| Year |
Citation |
Score |
| 2024 |
Du AY, Chobirko JD, Zhuo X, Feschotte C, Wang T. Regulatory transposable elements in the encyclopedia of DNA elements. Nature Communications. 15: 7594. PMID 39217141 DOI: 10.1038/s41467-024-51921-6 |
0.468 |
|
| 2024 |
Yoo D, Rhie A, Hebbar P, Antonacci F, Logsdon GA, Solar SJ, Antipov D, Pickett BD, Safonova Y, Montinaro F, Luo Y, Malukiewicz J, Storer JM, Lin J, Sequeira AN, ... ... Feschotte C, et al. Complete sequencing of ape genomes. Biorxiv : the Preprint Server For Biology. PMID 39131277 DOI: 10.1101/2024.07.31.605654 |
0.4 |
|
| 2024 |
Srivastav S, Feschotte C, Clark A. Rapid evolution of piRNA clusters in the ovary. Genome Research. PMID 38749655 DOI: 10.1101/gr.278062.123 |
0.379 |
|
| 2024 |
Chang NC, Wells JN, Wang AY, Schofield P, Huang YC, Truong VH, Simoes-Costa M, Feschotte C. Gag proteins encoded by endogenous retroviruses are required for zebrafish development. Biorxiv : the Preprint Server For Biology. PMID 38585793 DOI: 10.1101/2024.03.25.586437 |
0.344 |
|
| 2024 |
Dopkins N, Singh B, Michael S, Zhang P, Marston JL, Fei T, Singh M, Feschotte C, Collins N, Bendall ML, Nixon DF. Ribosomal profiling of human endogenous retroviruses in healthy tissues. Bmc Genomics. 25: 5. PMID 38166631 DOI: 10.1186/s12864-023-09909-x |
0.468 |
|
| 2023 |
Namasivayam S, Sun C, Bah AB, Oberstaller J, Pierre-Louis E, Etheridge RD, Feschotte C, Pritham EJ, Kissinger JC. Massive invasion of organellar DNA drives nuclear genome evolution in . Proceedings of the National Academy of Sciences of the United States of America. 120: e2308569120. PMID 37917792 DOI: 10.1073/pnas.2308569120 |
0.804 |
|
| 2023 |
Feschotte C. Transposable elements: McClintock's legacy revisited. Nature Reviews. Genetics. 24: 797-800. PMID 37723348 DOI: 10.1038/s41576-023-00652-3 |
0.353 |
|
| 2023 |
Wells JN, Chang NC, McCormick J, Coleman C, Ramos N, Jin B, Feschotte C. Transposable elements drive the evolution of metazoan zinc finger genes. Genome Research. 33: 1325-1339. PMID 37714714 DOI: 10.1101/gr.277966.123 |
0.454 |
|
| 2023 |
Namasivayam S, Sun C, Bah AB, Oberstaller J, Pierre-Louis E, Etheridge RD, Feschotte C, Pritham EJ, Kissinger JC. Massive invasion of organellar DNA drives nuclear genome evolution in . Biorxiv : the Preprint Server For Biology. PMID 37293002 DOI: 10.1101/2023.05.22.539837 |
0.803 |
|
| 2023 |
Srivastav S, Feschotte C, Clark AG. Rapid evolution of piRNA clusters in the ovary. Biorxiv : the Preprint Server For Biology. PMID 37214865 DOI: 10.1101/2023.05.08.539910 |
0.371 |
|
| 2023 |
Gozashti L, Feschotte C, Hoekstra HE. Transposable element interactions shape the ecology of the deer mouse genome. Molecular Biology and Evolution. PMID 36947073 DOI: 10.1093/molbev/msad069 |
0.48 |
|
| 2022 |
Angileri KM, Bagia NA, Feschotte C. Transposon control as a checkpoint for tissue regeneration. Development (Cambridge, England). 149. PMID 36440631 DOI: 10.1242/dev.191957 |
0.762 |
|
| 2022 |
Frank JA, Singh M, Cullen HB, Kirou RA, Benkaddour-Boumzaouad M, Cortes JL, Garcia Pérez J, Coyne CB, Feschotte C. Evolution and antiviral activity of a human protein of retroviral origin. Science (New York, N.Y.). 378: 422-428. PMID 36302021 DOI: 10.1126/science.abq7871 |
0.375 |
|
| 2022 |
Fueyo R, Judd J, Feschotte C, Wysocka J. Roles of transposable elements in the regulation of mammalian transcription. Nature Reviews. Molecular Cell Biology. PMID 35228718 DOI: 10.1038/s41580-022-00457-y |
0.442 |
|
| 2022 |
Carter T, Singh M, Dumbovic G, Chobirko JD, Rinn JL, Feschotte C. Mosaic cis-regulatory evolution drives transcriptional partitioning of HERVH endogenous retrovirus in the human embryo. Elife. 11. PMID 35179489 DOI: 10.7554/eLife.76257 |
0.319 |
|
| 2022 |
Chang NC, Rovira Q, Wells JN, Feschotte C, Vaquerizas JM. Zebrafish transposable elements show extensive diversification in age, genomic distribution, and developmental expression. Genome Research. PMID 34987056 DOI: 10.1101/gr.275655.121 |
