SB. Positive and negative regulatory elements control expression of the yeast retrotransposon Ty3 Genetics. 134: 685-700. PMID 8394262  0.317
1993 Chalker DL, Sandmeyer SB. Sites of RNA polymerase III transcription initiation and Ty3 integration at the U6 gene are positioned by the TATA box Proceedings of the National Academy of Sciences of the United States of America. 90: 4927-4931. PMID 8389458 DOI: 10.1073/Pnas.90.11.4927  0.525
1993 Kirchner J, Sandmeyer S. Proteolytic processing of Ty3 proteins is required for transposition. Journal of Virology. 67: 19-28. PMID 7677953 DOI: 10.1128/Jvi.67.1.19-28.1993  0.483
1992 Hansen LJ, Chalker DL, Orlinsky KJ, Sandmeyer SB. Tye GAG3 and POL3 genes encode the components of intracellular particles Journal of Virology. 66: 1414-1424. PMID 1371165 DOI: 10.1128/Jvi.66.3.1414-1424.1992  0.5
1992 Kirchner J, Sandmeyer SB, Forrest DB. Transposition of a Ty3 GAG3-POL3 fusion mutant is limited by availability of capsid protein. Journal of Virology. 66: 6081-92. PMID 1326658 DOI: 10.1128/Jvi.66.10.6081-6092.1992  0.504
1992 Chalker DL, Sandmeyer SB. Ty3 integrates within the region of RNA polymerase III transcription initiation Genes and Development. 6: 117-128. PMID 1309715 DOI: 10.1101/Gad.6.1.117  0.542
1991 Kinsey PT, Sandmeyer SB. Adjacent pol II and pol III promoters: Transcription of the yeast retrotransposon Ty3 and a target tRNA gene Nucleic Acids Research. 19: 1317-1324. PMID 1851556 DOI: 10.1093/Nar/19.6.1317  0.427
1990 Hansen LJ, Sandmeyer SB. Characterization of a transpositionally active Ty3 element and identification of the Ty3 integrase protein Journal of Virology. 64: 2599-2607. PMID 2159534 DOI: 10.1128/Jvi.64.6.2599-2607.1990  0.455
1990 Sandmeyer SB, Hansen LJ, Chalker DL. Integration specificity of retrotransposons and retroviruses Annual Review of Genetics. 24: 491-518. PMID 1965102 DOI: 10.1146/Annurev.Ge.24.120190.002423  0.473
1990 Chalker DL, Sandmeyer SB. Transfer RNA genes are genomic targets for de novo transposition of the yeast retrotransposan Ty3 Genetics. 126: 837-850. PMID 1963869  0.333
1988 Sandmeyer SB, Bilanchone VW, Clark DJ, Morcos P, Carle GF, Brodeur GM. Sigma elements are position-specific for many different yeast tRNA genes. Nucleic Acids Research. 16: 1499-515. PMID 3279393 DOI: 10.1093/Nar/16.4.1499  0.429
1988 Hansen LJ, Chalker DL, Sandmeyer SB. Ty3, a yeast retrotransposon associated with tRNA genes, has homology to animal retroviruses Molecular and Cellular Biology. 8: 5245-5256. PMID 2854194 DOI: 10.1128/Mcb.8.12.5245  0.499
1988 Clark DJ, Bilanchone VW, Haywood LJ, Dildine SL, Sandmeyer SB. A yeast sigma composite element, TY3, has properties of a retrotransposon. The Journal of Biological Chemistry. 263: 1413-23. PMID 2447089  0.325
1983 Brodeur GM, Sandmeyer SB, Olson MV. Consistent association between sigma elements and tRNA genes in yeast Proceedings of the National Academy of Sciences of the United States of America. 80: 3292-3296. PMID 6344079 DOI: 10.1073/Pnas.80.11.3292  0.642
1982 Sandmeyer SB, Olson MV. Insertion of a repetitive element at the same position in the 5'-flanking regions of two dissimilar yeast tRNA genes Proceedings of the National Academy of Sciences of the United States of America. 79: 7674-7678. PMID 6760201 DOI: 10.1073/Pnas.79.24.7674  0.649
Show low-probability matches.