Bradley Coe, Ph.D. - Publications

Affiliations: 
Genome Sciences University of Washington, Seattle, Seattle, WA 

80 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2019 Tilghman JM, Ling AY, Turner TN, Sosa MX, Krumm N, Chatterjee S, Kapoor A, Coe BP, Nguyen KH, Gupta N, Gabriel S, Eichler EE, Berrios C, Chakravarti A. Molecular Genetic Anatomy and Risk Profile of Hirschsprung's Disease. The New England Journal of Medicine. 380: 1421-1432. PMID 30970187 DOI: 10.1056/NEJMoa1706594  0.84
2019 Maggiolini FAM, Cantsilieris S, D'Addabbo P, Manganelli M, Coe BP, Dumont BL, Sanders AD, Pang AWC, Vollger MR, Palumbo O, Palumbo P, Accadia M, Carella M, Eichler EE, Antonacci F. Genomic inversions and GOLGA core duplicons underlie disease instability at the 15q25 locus. Plos Genetics. 15: e1008075. PMID 30917130 DOI: 10.1371/journal.pgen.1008075  0.84
2019 Coe BP, Stessman HAF, Sulovari A, Geisheker MR, Bakken TE, Lake AM, Dougherty JD, Lein ES, Hormozdiari F, Bernier RA, Eichler EE. Neurodevelopmental disease genes implicated by de novo mutation and copy number variation morbidity. Nature Genetics. 51: 106-116. PMID 30559488 DOI: 10.1038/s41588-018-0288-4  0.84
2018 Guo H, Wang T, Wu H, Long M, Coe BP, Li H, Xun G, Ou J, Chen B, Duan G, Bai T, Zhao N, Shen Y, Li Y, Wang Y, et al. Inherited and multiple de novo mutations in autism/developmental delay risk genes suggest a multifactorial model. Molecular Autism. 9: 64. PMID 30564305 DOI: 10.1186/s13229-018-0247-z  0.84
2018 Guo H, Duyzend MH, Coe BP, Baker C, Hoekzema K, Gerdts J, Turner TN, Zody MC, Beighley JS, Murali SC, Nelson BJ, Bamshad MJ, Nickerson DA, Bernier RA, et al. Genome sequencing identifies multiple deleterious variants in autism patients with more severe phenotypes. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 30504930 DOI: 10.1038/s41436-018-0380-2  0.84
2017 Jansen S, Hoischen A, Coe BP, Carvill GL, Van Esch H, Bosch DGM, Andersen UA, Baker C, Bauters M, Bernier RA, van Bon BW, Claahsen-van der Grinten HL, Gecz J, Gilissen C, Grillo L, et al. A genotype-first approach identifies an intellectual disability-overweight syndrome caused by PHIP haploinsufficiency. European Journal of Human Genetics : Ejhg. PMID 29209020 DOI: 10.1038/s41431-017-0039-5  0.84
2017 Wilfert AB, Sulovari A, Turner TN, Coe BP, Eichler EE. Recurrent de novo mutations in neurodevelopmental disorders: properties and clinical implications. Genome Medicine. 9: 101. PMID 29179772 DOI: 10.1186/s13073-017-0498-x  0.84
2017 Turner TN, Coe BP, Dickel DE, Hoekzema K, Nelson BJ, Zody MC, Kronenberg ZN, Hormozdiari F, Raja A, Pennacchio LA, Darnell RB, Eichler EE. Genomic Patterns of De Novo Mutation in Simplex Autism. Cell. PMID 28965761 DOI: 10.1016/j.cell.2017.08.047  0.84
2017 Geisheker MR, Heymann G, Wang T, Coe BP, Turner TN, Stessman HAF, Hoekzema K, Kvarnung M, Shaw M, Friend K, Liebelt J, Barnett C, Thompson EM, Haan E, Guo H, et al. Hotspots of missense mutation identify neurodevelopmental disorder genes and functional domains. Nature Neuroscience. PMID 28628100 DOI: 10.1038/nn.4589  0.84