0.451 |
|
| 2021 |
Cosby RL, Judd J, Zhang R, Zhong A, Garry N, Pritham EJ, Feschotte C. Recurrent evolution of vertebrate transcription factors by transposase capture. Science (New York, N.Y.). 371. PMID 33602827 DOI: 10.1126/science.abc6405 |
0.798 |
|
| 2020 |
Wells JN, Feschotte C. A Field Guide to Eukaryotic Transposable Elements. Annual Review of Genetics. PMID 32955944 DOI: 10.1146/annurev-genet-040620-022145 |
0.485 |
|
| 2020 |
Goubert C, Zevallos NA, Feschotte C. Correction to 'Contribution of unfixed transposable element insertions to human regulatory variation'. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20200084. PMID 32951558 DOI: 10.1098/Rstb.2020.0084 |
0.374 |
|
| 2020 |
Flynn JM, Hubley R, Goubert C, Rosen J, Clark AG, Feschotte C, Smit AF. RepeatModeler2 for automated genomic discovery of transposable element families. Proceedings of the National Academy of Sciences of the United States of America. PMID 32300014 DOI: 10.1073/Pnas.1921046117 |
0.543 |
|
| 2020 |
Goubert C, Zevallos NA, Feschotte C. Contribution of unfixed transposable element insertions to human regulatory variation. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 375: 20190331. PMID 32075552 DOI: 10.1098/Rstb.2019.0331 |
0.449 |
|
| 2020 |
Goubert C, Thomas J, Payer LM, Kidd JM, Feusier J, Watkins WS, Burns KH, Jorde LB, Feschotte C. TypeTE: a tool to genotype mobile element insertions from whole genome resequencing data. Nucleic Acids Research. PMID 32067044 DOI: 10.1093/Nar/Gkaa074 |
0.492 |
|
| 2020 |
Erlendsson S, Morado DR, Cullen HB, Feschotte C, Shepherd JD, Briggs JAG. Structures of virus-like capsids formed by the Drosophila neuronal Arc proteins. Nature Neuroscience. PMID 31907439 DOI: 10.2210/Pdb6Taq/Pdb |
0.307 |
|
| 2019 |
Cosby RL, Chang NC, Feschotte C. Host-transposon interactions: conflict, cooperation, and cooption. Genes & Development. 33: 1098-1116. PMID 31481535 DOI: 10.1101/Gad.327312.119 |
0.849 |
|
| 2019 |
Zhao X, Xiong J, Mao F, Sheng Y, Chen X, Feng L, Dui W, Yang W, Kapusta A, Feschotte C, Coyne RS, Miao W, Gao S, Liu Y. RNAi-dependent repression controls transposable elements in . Genes & Development. PMID 30808657 DOI: 10.1101/Gad.320796.118 |
0.739 |
|
| 2018 |
Thomas J, Perron H, Feschotte C. Variation in proviral content among human genomes mediated by LTR recombination. Mobile Dna. 9: 36. PMID 30568734 DOI: 10.1186/S13100-018-0142-3 |
0.524 |
|
| 2018 |
Raviram R, Rocha PP, Luo VM, Swanzey E, Miraldi ER, Chuong EB, Feschotte C, Bonneau R, Skok JA. Analysis of 3D genomic interactions identifies candidate host genes that transposable elements potentially regulate. Genome Biology. 19: 216. PMID 30541598 DOI: 10.1186/S13059-018-1598-7 |
0.795 |
|
| 2018 |
Bourque G, Burns KH, Gehring M, Gorbunova V, Seluanov A, Hammell M, Imbeault M, Izsvák Z, Levin HL, Macfarlan TS, Mager DL, Feschotte C. Ten things you should know about transposable elements. Genome Biology. 19: 199. PMID 30454069 DOI: 10.1186/S13059-018-1577-Z |
0.513 |
|
| 2018 |
Judd J, Feschotte C. Transposons take remote control. Elife. 7. PMID 30256192 DOI: 10.7554/Elife.40921 |
0.486 |
|
| 2018 |
Gilbert C, Feschotte C. Horizontal acquisition of transposable elements and viral sequences: patterns and consequences. Current Opinion in Genetics & Development. 49: 15-24. PMID 29505963 DOI: 10.1016/J.Gde.2018.02.007 |
0.744 |
|
| 2018 |
Pastuzyn ED, Day CE, Kearns RB, Kyrke-Smith M, Taibi AV, McCormick J, Yoder N, Belnap DM, Erlendsson S, Morado DR, Briggs JAG, Feschotte C, Shepherd JD. The Neuronal Gene Arc Encodes a Repurposed Retrotransposon Gag Protein that Mediates Intercellular RNA Transfer. Cell. 172: 275-288.e18. PMID 29328916 DOI: 10.1016/J.Cell.2017.12.024 |
0.3 |
|
| 2017 |
Jangam D, Feschotte C, Betrán E. Transposable Element Domestication As an Adaptation to Evolutionary Conflicts. Trends in Genetics : Tig. PMID 28844698 DOI: 10.1016/J.Tig.2017.07.011 |
