| Year |
Citation |
Score |
| 2024 |
Schubach M, Maass T, Nazaretyan L, Röner S, Kircher M. CADD v1.7: using protein language models, regulatory CNNs and other nucleotide-level scores to improve genome-wide variant predictions. Nucleic Acids Research. 52: D1143-D1154. PMID 38183205 DOI: 10.1093/nar/gkad989 |
0.325 |
|
| 2023 |
Agarwal V, Inoue F, Schubach M, Martin BK, Dash PM, Zhang Z, Sohota A, Noble WS, Yardimci GG, Kircher M, Shendure J, Ahituv N. Massively parallel characterization of transcriptional regulatory elements in three diverse human cell types. Biorxiv : the Preprint Server For Biology. PMID 36945371 DOI: 10.1101/2023.03.05.531189 |
0.496 |
|
| 2023 |
Mensah MA, Niskanen H, Magalhaes AP, Basu S, Kircher M, Sczakiel HL, Reiter AMV, Elsner J, Meinecke P, Biskup S, Chung BHY, Dombrowsky G, Eckmann-Scholz C, Hitz MP, Hoischen A, et al. Aberrant phase separation and nucleolar dysfunction in rare genetic diseases. Nature. PMID 36755093 DOI: 10.1038/s41586-022-05682-1 |
0.304 |
|
| 2023 |
Whalen S, Inoue F, Ryu H, Fair T, Markenscoff-Papadimitriou E, Keough K, Kircher M, Martin B, Alvarado B, Elor O, Laboy Cintron D, Williams A, Hassan Samee MA, Thomas S, Krencik R, et al. Machine learning dissection of human accelerated regions in primate neurodevelopment. Neuron. PMID 36640767 DOI: 10.1016/j.neuron.2022.12.026 |
0.456 |
|
| 2022 |
Schubach M, Nazaretyan L, Kircher M. The Regulatory Mendelian Mutation score for GRCh38. Gigascience. 12. PMID 37083939 DOI: 10.1093/gigascience/giad024 |
0.341 |
|
| 2022 |
Kircher M, Ludwig KU. Systematic assays and resources for the functional annotation of non-coding variants. Medizinische Genetik : Mitteilungsblatt Des Berufsverbandes Medizinische Genetik E.V. 34: 275-286. PMID 37034418 DOI: 10.1515/medgen-2022-2161 |
0.325 |
|
| 2022 |
Johnsen JM, Fletcher SN, Dove A, McCracken H, Martin BK, Kircher M, Josephson NC, Shendure J, Ruuska SE, Valentino LA, Pierce GF, Watson C, Cheng D, Recht M, Konkle BA. Results of Genetic Analysis of 11,341 Participants Enrolled in the My Life, Our Future Hemophilia Genotyping Initiative in the United States. Journal of Thrombosis and Haemostasis : Jth. PMID 35770352 DOI: 10.1111/jth.15805 |
0.465 |
|
| 2022 |
Spielmann M, Kircher M. Computational and experimental methods for classifying variants of unknown clinical significance. Cold Spring Harbor Molecular Case Studies. 8. PMID 35483875 DOI: 10.1101/mcs.a006196 |
0.354 |
|
| 2022 |
Kleinert P, Kircher M. A framework to score the effects of structural variants in health and disease. Genome Research. PMID 35197310 DOI: 10.1101/gr.275995.121 |
0.34 |
|
| 2021 |
Rentzsch P, Schubach M, Shendure J, Kircher M. CADD-Splice-improving genome-wide variant effect prediction using deep learning-derived splice scores. Genome Medicine. 13: 31. PMID 33618777 DOI: 10.1186/s13073-021-00835-9 |
0.512 |
|
| 2020 |
Gordon MG, Inoue F, Martin B, Schubach M, Agarwal V, Whalen S, Feng S, Zhao J, Ashuach T, Ziffra R, Kreimer A, Georgakopoulos-Soares I, Yosef N, Ye CJ, Pollard KS, ... ... Kircher M, et al. Author Correction: lentiMPRA and MPRAflow for high-throughput functional characterization of gene regulatory elements. Nature Protocols. PMID 33128032 DOI: 10.1038/s41596-020-00422-z |
0.408 |
|
| 2020 |
Klein JC, Agarwal V, Inoue F, Keith A, Martin B, Kircher M, Ahituv N, Shendure J. A systematic evaluation of the design and context dependencies of massively parallel reporter assays. Nature Methods. PMID 33046894 DOI: 10.1038/s41592-020-0965-y |
0.445 |
|
| 2020 |
Gordon MG, Inoue F, Martin B, Schubach M, Agarwal V, Whalen S, Feng S, Zhao J, Ashuach T, Ziffra R, Kreimer A, Georgakopoulous-Soares I, Yosef N, Ye CJ, Pollard KS, ... ... Kircher M, et al. lentiMPRA and MPRAflow for high-throughput functional characterization of gene regulatory elements. Nature Protocols. PMID 32641802 DOI: 10.1038/S41596-020-0333-5 |
0.525 |
|
| 2020 |
Kleinert P, Martin B, Kircher M. HemoMIPs-Automated analysis and result reporting pipeline for targeted sequencing data. Plos Computational Biology. 16: e1007956. PMID 32497118 DOI: 10.1371/Journal.Pcbi.1007956 |
0.383 |
|
| 2019 |
Alexander J, Findlay GM, Kircher M, Shendure J. Concurrent genome and epigenome editing by CRISPR-mediated sequence replacement. Bmc Biology. 17: 90. PMID 31739790 DOI: 10.1186/S12915-019-0711-Z |
0.544 |
|
| 2019 |
Kircher M, Xiong C, Martin B, Schubach M, Inoue F, Bell RJA, Costello JF, Shendure J, Ahituv N. Saturation mutagenesis of twenty disease-associated regulatory elements at single base-pair resolution. Nature Communications. 10: 3583. PMID 31395865 DOI: 10.1038/S41467-019-11526-W |
0.563 |
|
| 2019 |
Shigaki D, Adato O, Adhikar AN, Dong S, Hawkins-Hooker A, Inoue F, Juven-Gershon T, Kenlay H, Martin B, Patra A, Penzar DP, Schubach M, Xiong C, Yan Z, Boyle AP, ... ... Kircher M, et al. Integration of Multiple Epigenomic Marks Improves Prediction of Variant Impact in Saturation Mutagenesis Reporter Assay. Human Mutation. PMID 31106481 DOI: 10.1002/Humu.23797 |
0.552 |
|
| 2019 |
Ng BG, Lourenço CM, Losfeld ME, Buckingham KJ, Kircher M, Nickerson DA, Shendure J, Bamshad MJ, Freeze HH. Mutations in the translocon associated protein complex subunit SSR3 cause a novel Congenital Disorder of Glycosylation. Journal of Inherited Metabolic Disease. PMID 30945312 DOI: 10.1002/Jimd.12091 |
0.565 |
|
| 2018 |
LaCroix AJ, Stabley D, Sahraoui R, Adam MP, Mehaffey M, Kernan K, Myers CT, Fagerstrom C, Anadiotis G, Akkari YM, Robbins KM, Gripp KW, Baratela WAR, Bober MB, Duker AL, ... ... Kircher M, et al. GGC Repeat Expansion and Exon 1 Methylation of XYLT1 Is a Common Pathogenic Variant in Baratela-Scott Syndrome. American Journal of Human Genetics. PMID 30554721 DOI: 10.1016/J.Ajhg.2018.11.005 |
