| Year |
Citation |
Score |
| 2023 |
Uribe G, Salipante SJ, Curtis L, Lieberman JA, Kurosawa K, Cookson BT, Hoogestraat D, Stewart MK, Olmstead T, Bourassa L. Evaluation of Fourier transform-infrared spectroscopy (FT-IR) as a control measure for nosocomial outbreak investigations. Journal of Clinical Microbiology. 61: e0034723. PMID 37787542 DOI: 10.1128/jcm.00347-23 |
0.522 |
|
| 2023 |
Seah YM, Stewart MK, Hoogestraat D, Ryder M, Cookson BT, Salipante SJ, Hoffman NG. Evaluation of Variant Calling Methods for Bacterial Whole-Genome Sequencing Assays. Journal of Clinical Microbiology. e0184222. PMID 37428072 DOI: 10.1128/jcm.01842-22 |
0.52 |
|
| 2020 |
Lieberman JA, Naureckas Li C, Lamb GS, Kane DA, Stewart MK, Mamedov RA, Cookson BT, Salipante SJ. Case Report: Comparison of Plasma Metagenomics to Bacterial PCR in a Case of Prosthetic Valve Endocarditis. Frontiers in Pediatrics. 8: 575674. PMID 33489996 DOI: 10.3389/fped.2020.575674 |
0.549 |
|
| 2019 |
Greninger AL, Addetia A, Starr K, Cybulski RJ, Stewart MK, Salipante SJ, Bryan AB, Cookson B, Gaudreau C, Bekal S, Fang FC. International Spread of Multidrug-Resistant Campylobacter coli in Men who have Sex with Men in Washington State and Quebec, 2015-2018. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 31665255 DOI: 10.1093/Cid/Ciz1060 |
0.555 |
|
| 2019 |
Carpentier SJ, Ni M, Duggan JM, James RG, Cookson BT, Hamerman JA. The signaling adaptor BCAP inhibits NLRP3 and NLRC4 inflammasome activation in macrophages through interactions with Flightless-1. Science Signaling. 12. PMID 31088976 DOI: 10.1126/Scisignal.Aau0615 |
0.365 |
|
| 2019 |
Loomis WP, den Hartigh AB, Cookson BT, Fink SL. Diverse small molecules prevent macrophage lysis during pyroptosis. Cell Death & Disease. 10: 326. PMID 30975978 DOI: 10.1038/S41419-019-1559-4 |
0.31 |
|
| 2016 |
Cummings LA, Kurosawa K, Hoogestraat DR, SenGupta DJ, Candra F, Doyle M, Thielges S, Land TA, Rosenthal CA, Hoffman NG, Salipante SJ, Cookson BT. Clinical Next Generation Sequencing Outperforms Standard Microbiological Culture for Characterizing Polymicrobial Samples. Clinical Chemistry. PMID 27624135 DOI: 10.1373/Clinchem.2016.258806 |
0.339 |
|
| 2016 |
Stewart MK, Cookson BT. Evasion and interference: intracellular pathogens modulate caspase-dependent inflammatory responses. Nature Reviews. Microbiology. 14: 346-59. PMID 27174147 DOI: 10.1038/Nrmicro.2016.50 |
0.626 |
|
| 2015 |
Roach DJ, Burton JN, Lee C, Stackhouse B, Butler-Wu SM, Cookson BT, Shendure J, Salipante SJ. A Year of Infection in the Intensive Care Unit: Prospective Whole Genome Sequencing of Bacterial Clinical Isolates Reveals Cryptic Transmissions and Novel Microbiota. Plos Genetics. 11: e1005413. PMID 26230489 DOI: 10.1371/Journal.Pgen.1005413 |
0.326 |
|
| 2015 |
Salipante SJ, SenGupta DJ, Cummings LA, Land TA, Hoogestraat DR, Cookson BT. Application of whole-genome sequencing for bacterial strain typing in molecular epidemiology. Journal of Clinical Microbiology. 53: 1072-9. PMID 25631811 DOI: 10.1128/Jcm.03385-14 |
0.332 |
|
| 2015 |
Salipante SJ, Roach DJ, Kitzman JO, Snyder MW, Stackhouse B, Butler-Wu SM, Lee C, Cookson BT, Shendure J. Large-scale genomic sequencing of extraintestinal pathogenic Escherichia coli strains. Genome Research. 25: 119-28. PMID 25373147 DOI: 10.1101/Gr.180190.114 |