2017 Kim DS, Burt AA, Ranchalis JE, Wilmot B, Smith JD, Patterson KE, Coe BP, Li YK, Bamshad MJ, Nikolas M, Eichler EE, Swanson JM, Nigg JT, Nickerson DA, Jarvik GP, et al. Sequencing of sporadic Attention-Deficit Hyperactivity Disorder (ADHD) identifies novel and potentially pathogenic de novo variants and excludes overlap with genes associated with autism spectrum disorder. American Journal of Medical Genetics. Part B, Neuropsychiatric Genetics : the Official Publication of the International Society of Psychiatric Genetics. PMID 28332277 DOI: 10.1002/ajmg.b.32527  0.84
2017 Stessman HA, Xiong B, Coe BP, Wang T, Hoekzema K, Fenckova M, Kvarnung M, Gerdts J, Trinh S, Cosemans N, Vives L, Lin J, Turner TN, Santen G, Ruivenkamp C, et al. Targeted sequencing identifies 91 neurodevelopmental-disorder risk genes with autism and developmental-disability biases. Nature Genetics. PMID 28191889 DOI: 10.1038/ng.3792  0.84
2016 Wang T, Guo H, Xiong B, Stessman HA, Wu H, Coe BP, Turner TN, Liu Y, Zhao W, Hoekzema K, Vives L, Xia L, Tang M, Ou J, Chen B, et al. De novo genic mutations among a Chinese autism spectrum disorder cohort. Nature Communications. 7: 13316. PMID 27824329 DOI: 10.1038/ncomms13316  0.84
2016 Mohajeri K, Cantsilieris S, Huddleston J, Nelson BJ, Coe BP, Campbell CD, Baker C, Harshman L, Munson KM, Kronenberg ZN, Kremitzki M, Raja A, Catacchio CR, Graves TA, Wilson RK, et al. Interchromosomal core duplicons drive both evolutionary instability and disease susceptibility of the Chromosome 8p23.1 region. Genome Research. 26: 1453-1467. PMID 27803192 DOI: 10.1101/gr.211284.116  0.84
2016 Hehir-Kwa JY, Marschall T, Kloosterman WP, Francioli LC, Baaijens JA, Dijkstra LJ, Abdellaoui A, Koval V, Thung DT, Wardenaar R, Renkens I, Coe BP, Deelen P, de Ligt J, Lameijer EW, et al. A high-quality human reference panel reveals the complexity and distribution of genomic structural variants. Nature Communications. 7: 12989. PMID 27708267 DOI: 10.1038/ncomms12989  0.84
2016 Fox K, Johnsen JM, Coe BP, Frazar CD, Reiner AP, Eichler EE, Nickerson DA. Analysis of exome sequencing data sets reveals structural variation in the coding region of ABO in individuals of African ancestry. Transfusion. PMID 27580710 DOI: 10.1111/trf.13797  0.84
2016 Mamiya PC, Richards TL, Coe BP, Eichler EE, Kuhl PK. Brain white matter structure and COMT gene are linked to second-language learning in adults. Proceedings of the National Academy of Sciences of the United States of America. PMID 27298360 DOI: 10.1073/pnas.1606602113  0.84
2016 Stessman HA, Willemsen MH, Fenckova M, Penn O, Hoischen A, Xiong B, Wang T, Hoekzema K, Vives L, Vogel I, Brunner HG, van der Burgt I, Ockeloen CW, Schuurs-Hoeijmakers JH, Klein Wassink-Ruiter JS, ... ... Coe BP, et al. Disruption of POGZ Is Associated with Intellectual Disability and Autism Spectrum Disorders. American Journal of Human Genetics. 98: 541-552. PMID 26942287 DOI: 10.1016/j.ajhg.2016.02.004  0.32