0.479 |
|
| 2018 |
Wambach JA, Wegner DJ, Patni N, Kircher M, Willing MC, Baldridge D, Xing C, Agarwal AK, Vergano SAS, Patel C, Grange DK, Kenney A, Najaf T, Nickerson DA, Bamshad MJ, et al. Bi-allelic POLR3A Loss-of-Function Variants Cause Autosomal-Recessive Wiedemann-Rautenstrauch Syndrome. American Journal of Human Genetics. PMID 30414627 DOI: 10.1016/J.Ajhg.2018.10.010 |
0.338 |
|
| 2018 |
Rentzsch P, Witten D, Cooper GM, Shendure J, Kircher M. CADD: predicting the deleteriousness of variants throughout the human genome. Nucleic Acids Research. PMID 30371827 DOI: 10.1093/Nar/Gky1016 |
0.583 |
|
| 2018 |
Ng BG, Underhill HR, Palm L, Bengtson P, Rozet JM, Gerber S, Munnich A, Zanlonghi X, Stevens CA, Kircher M, Nickerson DA, Buckingham KJ, Josephson KD, Shendure J, Bamshad MJ, et al. DPAGT1 Deficiency with Encephalopathy (DPAGT1-CDG): Clinical and Genetic Description of 11 New Patients. Jimd Reports. PMID 30117111 DOI: 10.1007/8904_2018_128 |
0.486 |
|
| 2018 |
Matreyek KA, Starita LM, Stephany JJ, Martin B, Chiasson MA, Gray VE, Kircher M, Khechaduri A, Dines JN, Hause RJ, Bhatia S, Evans WE, Relling MV, Yang W, Shendure J, et al. Multiplex assessment of protein variant abundance by massively parallel sequencing. Nature Genetics. PMID 29785012 DOI: 10.1038/S41588-018-0122-Z |
0.585 |
|
| 2018 |
Inoue F, Kircher M, Martin B, Cooper GM, Witten DM, McManus MT, Ahituv N, Shendure J. Corrigendum: A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity. Genome Research. 28: 766.3. PMID 29717003 DOI: 10.1101/gr.237321.118 |
0.377 |
|
| 2018 |
Sukenik Halevy R, Chien HC, Heinz B, Bamshad MJ, Nickerson DA, Kircher M, Ahituv N. Mutations in the fourth β-propeller domain of LRP4 are associated with isolated syndactyly with fusion of the third and fourth fingers. Human Mutation. PMID 29524275 DOI: 10.1002/Humu.23417 |
0.327 |
|
| 2017 |
Johnsen JM, Fletcher SN, Huston H, Roberge S, Martin BK, Kircher M, Josephson NC, Shendure J, Ruuska S, Koerper MA, Morales J, Pierce GF, Aschman DJ, Konkle BA. Novel approach to genetic analysis and results in 3000 hemophilia patients enrolled in the My Life, Our Future initiative. Blood Advances. 1: 824-834. PMID 29296726 DOI: 10.1182/Bloodadvances.2016002923 |
0.569 |
|
| 2017 |
Ng BG, Asteggiano CG, Kircher M, Buckingham KJ, Raymond K, Nickerson DA, Shendure J, Bamshad MJ, Ensslen M, Freeze HH. Encephalopathy caused by novel mutations in the CMP-sialic acid transporter, SLC35A1. American Journal of Medical Genetics. Part A. PMID 28856833 DOI: 10.1002/Ajmg.A.38412 |
0.511 |
|
| 2017 |
Chang D, Knapp M, Enk J, Lippold S, Kircher M, Lister A, MacPhee RD, Widga C, Czechowski P, Sommer R, Hodges E, Stümpel N, Barnes I, Dalén L, Derevianko A, et al. The evolutionary and phylogeographic history of woolly mammoths: a comprehensive mitogenomic analysis. Scientific Reports. 7: 44585. PMID 28327635 DOI: 10.1038/Srep44585 |
0.341 |
|
| 2017 |
Simon MT, Ng BG, Friederich MW, Wang RY, Boyer M, Kircher M, Collard R, Buckingham KJ, Chang R, Shendure J, Nickerson DA, Bamshad MJ, Van Hove JL, Freeze HH, et al. Activation of a cryptic splice site in the mitochondrial elongation factor GFM1 causes combined OXPHOS deficiency. Mitochondrion. PMID 28216230 DOI: 10.1016/J.Mito.2017.02.004 |
0.538 |
|
| 2016 |
Inoue F, Kircher M, Martin B, Cooper GM, Witten DM, McManus MT, Ahituv N, Shendure J. A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity. Genome Research. PMID 27831498 DOI: 10.1101/Gr.212092.116 |
0.539 |
|
| 2016 |
Mirzaa G, Timms AE, Conti V, Boyle EA, Girisha KM, Martin B, Kircher M, Olds C, Juusola J, Collins S, Park K, Carter M, Glass I, Krägeloh-Mann I, Chitayat D, et al. PIK3CA-associated developmental disorders exhibit distinct classes of mutations with variable expression and tissue distribution. Jci Insight. 1. PMID 27631024 DOI: 10.1172/Jci.Insight.87623 |
0.562 |
|
| 2016 |
Wheeler PG, Ng BG, Sanford L, Sutton VR, Bartholomew DW, Pastore MT, Bamshad MJ, Kircher M, Buckingham KJ, Nickerson DA, Shendure J, Freeze HH. SRD5A3-CDG: Expanding the phenotype of a congenital disorder of glycosylation with emphasis on adult onset features. American Journal of Medical Genetics. Part A. PMID 27480077 DOI: 10.1002/Ajmg.A.37875 |
0.504 |
|
| 2016 |
Alazami AM, Al-Qattan SM, Faqeih E, Alhashem A, Alshammari M, Alzahrani F, Al-Dosari MS, Patel N, Alsagheir A, Binabbas B, Alzaidan H, Alsiddiky A, Alharbi N, Alfadhel M, Kentab A, ... ... Kircher M, et al. Expanding the clinical and genetic heterogeneity of hereditary disorders of connective tissue. Human Genetics. PMID 27023906 DOI: 10.1007/S00439-016-1660-Z |
0.582 |
|
| 2016 |
Ng BG, Shiryaev SA, Rymen D, Eklund EA, Raymond K, Kircher M, Abdenur JE, Alehan F, Midro AT, Bamshad MJ, Barone R, Berry GT, Brumbaugh JE, Buckingham KJ, Clarkson K, et al. ALG1-CDG: Clinical and Molecular Characterization of 39 Unreported Patients. Human Mutation. PMID 26931382 DOI: 10.1002/Humu.22983 |
0.548 |
|
| 2016 |
Kuhlwilm M, Gronau I, Hubisz MJ, de Filippo C, Prado-Martinez J, Kircher M, Fu Q, Burbano HA, Lalueza-Fox C, de la Rasilla M, Rosas A, Rudan P, Brajkovic D, Kucan Ž, Gušic I, et al. Ancient gene flow from early modern humans into Eastern Neanderthals. Nature. PMID 26886800 DOI: 10.1038/Nature16544 |
0.385 |
|
| 2016 |
Snyder MW, Kircher M, Hill AJ, Daza RM, Shendure J. Cell-free DNA Comprises an In Vivo Nucleosome Footprint that Informs Its Tissues-Of-Origin. Cell. 164: 57-68. PMID 26771485 DOI: 10.1097/Tp.0000000000001176 |
0.636 |
|
| 2016 |