0.359 |
|
| 2014 |
Loomis WP, Johnson ML, Brasfield A, Blanc MP, Yi J, Miller SI, Cookson BT, Hajjar AM. Temporal and anatomical host resistance to chronic Salmonella infection is quantitatively dictated by Nramp1 and influenced by host genetic background. Plos One. 9: e111763. PMID 25350459 DOI: 10.1371/Journal.Pone.0111763 |
0.375 |
|
| 2014 |
Stewart MK, Cookson BT. Mutually repressing repressor functions and multi-layered cellular heterogeneity regulate the bistable Salmonella fliC census. Molecular Microbiology. 94: 1272-84. PMID 25315056 DOI: 10.1111/Mmi.12828 |
0.577 |
|
| 2014 |
Salipante SJ, Sengupta DJ, Cummings LA, Robinson A, Kurosawa K, Hoogestraat DR, Cookson BT. Whole genome sequencing indicates Corynebacterium jeikeium comprises 4 separate genomospecies and identifies a dominant genomospecies among clinical isolates. International Journal of Medical Microbiology : Ijmm. 304: 1001-10. PMID 25116839 DOI: 10.1016/J.Ijmm.2014.07.003 |
0.317 |
|
| 2013 |
LaRock CN, Cookson BT. Burning down the house: cellular actions during pyroptosis. Plos Pathogens. 9: e1003793. PMID 24367258 DOI: 10.1371/Journal.Ppat.1003793 |
0.7 |
|
| 2013 |
Tchesnokova V, Billig M, Chattopadhyay S, Linardopoulou E, Aprikian P, Roberts PL, Skrivankova V, Johnston B, Gileva A, Igusheva I, Toland A, Riddell K, Rogers P, Qin X, Butler-Wu S, ... Cookson BT, et al. Predictive diagnostics for Escherichia coli infections based on the clonal association of antimicrobial resistance and clinical outcome. Journal of Clinical Microbiology. 51: 2991-9. PMID 23843485 DOI: 10.1128/Jcm.00984-13 |
0.307 |
|
| 2013 |
Salipante SJ, Sengupta DJ, Rosenthal C, Costa G, Spangler J, Sims EH, Jacobs MA, Miller SI, Hoogestraat DR, Cookson BT, McCoy C, Matsen FA, Shendure J, Lee CC, Harkins TT, et al. Rapid 16S rRNA next-generation sequencing of polymicrobial clinical samples for diagnosis of complex bacterial infections. Plos One. 8: e65226. PMID 23734239 DOI: 10.1371/Journal.Pone.0065226 |
0.315 |
|
| 2012 |
LaRock CN, Cookson BT. The Yersinia virulence effector YopM binds caspase-1 to arrest inflammasome assembly and processing. Cell Host & Microbe. 12: 799-805. PMID 23245324 DOI: 10.1016/J.Chom.2012.10.020 |
0.695 |
|
| 2012 |
Stewart MK, Cookson BT. Non-genetic diversity shapes infectious capacity and host resistance. Trends in Microbiology. 20: 461-6. PMID 22889945 DOI: 10.1016/J.Tim.2012.07.003 |
0.617 |
|
| 2012 |
Deatherage BL, Cookson BT. Membrane vesicle release in bacteria, eukaryotes, and archaea: a conserved yet underappreciated aspect of microbial life. Infection and Immunity. 80: 1948-57. PMID 22409932 DOI: 10.1128/Iai.06014-11 |
0.761 |
|
| 2012 |
Weissman SJ, Johnson JR, Tchesnokova V, Billig M, Dykhuizen D, Riddell K, Rogers P, Qin X, Butler-Wu S, Cookson BT, Fang FC, Scholes D, Chattopadhyay S, Sokurenko E. High-resolution two-locus clonal typing of extraintestinal pathogenic Escherichia coli. Applied and Environmental Microbiology. 78: 1353-60. PMID 22226951 DOI: 10.1128/Aem.06663-11 |
0.303 |
|
| 2011 |
Stewart MK, Cummings LA, Johnson ML, Berezow AB, Cookson BT. Regulation of phenotypic heterogeneity permits Salmonella evasion of the host caspase-1 inflammatory response. Proceedings of the National Academy of Sciences of the United States of America. 108: 20742-7. PMID 22143773 DOI: 10.1073/Pnas.1108963108 |