2016 Lalani SR, Liu P, Rosenfeld JA, Watkin LB, Chiang T, Leduc MS, Zhu W, Ding Y, Pan S, Vetrini F, Miyake CY, Shinawi M, Gambin T, Eldomery MK, Akdemir ZH, ... ... Coe BP, et al. Recurrent Muscle Weakness with Rhabdomyolysis, Metabolic Crises, and Cardiac Arrhythmia due to Bi-allelic TANGO2 Mutations. American Journal of Human Genetics. PMID 26805781 DOI: 10.1016/j.ajhg.2015.12.008  0.84
2015 Duyzend MH, Nuttle X, Coe BP, Baker C, Nickerson DA, Bernier R, Eichler EE. Maternal Modifiers and Parent-of-Origin Bias of the Autism-Associated 16p11.2 CNV. American Journal of Human Genetics. PMID 26749307 DOI: 10.1016/j.ajhg.2015.11.017  0.32
2015 Koolen DA, Pfundt R, Linda K, Beunders G, Veenstra-Knol HE, Conta JH, Fortuna AM, Gillessen-Kaesbach G, Dugan S, Halbach S, Abdul-Rahman OA, Winesett HM, Chung WK, Dalton M, Dimova PS, ... ... Coe BP, et al. The Koolen-de Vries syndrome: a phenotypic comparison of patients with a 17q21.31 microdeletion versus a KANSL1 sequence variant. European Journal of Human Genetics : Ejhg. PMID 26306646 DOI: 10.1038/ejhg.2015.178  0.32
2015 Sudmant PH, Mallick S, Nelson BJ, Hormozdiari F, Krumm N, Huddleston J, Coe BP, Baker C, Nordenfelt S, Bamshad M, Jorde LB, Posukh OL, Sahakyan H, Watkins WS, Yepiskoposyan L, et al. Global diversity, population stratification, and selection of human copy number variation. Science (New York, N.Y.). PMID 26249230 DOI: 10.1126/science.aab3761  0.84
2015 Krumm N, Turner TN, Baker C, Vives L, Mohajeri K, Witherspoon K, Raja A, Coe BP, Stessman HA, He ZX, Leal SM, Bernier R, Eichler EE. Excess of rare, inherited truncating mutations in autism. Nature Genetics. 47: 582-8. PMID 25961944 DOI: 10.1038/ng.3303  0.84
2015 Kloosterman WP, Francioli LC, Hormozdiari F, Marschall T, Hehir-Kwa JY, Abdellaoui A, Lameijer EW, Moed MH, Koval V, Renkens I, van Roosmalen MJ, Arp P, Karssen LC, Coe BP, Handsaker RE, et al. Characteristics of de novo structural changes in the human genome. Genome Research. 25: 792-801. PMID 25883321 DOI: 10.1101/gr.185041.114  0.84
2015 Snyder MW, Simmons LE, Kitzman JO, Coe BP, Henson JM, Daza RM, Eichler EE, Shendure J, Gammill HS. Copy-number variation and false positive prenatal aneuploidy screening results. The New England Journal of Medicine. 372: 1639-45. PMID 25830323 DOI: 10.1056/NEJMoa1408408  0.84
2015 van Bon BW, Coe BP, Bernier R, Green C, Gerdts J, Witherspoon K, Kleefstra T, Willemsen MH, Kumar R, Bosco P, Fichera M, Li D, Amaral D, Cristofoli F, Peeters H, et al. Disruptive de novo mutations of DYRK1A lead to a syndromic form of autism and ID. Molecular Psychiatry. PMID 25707398 DOI: 10.1038/mp.2015.5  0.32
2014 Coe BP, Witherspoon K, Rosenfeld JA, van Bon BW, Vulto-van Silfhout AT, Bosco P, Friend KL, Baker C, Buono S, Vissers LE, Schuurs-Hoeijmakers JH, Hoischen A, Pfundt R, Krumm N, Carvill GL, et al. Refining analyses of copy number variation identifies specific genes associated with developmental delay. Nature Genetics. 46: 1063-71. PMID 25217958 DOI: 10.1038/ng.3092  0.32
