| Year |
Citation |
Score |
| 2024 |
Kotliar D, Raju S, Tabrizi S, Odia I, Goba A, Momoh M, Sandi JD, Nair P, Phelan E, Tariyal R, Eromon PE, Mehta S, Robles-Sikisaka R, Siddle KJ, Stremlau M, et al. Genome-wide association study identifies human genetic variants associated with fatal outcome from Lassa fever. Nature Microbiology. PMID 38326571 DOI: 10.1038/s41564-023-01589-3 |
0.313 |
|
| 2020 |
Rotival M, Siddle KJ, Silvert M, Pothlichet J, Quach H, Quintana-Murci L. Population variation in miRNAs and isomiRs and their impact on human immunity to infection. Genome Biology. 21: 187. PMID 32731901 DOI: 10.1186/S13059-020-02098-W |
0.697 |
|
| 2020 |
Ajogbasile FV, Oguzie JU, Oluniyi PE, Eromon PE, Uwanibe JN, Mehta SB, Siddle KJ, Odia I, Winnicki SM, Akpede N, Akpede G, Okogbenin S, Ogbaini-Emovon E, MacInnis BL, Folarin OA, et al. Real-time Metagenomic Analysis of Undiagnosed Fever Cases Unveils a Yellow Fever Outbreak in Edo State, Nigeria. Scientific Reports. 10: 3180. PMID 32081931 DOI: 10.1038/S41598-020-59880-W |
0.301 |
|
| 2020 |
Wohl S, Metsky HC, Schaffner SF, Piantadosi A, Burns M, Lewnard JA, Chak B, Krasilnikova LA, Siddle KJ, Matranga CB, Bankamp B, Hennigan S, Sabina B, Byrne EH, McNall RJ, et al. Combining genomics and epidemiology to track mumps virus transmission in the United States. Plos Biology. 18: e3000611. PMID 32045407 DOI: 10.1371/Journal.Pbio.3000611 |
0.356 |
|
| 2019 |
Lopez M, Choin J, Sikora M, Siddle K, Harmant C, Costa HA, Silvert M, Mouguiama-Daouda P, Hombert JM, Froment A, Le Bomin S, Perry GH, Barreiro LB, Bustamante CD, Verdu P, et al. Genomic Evidence for Local Adaptation of Hunter-Gatherers to the African Rainforest. Current Biology : Cb. PMID 31402299 DOI: 10.1016/J.Cub.2019.07.013 |
0.726 |
|
| 2019 |
Metsky HC, Siddle KJ, Gladden-Young A, Qu J, Yang DK, Brehio P, Goldfarb A, Piantadosi A, Wohl S, Carter A, Lin AE, Barnes KG, Tully DC, Corleis B, Hennigan S, et al. Capturing sequence diversity in metagenomes with comprehensive and scalable probe design. Nature Biotechnology. 37: 160-168. PMID 30718881 DOI: 10.1038/S41587-018-0006-X |
0.346 |
|
| 2018 |
Siddle KJ, Eromon P, Barnes KG, Mehta S, Oguzie JU, Odia I, Schaffner SF, Winnicki SM, Shah RR, Qu J, Wohl S, Brehio P, Iruolagbe C, Aiyepada J, Uyigue E, et al. Genomic Analysis of Lassa Virus during an Increase in Cases in Nigeria in 2018. The New England Journal of Medicine. PMID 30332564 DOI: 10.1056/Nejmoa1804498 |
0.369 |
|
| 2017 |
Nejad C, Pillman KA, Siddle KJ, Pepin G, Änkö ML, McCoy CE, Beilharz T, Quintana-Murci L, Goodall GJ, Bracken CP, Gantier MP. miR-222 isoforms are differentially regulated by type-I interferon. Rna (New York, N.Y.). PMID 29263133 DOI: 10.1261/Rna.064550.117 |
0.656 |
|
| 2016 |
Pai AA, Baharian G, Pagé Sabourin A, Brinkworth JF, Nédélec Y, Foley JW, Grenier JC, Siddle KJ, Dumaine A, Yotova V, Johnson ZP, Lanford RE, Burge CB, Barreiro LB. Widespread Shortening of 3' Untranslated Regions and Increased Exon Inclusion Are Evolutionarily Conserved Features of Innate Immune Responses to Infection. Plos Genetics. 12: e1006338. PMID 27690314 DOI: 10.1371/Journal.Pgen.1006338 |