0.618 |
|
| 2011 |
Bergsbaken T, Fink SL, den Hartigh AB, Loomis WP, Cookson BT. Coordinated host responses during pyroptosis: caspase-1-dependent lysosome exocytosis and inflammatory cytokine maturation. Journal of Immunology (Baltimore, Md. : 1950). 187: 2748-54. PMID 21804020 DOI: 10.4049/Jimmunol.1100477 |
0.377 |
|
| 2011 |
Murphy SC, Hoogestraat DR, Sengupta DJ, Prentice J, Chakrapani A, Cookson BT. Molecular diagnosis of cystoisosporiasis using extended-range PCR screening. The Journal of Molecular Diagnostics : Jmd. 13: 359-62. PMID 21458380 DOI: 10.1016/J.Jmoldx.2011.01.007 |
0.324 |
|
| 2010 |
Libby SJ, Brehm MA, Greiner DL, Shultz LD, McClelland M, Smith KD, Cookson BT, Karlinsey JE, Kinkel TL, Porwollik S, Canals R, Cummings LA, Fang FC. Humanized nonobese diabetic-scid IL2rgammanull mice are susceptible to lethal Salmonella Typhi infection. Proceedings of the National Academy of Sciences of the United States of America. 107: 15589-94. PMID 20713716 DOI: 10.1073/Pnas.1005566107 |
0.328 |
|
| 2010 |
Swearingen KE, Loomis WP, Kehimkar B, Cookson BT, Dovichi NJ. Quantification of green fluorescent protein in cellular supernatant by capillary electrophoresis with laser-induced fluorescence detection for measurement of cell death. Talanta. 81: 948-53. PMID 20298877 DOI: 10.1016/J.Talanta.2010.01.041 |
0.333 |
|
| 2010 |
Swearingen KE, Loomis WP, Zheng M, Cookson BT, Dovichi NJ. Proteomic profiling of lipopolysaccharide-activated macrophages by isotope coded affinity tagging. Journal of Proteome Research. 9: 2412-21. PMID 20199111 DOI: 10.1021/Pr901124U |
0.332 |
|
| 2009 |
Cummings LA, Deatherage BL, Cookson BT. Adaptive Immune Responses during Salmonella Infection. Ecosal Plus. 3. PMID 26443770 DOI: 10.1128/ecosalplus.8.8.11 |
0.786 |
|
| 2009 |
Bergsbaken T, Cookson BT. Innate immune response during Yersinia infection: critical modulation of cell death mechanisms through phagocyte activation. Journal of Leukocyte Biology. 86: 1153-8. PMID 19734471 DOI: 10.1189/Jlb.0309146 |
0.462 |
|
| 2009 |
Deatherage BL, Lara JC, Bergsbaken T, Rassoulian Barrett SL, Lara S, Cookson BT. Biogenesis of bacterial membrane vesicles. Molecular Microbiology. 72: 1395-407. PMID 19432795 DOI: 10.1111/J.1365-2958.2009.06731.X |
0.745 |
|
| 2009 |
Bergsbaken T, Fink SL, Cookson BT. Pyroptosis: host cell death and inflammation. Nature Reviews. Microbiology. 7: 99-109. PMID 19148178 DOI: 10.1038/Nrmicro2070 |
0.382 |
|
| 2009 |
Harrington AT, Castellanos JA, Ziedalski TM, Clarridge JE, Cookson BT. Isolation of Bordetella avium and novel Bordetella strain from patients with respiratory disease. Emerging Infectious Diseases. 15: 72-4. PMID 19116056 DOI: 10.3201/Eid1501.071677 |
0.306 |
|
| 2008 |
Fink SL, Bergsbaken T, Cookson BT. Anthrax lethal toxin and Salmonella elicit the common cell death pathway of caspase-1-dependent pyroptosis via distinct mechanisms. Proceedings of the National Academy of Sciences of the United States of America. 105: 4312-7. PMID 18337499 DOI: 10.1073/Pnas.0707370105 |
0.362 |
|
| 2008 |
Alaniz RC, Deatherage BL, Lara JC, Cookson BT. Membrane vesicles are immunogenic facsimiles of Salmonella typhimurium that potently activate dendritic cells, prime B and T cell responses, and stimulate protective immunity in vivo (Journal of Immunology (2007) 179, (7692-7701)) Journal of Immunology. 180: 3612. |