2014 Vandeweyer G, Helsmoortel C, Van Dijck A, Vulto-van Silfhout AT, Coe BP, Bernier R, Gerdts J, Rooms L, van den Ende J, Bakshi M, Wilson M, Nordgren A, Hendon LG, Abdulrahman OA, Romano C, et al. The transcriptional regulator ADNP links the BAF (SWI/SNF) complexes with autism. American Journal of Medical Genetics. Part C, Seminars in Medical Genetics. 166: 315-26. PMID 25169753 DOI: 10.1002/ajmg.c.31413  0.84
2014 Bernier R, Golzio C, Xiong B, Stessman HA, Coe BP, Penn O, Witherspoon K, Gerdts J, Baker C, Vulto-van Silfhout AT, Schuurs-Hoeijmakers JH, Fichera M, Bosco P, Buono S, Alberti A, et al. Disruptive CHD8 mutations define a subtype of autism early in development. Cell. 158: 263-76. PMID 24998929 DOI: 10.1016/j.cell.2014.06.017  0.84
2014 Jacquemont S, Coe BP, Hersch M, Duyzend MH, Krumm N, Bergmann S, Beckmann JS, Rosenfeld JA, Eichler EE. A higher mutational burden in females supports a "female protective model" in neurodevelopmental disorders. American Journal of Human Genetics. 94: 415-25. PMID 24581740 DOI: 10.1016/j.ajhg.2014.02.001  0.84
2014 Helsmoortel C, Vulto-van Silfhout AT, Coe BP, Vandeweyer G, Rooms L, van den Ende J, Schuurs-Hoeijmakers JH, Marcelis CL, Willemsen MH, Vissers LE, Yntema HG, Bakshi M, Wilson M, Witherspoon KT, Malmgren H, et al. A SWI/SNF-related autism syndrome caused by de novo mutations in ADNP. Nature Genetics. 46: 380-4. PMID 24531329 DOI: 10.1038/ng.2899  0.84
2014 Morris DW, Pearson RD, Cormican P, Kenny EM, O'Dushlaine CT, Perreault LP, Giannoulatou E, Tropea D, Maher BS, Wormley B, Kelleher E, Fahey C, Molinos I, Bellini S, Pirinen M, ... ... Coe B, et al. An inherited duplication at the gene p21 Protein-Activated Kinase 7 (PAK7) is a risk factor for psychosis. Human Molecular Genetics. 23: 3316-26. PMID 24474471 DOI: 10.1093/hmg/ddu025  0.84
2013 Rippey C, Walsh T, Gulsuner S, Brodsky M, Nord AS, Gasperini M, Pierce S, Spurrell C, Coe BP, Krumm N, Lee MK, Sebat J, McClellan JM, King MC. Formation of chimeric genes by copy-number variation as a mutational mechanism in schizophrenia. American Journal of Human Genetics. 93: 697-710. PMID 24094746 DOI: 10.1016/j.ajhg.2013.09.004  0.84
2013 Coe BP, Thu KL, Aviel-Ronen S, Vucic EA, Gazdar AF, Lam S, Tsao MS, Lam WL. Genomic deregulation of the E2F/Rb pathway leads to activation of the oncogene EZH2 in small cell lung cancer. Plos One. 8: e71670. PMID 23967231 DOI: 10.1371/journal.pone.0071670  0.84
2013 Hubaux R, Thu KL, Coe BP, MacAulay C, Lam S, Lam WL. EZH2 promotes E2F-driven SCLC tumorigenesis through modulation of apoptosis and cell-cycle regulation. Journal of Thoracic Oncology : Official Publication of the International Association For the Study of Lung Cancer. 8: 1102-6. PMID 23857401 DOI: 10.1097/JTO.0b013e318298762f  0.84
2013 Rosenfeld JA, Coe BP, Eichler EE, Cuckle H, Shaffer LG. Response to Benn. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 15: 317-8. PMID 23552452 DOI: 10.1038/gim.2013.20  0.84
2013 Girirajan S, Dennis MY, Baker C, Malig M, Coe BP, Campbell CD, Mark K, Vu TH, Alkan C, Cheng Z, Biesecker LG, Bernier R, Eichler EE. Refinement and discovery of new hotspots of copy-number variation associated with autism spectrum disorder. American Journal of Human Genetics. 92: 221-37. PMID 23375656 DOI: 10.1016/j.ajhg.2012.12.016  0.84