0.676 |
|
| 2015 |
Fagny M, Patin E, MacIsaac JL, Rotival M, Flutre T, Jones MJ, Siddle KJ, Quach H, Harmant C, McEwen LM, Froment A, Heyer E, Gessain A, Betsem E, Mouguiama-Daouda P, et al. The epigenomic landscape of African rainforest hunter-gatherers and farmers. Nature Communications. 6: 10047. PMID 26616214 DOI: 10.1038/Ncomms10047 |
0.676 |
|
| 2015 |
Siddle KJ, Tailleux L, Deschamps M, Loh YHE, Deluen C, Gicquel B, Antoniewski C, Barreiro LB, Farinelli L, Quintana-Murci L. Bacterial Infection Drives the Expression Dynamics of microRNAs and Their isomiRs Plos Genetics. 11. PMID 25793259 DOI: 10.1371/Journal.Pgen.1005064 |
0.69 |
|
| 2014 |
Siddle KJ, Quintana-Murci L. The Red Queen's long race: human adaptation to pathogen pressure. Current Opinion in Genetics & Development. 29: 31-8. PMID 25170983 DOI: 10.1016/J.Gde.2014.07.004 |
0.551 |
|
| 2014 |
Patin E, Siddle KJ, Laval G, Quach H, Harmant C, Becker N, Froment A, Régnault B, Lemée L, Gravel S, Hombert JM, Van der Veen L, Dominy NJ, Perry GH, Barreiro LB, et al. The impact of agricultural emergence on the genetic history of African rainforest hunter-gatherers and agriculturalists. Nature Communications. 5: 3163. PMID 24495941 DOI: 10.1038/Ncomms4163 |
0.724 |
|
| 2014 |
Siddle KJ, Deschamps M, Tailleux L, Nédélec Y, Pothlichet J, Lugo-Villarino G, Libri V, Gicquel B, Neyrolles O, Laval G, Patin E, Barreiro LB, Quintana-Murci L. A genomic portrait of the genetic architecture and regulatory impact of microRNA expression in response to infection. Genome Research. 24: 850-9. PMID 24482540 DOI: 10.1101/Gr.161471.113 |
0.661 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2018 |
Choi K, Ryu H, Siddle KJ, Piantadosi A, Freimark L, Park DJ, Sabeti P, Han J. Negative Selection by Spiral Inertial Microfluidics Improves Viral Recovery and Sequencing from Blood. Analytical Chemistry. PMID 29536737 DOI: 10.1021/Acs.Analchem.7B05200 |
0.298 |
|
| 2020 |
Boisen ML, Uyigue E, Aiyepada J, Siddle KJ, Oestereich L, Nelson DKS, Bush DJ, Rowland MM, Heinrich ML, Eromon P, Kayode AT, Odia I, Adomeh DI, Muoebonam EB, Akhilomen P, et al. Field evaluation of a Pan-Lassa rapid diagnostic test during the 2018 Nigerian Lassa fever outbreak. Scientific Reports. 10: 8724. PMID 32457420 DOI: 10.1038/S41598-020-65736-0 |
0.271 |
|
| 2020 |
Klitting R, Mehta SB, Oguzie JU, Oluniyi PE, Pauthner MG, Siddle KJ, Andersen KG, Happi CT, Sabeti PC. Lassa Virus Genetics. Current Topics in Microbiology and Immunology. PMID 32418034 DOI: 10.1007/82_2020_212 |
0.268 |
|
| 2012 |
Scholes C, Siddle K, Ducourneau A, Crivellaro F, Järve M, Rootsi S, Bellatti M, Tabbada K, Mormina M, Reidla M, Villems R, Kivisild T, Lahr MM, Migliano AB. Genetic diversity and evidence for population admixture in Batak Negritos from Palawan. American Journal of Physical Anthropology. 146: 62-72. PMID 21796613 DOI: 10.1002/ajpa.21544 |
0.264 |
|
| 2020 |