0.447 |
|
| 2017 |
Adema CM, Hillier LW, Jones CS, Loker ES, Knight M, Minx P, Oliveira G, Raghavan N, Shedlock A, do Amaral LR, Arican-Goktas HD, Assis JG, Baba EH, Baron OL, Bayne CJ, ... ... Feschotte C, et al. Corrigendum: Whole genome analysis of a schistosomiasis-transmitting freshwater snail. Nature Communications. 8: 16153. PMID 28832025 DOI: 10.1038/Ncomms16153 |
0.77 |
|
| 2017 |
Frank JA, Feschotte C. Co-option of endogenous viral sequences for host cell function. Current Opinion in Virology. 25: 81-89. PMID 28818736 DOI: 10.1016/J.Coviro.2017.07.021 |
0.45 |
|
| 2017 |
Adema CM, Hillier LW, Jones CS, Loker ES, Knight M, Minx P, Oliveira G, Raghavan N, Shedlock A, do Amaral LR, Arican-Goktas HD, Assis JG, Baba EH, Baron OL, Bayne CJ, ... ... Feschotte C, et al. Whole genome analysis of a schistosomiasis-transmitting freshwater snail. Nature Communications. 8: 15451. PMID 28508897 DOI: 10.1038/Ncomms15451 |
0.76 |
|
| 2017 |
Venner S, Miele V, Terzian C, Biémont C, Daubin V, Feschotte C, Pontier D. Ecological networks to unravel the routes to horizontal transposon transfers. Plos Biology. 15: e2001536. PMID 28199335 DOI: 10.1371/Journal.Pbio.2001536 |
0.44 |
|
| 2017 |
Kapusta A, Suh A, Feschotte C. Dynamics of genome size evolution in birds and mammals. Proceedings of the National Academy of Sciences of the United States of America. PMID 28179571 DOI: 10.1073/Pnas.1616702114 |
0.808 |
|
| 2016 |
Gilbert C, Feschotte C. Endogenous viral elements: evolution and impact. Virologie (Montrouge, France). 20: 158-173. PMID 33065895 DOI: 10.1684/Vir.2016.0652 |
0.73 |
|
| 2016 |
Hamilton EP, Kapusta A, Huvos PE, Bidwell SL, Zafar N, Tang H, Hadjithomas M, Krishnakumar V, Badger JH, Caler EV, Russ C, Zeng Q, Fan L, Levin JZ, Shea T, ... ... Feschotte C, et al. Structure of the germline genome of Tetrahymenathermophila and relationship to the massively rearranged somatic genome. Elife. 5. PMID 27892853 DOI: 10.7554/Elife.19090 |
0.85 |
|
| 2016 |
Chuong EB, Elde NC, Feschotte C. Regulatory activities of transposable elements: from conflicts to benefits. Nature Reviews. Genetics. PMID 27867194 DOI: 10.1038/Nrg.2016.139 |
0.827 |
|
| 2016 |
Rius N, Guillén Y, Delprat A, Kapusta A, Feschotte C, Ruiz A. Exploration of the Drosophila buzzatii transposable element content suggests underestimation of repeats in Drosophila genomes. Bmc Genomics. 17: 344. PMID 27164953 DOI: 10.1186/S12864-016-2648-8 |
0.809 |
|
| 2016 |
Chuong EB, Elde NC, Feschotte C. Regulatory evolution of innate immunity through co-option of endogenous retroviruses. Science (New York, N.Y.). 351: 1083-7. PMID 26941318 DOI: 10.1126/Science.Aad5497 |
0.827 |
|
| 2016 |
Hamilton EP, Kapusta A, Huvos PE, Bidwell SL, Zafar N, Tang H, Hadjithomas M, Krishnakumar V, Badger JH, Caler EV, Russ C, Zeng Q, Fan L, Levin JZ, Shea T, ... ... Feschotte C, et al. Author response: Structure of the germline genome of Tetrahymena thermophila and relationship to the massively rearranged somatic genome Elife. DOI: 10.7554/Elife.19090.045 |
0.787 |
|
| 2015 |
Zhuo X, Feschotte C. Cross-Species Transmission and Differential Fate of an Endogenous Retrovirus in Three Mammal Lineages. Plos Pathogens. 11: e1005279. PMID 26562410 DOI: 10.1371/Journal.Ppat.1005279 |
0.785 |
|
| 2015 |
Henssen AG, Henaff E, Jiang E, Eisenberg AR, Carson JR, Villasante CM, Ray M, Still E, Burns M, Gandara J, Feschotte C, Mason CE, Kentsis A. Genomic DNA transposition induced by human PGBD5. Elife. 4. PMID 26406119 DOI: 10.7554/Elife.10565 |
0.554 |
|
| 2015 |
Hoen DR, Hickey G, Bourque G, Casacuberta J, Cordaux R, Feschotte C, Fiston-Lavier AS, Hua-Van A, Hubley R, Kapusta A, Lerat E, Maumus F, Pollock DD, Quesneville H, Smit A, et al. A call for benchmarking transposable element annotation methods. Mobile Dna. 6: 13. PMID 26244060 DOI: 10.1186/S13100-015-0044-6 |
0.811 |
|