2013 Sapkota Y, Ghosh S, Lai R, Coe BP, Cass CE, Yasui Y, Mackey JR, Damaraju S. Germline DNA copy number aberrations identified as potential prognostic factors for breast cancer recurrence. Plos One. 8: e53850. PMID 23342018 DOI: 10.1371/journal.pone.0053850  0.84
2013 Rosenfeld JA, Coe BP, Eichler EE, Cuckle H, Shaffer LG. Estimates of penetrance for recurrent pathogenic copy-number variations. Genetics in Medicine : Official Journal of the American College of Medical Genetics. 15: 478-81. PMID 23258348 DOI: 10.1038/gim.2012.164  0.84
2012 O'Roak BJ, Vives L, Fu W, Egertson JD, Stanaway IB, Phelps IG, Carvill G, Kumar A, Lee C, Ankenman K, Munson J, Hiatt JB, Turner EH, Levy R, O'Day DR, ... ... Coe BP, et al. Multiplex targeted sequencing identifies recurrently mutated genes in autism spectrum disorders. Science (New York, N.Y.). 338: 1619-22. PMID 23160955 DOI: 10.1126/science.1227764  0.84
2012 Girirajan S, Rosenfeld JA, Coe BP, Parikh S, Friedman N, Goldstein A, Filipink RA, McConnell JS, Angle B, Meschino WS, Nezarati MM, Asamoah A, Jackson KE, Gowans GC, Martin JA, et al. Phenotypic heterogeneity of genomic disorders and rare copy-number variants. The New England Journal of Medicine. 367: 1321-31. PMID 22970919 DOI: 10.1056/NEJMoa1200395  0.84
2012 Lockwood WW, Wilson IM, Coe BP, Chari R, Pikor LA, Thu KL, Solis LM, Nunez MI, Behrens C, Yee J, English J, Murray N, Tsao MS, Minna JD, Gazdar AF, et al. Divergent genomic and epigenomic landscapes of lung cancer subtypes underscore the selection of different oncogenic pathways during tumor development. Plos One. 7: e37775. PMID 22629454 DOI: 10.1371/journal.pone.0037775  0.84
2012 Krumm N, Sudmant PH, Ko A, O'Roak BJ, Malig M, Coe BP, Quinlan AR, Nickerson DA, Eichler EE. Copy number variation detection and genotyping from exome sequence data. Genome Research. 22: 1525-32. PMID 22585873 DOI: 10.1101/gr.138115.112  0.84
2012 Coe BP, Girirajan S, Eichler EE. A genetic model for neurodevelopmental disease. Current Opinion in Neurobiology. 22: 829-36. PMID 22560351 DOI: 10.1016/j.conb.2012.04.007  0.84
2012 Coe BP, Girirajan S, Eichler EE. The genetic variability and commonality of neurodevelopmental disease. American Journal of Medical Genetics. Part C, Seminars in Medical Genetics. 160: 118-29. PMID 22499536 DOI: 10.1002/ajmg.c.31327  0.84
2012 O'Roak BJ, Vives L, Girirajan S, Karakoc E, Krumm N, Coe BP, Levy R, Ko A, Lee C, Smith JD, Turner EH, Stanaway IB, Vernot B, Malig M, Baker C, et al. Sporadic autism exomes reveal a highly interconnected protein network of de novo mutations. Nature. 485: 246-50. PMID 22495309 DOI: 10.1038/nature10989  0.84
2011 Girirajan S, Brkanac Z, Coe BP, Baker C, Vives L, Vu TH, Shafer N, Bernier R, Ferrero GB, Silengo M, Warren ST, Moreno CS, Fichera M, Romano C, Raskind WH, et al. Relative burden of large CNVs on a range of neurodevelopmental phenotypes. Plos Genetics. 7: e1002334. PMID 22102821 DOI: 10.1371/journal.pgen.1002334  0.84