Johnsen J, Fletcher SN, Huston H, Roberge S, Martin BK, Kircher M, Josephson NC, Shendure J, Ruuska S, Koerper MA, Meltzer L, Pierce GF, Aschman D, Konkle B. Novel Approach to and Results of Genetic Analysis of 3000 Hemophilia Patients Enrolled in the MyLifeOurFuture Initiative Blood. 128: 205-205. DOI: 10.1182/Blood.V128.22.205.205 |
0.554 |
|
| 2016 |
Snyder MW, Kircher M, Hill AJ, Daza RM, Shendure J. Cell-free DNA comprises an in vivo nucleosome footprint that informs its tissues-of-origin Transplantation. 100: 698. DOI: 10.1097/TP.0000000000001176 |
0.438 |
|
| 2015 |
Shaheen R, Patel N, Shamseldin H, Alzahrani F, Al-Yamany R, ALMoisheer A, Ewida N, Anazi S, Alnemer M, Elsheikh M, Alfaleh K, Alshammari M, Alhashem A, Alangari AA, Salih MA, ... Kircher M, et al. Accelerating matchmaking of novel dysmorphology syndromes through clinical and genomic characterization of a large cohort. Genetics in Medicine : Official Journal of the American College of Medical Genetics. PMID 26633546 DOI: 10.1038/Gim.2015.147 |
0.519 |
|
| 2015 |
Ng BG, Raymond K, Kircher M, Buckingham KJ, Wood T, Shendure J, Nickerson DA, Bamshad MJ, Wong JT, Monteiro FP, Graham BH, Jackson S, Sparkes R, Scheuerle AE, Cathey S, et al. Expanding the Molecular and Clinical Phenotype of SSR4-CDG. Human Mutation. PMID 26264460 DOI: 10.1002/Humu.22856 |
0.587 |
|
| 2015 |
Kircher M, Shendure J. Running spell-check to identify regulatory variants. Nature Genetics. 47: 853-5. PMID 26220134 DOI: 10.1038/Ng.3364 |
0.561 |
|
| 2015 |
Chong JX, Buckingham KJ, Jhangiani SN, Boehm C, Sobreira N, Smith JD, Harrell TM, McMillin MJ, Wiszniewski W, Gambin T, Coban Akdemir ZH, Doheny K, Scott AF, Avramopoulos D, Chakravarti A, ... ... Kircher M, et al. The Genetic Basis of Mendelian Phenotypes: Discoveries, Challenges, and Opportunities. American Journal of Human Genetics. 97: 199-215. PMID 26166479 DOI: 10.1016/J.Ajhg.2015.06.009 |
0.599 |
|
| 2015 |
Fairfield H, Srivastava A, Ananda G, Liu R, Kircher M, Lakshminarayana A, Harris BS, Karst SY, Dionne LA, Kane CC, Curtain M, Berry ML, Ward-Bailey PF, Greenstein I, Byers C, et al. Exome sequencing reveals pathogenic mutations in 91 strains of mice with Mendelian disorders. Genome Research. 25: 948-57. PMID 25917818 DOI: 10.1101/Gr.186882.114 |
0.603 |
|
| 2015 |
Garg A, Kircher M, Del Campo M, Amato RS, Agarwal AK. Whole exome sequencing identifies de novo heterozygous CAV1 mutations associated with a novel neonatal onset lipodystrophy syndrome. American Journal of Medical Genetics. Part A. PMID 25898808 DOI: 10.1002/Ajmg.A.37115 |
0.38 |
|
| 2015 |
Hughes DA, Kircher M, He Z, Guo S, Fairbrother GL, Moreno CS, Khaitovich P, Stoneking M. Evaluating intra- and inter-individual variation in the human placental transcriptome. Genome Biology. 16: 54. PMID 25887593 DOI: 10.1186/S13059-015-0627-Z |
0.366 |
|
| 2015 |
Kircher M, Shendure J. Running spell-check to identify regulatory variants Nature Genetics. 47: 853-855. DOI: 10.1038/ng.3364 |
0.475 |
|
| 2015 |
Chong JX, Buckingham KJ, Jhangiani SN, Boehm C, Sobreira N, Smith JD, Harrell TM, McMillin MJ, Wiszniewski W, Gambin T, CobanAkdemir ZH, Doheny K, Scott AF, Avramopoulos D, Chakravarti A, ... ... Kircher M, et al. The Genetic Basis of Mendelian Phenotypes: Discoveries, Challenges, and Opportunities American Journal of Human Genetics. DOI: 10.1016/j.ajhg.2015.06.009 |
0.461 |
|
| 2014 |
Jamuar SS, Lam AT, Kircher M, D'Gama AM, Wang J, Barry BJ, Zhang X, Hill RS, Partlow JN, Rozzo A, Servattalab S, Mehta BK, Topcu M, Amrom D, Andermann E, et al. Somatic mutations in cerebral cortical malformations. The New England Journal of Medicine. 371: 733-43. PMID 25140959 DOI: 10.1056/Nejmoa1314432 |
0.585 |
|
| 2014 |
Castellano S, Parra G, Sánchez-Quinto FA, Racimo F, Kuhlwilm M, Kircher M, Sawyer S, Fu Q, Heinze A, Nickel B, Dabney J, Siebauer M, White L, Burbano HA, Renaud G, et al. Patterns of coding variation in the complete exomes of three Neandertals. Proceedings of the National Academy of Sciences of the United States of America. 111: 6666-71. PMID 24753607 DOI: 10.1073/Pnas.1405138111 |
0.405 |
|
| 2014 |
Schubert M, Ermini L, Der Sarkissian C, Jónsson H, Ginolhac A, Schaefer R, Martin MD, Fernández R, Kircher M, McCue M, Willerslev E, Orlando L. Characterization of ancient and modern genomes by SNP detection and phylogenomic and metagenomic analysis using PALEOMIX. Nature Protocols. 9: 1056-82. PMID 24722405 DOI: 10.1038/Nprot.2014.063 |
0.394 |
|
| 2014 |
Wunderlich S, Kircher M, Vieth B, Haase A, Merkert S, Beier J, Göhring G, Glage S, Schambach A, Curnow EC, Pääbo S, Martin U, Enard W. Primate iPS cells as tools for evolutionary analyses. Stem Cell Research. 12: 622-9. PMID 24631741 DOI: 10.1016/J.Scr.2014.02.001 |
0.315 |
|
| 2014 |
Knowles MR, Ostrowski LE, Leigh MW, Sears PR, Davis SD, Wolf WE, Hazucha MJ, Carson JL, Olivier KN, Sagel SD, Rosenfeld M, Ferkol TW, Dell SD, Milla CE, Randell SH, ... ... Kircher M, et al. Mutations in RSPH1 cause primary ciliary dyskinesia with a unique clinical and ciliary phenotype. American Journal of Respiratory and Critical Care Medicine. 189: 707-17. PMID 24568568 DOI: 10.1164/Rccm.201311-2047Oc |
0.574 |
|
| 2014 |
Kircher M, Witten DM, Jain P, O'Roak BJ, Cooper GM, Shendure J. A general framework for estimating the relative pathogenicity of human genetic variants. Nature Genetics. 46: 310-5. PMID 24487276 DOI: 10.1038/Ng.2892 |
0.719 |
|
| 2014 |
Heyn P, Kircher M, Dahl A, Kelso J, Tomancak P, Kalinka AT, Neugebauer KM. The earliest transcribed zygotic genes are short, newly evolved, and different across species. Cell Reports. 6: 285-92. PMID 24440719 DOI: 10.1016/J.Celrep.2013.12.030 |
0.341 |
|
| 2014 |
Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, Li H, Mallick S, Dannemann M, Fu Q, Kircher M, et al. The complete genome sequence of a Neanderthal from the Altai Mountains. Nature. 505: 43-9. PMID 24352235 DOI: 10.1038/Nature12886 |