Ndiaye T, Sy M, Gaye A, Siddle KJ, Park DJ, Bei AK, Deme AB, Mbaye A, Dieye B, Ndiaye YD, Ndiaye IM, Diallo MA, Diongue K, Volkman SK, Badiane AS, et al. Molecular epidemiology of Plasmodium falciparum by multiplexed amplicon deep sequencing in Senegal. Malaria Journal. 19: 403. PMID 33172455 DOI: 10.1186/s12936-020-03471-7 |
0.262 |
|
| 2023 |
Normandin E, Triana S, Raju SS, Lan TCT, Lagerborg K, Rudy M, Adams GC, DeRuff KC, Logue J, Liu D, Strebinger D, Rao A, Messer KS, Sacks M, Adams RD, ... ... Siddle KJ, et al. Natural history of Ebola virus disease in rhesus monkeys shows viral variant emergence dynamics and tissue-specific host responses. Cell Genomics. 3: 100440. PMID 38169842 DOI: 10.1016/j.xgen.2023.100440 |
0.259 |
|
| 2017 |
Barnes KG, Kindrachuk J, Lin AE, Wohl S, Qu J, Tostenson SD, Dorman WR, Busby M, Siddle KJ, Luo CY, Matranga CB, Davey RT, Sabeti PC, Chertow DS. Evidence of Ebola Virus Replication and High Concentration in Semen of a Patient During Recovery. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 28582513 DOI: 10.1093/Cid/Cix518 |
0.251 |
|
| 2021 |
Botti-Lodovico Y, Nair P, Nosamiefan D, Stremlau M, Schaffner S, Agignoae SV, Aiyepada JO, Ajogbasile FV, Akpede GO, Alhasan F, Andersen KG, Asogun DA, Ayodeji OO, Badiane AS, Barnes K, ... ... Siddle K, et al. The Origins and Future of Sentinel: An Early-Warning System for Pandemic Preemption and Response. Viruses. 13. PMID 34452470 DOI: 10.3390/v13081605 |
0.25 |
|
| 2020 |
Barnes KG, Lachenauer AE, Nitido A, Siddiqui S, Gross R, Beitzel B, Siddle KJ, Freije CA, Dighero-Kemp B, Mehta SB, Carter A, Uwanibe J, Ajogbasile F, Olumade T, Odia I, et al. Deployable CRISPR-Cas13a diagnostic tools to detect and report Ebola and Lassa virus cases in real-time. Nature Communications. 11: 4131. PMID 32807807 DOI: 10.1038/S41467-020-17994-9 |
0.248 |
|
| 2018 |
Boisen ML, Hartnett JN, Shaffer JG, Goba A, Momoh M, Sandi JD, Fullah M, Nelson DKS, Bush DJ, Rowland MM, Heinrich ML, Koval AP, Cross RW, Barnes KG, Lachenauer AE, ... ... Siddle KJ, et al. Field validation of recombinant antigen immunoassays for diagnosis of Lassa fever. Scientific Reports. 8: 5939. PMID 29651117 DOI: 10.1038/S41598-018-24246-W |
0.248 |
|
| 2023 |
Oguzie JU, Petros BA, Oluniyi PE, Mehta SB, Eromon PE, Nair P, Adewale-Fasoro O, Ifoga PD, Odia I, Pastusiak A, Gbemisola OS, Aiyepada JO, Uyigue EA, Edamhande AP, Blessing O, ... ... Siddle KJ, et al. Metagenomic surveillance uncovers diverse and novel viral taxa in febrile patients from Nigeria. Nature Communications. 14: 4693. PMID 37542071 DOI: 10.1038/s41467-023-40247-4 |
0.24 |
|
| 2021 |
Gaye A, Ndiaye T, Sy M, Deme AB, Thiaw AB, Sene A, Ndiaye C, Diedhiou Y, Mbaye AM, Ndiaye I, Tomkins-Tinch C, Gomis JF, Badiane AS, MacInnis B, Park DJ, ... ... Siddle KJ, et al. Genomic investigation of a dengue virus outbreak in Thiès, Senegal, in 2018. Scientific Reports. 11: 10321. PMID 33990632 DOI: 10.1038/s41598-021-89070-1 |
0.238 |
|
| 2019 |
Ye SH, Siddle KJ, Park DJ, Sabeti PC. Benchmarking Metagenomics Tools for Taxonomic Classification. Cell. 178: 779-794. PMID 31398336 DOI: 10.1016/J.Cell.2019.07.010 |
0.231 |
|
| 2023 |