2011 Cooper GM, Coe BP, Girirajan S, Rosenfeld JA, Vu TH, Baker C, Williams C, Stalker H, Hamid R, Hannig V, Abdel-Hamid H, Bader P, McCracken E, Niyazov D, Leppig K, et al. A copy number variation morbidity map of developmental delay. Nature Genetics. 43: 838-46. PMID 21841781 DOI: 10.1038/ng.909  0.84
2011 Tucker T, Montpetit A, Chai D, Chan S, Chénier S, Coe BP, Delaney A, Eydoux P, Lam WL, Langlois S, Lemyre E, Marra M, Qian H, Rouleau GA, Vincent D, et al. Comparison of genome-wide array genomic hybridization platforms for the detection of copy number variants in idiopathic mental retardation. Bmc Medical Genomics. 4: 25. PMID 21439053 DOI: 10.1186/1755-8794-4-25  0.84
2011 Alkan C, Coe BP, Eichler EE. Genome structural variation discovery and genotyping. Nature Reviews. Genetics. 12: 363-76. PMID 21358748 DOI: 10.1038/nrg2958  0.84
2010 Chari R, Lonergan KM, Pikor LA, Coe BP, Zhu CQ, Chan TH, MacAulay CE, Tsao MS, Lam S, Ng RT, Lam WL. A sequence-based approach to identify reference genes for gene expression analysis. Bmc Medical Genomics. 3: 32. PMID 20682026 DOI: 10.1186/1755-8794-3-32  0.84
2010 Lockwood WW, Chari R, Coe BP, Thu KL, Garnis C, Malloff CA, Campbell J, Williams AC, Hwang D, Zhu CQ, Buys TP, Yee J, English JC, Macaulay C, Tsao MS, et al. Integrative genomic analyses identify BRF2 as a novel lineage-specific oncogene in lung squamous cell carcinoma. Plos Medicine. 7: e1000315. PMID 20668658 DOI: 10.1371/journal.pmed.1000315  0.84
2010 Coe BP, Chari R, MacAulay C, Lam WL. FACADE: a fast and sensitive algorithm for the segmentation and calling of high resolution array CGH data. Nucleic Acids Research. 38: e157. PMID 20551132 DOI: 10.1093/nar/gkq548  0.84
2010 Chari R, Coe BP, Vucic EA, Lockwood WW, Lam WL. An integrative multi-dimensional genetic and epigenetic strategy to identify aberrant genes and pathways in cancer. Bmc Systems Biology. 4: 67. PMID 20478067 DOI: 10.1186/1752-0509-4-67  0.84
2010 Vucic EA, Thu KL, Williams AC, Lam WL, Coe BP. Copy number variations in the human genome and strategies for analysis. Methods in Molecular Biology (Clifton, N.J.). 628: 103-17. PMID 20238078 DOI: 10.1007/978-1-60327-367-1_6  0.84
2010 Lonergan KM, Chari R, Coe BP, Wilson IM, Tsao MS, Ng RT, Macaulay C, Lam S, Lam WL. Transcriptome profiles of carcinoma-in-situ and invasive non-small cell lung cancer as revealed by SAGE. Plos One. 5: e9162. PMID 20161782 DOI: 10.1371/journal.pone.0009162  0.84
2010 Chari R, Thu KL, Wilson IM, Lockwood WW, Lonergan KM, Coe BP, Malloff CA, Gazdar AF, Lam S, Garnis C, MacAulay CE, Alvarez CE, Lam WL. Integrating the multiple dimensions of genomic and epigenomic landscapes of cancer. Cancer Metastasis Reviews. 29: 73-93. PMID 20108112 DOI: 10.1007/s10555-010-9199-2  0.84
2009 Coe BP, Lockwood WW, Chari R, Lam WL. Comparative genomic hybridization on BAC arrays. Methods in Molecular Biology (Clifton, N.J.). 556: 7-19. PMID 19488868 DOI: 10.1007/978-1-60327-192-9_2  0.84