0.709 |
|
| 2014 |
Losfeld ME, Ng BG, Kircher M, Buckingham KJ, Turner EH, Eroshkin A, Smith JD, Shendure J, Nickerson DA, Bamshad MJ, Freeze HH. A new congenital disorder of glycosylation caused by a mutation in SSR4, the signal sequence receptor 4 protein of the TRAP complex. Human Molecular Genetics. 23: 1602-5. PMID 24218363 DOI: 10.1093/Hmg/Ddt550 |
0.65 |
|
| 2013 |
Ng BG, Buckingham KJ, Raymond K, Kircher M, Turner EH, He M, Smith JD, Eroshkin A, Szybowska M, Losfeld ME, Chong JX, Kozenko M, Li C, Patterson MC, Gilbert RD, et al. Mosaicism of the UDP-galactose transporter SLC35A2 causes a congenital disorder of glycosylation. American Journal of Human Genetics. 92: 632-6. PMID 23561849 DOI: 10.1016/J.Ajhg.2013.03.012 |
0.666 |
|
| 2013 |
Renaud G, Kircher M, Stenzel U, Kelso J. freeIbis: an efficient basecaller with calibrated quality scores for Illumina sequencers. Bioinformatics (Oxford, England). 29: 1208-1209. PMID 23471300 DOI: 10.1093/Bioinformatics/Btt117 |
0.358 |
|
| 2013 |
Good JM, Wiebe V, Albert FW, Burbano HA, Kircher M, Green RE, Halbwax M, André C, Atencia R, Fischer A, Pääbo S. Comparative population genomics of the ejaculate in humans and the great apes. Molecular Biology and Evolution. 30: 964-76. PMID 23329688 DOI: 10.1093/Molbev/Mst005 |
0.379 |
|
| 2012 |
Meyer M, Kircher M, Gansauge MT, Li H, Racimo F, Mallick S, Schraiber JG, Jay F, Prüfer K, de Filippo C, Sudmant PH, Alkan C, Fu Q, Do R, Rohland N, et al. A high-coverage genome sequence from an archaic Denisovan individual. Science (New York, N.Y.). 338: 222-6. PMID 22936568 DOI: 10.1126/Science.1224344 |
0.717 |
|
| 2012 |
Fietz SA, Lachmann R, Brandl H, Kircher M, Samusik N, Schröder R, Lakshmanaperumal N, Henry I, Vogt J, Riehn A, Distler W, Nitsch R, Enard W, Pääbo S, Huttner WB. Transcriptomes of germinal zones of human and mouse fetal neocortex suggest a role of extracellular matrix in progenitor self-renewal. Proceedings of the National Academy of Sciences of the United States of America. 109: 11836-41. PMID 22753484 DOI: 10.1073/Pnas.1209647109 |
0.31 |
|
| 2012 |
Kircher M. Analysis of high-throughput ancient DNA sequencing data Methods in Molecular Biology. 840: 197-228. PMID 22237537 DOI: 10.1007/978-1-61779-516-9_23 |
0.38 |
|
| 2012 |
Kircher M, Sawyer S, Meyer M. Double indexing overcomes inaccuracies in multiplex sequencing on the Illumina platform. Nucleic Acids Research. 40: e3. PMID 22021376 DOI: 10.1093/Nar/Gkr771 |
0.378 |
|
| 2012 |
Kircher M. Analysis of a high coverage genome of a Denisovan individual F1000research. 3. DOI: 10.7490/F1000Research.1092247.1 |
0.356 |
|
| 2011 |
Nagaraj N, Wisniewski JR, Geiger T, Cox J, Kircher M, Kelso J, Pääbo S, Mann M. Deep proteome and transcriptome mapping of a human cancer cell line. Molecular Systems Biology. 7: 548. PMID 22068331 DOI: 10.1038/Msb.2011.81 |
0.313 |
|
| 2011 |
Brawand D, Soumillon M, Necsulea A, Julien P, Csárdi G, Harrigan P, Weier M, Liechti A, Aximu-Petri A, Kircher M, Albert FW, Zeller U, Khaitovich P, Grützner F, Bergmann S, et al. The evolution of gene expression levels in mammalian organs. Nature. 478: 343-8. PMID 22012392 DOI: 10.1038/Nature10532 |
0.323 |
|
| 2011 |
Reich D, Patterson N, Kircher M, Delfin F, Nandineni MR, Pugach I, Ko AM, Ko YC, Jinam TA, Phipps ME, Saitou N, Wollstein A, Kayser M, Pääbo S, Stoneking M. Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania. American Journal of Human Genetics. 89: 516-28. PMID 21944045 DOI: 10.1016/J.Ajhg.2011.09.005 |
0.305 |
|
| 2011 |
Kircher M, Heyn P, Kelso J. Addressing challenges in the production and analysis of illumina sequencing data Bmc Genomics. 12. PMID 21801405 DOI: 10.1186/1471-2164-12-382 |
0.383 |
|
| 2010 |
Reich D, Green RE, Kircher M, Krause J, Patterson N, Durand EY, Viola B, Briggs AW, Stenzel U, Johnson PL, Maricic T, Good JM, Marques-Bonet T, Alkan C, Fu Q, et al. Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature. 468: 1053-60. PMID 21179161 DOI: 10.1038/Nature09710 |
0.408 |
|
| 2010 |
Meyer M, Kircher M. Illumina sequencing library preparation for highly multiplexed target capture and sequencing. Cold Spring Harbor Protocols. 2010: pdb.prot5448. PMID 20516186 DOI: 10.1101/Pdb.Prot5448 |
0.385 |
|
| 2010 |
Kircher M, Kelso J. High-throughput DNA sequencing - Concepts and limitations Bioessays. 32: 524-536. PMID 20486139 DOI: 10.1002/Bies.200900181 |
0.375 |
|
| 2010 |
Green RE, Krause J, Briggs AW, Maricic T, Stenzel U, Kircher M, Patterson N, Li H, Zhai W, Fritz MH, Hansen NF, Durand EY, Malaspinas AS, Jensen JD, Marques-Bonet T, et al. A draft sequence of the Neandertal genome. Science (New York, N.Y.). 328: 710-22. PMID 20448178 DOI: 10.1126/Science.1188021 |
0.422 |
|
| 2010 |
Krause J, Briggs AW, Kircher M, Maricic T, Zwyns N, Derevianko A, Pääbo S. A complete mtDNA genome of an early modern human from Kostenki, Russia. Current Biology : Cb. 20: 231-6. PMID 20045327 DOI: 10.1016/J.Cub.2009.11.068 |
0.395 |
|
| 2009 |
Kircher M, Stenzel U, Kelso J. Improved base calling for the Illumina Genome Analyzer using machine learning strategies. Genome Biology. 10: R83. PMID 19682367 DOI: 10.1186/Gb-2009-10-8-R83 |
0.364 |
|
| Low-probability matches (unlikely to be authored by this person) |
| 2024 |
Balachandran S, Prada-Medina CA, Mensah MA, Kakar N, Nagel I, Pozojevic J, Audain E, Hitz MP, Kircher M, Sreenivasan VKA, Spielmann M. STIGMA: Single-cell tissue-specific gene prioritization using machine learning. American Journal of Human Genetics. PMID 38228144 DOI: 10.1016/j.ajhg.2023.12.011 |
0.291 |
|
| 2010 |