| 2015 |
Sun C, Feschotte C, Wu Z, Mueller RL. DNA transposons have colonized the genome of the giant virus Pandoravirus salinus. Bmc Biology. 13: 38. PMID 26067596 DOI: 10.1186/S12915-015-0145-1 |
0.595 |
|
| 2015 |
Malfavon-Borja R, Feschotte C. Fighting fire with fire: endogenous retrovirus envelopes as restriction factors. Journal of Virology. 89: 4047-50. PMID 25653437 DOI: 10.1128/Jvi.03653-14 |
0.828 |
|
| 2015 |
Lynch VJ, Nnamani MC, Kapusta A, Brayer K, Plaza SL, Mazur EC, Emera D, Sheikh SZ, Grützner F, Bauersachs S, Graf A, Young SL, Lieb JD, DeMayo FJ, Feschotte C, et al. Ancient transposable elements transformed the uterine regulatory landscape and transcriptome during the evolution of mammalian pregnancy. Cell Reports. 10: 551-61. PMID 25640180 DOI: 10.1016/J.Celrep.2014.12.052 |
0.769 |
|
| 2015 |
Guillén Y, Rius N, Delprat A, Williford A, Muyas F, Puig M, Casillas S, Ràmia M, Egea R, Negre B, Mir G, Camps J, Moncunill V, Ruiz-Ruano FJ, Cabrero J, ... ... Feschotte C, et al. Genomics of ecological adaptation in cactophilic Drosophila. Genome Biology and Evolution. 7: 349-66. PMID 25552534 DOI: 10.1093/Gbe/Evu291 |
0.778 |
|
| 2015 |
Henssen AG, Henaff E, Jiang E, Eisenberg AR, Carson JR, Villasante CM, Ray M, Still E, Burns M, Gandara J, Feschotte C, Mason CE, Kentsis A. Author response: Genomic DNA transposition induced by human PGBD5 Elife. DOI: 10.7554/Elife.10565.027 |
0.46 |
|
| 2015 |
Zhuo X, Feschotte C. Cross-Species Transmission and Differential Fate of an Endogenous Retrovirus in Three Mammal Lineages Plos Pathogens. 11. DOI: 10.1371/journal.ppat.1005279 |
0.772 |
|
| 2015 |
Hoen DR, Hickey G, Bourque G, Casacuberta J, Cordaux R, Feschotte C, Fiston-Lavier AS, Hua-Van A, Hubley R, Kapusta A, Lerat E, Maumus F, Pollock DD, Quesneville H, Smit A, et al. A call for benchmarking transposable element annotation methods Mobile Dna. 6. DOI: 10.1186/s13100-015-0044-6 |
0.79 |
|
| 2015 |
Henssen A, Eisenberg A, Jiang E, Henaff E, Koche R, Burns M, Carson JR, Nanjangud G, Still E, Gandara J, Cifani P, Dhabaria A, Huang X, Stanchina Ed, Mullen E, ... ... Feschotte C, et al. Abstract 1103: Human tumorigenesis induced by endogenous DNA transposase Cancer Research. 75: 1103-1103. DOI: 10.1158/1538-7445.Am2015-1103 |
0.495 |
|
| 2014 |
Singh PK, Bourque G, Craig NL, Dubnau JT, Feschotte C, Flasch DA, Gunderson KL, Malik HS, Moran JV, Peters JE, Slotkin RK, Levin HL. Mobile genetic elements and genome evolution 2014. Mobile Dna. 5: 26. PMID 30117500 DOI: 10.1186/1759-8753-5-26 |
0.701 |
|
| 2014 |
Kapusta A, Feschotte C. Volatile evolution of long noncoding RNA repertoires: mechanisms and biological implications. Trends in Genetics : Tig. 30: 439-52. PMID 25218058 DOI: 10.1016/J.Tig.2014.08.004 |
0.78 |
|
| 2014 |
Ha H, Song J, Wang S, Kapusta A, Feschotte C, Chen KC, Xing J. A comprehensive analysis of piRNAs from adult human testis and their relationship with genes and mobile elements. Bmc Genomics. 15: 545. PMID 24981367 DOI: 10.1186/1471-2164-15-545 |
0.738 |
|
| 2014 |
Han MJ, Xu HE, Zhang HH, Feschotte C, Zhang Z. Spy: a new group of eukaryotic DNA transposons without target site duplications. Genome Biology and Evolution. 6: 1748-57. PMID 24966181 DOI: 10.1093/Gbe/Evu140 |
0.506 |
|
| 2014 |
Zhang HH, Feschotte C, Han MJ, Zhang Z. Recurrent horizontal transfers of Chapaev transposons in diverse invertebrate and vertebrate animals. Genome Biology and Evolution. 6: 1375-86. PMID 24868016 DOI: 10.1093/Gbe/Evu112 |
0.475 |
|
| 2014 |
Campos-Sánchez R, Kapusta A, Feschotte C, Chiaromonte F, Makova KD. Genomic landscape of human, bat, and ex vivo DNA transposon integrations. Molecular Biology and Evolution. 31: 1816-32. PMID 24809961 DOI: 10.1093/Molbev/Msu138 |
0.805 |
|
| 2014 |
Singh PK, Bourque G, Craig NL, Dubnau JT, Feschotte C, Flasch DA, Gunderson KL, Malik HS, Moran JV, Peters JE, Slotkin RK, Levin HL. Mobile genetic elements and genome evolution 2014 Mobile Dna. 5. DOI: 10.1186/1759-8753-5-26 |