2008 Campbell JM, Lockwood WW, Buys TP, Chari R, Coe BP, Lam S, Lam WL. Integrative genomic and gene expression analysis of chromosome 7 identified novel oncogene loci in non-small cell lung cancer. Genome / National Research Council Canada = GéNome / Conseil National De Recherches Canada. 51: 1032-9. PMID 19088816 DOI: 10.1139/G08-086  0.84
2008 Chari R, Coe BP, Wedseltoft C, Benetti M, Wilson IM, Vucic EA, MacAulay C, Ng RT, Lam WL. SIGMA2: a system for the integrative genomic multi-dimensional analysis of cancer genomes, epigenomes, and transcriptomes. Bmc Bioinformatics. 9: 422. PMID 18840289 DOI: 10.1186/1471-2105-9-422  0.84
2008 Coe BP, Chari R, Lockwood WW, Lam WL. Evolving strategies for global gene expression analysis of cancer. Journal of Cellular Physiology. 217: 590-7. PMID 18680120 DOI: 10.1002/jcp.21554  0.84
2008 Aviel-Ronen S, Coe BP, Lau SK, da Cunha Santos G, Zhu CQ, Strumpf D, Jurisica I, Lam WL, Tsao MS. Genomic markers for malignant progression in pulmonary adenocarcinoma with bronchioloalveolar features. Proceedings of the National Academy of Sciences of the United States of America. 105: 10155-60. PMID 18632575 DOI: 10.1073/pnas.0709618105  0.84
2008 Chi B, deLeeuw RJ, Coe BP, Ng RT, MacAulay C, Lam WL. MD-SeeGH: a platform for integrative analysis of multi-dimensional genomic data. Bmc Bioinformatics. 9: 243. PMID 18492270 DOI: 10.1186/1471-2105-9-243  0.84
2008 Coe BP, Macaulay C, Lam WL, Ylstra B, Carvalho B, Meijer GA. Comment re: a comparison of DNA copy number profiling platforms. Cancer Research. 68: 4010; author reply 4. PMID 18483289 DOI: 10.1158/0008-5472.CAN-07-6439  0.84
2008 Lockwood WW, Chari R, Coe BP, Girard L, Macaulay C, Lam S, Gazdar AF, Minna JD, Lam WL. DNA amplification is a ubiquitous mechanism of oncogene activation in lung and other cancers. Oncogene. 27: 4615-24. PMID 18391978 DOI: 10.1038/onc.2008.98  0.84
2008 Wang JC, Coe BP, Lomax B, MacLeod PM, Parslow MI, Schein JE, Lam WL, Eydoux P. Inverted duplication with terminal deletion of 5p and no cat-like cry. American Journal of Medical Genetics. Part A. 146: 1173-9. PMID 18266247 DOI: 10.1002/ajmg.a.32246  0.84
2007 Coe BP, Ylstra B, Carvalho B, Meijer GA, Macaulay C, Lam WL. Resolving the resolution of array CGH. Genomics. 89: 647-53. PMID 17276656 DOI: 10.1016/j.ygeno.2006.12.012  0.84
2007 Lockwood WW, Coe BP, Williams AC, MacAulay C, Lam WL. Whole genome tiling path array CGH analysis of segmental copy number alterations in cervical cancer cell lines. International Journal of Cancer. Journal International Du Cancer. 120: 436-43. PMID 17096350 DOI: 10.1002/ijc.22335  0.84
2006 Chari R, Lockwood WW, Coe BP, Chu A, Macey D, Thomson A, Davies JJ, MacAulay C, Lam WL. SIGMA: a system for integrative genomic microarray analysis of cancer genomes. Bmc Genomics. 7: 324. PMID 17192189 DOI: 10.1186/1471-2164-7-324  0.84
2006 Aviel-Ronen S, Qi Zhu C, Coe BP, Liu N, Watson SK, Lam WL, Tsao MS. Large fragment Bst DNA polymerase for whole genome amplification of DNA from formalin-fixed paraffin-embedded tissues. Bmc Genomics. 7: 312. PMID 17156491 DOI: 10.1186/1471-2164-7-312  0.84