Briggs AW, Stenzel U, Meyer M, Krause J, Kircher M, Pääbo S. Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA. Nucleic Acids Research. 38: e87. PMID 20028723 DOI: 10.1093/Nar/Gkp1163 |
0.277 |
|
| 2010 |
Heyn P, Stenzel U, Briggs AW, Kircher M, Hofreiter M, Meyer M. Road blocks on paleogenomes--polymerase extension profiling reveals the frequency of blocking lesions in ancient DNA Nucleic Acids Research. 38: e161. PMID 20587499 DOI: 10.1093/Nar/Gkq572 |
0.272 |
|
| 2008 |
Kircher M, Bock C, Paulsen M. Structural conservation versus functional divergence of maternally expressed microRNAs in the Dlk1/Gtl2 imprinting region. Bmc Genomics. 9: 346. PMID 18651963 DOI: 10.1186/1471-2164-9-346 |
0.264 |
|
| 2012 |
Hering L, Henze MJ, Kohler M, Kelber A, Bleidorn C, Leschke M, Nickel B, Meyer M, Kircher M, Sunnucks P, Mayer G. Opsins in onychophora (velvet worms) suggest a single origin and subsequent diversification of visual pigments in arthropods. Molecular Biology and Evolution. 29: 3451-8. PMID 22683812 DOI: 10.1093/Molbev/Mss148 |
0.261 |
|
| 2020 |
Krützfeldt LM, Schubach M, Kircher M. The impact of different negative training data on regulatory sequence predictions. Plos One. 15: e0237412. PMID 33259518 DOI: 10.1371/journal.pone.0237412 |
0.25 |
|
| 2023 |
Schmidt A, Röner S, Mai K, Klinkhammer H, Kircher M, Ludwig KU. Predicting the pathogenicity of missense variants using features derived from AlphaFold2. Bioinformatics (Oxford, England). PMID 37084271 DOI: 10.1093/bioinformatics/btad280 |
0.247 |
|
| 2015 |
Sawyer SL, Tian L, Kähkönen M, Schwartzentruber J, Kircher M, Majewski J, Dyment DA, Innes AM, Boycott KM, Moreau LA, Moilanen JS, Greenberg RA. Biallelic mutations in BRCA1 cause a new Fanconi anemia subtype. Cancer Discovery. 5: 135-42. PMID 25472942 DOI: 10.1158/2159-8290.CD-14-1156 |
0.216 |
|
| 2011 |
Kircher M, Kelso J. Computational challenges in the production and analysis of Illumina data F1000research. 2. DOI: 10.7490/F1000Research.1955.1 |
0.214 |
|
| 2022 |
Cappelletti L, Petrini A, Gliozzo J, Casiraghi E, Schubach M, Kircher M, Valentini G. Boosting tissue-specific prediction of active cis-regulatory regions through deep learning and Bayesian optimization techniques. Bmc Bioinformatics. 23: 154. PMID 36510125 DOI: 10.1186/s12859-022-04582-5 |
0.211 |
|
| 2023 |
Spiegl B, Kapidzic F, Röner S, Kircher M, Speicher MR. GCparagon: evaluating and correcting GC biases in cell-free DNA at the fragment level. Nar Genomics and Bioinformatics. 5: lqad102. PMID 38025047 DOI: 10.1093/nargab/lqad102 |
0.207 |
|
| 2010 |
Meyer M, Kircher M. Illumina sequencing library preparation for highly multiplexed target capture and sequencing Cold Spring Harbor Protocols. 5. DOI: 10.1101/pdb.prot5448 |
0.206 |
|
| 1983 |
Kircher M, Brendel M. DNA alkylation by mustard gas in yeast strains of different repair capacity Chemico-Biological Interactions. 44: 27-39. PMID 6342826 DOI: 10.1016/0009-2797(83)90127-8 |
0.135 |
|
| 1991 |
Eikmanns BJ, Kircher M, Reinscheid DJ. Discrimination of Corynebacterium glutamicum, Brevibacterium flavum and Brevibacterium lactofermentum by restriction pattern analysis of DNA adjacent to the hom gene. Fems Microbiology Letters. 66: 203-7. PMID 1682208 |
0.129 |
|
| 1979 |
Kircher M, Fleer R, Ruhland A, Brendel M. Biological and chemical effects of mustard gas in yeast Mutation Research - Fundamental and Molecular Mechanisms of Mutagenesis. 63: 273-289. PMID 392310 DOI: 10.1016/0027-5107(79)90059-9 |
0.122 |
|
| 2011 |
Kircher MF, Gambhir SS, Grimm J. Noninvasive cell-tracking methods Nature Reviews Clinical Oncology. 8: 677-688. PMID 21946842 DOI: 10.1038/Nrclinonc.2011.141 |
0.119 |
|
| 2007 |
Grimm J, Kircher MF, Weissleder R. [Cell tracking. Principles and applications]. Der Radiologe. 47: 25-33. PMID 17187264 DOI: 10.1007/S00117-006-1449-5 |
0.115 |
|
| 2024 |
Balachandran S, Prada-Medina CA, Mensah MA, Glaser J, Kakar N, Nagel I, Pozojevic J, Audain E, Hitz MP, Kircher M, Sreenivasan VKA, Spielmann M. STIGMA: Single-cell tissue-specific gene prioritization using machine learning. American Journal of Human Genetics. 111: 618. PMID 38458167 DOI: 10.1016/j.ajhg.2024.01.009 |
0.102 |
|
| 1991 |
Eikmanns BJ, Metzger M, Reinscheid D, Kircher M, Sahm H. Amplification of three threonine biosynthesis genes in Corynebacterium glutamicum and its influence on carbon flux in different strains. Applied Microbiology and Biotechnology. 34: 617-22. PMID 1369320 DOI: 10.1007/BF00167910 |
0.097 |
|
| 2006 |
Swirski FK, Pittet MJ, Kircher MF, Aikawa E, Jaffer FA, Libby P, Weissleder R. Monocyte accumulation in mouse atherogenesis is progressive and proportional to extent of disease. Proceedings of the National Academy of Sciences of the United States of America. 103: 10340-5. PMID 16801531 DOI: 10.1073/Pnas.0604260103 |
0.095 |
|
| 2002 |
Kircher MF, Haeusler T, Nickel R, Lamb JR, Renz H, Beyer K. Vbeta18.1(+) and V(alpha)2.3(+) T-cell subsets are associated with house dust mite allergy in human subjects. The Journal of Allergy and Clinical Immunology. 109: 517-23. PMID 11898001 DOI: 10.1067/mai.2002.121945 |
0.095 |
|
| 2003 |
Kircher MF, Allport JR, Graves EE, Love V, Josephson L, Lichtman AH, Weissleder R. In vivo high resolution three-dimensional imaging of antigen-specific cytotoxic T-lymphocyte trafficking to tumors. Cancer Research. 63: 6838-46. PMID 14583481 |
0.082 |
|
| 1999 |
Beyer K, Häusler T, Kircher M, Nickel R, Wahn U, Renz H. Specific V beta T cell subsets are associated with cat and birch pollen allergy in humans. Journal of Immunology (Baltimore, Md. : 1950). 162: 1186-91. PMID 9916751 |
0.079 |
|
| 2001 |
Wang N, Schmidt DC, Kircher M, Parameswaran K. Adaptive and reflective middleware for QoS-enabled CCM applications Ieee Distributed Systems Online. 2. |