0.643 |
|
| 2014 |
Castoe TA, De Koning APJ, Hall KT, Card DC, Schield DR, Fujita MK, Ruggiero RP, Degner JF, Daza JM, Gu W, Reyes-Velasco J, Shaney KJ, Castoe JM, Fox SE, Poole AW, ... ... Feschotte C, et al. The Burmese python genome reveals the molecular basis for extreme adaptation in snakes (Proceedings of the National Academy of Sciences of the United States of America (2013) 110, 51, (20645-20650) DOI: 10.1073/pnas. 1314475110) Proceedings of the National Academy of Sciences of the United States of America. 111: 3194. DOI: 10.1073/Pnas.1324133111 |
0.748 |
|
| 2013 |
Castoe TA, de Koning AP, Hall KT, Card DC, Schield DR, Fujita MK, Ruggiero RP, Degner JF, Daza JM, Gu W, Reyes-Velasco J, Shaney KJ, Castoe JM, Fox SE, Poole AW, ... ... Feschotte C, et al. The Burmese python genome reveals the molecular basis for extreme adaptation in snakes. Proceedings of the National Academy of Sciences of the United States of America. 110: 20645-50. PMID 24297902 DOI: 10.1073/Pnas.1314475110 |
0.79 |
|
| 2013 |
Chuong EB, Feschotte C. Evolution. Transposons up the dosage. Science (New York, N.Y.). 342: 812-3. PMID 24233714 DOI: 10.1126/Science.1246659 |
0.75 |
|
| 2013 |
Zhuo X, Rho M, Feschotte C. Genome-wide characterization of endogenous retroviruses in the bat Myotis lucifugus reveals recent and diverse infections. Journal of Virology. 87: 8493-501. PMID 23720713 DOI: 10.1128/Jvi.00892-13 |
0.819 |
|
| 2013 |
Kapusta A, Kronenberg Z, Lynch VJ, Zhuo X, Ramsay L, Bourque G, Yandell M, Feschotte C. Transposable elements are major contributors to the origin, diversification, and regulation of vertebrate long noncoding RNAs. Plos Genetics. 9: e1003470. PMID 23637635 DOI: 10.1371/Journal.Pgen.1003470 |
0.823 |
|
| 2013 |
Gilbert C, Waters P, Feschotte C, Schaack S. Horizontal transfer of OC1 transposons in the Tasmanian devil. Bmc Genomics. 14: 134. PMID 23445260 DOI: 10.1186/1471-2164-14-134 |
0.828 |
|
| 2013 |
Mitra R, Li X, Kapusta A, Mayhew D, Mitra RD, Feschotte C, Craig NL. Functional characterization of piggyBat from the bat Myotis lucifugus unveils an active mammalian DNA transposon. Proceedings of the National Academy of Sciences of the United States of America. 110: 234-9. PMID 23248290 DOI: 10.1073/Pnas.1217548110 |
0.827 |
|
| 2013 |
Li X, Ewis H, Hice RH, Malani N, Parker N, Zhou L, Feschotte C, Bushman FD, Atkinson PW, Craig NL. A resurrected mammalian hAT transposable element and a closely related insect element are highly active in human cell culture. Proceedings of the National Academy of Sciences of the United States of America. 110: E478-87. PMID 23091042 DOI: 10.1073/Pnas.1121543109 |
0.48 |
|
| 2012 |
Arkhipova IR, Batzer MA, Brosius J, Feschotte C, Moran JV, Schmitz J, Jurka J. Genomic impact of eukaryotic transposable elements. Mobile Dna. 3: 19. PMID 23171443 DOI: 10.1186/1759-8753-3-19 |
0.487 |
|
| 2012 |
Feschotte C, Gilbert C. Endogenous viruses: insights into viral evolution and impact on host biology. Nature Reviews. Genetics. 13: 283-96. PMID 22421730 DOI: 10.1038/Nrg3199 |
0.717 |
|
| 2012 |
Sun C, Shepard DB, Chong RA, López Arriaza J, Hall K, Castoe TA, Feschotte C, Pollock DD, Mueller RL. LTR retrotransposons contribute to genomic gigantism in plethodontid salamanders. Genome Biology and Evolution. 4: 168-83. PMID 22200636 DOI: 10.1093/Gbe/Evr139 |
0.56 |
|
| 2012 |
Gilbert C, Hernandez SS, Flores-Benabib J, Smith EN, Feschotte C. Rampant horizontal transfer of SPIN transposons in squamate reptiles. Molecular Biology and Evolution. 29: 503-15. PMID 21771716 DOI: 10.1093/Molbev/Msr181 |
0.709 |
|
| 2012 |
Kejnovsky E, Hawkins JS, Feschotte C. Plant transposable elements: Biology and evolution Plant Genome Diversity. 1: 17-34. DOI: 10.1007/978-3-7091-1130-7_2 |
0.308 |
|
| 2011 |