2006 Coe BP, Lockwood WW, Girard L, Chari R, Macaulay C, Lam S, Gazdar AF, Minna JD, Lam WL. Differential disruption of cell cycle pathways in small cell and non-small cell lung cancer. British Journal of Cancer. 94: 1927-35. PMID 16705311 DOI: 10.1038/sj.bjc.6603167  0.84
2006 Coe BP, Lee EH, Chi B, Girard L, Minna JD, Gazdar AF, Lam S, MacAulay C, Lam WL. Gain of a region on 7p22.3, containing MAD1L1, is the most frequent event in small-cell lung cancer cell lines. Genes, Chromosomes & Cancer. 45: 11-9. PMID 16130125 DOI: 10.1002/gcc.20260  0.84
2006 Khojasteh M, Coe B, Shah S, Ward RK, Lam WL, MacAulay C. A novel algorithm for the analysis of array CGH data Icassp, Ieee International Conference On Acoustics, Speech and Signal Processing - Proceedings. 2: II1020-II1023.  0.84
2005 Garnis C, Coe BP, Lam SL, MacAulay C, Lam WL. High-resolution array CGH increases heterogeneity tolerance in the analysis of clinical samples. Genomics. 85: 790-3. PMID 15885505 DOI: 10.1016/j.ygeno.2005.02.015  0.84
2005 Henderson LJ, Coe BP, Lee EH, Girard L, Gazdar AF, Minna JD, Lam S, MacAulay C, Lam WL. Genomic and gene expression profiling of minute alterations of chromosome arm 1p in small-cell lung carcinoma cells. British Journal of Cancer. 92: 1553-60. PMID 15785753 DOI: 10.1038/sj.bjc.6602452  0.84
2005 Coe BP, Henderson LJ, Garnis C, Tsao MS, Gazdar AF, Minna J, Lam S, Macaulay C, Lam WL. High-resolution chromosome arm 5p array CGH analysis of small cell lung carcinoma cell lines. Genes, Chromosomes & Cancer. 42: 308-13. PMID 15611929 DOI: 10.1002/gcc.20137  0.84
2004 Garnis C, Coe B, Henderson LJ, Ishkanian A, Watson S, Marra M, Minna J, Lam S, MacAulay C, Lam W. Construction and optimization of chromosome arm-specific comparative genomic hybridization arrays for identifying genetic alterations in preinvasive lung cancers. Chest. 125: 104S-5S. PMID 15136441  0.84
2004 Chi B, DeLeeuw RJ, Coe BP, MacAulay C, Lam WL. SeeGH--a software tool for visualization of whole genome array comparative genomic hybridization data. Bmc Bioinformatics. 5: 13. PMID 15040819 DOI: 10.1186/1471-2105-5-13  0.84
2004 Ishkanian AS, Malloff CA, Watson SK, DeLeeuw RJ, Chi B, Coe BP, Snijders A, Albertson DG, Pinkel D, Marra MA, Ling V, MacAulay C, Lam WL. A tiling resolution DNA microarray with complete coverage of the human genome. Nature Genetics. 36: 299-303. PMID 14981516 DOI: 10.1038/ng1307  0.84
2004 Garnis C, Coe BP, Zhang L, Rosin MP, Lam WL. Overexpression of LRP12, a gene contained within an 8q22 amplicon identified by high-resolution array CGH analysis of oral squamous cell carcinomas. Oncogene. 23: 2582-6. PMID 14676824 DOI: 10.1038/sj.onc.1207367  0.84
2004 Garnis C, Coe BP, Ishkanian A, Zhang L, Rosin MP, Lam WL. Novel regions of amplification on 8q distinct from the MYC locus and frequently altered in oral dysplasia and cancer. Genes, Chromosomes & Cancer. 39: 93-8. PMID 14603447 DOI: 10.1002/gcc.10294  0.84
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