0.075 |
|
| 1981 |
Ruhland A, Kircher M, Wilborn F, Brendel M. A yeast mutant specifically sensitive to bifunctional alkylation Mutation Research Letters. 91: 457-462. PMID 7027037 DOI: 10.1016/0165-7992(81)90052-X |
0.074 |
|
| 2013 |
Jaber JJ, Kircher ML, Thorpe E, Porter RG, Leonetti JP, Marzo SJ. Recurrent post-tympanostomy tube otorrhea secondary to aerobic endospore-forming bacilli: a case report and brief literature review. Ear, Nose, & Throat Journal. 92: 66-72. PMID 23460214 |
0.074 |
|
| 2014 |
Zhang E, Kircher MF, Koch M, Eliasson L, Goldberg SN, Renström E. Dynamic magnetic fields remote-control apoptosis via nanoparticle rotation. Acs Nano. 8: 3192-201. PMID 24597847 DOI: 10.1021/nn406302j |
0.072 |
|
| 2012 |
Kircher M, Hofman P. Combining systematic reuse with agile development-Experience report Acm International Conference Proceeding Series. 1: 215-219. DOI: 10.1145/2362536.2362566 |
0.071 |
|
| 2015 |
Harmsen S, Huang R, Wall MA, Karabeber H, Samii JM, Spaliviero M, White JR, Monette S, O'Connor R, Pitter KL, Sastra SA, Saborowski M, Holland EC, Singer S, Olive KP, ... Kircher MF, et al. Surface-enhanced resonance Raman scattering nanostars for high-precision cancer imaging. Science Translational Medicine. 7: 271ra7. PMID 25609167 DOI: 10.1126/scitranslmed.3010633 |
0.07 |
|
| 2011 |
Zavaleta CL, Kircher MF, Gambhir SS. Raman's "effect" on molecular imaging Journal of Nuclear Medicine. 52: 1839-1844. PMID 21868625 DOI: 10.2967/Jnumed.111.087775 |
0.07 |
|
| 2015 |
Harmsen S, Bedics MA, Wall MA, Huang R, Detty MR, Kircher MF. Rational design of a chalcogenopyrylium-based surface-enhanced resonance Raman scattering nanoprobe with attomolar sensitivity. Nature Communications. 6: 6570. PMID 25800697 DOI: 10.1038/Ncomms7570 |
0.069 |
|
| 1989 |
Czuchlewski SJ, Leland WT, Kircher MJ, Greene DP, Oertel JA, Romero VO, Steele HS. Effect of volumetric ASE on the performance of large KrF amplifiers Conference On Lasers and Electro-0ptics. 340, 342-340, 343. |
0.068 |
|
| 2003 |
Struble RG, Rosario ER, Kircher ML, Ludwig SM, McAdamis PJ, Watabe K, McAsey ME, Cady C, Nathan BP. Regionally specific modulation of brain apolipoprotein E in the mouse during the estrous cycle and by exogenous 17beta estradiol. Experimental Neurology. 183: 638-44. PMID 14552905 DOI: 10.1016/S0014-4886(03)00215-2 |
0.065 |
|
| 2008 |
Kuettner EB, Keim A, Kircher M, Rosmus S, Sträter N. Active-site mobility revealed by the crystal structure of arylmalonate decarboxylase from Bordetella bronchiseptica. Journal of Molecular Biology. 377: 386-94. PMID 18258259 DOI: 10.1016/J.Jmb.2007.12.069 |
0.063 |
|
| 1993 |
Meyer MF, Taher A, Krah H, Staubesand J, Becker AJ, Kircher M, Mayer B, Jonas U, Forssmann WG, Stief CG. Intracavernous application of SIN-I in rabbit and man: functional and toxicological results. Annales D'Urologie. 27: 179-82. PMID 8352581 |
0.063 |
|
| 2004 |
Kircher MF, Weissleder R, Josephson L. A dual fluorochrome probe for imaging proteases. Bioconjugate Chemistry. 15: 242-8. PMID 15025519 DOI: 10.1021/Bc034151D |
0.061 |
|
| 2002 |
Zhao M, Kircher MF, Josephson L, Weissleder R. Differential conjugation of tat peptide to superparamagnetic nanoparticles and its effect on cellular uptake. Bioconjugate Chemistry. 13: 840-4. PMID 12121140 DOI: 10.1021/Bc0255236 |
0.059 |
|
| 2015 |
Shaffer TM, Wall MA, Harmsen S, Longo VA, Drain CM, Kircher MF, Grimm J. Silica nanoparticles as substrates for chelator-free labeling of oxophilic radioisotopes. Nano Letters. 15: 864-8. PMID 25559467 DOI: 10.1021/Nl503522Y |
0.058 |
|
| 2006 |
Kircher M, Schwanninger C, Groher I. Transitioning to a software product family approach -challenges and best practices Proceedings - 10th International Software Product Line Conference, Splc 2006. 163-171. |
0.057 |
|
| 2003 |
Koch AM, Reynolds F, Kircher MF, Merkle HP, Weissleder R, Josephson L. Uptake and metabolism of a dual fluorochrome Tat-nanoparticle in HeLa cells. Bioconjugate Chemistry. 14: 1115-21. PMID 14624624 DOI: 10.1021/Bc034123V |
0.056 |
|
| 2012 |
Kircher MF, Willmann JK. Molecular body imaging: MR imaging, CT, and US. Part I. Principles Radiology. 263: 633-643. PMID 22623690 DOI: 10.1148/radiol.12102394 |
0.055 |
|
| 2006 |
Vianello F, Papeta N, Chen T, Kraft P, White N, Hart WK, Kircher MF, Swart E, Rhee S, Palù G, Irimia D, Toner M, Weissleder R, Poznansky MC. Murine B16 melanomas expressing high levels of the chemokine stromal-derived factor-1/CXCL12 induce tumor-specific T cell chemorepulsion and escape from immune control. Journal of Immunology (Baltimore, Md. : 1950). 176: 2902-14. PMID 16493048 DOI: 10.4049/Jimmunol.176.5.2902 |
0.055 |
|
| 2012 |
Kircher MF, Hricak H, Larson SM. Molecular imaging for personalized cancer care. Molecular Oncology. 6: 182-95. PMID 22469618 DOI: 10.1016/j.molonc.2012.02.005 |
0.055 |
|
| 2002 |
Kircher MF, Josephson L, Weissleder R. Ratio imaging of enzyme activity using dual wavelength optical reporters. Molecular Imaging. 1: 89-95. PMID 12920849 DOI: 10.1162/153535002320162741 |
0.054 |
|
| 1980 |
Smith EL, Harwerth RS, Browning R, Jacobson D, Kircher ML. Stereopsis and fixation disparity following prolonged monocular occlusion. American Journal of Optometry and Physiological Optics. 57: 413-9. PMID 7406009 DOI: 10.1097/00006324-198007000-00002 |
0.053 |
|
| 2012 |
Kircher MF, Willmann JK. Molecular body imaging: MR imaging, CT, and US. Part II. Applications Radiology. 264: 349-368. PMID 22821695 DOI: 10.1148/radiol.12111703 |
0.052 |
|
| 2009 |
Adams JE, Kircher MF, Spinner RJ, Torchia ME, Bishop AT, Shin AY. Complications and outcomes of functional free gracilis transfer in brachial plexus palsy. Acta Orthopaedica Belgica. 75: 8-13. PMID 19358391 |