Castoe TA, de Koning JA, Hall KT, Yokoyama KD, Gu W, Smith EN, Feschotte C, Uetz P, Ray DA, Dobry J, Bogden R, Mackessy SP, Bronikowski AM, Warren WC, Secor SM, et al. Sequencing the genome of the Burmese python (Python molurus bivittatus) as a model for studying extreme adaptations in snakes. Genome Biology. 12: 406. PMID 21801464 DOI: 10.1186/Gb-2011-12-7-406 |
0.522 |
|
| 2011 |
Castoe TA, Hall KT, Guibotsy Mboulas ML, Gu W, de Koning AP, Fox SE, Poole AW, Vemulapalli V, Daza JM, Mockler T, Smith EN, Feschotte C, Pollock DD. Discovery of highly divergent repeat landscapes in snake genomes using high-throughput sequencing. Genome Biology and Evolution. 3: 641-53. PMID 21572095 DOI: 10.1093/Gbe/Evr043 |
0.589 |
|
| 2010 |
Gilbert C, Schaack S, Feschotte C. [Mobile elements jump between parasites and vertebrate hosts]. Mã©Decine Sciences : M/S. 26: 1025-7. PMID 21187035 DOI: 10.1051/Medsci/201026121025 |
0.74 |
|
| 2010 |
Arensburger P, Megy K, Waterhouse RM, Abrudan J, Amedeo P, Antelo B, Bartholomay L, Bidwell S, Caler E, Camara F, Campbell CL, Campbell KS, Casola C, Castro MT, Chandramouliswaran I, ... ... Feschotte C, et al. Sequencing of Culex quinquefasciatus establishes a platform for mosquito comparative genomics. Science (New York, N.Y.). 330: 86-8. PMID 20929810 DOI: 10.1126/Science.1191864 |
0.82 |
|
| 2010 |
Gilbert C, Feschotte C. Genomic fossils calibrate the long-term evolution of hepadnaviruses. Plos Biology. 8. PMID 20927357 DOI: 10.1371/Journal.Pbio.1000495 |
0.727 |
|
| 2010 |
Chaconas G, Craig N, Curcio MJ, Deininger P, Feschotte C, Levin H, Rice PA, Voytas DF. Meeting report for mobile DNA 2010. Mobile Dna. 1: 20. PMID 20735816 DOI: 10.1186/1759-8753-1-20 |
0.367 |
|
| 2010 |
Schaack S, Gilbert C, Feschotte C. Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution. Trends in Ecology & Evolution. 25: 537-46. PMID 20591532 DOI: 10.1016/J.Tree.2010.06.001 |
0.828 |
|
| 2010 |
Gilbert C, Schaack S, Pace JK, Brindley PJ, Feschotte C. A role for host-parasite interactions in the horizontal transfer of transposons across phyla. Nature. 464: 1347-50. PMID 20428170 DOI: 10.1038/Nature08939 |
0.817 |
|
| 2010 |
Singh A, Keswani U, Levine D, Feschotte C. An algorithm for the reconstruction of consensus sequences of ancient segmental duplications and transposon copies in eukaryotic genomes. International Journal of Bioinformatics Research and Applications. 6: 147-62. PMID 20223737 DOI: 10.1504/Ijbra.2010.032118 |
0.545 |
|
| 2010 |
Feschotte C. Virology: Bornavirus enters the genome. Nature. 463: 39-40. PMID 20054386 DOI: 10.1038/463039A |
0.49 |
|
| 2009 |
Feschotte C, Keswani U, Ranganathan N, Guibotsy ML, Levine D. Exploring repetitive DNA landscapes using REPCLASS, a tool that automates the classification of transposable elements in eukaryotic genomes. Genome Biology and Evolution. 1: 205-20. PMID 20333191 DOI: 10.1093/Gbe/Evp023 |
0.582 |
|
| 2009 |
Feschotte C, Pritham EJ. A cornucopia of Helitrons shapes the maize genome. Proceedings of the National Academy of Sciences of the United States of America. 106: 19747-8. PMID 19926864 DOI: 10.1073/Pnas.0910273106 |
0.806 |
|
| 2009 |
Yang G, Nagel DH, Feschotte C, Hancock CN, Wessler SR. Tuned for transposition: molecular determinants underlying the hyperactivity of a Stowaway MITE. Science (New York, N.Y.). 325: 1391-4. PMID 19745152 DOI: 10.1126/Science.1175688 |
0.801 |
|
| 2009 |
Gilbert C, Pace JK, Feschotte C. Horizontal SPINning of transposons. Communicative & Integrative Biology. 2: 117-9. PMID 19704906 DOI: 10.4161/Cib.7720 |
0.79 |
|
| 2009 |
Venner S, Feschotte C, Biémont C. Dynamics of transposable elements: towards a community ecology of the genome. Trends in Genetics : Tig. 25: 317-23. PMID 19540613 DOI: 10.1016/J.Tig.2009.05.003 |
0.423 |
|
| 2009 |
Pace JK, Sen SK, Batzer MA, Feschotte C. Repair-mediated duplication by capture of proximal chromosomal DNA has shaped vertebrate genome evolution. Plos Genetics. 5: e1000469. PMID 19424419 DOI: 10.1371/Journal.Pgen.1000469 |