Santus L, Sopena-Rios M, García-Pérez R, Lin AE, Adams GC, Barnes KG, Siddle KJ, Wohl S, Reverter F, Rinn JL, Bennett RS, Hensley LE, Sabeti PC, Melé M. Single-cell profiling of lncRNA expression during Ebola virus infection in rhesus macaques. Nature Communications. 14: 3866. PMID 37391481 DOI: 10.1038/s41467-023-39627-7 |
0.229 |
|
| 2020 |
Lemieux JE, Siddle KJ, Shaw BM, Loreth C, Schaffner SF, Gladden-Young A, Adams G, Fink T, Tomkins-Tinch CH, Krasilnikova LA, DeRuff KC, Rudy M, Bauer MR, Lagerborg KA, Normandin E, et al. Phylogenetic analysis of SARS-CoV-2 in Boston highlights the impact of superspreading events. Science (New York, N.Y.). PMID 33303686 DOI: 10.1126/science.abe3261 |
0.22 |
|
| 2022 |
Tegally H, San JE, Cotten M, Moir M, Tegomoh B, Mboowa G, Martin DP, Baxter C, Lambisia AW, Diallo A, Amoako DG, Diagne MM, Sisay A, Zekri AN, Gueye AS, ... ... Siddle KJ, et al. The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance. Science (New York, N.Y.). eabq5358. PMID 36108049 DOI: 10.1126/science.abq5358 |
0.219 |
|
| 2020 |
Lemieux J, Siddle KJ, Shaw BM, Loreth C, Schaffner S, Gladden-Young A, Adams G, Fink T, Tomkins-Tinch CH, Krasilnikova LA, Deruff KC, Rudy M, Bauer MR, Lagerborg KA, Normandin E, et al. Phylogenetic analysis of SARS-CoV-2 in the Boston area highlights the role of recurrent importation and superspreading events. Medrxiv : the Preprint Server For Health Sciences. PMID 32869040 DOI: 10.1101/2020.08.23.20178236 |
0.216 |
|
| 2023 |
Adams G, Moreno GK, Petros BA, Uddin R, Levine Z, Kotzen B, Messer K, Dobbins ST, DeRuff KC, Loreth C, Brock-Fisher T, Schaffner SF, Chaluvadi S, Kanjilal S, Luban J, ... ... Siddle KJ, et al. The 2022 RSV surge was driven by multiple viral lineages. Medrxiv : the Preprint Server For Health Sciences. PMID 36656774 DOI: 10.1101/2023.01.04.23284195 |
0.2 |
|
| 2021 |
Siddle KJ, Krasilnikova LA, Moreno GK, Schaffner SF, Vostok J, Fitzgerald NA, Lemieux JE, Barkas N, Loreth C, Specht I, Tomkins-Tinch CH, Silbert J, Schaeffer B, Taylor BP, Loftness B, et al. Evidence of transmission from fully vaccinated individuals in a large outbreak of the SARS-CoV-2 Delta variant in Provincetown, Massachusetts. Medrxiv : the Preprint Server For Health Sciences. PMID 34704102 DOI: 10.1101/2021.10.20.21265137 |
0.193 |
|
| 2022 |
Turbett SE, Tomkins-Tinch CH, Anahtar MN, Dugdale CM, Hyle EP, Shenoy ES, Shaw B, Egbuonu K, Bowman KA, Zachary KC, Adams GC, Hooper DC, Ryan ET, LaRocque RC, Bassett IV, ... ... Siddle KJ, et al. Distinguishing SARS-CoV-2 persistence and reinfection: A retrospective cohort study. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 36268576 DOI: 10.1093/cid/ciac830 |
0.192 |
|
| 2023 |
Normandin E, Rudy M, Barkas N, Schaffner SF, Levine Z, Padera RF, Babadi M, Mukerji SS, Park DJ, MacInnis BL, Siddle KJ, Sabeti PC, Solomon IH. High-depth sequencing characterization of viral dynamics across tissues in fatal COVID-19 reveals compartmentalized infection. Nature Communications. 14: 574. PMID 36732505 DOI: 10.1038/s41467-022-34256-y |
0.187 |
|
| 2021 |