0.051 |
|
| 2014 |
Karabeber H, Huang R, Iacono P, Samii JM, Pitter K, Holland EC, Kircher MF. Guiding brain tumor resection using surface-enhanced Raman scattering nanoparticles and a hand-held Raman scanner. Acs Nano. 8: 9755-66. PMID 25093240 DOI: 10.1021/nn503948b |
0.051 |
|
| 2008 |
Bengtson KA, Spinner RJ, Bishop AT, Kaufman KR, Coleman-Wood K, Kircher MF, Shin AY. Measuring outcomes in adult brachial plexus reconstruction. Hand Clinics. 24: 401-15, vi. PMID 18928889 DOI: 10.1016/J.Hcl.2008.04.001 |
0.05 |
|
| 2015 |
Kempen PJ, Kircher MF, de la Zerda A, Zavaleta CL, Jokerst JV, Mellinghoff IK, Gambhir SS, Sinclair R. A correlative optical microscopy and scanning electron microscopy approach to locating nanoparticles in brain tumors. Micron (Oxford, England : 1993). 68: 70-6. PMID 25464144 DOI: 10.1016/J.Micron.2014.09.004 |
0.05 |
|
| 2007 |
Kircher MF, Milla S, Callahan MJ. Ingestion of magnetic foreign bodies causing multiple bowel perforations. Pediatric Radiology. 37: 933-6. PMID 17622522 DOI: 10.1007/s00247-007-0542-x |
0.049 |
|
| 2005 |
Kircher M. Investigation of extensive subsidence in a sedimentary region by means of new techniques of the radarinterferometry - In the region of the Lower Rhine Embayment | Analyse flächenhafter Senkungserscheinungen in sedimentären Gebieten mit den neuen Techniken der Radarfernerkundung - Am Beispiel der Niederrheinischen Bucht D L R - Forschungsberichte. |
0.048 |
|
| 2002 |
Josephson L, Kircher MF, Mahmood U, Tang Y, Weissleder R. Near-infrared fluorescent nanoparticles as combined MR/optical imaging probes. Bioconjugate Chemistry. 13: 554-60. PMID 12009946 DOI: 10.1021/Bc015555D |
0.047 |
|
| 2012 |
Giuffre JL, Bishop AT, Spinner RJ, Kircher MF, Shin AY. Wrist, first carpometacarpal joint, and thumb interphalangeal joint arthrodesis in patients with brachial plexus injuries Journal of Hand Surgery. 37: 2557-2563. PMID 23174070 DOI: 10.1016/j.jhsa.2012.09.017 |
0.047 |
|
| 2013 |
Klika BJ, Spinner RJ, Bishop AT, Kircher MF, Shin AY. Posterior branch of the axillary nerve transfer to the lateral triceps branch for restoration of elbow extension: Case report Journal of Hand Surgery. 38: 1145-1149. PMID 23707014 DOI: 10.1016/j.jhsa.2013.03.044 |
0.046 |
|
| 2005 |
Voelter M, Salzmann C, Kircher M. Model driven software development in the context of embedded component infrastructures Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 3778: 143-163. |
0.046 |
|
| 2012 |
Hofman P, Stenzel T, Pohley T, Kircher M, Bermann A. Domain specific feature modeling for software product lines Acm International Conference Proceeding Series. 1: 229-238. DOI: 10.1145/2362536.2362568 |
0.045 |
|
| 1988 |
Kircher MA. Pointers on purposeful activity study argued The American Journal of Occupational Therapy. : Official Publication of the American Occupational Therapy Association. 42: 611-612. PMID 3189493 |
0.044 |
|
| 2015 |
Andreou C, Kishore SA, Kircher MF. Surface-Enhanced Raman Spectroscopy: A New Modality for Cancer Imaging. Journal of Nuclear Medicine : Official Publication, Society of Nuclear Medicine. 56: 1295-9. PMID 26182971 DOI: 10.2967/Jnumed.115.158196 |
0.044 |
|
| 2010 |
Kircher MF, Hines-Peralta A, Boiselle PM, Donohoe K, Siewert B. Implementation of Screen-Capture Video Recordings of Resident Conferences in an Academic Radiology Department. Pilot Experience Academic Radiology. 17: 255-263. PMID 19914847 DOI: 10.1016/j.acra.2009.07.028 |
0.043 |
|
| 2011 |
Benscoter BJ, Jaber JJ, Kircher ML, Marzo SJ, Leonetti JP. Osseointegrated implant applications in cosmetic and functional skull base rehabilitation. Skull Base : Official Journal of North American Skull Base Society ... [Et Al.]. 21: 303-8. PMID 22451830 DOI: 10.1055/s-0031-1284211 |
0.043 |
|
| 2011 |
Benscoter BJ, Jaber JJ, Kircher ML, Marzo SJ, Leonetti JP. Osseointegrated implant applications in cosmetic and functional skull base rehabilitation Skull Base. 21: 303-308. DOI: 10.1055/s-0031-1284211 |
0.043 |
|
| 2010 |
Kircher MF, Lee EY, Alomari AI. MRI findings of persistent sciatic artery associated with pelvic infantile hemangioma Clinical Radiology. 65: 172-175. PMID 20103441 DOI: 10.1016/j.crad.2009.07.017 |
0.042 |
|
| 2010 |
Kircher ML, Kovanda TJ, Leonetti JP. Facial schwannoma clinical presentation and surgical managment Laryngoscope. 120: S80. DOI: 10.1002/lary.21269 |
0.042 |
|
| 2001 |
Mullins ME, Kircher MF, Ryan DP, Doody D, Mullins TC, Rhea JT, Novelline RA. Evaluation of suspected appendicitis in children using limited helical CT and colonic contrast material. Ajr. American Journal of Roentgenology. 176: 37-41. PMID 11133535 DOI: 10.2214/Ajr.176.1.1760037 |
0.041 |
|
| 2003 |
Kircher M, Roth A, Adam N, Kampes B, Neugebauer HJ. Remote Sensing Observation of Mining Induced Subsidence by means of differential SAR-Interferometry International Geoscience and Remote Sensing Symposium (Igarss). 1: 209-211. |
0.04 |
|
| 2015 |
Kircher M, Pittman A, Thorpe E, Marzo S, Leonetti J, Tsimpas A, Anderson D. Temporoparietal fascial flap repair of middle cranial fossa tegmen and dural defects. The Laryngoscope. PMID 25945717 DOI: 10.1002/lary.25331 |
0.04 |
|
| 2002 |
Baniassad ELA, Murphy GC, Schwanninger C, Kircher M. Managing Crosscutting Concerns during Software Evolution Tasks: An Inquisitive Study 1st International Conference On Aspect-Oriented Software Development. 120-126. |
0.039 |
|
| 2002 |
Kircher MF, Rhea JT, Kihiczak D, Novelline RA. Frequency, sensitivity, and specificity of individual signs of diverticulitis on thin-section helical CT with colonic contrast material: experience with 312 cases. Ajr. American Journal of Roentgenology. 178: 1313-8. PMID 12034590 DOI: 10.2214/ajr.178.6.1781313 |