0.85 |
|
| 2009 |
Gilbert C, Maxfield DG, Goodman SM, Feschotte C. Parallel germline infiltration of a lentivirus in two Malagasy lemurs. Plos Genetics. 5: e1000425. PMID 19300488 DOI: 10.1371/Journal.Pgen.1000425 |
0.686 |
|
| 2008 |
Pace JK, Gilbert C, Clark MS, Feschotte C. Repeated horizontal transfer of a DNA transposon in mammals and other tetrapods. Proceedings of the National Academy of Sciences of the United States of America. 105: 17023-8. PMID 18936483 DOI: 10.1073/Pnas.0806548105 |
0.83 |
|
| 2008 |
Feschotte C. Transposable elements and the evolution of regulatory networks. Nature Reviews. Genetics. 9: 397-405. PMID 18368054 DOI: 10.1038/Nrg2337 |
0.414 |
|
| 2008 |
Ray DA, Feschotte C, Pagan HJ, Smith JD, Pritham EJ, Arensburger P, Atkinson PW, Craig NL. Multiple waves of recent DNA transposon activity in the bat, Myotis lucifugus. Genome Research. 18: 717-28. PMID 18340040 DOI: 10.1101/Gr.071886.107 |
0.818 |
|
| 2008 |
Casola C, Hucks D, Feschotte C. Convergent domestication of pogo-like transposases into centromere-binding proteins in fission yeast and mammals. Molecular Biology and Evolution. 25: 29-41. PMID 17940212 DOI: 10.1093/Molbev/Msm221 |
0.751 |
|
| 2007 |
Feschotte C, Pritham EJ. DNA transposons and the evolution of eukaryotic genomes. Annual Review of Genetics. 41: 331-68. PMID 18076328 DOI: 10.1146/annurev.genet.40.110405.090448 |
0.807 |
|
| 2007 |
Singh A, Feschotte C, Stojanovic N. A study of the repetitive structure and distribution of short motifs in human genomic sequences. International Journal of Bioinformatics Research and Applications. 3: 523-35. PMID 18048317 DOI: 10.1504/Ijbra.2007.015419 |
0.538 |
|
| 2007 |
Lin R, Ding L, Casola C, Ripoll DR, Feschotte C, Wang H. Transposase-derived transcription factors regulate light signaling in Arabidopsis. Science (New York, N.Y.). 318: 1302-5. PMID 18033885 DOI: 10.1126/Science.1146281 |
0.681 |
|
| 2007 |
Casola C, Lawing AM, Betrán E, Feschotte C. PIF-like transposons are common in drosophila and have been repeatedly domesticated to generate new host genes. Molecular Biology and Evolution. 24: 1872-88. PMID 17556756 DOI: 10.1093/Molbev/Msm116 |
0.763 |
|
| 2007 |
Pace JK, Feschotte C. The evolutionary history of human DNA transposons: evidence for intense activity in the primate lineage. Genome Research. 17: 422-32. PMID 17339369 DOI: 10.1101/Gr.5826307 |
0.823 |
|
| 2007 |
Pritham EJ, Feschotte C. Massive amplification of rolling-circle transposons in the lineage of the bat Myotis lucifugus. Proceedings of the National Academy of Sciences of the United States of America. 104: 1895-900. PMID 17261799 DOI: 10.1073/Pnas.0609601104 |
0.804 |
|
| 2007 |
Bai Y, Casola C, Feschotte C, Betrán E. Comparative genomics reveals a constant rate of origination and convergent acquisition of functional retrogenes in Drosophila. Genome Biology. 8: R11. PMID 17233920 DOI: 10.1186/Gb-2007-8-1-R11 |
0.765 |
|
| 2007 |
Pritham EJ, Putliwala T, Feschotte C. Mavericks, a novel class of giant transposable elements widespread in eukaryotes and related to DNA viruses. Gene. 390: 3-17. PMID 17034960 DOI: 10.1016/J.Gene.2006.08.008 |
0.801 |
|
| 2006 |
Feschotte C. The piggyBac transposon holds promise for human gene therapy. Proceedings of the National Academy of Sciences of the United States of America. 103: 14981-2. PMID 17015820 DOI: 10.1073/Pnas.0607282103 |
0.418 |
|
| 2006 |
Feschotte C, Pritham EJ. Mobile DNA: genomes under the influence. Genome Biology. 7: 320. PMID 16817946 DOI: 10.1186/Gb-2006-7-6-320 |
0.751 |
|
| 2006 |
Cordaux R, Udit S, Batzer MA, Feschotte C. Birth of a chimeric primate gene by capture of the transposase gene from a mobile element. Proceedings of the National Academy of Sciences of the United States of America. 103: 8101-6. PMID 16672366 DOI: 10.1073/Pnas.0601161103 |
0.451 |
|
| 2005 |