Earnest R, Uddin R, Matluk N, Renzette N, Siddle KJ, Loreth C, Adams G, Tomkins-Tinch CH, Petrone ME, Rothman JE, Breban MI, Koch RT, Billig K, Fauver JR, Vogels CBF, et al. Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA. Medrxiv : the Preprint Server For Health Sciences. PMID 34642698 DOI: 10.1101/2021.10.06.21264641 |
0.185 |
|
| 2023 |
Olawoye IB, Oluniyi PE, Oguzie JU, Uwanibe JN, Kayode TA, Olumade TJ, Ajogbasile FV, Parker E, Eromon PE, Abechi P, Sobajo TA, Ugwu CA, George UE, Ayoade F, Akano K, ... ... Siddle KJ, et al. Emergence and spread of two SARS-CoV-2 variants of interest in Nigeria. Nature Communications. 14: 811. PMID 36781860 DOI: 10.1038/s41467-023-36449-5 |
0.179 |
|
| 2021 |
Wilkinson E, Giovanetti M, Tegally H, San JE, Lessells R, Cuadros D, Martin DP, Rasmussen DA, Zekri AN, Sangare AK, Ouedraogo AS, Sesay AK, Priscilla A, Kemi AS, Olubusuyi AM, ... ... Siddle K, et al. A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa. Science (New York, N.Y.). 374: 423-431. PMID 34672751 DOI: 10.1126/science.abj4336 |
0.178 |
|
| 2023 |
Levine ZC, Sene A, Mkandawire W, Deme AB, Ndiaye T, Sy M, Gaye A, Diedhiou Y, Mbaye AM, Ndiaye I, Gomis J, Ndiop M, Sene D, Paye MF, MacInnis B, ... ... Siddle KJ, et al. Improving diagnosis of non-malarial fevers in Senegal: and the contribution of tick-borne bacteria. Medrxiv : the Preprint Server For Health Sciences. PMID 37662407 DOI: 10.1101/2023.08.24.23294564 |
0.178 |
|
| 2024 |
Levine ZC, Sene A, Mkandawire W, Deme AB, Ndiaye T, Sy M, Gaye A, Diedhiou Y, Mbaye AM, Ndiaye IM, Gomis J, Ndiop M, Sene D, Faye Paye M, MacInnis BL, ... ... Siddle KJ, et al. Investigating the etiologies of non-malarial febrile illness in Senegal using metagenomic sequencing. Nature Communications. 15: 747. PMID 38272885 DOI: 10.1038/s41467-024-44800-7 |
0.17 |
|
| 2021 |
Lagerborg KA, Normandin E, Bauer MR, Adams G, Figueroa K, Loreth C, Gladden-Young A, Shaw BM, Pearlman LR, Berenzy D, Dewey HB, Kales S, Dobbins ST, Shenoy ES, Hooper D, ... ... Siddle KJ, et al. Synthetic DNA spike-ins (SDSIs) enable sample tracking and detection of inter-sample contamination in SARS-CoV-2 sequencing workflows. Nature Microbiology. PMID 34907347 DOI: 10.1038/s41564-021-01019-2 |
0.169 |
|
| 2022 |
Earnest R, Uddin R, Matluk N, Renzette N, Turbett SE, Siddle KJ, Loreth C, Adams G, Tomkins-Tinch CH, Petrone ME, Rothman JE, Breban MI, Koch RT, Billig K, Fauver JR, et al. Comparative transmissibility of SARS-CoV-2 variants Delta and Alpha in New England, USA. Cell Reports. Medicine. 3: 100583. PMID 35480627 DOI: 10.1016/j.xcrm.2022.100583 |
0.161 |
|
| 2021 |
Lagerborg KA, Normandin E, Bauer MR, Adams G, Figueroa K, Loreth C, Gladden-Young A, Shaw B, Pearlman L, Shenoy ES, Hooper D, Pierce VM, Zachary KC, Park DJ, MacInnis BL, ... ... Siddle KJ, et al. DNA spike-ins enable confident interpretation of SARS-CoV-2 genomic data from amplicon-based sequencing. Biorxiv : the Preprint Server For Biology. PMID 33758855 DOI: 10.1101/2021.03.16.435654 |
0.156 |
|
| 2021 |