0.77 |
|
| 2007 |
Alaniz RC, Deatherage BL, Lara JC, Cookson BT. Membrane vesicles are immunogenic facsimiles of Salmonella typhimurium that potently activate dendritic cells, prime B and T cell responses, and stimulate protective immunity in vivo. Journal of Immunology (Baltimore, Md. : 1950). 179: 7692-701. PMID 18025215 DOI: 10.4049/Jimmunol.179.11.7692 |
0.785 |
|
| 2007 |
Bergsbaken T, Cookson BT. Macrophage activation redirects yersinia-infected host cell death from apoptosis to caspase-1-dependent pyroptosis. Plos Pathogens. 3: e161. PMID 17983266 DOI: 10.1371/Journal.Ppat.0030161 |
0.386 |
|
| 2007 |
Fink SL, Cookson BT. Pyroptosis and host cell death responses during Salmonella infection. Cellular Microbiology. 9: 2562-70. PMID 17714514 DOI: 10.1111/J.1462-5822.2007.01036.X |
0.426 |
|
| 2006 |
Alaniz RC, Cummings LA, Bergman MA, Rassoulian-Barrett SL, Cookson BT. Salmonella typhimurium coordinately regulates FliC location and reduces dendritic cell activation and antigen presentation to CD4+ T cells. Journal of Immunology (Baltimore, Md. : 1950). 177: 3983-93. PMID 16951361 DOI: 10.4049/Jimmunol.177.6.3983 |
0.719 |
|
| 2006 |
Fink SL, Cookson BT. Caspase-1-dependent pore formation during pyroptosis leads to osmotic lysis of infected host macrophages. Cellular Microbiology. 8: 1812-25. PMID 16824040 DOI: 10.1111/J.1462-5822.2006.00751.X |
0.421 |
|
| 2006 |
Cummings LA, Wilkerson WD, Bergsbaken T, Cookson BT. In vivo, fliC expression by Salmonella enterica serovar Typhimurium is heterogeneous, regulated by ClpX, and anatomically restricted. Molecular Microbiology. 61: 795-809. PMID 16803592 DOI: 10.1111/J.1365-2958.2006.05271.X |
0.391 |
|
| 2005 |
Bergman MA, Cummings LA, Alaniz RC, Mayeda L, Fellnerova I, Cookson BT. CD4+-T-cell responses generated during murine Salmonella enterica serovar Typhimurium infection are directed towards multiple epitopes within the natural antigen FliC. Infection and Immunity. 73: 7226-35. PMID 16239517 DOI: 10.1128/Iai.73.11.7226-7235.2005 |
0.709 |
|
| 2005 |
Nichols WG, Prentice J, Houze Y, Carlson L, Cookson BT. Fatal pulmonary infection associated with a novel organism, "para-streptomyces abscessus". Journal of Clinical Microbiology. 43: 5376-9. PMID 16208023 DOI: 10.1128/Jcm.43.10.5376-5379.2005 |
0.331 |
|
| 2005 |
Andersen-Nissen E, Smith KD, Strobe KL, Barrett SL, Cookson BT, Logan SM, Aderem A. Evasion of Toll-like receptor 5 by flagellated bacteria. Proceedings of the National Academy of Sciences of the United States of America. 102: 9247-52. PMID 15956202 DOI: 10.1073/Pnas.0502040102 |
0.385 |
|
| 2005 |
Cummings LA, Barrett SL, Wilkerson WD, Fellnerova I, Cookson BT. FliC-specific CD4+ T cell responses are restricted by bacterial regulation of antigen expression. Journal of Immunology (Baltimore, Md. : 1950). 174: 7929-38. PMID 15944299 DOI: 10.4049/Jimmunol.174.12.7929 |
0.447 |
|
| 2005 |
Fink SL, Cookson BT. Apoptosis, pyroptosis, and necrosis: mechanistic description of dead and dying eukaryotic cells. Infection and Immunity. 73: 1907-16. PMID 15784530 DOI: 10.1128/Iai.73.4.1907-1916.2005 |
0.387 |
|
| 2005 |
