Warren Gish - Publications

Affiliations: 
Washington University, Saint Louis, St. Louis, MO 
Area:
Computer Science, Genetics

21 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2007 Havlioglu N, Wang J, Fushimi K, Vibranovski MD, Kan Z, Gish W, Fedorov A, Long M, Wu JY. An intronic signal for alternative splicing in the human genome. Plos One. 2: e1246. PMID 18043753 DOI: 10.1371/Journal.Pone.0001246  0.425
2006 Zhang M, Gish W. Improved spliced alignment from an information theoretic approach. Bioinformatics (Oxford, England). 22: 13-20. PMID 16267086 DOI: 10.1093/Bioinformatics/Bti748  0.53
2004 Messina DN, Glasscock J, Gish W, Lovett M. An ORFeome-based analysis of human transcription factor genes and the construction of a microarray to interrogate their expression. Genome Research. 14: 2041-7. PMID 15489324 DOI: 10.1101/Gr.2584104  0.385
2003 Hillier LW, Fulton RS, Fulton LA, Graves TA, Pepin KH, Wagner-McPherson C, Layman D, Maas J, Jaeger S, Walker R, Wylie K, Sekhon M, Becker MC, O'Laughlin MD, Schaller ME, ... ... Gish WR, et al. The DNA sequence of human chromosome 7. Nature. 424: 157-64. PMID 12853948 DOI: 10.1038/Nature01782  0.405
2003 Lopez R, Silventoinen V, Robinson S, Kibria A, Gish W. WU-Blast2 server at the European Bioinformatics Institute. Nucleic Acids Research. 31: 3795-8. PMID 12824421 DOI: 10.1093/Nar/Gkg573  0.399
2002 Kan Z, States D, Gish W. Selecting for functional alternative splices in ESTs. Genome Research. 12: 1837-45. PMID 12466287 DOI: 10.1101/Gr.764102  0.443
2002 Rouchka EC, Gish W, States DJ. Comparison of whole genome assemblies of the human genome. Nucleic Acids Research. 30: 5004-14. PMID 12434005 DOI: 10.1093/Nar/Gkf633  0.418
2001 Cliften PF, Hillier LW, Fulton L, Graves T, Miner T, Gish WR, Waterston RH, Johnston M. Surveying Saccharomyces genomes to identify functional elements by comparative DNA sequence analysis Genome Research. 11: 1175-1186. PMID 11435399 DOI: 10.1101/Gr.182901  0.451
2001 Kan Z, Rouchka EC, Gish WR, States DJ. Gene structure prediction and alternative splicing analysis using genomically aligned ESTs. Genome Research. 11: 889-900. PMID 11337482 DOI: 10.1101/Gr.155001  0.452
2001 Lander ES, Linton LM, Birren B, Nusbaum C, Zody MC, Baldwin J, Devon K, Dewar K, Doyle M, FitzHugh W, Funke R, Gage D, Harris K, Heaford A, Howland J, ... ... Gish WR, et al. Initial sequencing and analysis of the human genome. Nature. 409: 860-921. PMID 11237011 DOI: 10.1038/35057062  0.421
2000 Korf I, Gish W. MPBLAST: Improved BLAST performance with multiplexed queries Bioinformatics. 16: 1052-1053. PMID 11159321 DOI: 10.1093/Bioinformatics/16.11.1052  0.496
2000 Bedell JA, Korf I, Gish W. MaskerAid: A performance enhancement to RepeatMasker Bioinformatics. 16: 1040-1041. PMID 11159316 DOI: 10.1093/Bioinformatics/16.11.1040  0.435
2000 Kan Z, Gish W, Rouchka E, Glasscock J, States D. UTR reconstruction and analysis using genomically aligned EST sequences. Proceedings / ... International Conference On Intelligent Systems For Molecular Biology ; Ismb. International Conference On Intelligent Systems For Molecular Biology. 8: 218-27. PMID 10977083  0.46
1999 Marth GT, Korf I, Yandell MD, Yeh RT, Gu Z, Zakeri H, Stitziel NO, Hillier L, Kwok PY, Gish WR. A general approach to single-nucleotide polymorphism discovery. Nature Genetics. 23: 452-6. PMID 10581034 DOI: 10.1038/70570  0.498
1996 Hillier L, Lennon G, Becker M, Bonaldo MF, Chiapelli B, Chissoe S, Dietrich N, DuBuque T, Favello A, Gish W, Hawkins M, Hultman M, Kucaba T, Lacy M, Le M, et al. Generation and analysis of 280,000 human expressed sequence tags Genome Research. 6: 807-828. PMID 8889549 DOI: 10.1101/Gr.6.9.807  0.52
1996 Altschul SF, Gish W. [27] Local alignment statistics Methods in Enzymology. 266: 460-480. PMID 8743700 DOI: 10.1016/S0076-6879(96)66029-7  0.408
1994 States DJ, Gish W. Combined use of sequence similarity and codon bias for coding region identification. Journal of Computational Biology : a Journal of Computational Molecular Cell Biology. 1: 39-50. PMID 8790452 DOI: 10.1089/Cmb.1994.1.39  0.456
1994 Altschul SF, Boguski MS, Gish W, Wootton JC. Issues in searching molecular sequence databases Nature Genetics. 6: 119-129. PMID 8162065 DOI: 10.1038/Ng0294-119  0.522
1993 Gish W, States DJ. Identification of protein coding regions by database similarity search. Nature Genetics. 3: 266-72. PMID 8485583 DOI: 10.1038/Ng0393-266  0.537
1991 States DJ, Gish W, Altschul SF. Improved sensitivity of nucleic acid database searches using application-specific scoring matrices Methods. 3: 66-70. DOI: 10.1016/S1046-2023(05)80165-3  0.436
1990 Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. Basic local alignment search tool. Journal of Molecular Biology. 215: 403-10. PMID 2231712 DOI: 10.1016/S0022-2836(05)80360-2  0.515
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