Delorey TM, Ziegler CGK, Heimberg G, Normand R, Yang Y, Segerstolpe A, Abbondanza D, Fleming SJ, Subramanian A, Montoro DT, Jagadeesh KA, Dey KK, Sen P, Slyper M, Pita-Juárez YH, ... ... Siddle KJ, et al. A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2. Biorxiv : the Preprint Server For Biology. PMID 33655247 DOI: 10.1101/2021.02.25.430130 |
0.149 |
|
| 2023 |
Normandin E, Valizadeh N, Rudmann EA, Uddin R, Dobbins ST, MacInnis BL, Padera RF, Siddle KJ, Lemieux JE, Sabeti PC, Mukerji SS, Solomon IH. Neuropathological features of SARS-CoV-2 delta and omicron variants. Journal of Neuropathology and Experimental Neurology. 82: 283-295. PMID 36847705 DOI: 10.1093/jnen/nlad015 |
0.147 |
|
| 2021 |
Siddle KJ, Krasilnikova LA, Moreno GK, Schaffner SF, Vostok J, Fitzgerald NA, Lemieux JE, Barkas N, Loreth C, Specht I, Tomkins-Tinch CH, Paull JS, Schaeffer B, Taylor BP, Loftness B, et al. Transmission from vaccinated individuals in a large SARS-CoV-2 Delta variant outbreak. Cell. PMID 35051367 DOI: 10.1016/j.cell.2021.12.027 |
0.146 |
|
| 2022 |
Petros BA, Paull JS, Tomkins-Tinch CH, Loftness BC, DeRuff KC, Nair P, Gionet GL, Benz A, Brock-Fisher T, Hughes M, Yurkovetskiy L, Mulaudzi S, Leenerman E, Nyalile T, Moreno GK, ... ... Siddle KJ, et al. Multimodal surveillance of SARS-CoV-2 at a university enables development of a robust outbreak response framework. Med (New York, N.Y.). PMID 36198312 DOI: 10.1016/j.medj.2022.09.003 |
0.142 |
|
| 2021 |
Delorey TM, Ziegler CGK, Heimberg G, Normand R, Yang Y, Segerstolpe Å, Abbondanza D, Fleming SJ, Subramanian A, Montoro DT, Jagadeesh KA, Dey KK, Sen P, Slyper M, Pita-Juárez YH, ... ... Siddle KJ, et al. COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets. Nature. PMID 33915569 DOI: 10.1038/s41586-021-03570-8 |
0.127 |
|
| 2022 |
Welch NL, Zhu M, Hua C, Weller J, Mirhashemi ME, Nguyen TG, Mantena S, Bauer MR, Shaw BM, Ackerman CM, Thakku SG, Tse MW, Kehe J, Uwera MM, Eversley JS, ... ... Siddle KJ, et al. Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants. Nature Medicine. PMID 35130561 DOI: 10.1038/s41591-022-01734-1 |
0.122 |
|
| 2021 |
Anahtar MN, Shaw BM, Slater D, Byrne EH, Botti-Lodovico Y, Adams G, Schaffner SF, Eversley J, McGrath GEG, Gogakos T, Lennerz J, Marble HD, Ritterhouse LL, Batten JM, Georgantas NZ, ... ... Siddle KJ, et al. Development of a qualitative real-time RT-PCR assay for the detection of SARS-CoV-2: a guide and case study in setting up an emergency-use, laboratory-developed molecular microbiological assay. Journal of Clinical Pathology. PMID 34049977 DOI: 10.1136/jclinpath-2020-207128 |
0.117 |
|
| 2020 |
Anahtar MN, Shaw B, Slater D, Byrne EH, Botti-Lodovico Y, Adams G, Schaffner SF, Eversley JS, McGrath G, Gogakos T, Lennerz J, Marble HD, Ritterhouse LL, Batten J, Georgantas NZ, ... ... Siddle KJ, et al. Development of a qualitative real-time RT-PCR assay for the detection of SARS-CoV-2: A guide and case study in setting up an emergency-use, laboratory-developed molecular assay. Medrxiv : the Preprint Server For Health Sciences. PMID 32909014 DOI: 10.1101/2020.08.26.20157297 |
0.113 |
|
| 2021 |