Bergman MA, Cummings LA, Barrett SL, Smith KD, Lara JC, Aderem A, Cookson BT. CD4+ T cells and toll-like receptors recognize Salmonella antigens expressed in bacterial surface organelles. Infection and Immunity. 73: 1350-6. PMID 15731032 DOI: 10.1128/Iai.73.3.1350-1356.2005 |
0.723 |
|
| 2004 |
Pottumarthy S, Schapiro JM, Prentice JL, Houze YB, Swanzy SR, Fang FC, Cookson BT. Clinical isolates of Staphylococcus intermedius masquerading as methicillin-resistant Staphylococcus aureus. Journal of Clinical Microbiology. 42: 5881-4. PMID 15583331 DOI: 10.1128/Jcm.42.12.5881-5884.2004 |
0.313 |
|
| 2004 |
Vazquez-Torres A, Vallance BA, Bergman MA, Finlay BB, Cookson BT, Jones-Carson J, Fang FC. Toll-like receptor 4 dependence of innate and adaptive immunity to Salmonella: importance of the Kupffer cell network. Journal of Immunology (Baltimore, Md. : 1950). 172: 6202-8. PMID 15128808 DOI: 10.4049/Jimmunol.172.10.6202 |
0.707 |
|
| 2004 |
Smith KD, Andersen-Nissen E, Hayashi F, Strobe K, Bergman MA, Barrett SLR, Cookson BT, Aderem A. Erratum: Corrigendum: Toll-like receptor 5 recognizes a conserved site on flagellin required for protofilament formation and bacterial motility Nature Immunology. 5: 451-451. DOI: 10.1038/Ni0404-451 |
0.647 |
|
| 2003 |
Smith KD, Andersen-Nissen E, Hayashi F, Strobe K, Bergman MA, Barrett SL, Cookson BT, Aderem A. Toll-like receptor 5 recognizes a conserved site on flagellin required for protofilament formation and bacterial motility. Nature Immunology. 4: 1247-53. PMID 14625549 DOI: 10.1038/Ni1011 |
0.685 |
|
| 2003 |
Novicki TJ, LaFe K, Bui L, Bui U, Geise R, Marr K, Cookson BT. Genetic diversity among clinical isolates of Acremonium strictum determined during an investigation of a fatal mycosis. Journal of Clinical Microbiology. 41: 2623-8. PMID 12791889 DOI: 10.1128/Jcm.41.6.2623-2628.2003 |
0.303 |
|
| 2003 |
Pottumarthy S, Limaye AP, Prentice JL, Houze YB, Swanzy SR, Cookson BT. Nocardia veterana, a new emerging pathogen. Journal of Clinical Microbiology. 41: 1705-9. PMID 12682164 DOI: 10.1128/Jcm.41.4.1705-1709.2003 |
0.301 |
|
| 2001 |
Cookson BT, Cummings LA, Rassoulian Barrett SL. Bacterial antigens elicit T cell responses via adaptive and transitional immune recognition Current Opinion in Microbiology. 4: 267-273. PMID 11378477 DOI: 10.1016/S1369-5274(00)00201-0 |
0.433 |
|
| 2000 |
Brennan MA, Cookson BT. Salmonella induces macrophage death by caspase-1-dependent necrosis Molecular Microbiology. 38: 31-40. PMID 11029688 DOI: 10.1046/J.1365-2958.2000.02103.X |
0.36 |
|
| 2000 |
Kattar MM, Chavez JF, Limaye AP, Rassoulian-Barrett SL, Yarfitz SL, Carlson LC, Houze Y, Swanzy S, Wood BL, Cookson BT. Application of 16S rRNA gene sequencing to identify Bordetella hinzii as the causative agent of fatal septicemia. Journal of Clinical Microbiology. 38: 789-94. PMID 10655386 DOI: 10.1128/Jcm.38.2.789-794.2000 |
0.31 |
|
| 2000 |
McSorley SJ, Cookson BT, Jenkins MK. Characterization of CD4+ T cell responses during natural infection with Salmonella typhimurium. Journal of Immunology (Baltimore, Md. : 1950). 164: 986-93. PMID 10623848 DOI: 10.4049/Jimmunol.164.2.986 |
0.393 |
|
| 1997 |
Cookson BT, Bevan MJ. Identification of a Natural T Cell Epitope Presented by Salmonella-Infected Macrophages and Recognized by T Cells from Orally Immunized Mice Journal of Immunology. 158: 4310-4319. PMID 9126993 |
0.336 |
|
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