Feschotte C, Pritham EJ. Non-mammalian c-integrases are encoded by giant transposable elements. Trends in Genetics : Tig. 21: 551-2. PMID 16084623 DOI: 10.1016/J.Tig.2005.07.007 |
0.753 |
|
| 2005 |
Pritham EJ, Feschotte C, Wessler SR. Unexpected diversity and differential success of DNA transposons in four species of entamoeba protozoans. Molecular Biology and Evolution. 22: 1751-63. PMID 15901838 DOI: 10.1093/Molbev/Msi169 |
0.825 |
|
| 2005 |
Feschotte C, Osterlund MT, Peeler R, Wessler SR. DNA-binding specificity of rice mariner-like transposases and interactions with Stowaway MITEs. Nucleic Acids Research. 33: 2153-65. PMID 15831788 DOI: 10.1093/Nar/Gki509 |
0.835 |
|
| 2004 |
Feschotte C. Merlin, a new superfamily of DNA transposons identified in diverse animal genomes and related to bacterial IS1016 insertion sequences. Molecular Biology and Evolution. 21: 1769-80. PMID 15190130 DOI: 10.1093/Molbev/Msh188 |
0.532 |
|
| 2004 |
Zhang X, Jiang N, Feschotte C, Wessler SR. PIF- and Pong-like transposable elements: distribution, evolution and relationship with Tourist-like miniature inverted-repeat transposable elements. Genetics. 166: 971-86. PMID 15020481 DOI: 10.1534/Genetics.166.2.971 |
0.762 |
|
| 2004 |
Jiang N, Feschotte C, Zhang X, Wessler SR. Using rice to understand the origin and amplification of miniature inverted repeat transposable elements (MITEs). Current Opinion in Plant Biology. 7: 115-9. PMID 15003209 DOI: 10.1016/J.Pbi.2004.01.004 |
0.74 |
|
| 2003 |
Pritham EJ, Zhang YH, Feschotte C, Kesseli RV. An Ac-like transposable element family with transcriptionally active Y-linked copies in the white campion, Silene latifolia. Genetics. 165: 799-807. PMID 14573489 |
0.774 |
|
| 2003 |
Feschotte C, Swamy L, Wessler SR. Genome-wide analysis of mariner-like transposable elements in rice reveals complex relationships with stowaway miniature inverted repeat transposable elements (MITEs). Genetics. 163: 747-58. PMID 12618411 |
0.66 |
|
| 2002 |
Feschotte C, Jiang N, Wessler SR. Plant transposable elements: where genetics meets genomics. Nature Reviews. Genetics. 3: 329-41. PMID 11988759 DOI: 10.1038/Nrg793 |
0.734 |
|
| 2002 |
Feschotte C, Wessler SR. Mariner-like transposases are widespread and diverse in flowering plants. Proceedings of the National Academy of Sciences of the United States of America. 99: 280-5. PMID 11756687 DOI: 10.1073/Pnas.022626699 |
0.621 |
|
| 2001 |
Zhang X, Feschotte C, Zhang Q, Jiang N, Eggleston WB, Wessler SR. P instability factor: an active maize transposon system associated with the amplification of Tourist-like MITEs and a new superfamily of transposases. Proceedings of the National Academy of Sciences of the United States of America. 98: 12572-7. PMID 11675493 DOI: 10.1073/Pnas.211442198 |
0.754 |
|
| 2001 |
Feschotte C, Wessler SR. Treasures in the attic: rolling circle transposons discovered in eukaryotic genomes. Proceedings of the National Academy of Sciences of the United States of America. 98: 8923-4. PMID 11481459 DOI: 10.1073/Pnas.171326198 |
0.73 |
|
| 2001 |
Feschotte C, Fourrier N, Desmons I, Mouchès C. Birth of a retroposon: the Twin SINE family from the vector mosquito Culex pipiens may have originated from a dimeric tRNA precursor. Molecular Biology and Evolution. 18: 74-84. PMID 11141194 DOI: 10.1093/Oxfordjournals.Molbev.A003721 |
0.796 |
|
| 2000 |
Feschotte C, Mouchès C. Recent amplification of miniature inverted-repeat transposable elements in the vector mosquito Culex pipiens: characterization of the Mimo family. Gene. 250: 109-16. PMID 10854784 DOI: 10.1016/S0378-1119(00)00187-6 |
0.827 |
|
| 2000 |
Feschotte C, Mouchès C. Evidence that a family of miniature inverted-repeat transposable elements (MITEs) from the Arabidopsis thaliana genome has arisen from a pogo-like DNA transposon. Molecular Biology and Evolution. 17: 730-7. PMID 10779533 DOI: 10.1093/Oxfordjournals.Molbev.A026351 |
0.797 |
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