Brown CM, Vostok J, Johnson H, Burns M, Gharpure R, Sami S, Sabo RT, Hall N, Foreman A, Schubert PL, Gallagher GR, Fink T, Madoff LC, Gabriel SB, MacInnis B, ... ... Siddle KJ, et al. Outbreak of SARS-CoV-2 Infections, Including COVID-19 Vaccine Breakthrough Infections, Associated with Large Public Gatherings - Barnstable County, Massachusetts, July 2021. Mmwr. Morbidity and Mortality Weekly Report. 70: 1059-1062. PMID 34351882 DOI: 10.15585/mmwr.mm7031e2 |
0.101 |
|
| 2021 |
Normandin E, Holroyd KB, Collens SI, Shaw BM, Siddle KJ, Adams G, Rudy M, Solomon IH, Anahtar MN, Lemieux JE, Trombetta BA, Kivisakk P, Arnold SE, Rapalino O, Piantadosi AL, et al. Intrathecal inflammatory responses in the absence of SARS-CoV-2 nucleic acid in the CSF of COVID-19 hospitalized patients. Journal of the Neurological Sciences. 430: 120023. PMID 34678659 DOI: 10.1016/j.jns.2021.120023 |
0.101 |
|
| 2020 |
Gaye A, Sy M, Ndiaye T, Siddle KJ, Park DJ, Deme AB, Mbaye A, Dieye B, Ndiaye YD, Neafsey DE, Early A, Farrell T, Yade MS, Diallo MA, Diongue K, et al. Amplicon deep sequencing of kelch13 in Plasmodium falciparum isolates from Senegal. Malaria Journal. 19: 134. PMID 32228566 DOI: 10.1186/S12936-020-03193-W |
0.098 |
|
| 2021 |
Sy M, Badiane AS, Deme AB, Gaye A, Ndiaye T, Fall FB, Siddle KJ, Dieye B, Ndiaye YD, Diallo MA, Diongue K, Seck MC, Ndiaye IM, Cissé M, Gueye AB, et al. Genomic investigation of atypical malaria cases in Kanel, northern Senegal. Malaria Journal. 20: 103. PMID 33608006 DOI: 10.1186/s12936-021-03637-x |
0.096 |
|
| 2023 |
Welch NL, Zhu M, Hua C, Weller J, Mirhashemi ME, Nguyen TG, Mantena S, Bauer MR, Shaw BM, Ackerman CM, Thakku SG, Tse MW, Kehe J, Uwera MM, Eversley JS, ... ... Siddle KJ, et al. Author Correction: Multiplexed CRISPR-based microfluidic platform for clinical testing of respiratory viruses and identification of SARS-CoV-2 variants. Nature Medicine. PMID 37946059 DOI: 10.1038/s41591-023-02684-y |
0.089 |
|
| 2021 |
North CM, Barczak A, Goldstein RH, Healy BC, Finkelstein DM, Ding DD, Kim A, Boucau J, Shaw B, Gilbert RF, Vyas T, Reynolds Z, Siddle KJ, MacInnis BL, Regan J, et al. Determining the Incidence of Asymptomatic SARS-CoV-2 among Early Recipients of COVID-19 Vaccines: A Prospective Cohort Study of Healthcare Workers before, during and after Vaccination [DISCOVER-COVID-19]. Clinical Infectious Diseases : An Official Publication of the Infectious Diseases Society of America. PMID 34363462 DOI: 10.1093/cid/ciab643 |
0.082 |
|
| 2023 |
Adams G, Moreno GK, Petros BA, Uddin R, Levine Z, Kotzen B, Messer KS, Dobbins ST, DeRuff KC, Loreth CM, Brock-Fisher T, Schaffner SF, Chaluvadi S, Kanjilal S, Luban J, ... ... Siddle KJ, et al. Viral Lineages in the 2022 RSV Surge in the United States. The New England Journal of Medicine. PMID 36812457 DOI: 10.1056/NEJMc2216153 |
0.07 |
|
| 2021 |
Tomkins-Tinch CH, Daly JS, Gladden-Young A, Theodoropoulos NM, Madaio MP, Yu N, Vanguri VK, Siddle KJ, Adams G, Krasilnikova LA, Movahedi B, Bozorgzadeh A, Simin K, Lemieux JE, Luban J, et al. SARS-CoV-2 Reinfection in a Liver Transplant Recipient. Annals of Internal Medicine. PMID 33872044 DOI: 10.7326/L21-0108 |
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