0.038 |
|
| 2003 |
Kircher MF, Mahmood U, King RS, Weissleder R, Josephson L. A multimodal nanoparticle for preoperative magnetic resonance imaging and intraoperative optical brain tumor delineation. Cancer Research. 63: 8122-5. PMID 14678964 |
0.037 |
|
| 2000 |
Arulanthu AB, O’Ryan C, Schmidt DC, Kircher M, Parsons J. The design and performance of a scalable ORB architecture for CORBA asynchronous messaging Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 1795: 208-230. |
0.037 |
|
| 2015 |
Maldonado AA, Kircher MF, Spinner RJ, Bishop AT, Shin AY. The role of elective amputation in patients with traumatic brachial plexus injury. Journal of Plastic, Reconstructive & Aesthetic Surgery : Jpras. PMID 26776904 DOI: 10.1016/j.bjps.2015.10.019 |
0.036 |
|
| 1984 |
Kircher MA. Motivation as a factor of perceived exertion in purposeful versus nonpurposeful activity The American Journal of Occupational Therapy. : Official Publication of the American Occupational Therapy Association. 38: 165-170. PMID 6711668 |
0.036 |
|
| 2015 |
Chim H, Kircher MF, Spinner RJ, Bishop AT, Shin AY. Triceps motor branch transfer for isolated traumatic pediatric axillary nerve injuries Journal of Neurosurgery. Pediatrics. 15: 107-111. PMID 25396703 DOI: 10.3171/2014.9.PEDS14245 |
0.035 |
|
| 2012 |
Burgette RC, Benscoter BJ, Monaco GN, Kircher ML, Mantravadi AV, Marzo SJ, Jones KJ, Foecking EM. A rat model for intracranial facial nerve crush injuries. Otolaryngology--Head and Neck Surgery : Official Journal of American Academy of Otolaryngology-Head and Neck Surgery. 146: 326-30. PMID 22049021 DOI: 10.1177/0194599811427531 |
0.035 |
|
| 2014 |
Kircher ML, Thottam PJ, Bojrab DI, Babu SC. Utility and cost analysis of cholesteatoma histopathologic evaluation Laryngoscope. 124: 538-540. PMID 23794367 DOI: 10.1002/lary.24282 |
0.034 |
|
| 2012 |
Kircher MF, de la Zerda A, Jokerst JV, Zavaleta CL, Kempen PJ, Mittra E, Pitter K, Huang R, Campos C, Habte F, Sinclair R, Brennan CW, Mellinghoff IK, Holland EC, Gambhir SS. A brain tumor molecular imaging strategy using a new triple-modality MRI-photoacoustic-Raman nanoparticle. Nature Medicine. 18: 829-34. PMID 22504484 DOI: 10.1038/Nm.2721 |
0.033 |
|
| 2014 |
Chim H, Kircher MF, Spinner RJ, Bishop AT, Shin AY. Free functioning gracilis transfer for traumatic brachial plexus injuries in children Journal of Hand Surgery. 39: 1959-1966. PMID 25064624 DOI: 10.1016/j.jhsa.2014.06.020 |
0.033 |
|
| 2016 |
Neuschmelting V, Burton NC, Lockau H, Urich A, Harmsen S, Ntziachristos V, Kircher MF. Performance of a Multispectral Optoacoustic Tomography (MSOT) System equipped with 2D vs. 3D Handheld Probes for Potential Clinical Translation Photoacoustics. 4: 1-10. DOI: 10.1016/j.pacs.2015.12.001 |
0.033 |
|
| 2012 |
Huang R, Vider J, Kovar JL, Olive DM, Mellinghoff IK, Mayer-Kuckuk P, Kircher MF, Blasberg RG. Integrin αvβ3-targeted IRDye 800CW near-infrared imaging of glioblastoma. Clinical Cancer Research : An Official Journal of the American Association For Cancer Research. 18: 5731-40. PMID 22914772 DOI: 10.1158/1078-0432.CCR-12-0374 |
0.032 |
|
| 2009 |
Kircher M. Come together Scientist. 23: 58. |
0.031 |
|
| 2012 |
Anderson N, Gernaey KV, Jamison TF, Kircher M, Wiles C, Leadbeater NE, Sandford G, Richardson P. Ask the experts: the challenges and benefits of flow chemistry to optimize drug development. Future Medicinal Chemistry. 4: 1779-89. PMID 23043475 DOI: 10.4155/fmc.12.106 |
0.031 |
|
| 2012 |
Sammer DM, Kircher MF, Bishop AT, Spinner RJ, Shin AY. Hemi-contralateral C7 transfer in traumatic brachial plexus injuries: Outcomes and complications Journal of Bone and Joint Surgery - Series A. 94: 131-137. PMID 22257999 DOI: 10.2106/JBJS.J.01075 |
0.031 |
|
| 2014 |
Sapthavee A, Kircher ML, Akst LM. Plummer-Vinson syndrome following gastric bypass surgery. Ear, Nose, & Throat Journal. 93: E15-7. PMID 25255352 |
0.03 |
|
| 2003 |
Kircher M, Wirnitzer B. [The City Hospital of Munich Bogenhausen and Munich's recent placing of two different models of two assessments of case management]. Pflege Aktuell / Dbfk, Deutscher Berufsverband FüR Pflegeberufe. 57: 462-6. PMID 14621524 |
0.03 |
|
| 1998 |
Schmidt S, Kircher M, Kasala J, Locaj J. Near infrared spectroscopy in fermentation and quality control for amino acid production Bioprocess Engineering. 19: 67-70. DOI: 10.1007/s004490050484 |
0.029 |
|
| 2003 |
Kircher M, Wirnitzer B. The City Hospital of Munich Bogenhausen and Munich's recent placing of two different models of two assessments of case management | Die städtischen Krankenhäuser München Bogenhausen und München Neuperlach stellen zwei unterschiedliche Modelle vor. Zwei Ansätze für Case-Management Pflege Aktuell / Dbfk, Deutscher Berufsverband FüR Pflegeberufe. 57: 462-466. PMID 2003169598 |
0.029 |
|
| 2008 |
Kircher MF, Grimm J, Swirski FK, Libby P, Gerszten RE, Allport JR, Weissleder R. Noninvasive in vivo imaging of monocyte trafficking to atherosclerotic lesions. Circulation. 117: 388-95. PMID 18172031 DOI: 10.1161/Circulationaha.107.719765 |
0.028 |
|
| 2013 |
Kircher ML, Trenkle GB, Larouere MJ, Pieper DR. Imaging case of the month: Carotid artery dissection after exercise in stylo-carotid artery syndrome. Otology & Neurotology : Official Publication of the American Otological Society, American Neurotology Society [and] European Academy of Otology and Neurotology. 34: e36-7. PMID 23598696 DOI: 10.1097/MAO.0b013e318281e24e |
0.027 |
|
| 2007 |
Kircher M, Völter M. Guest editors' introduction: Software patterns Ieee Software. 24: 28-30. DOI: 10.1109/MS.2007.109 |
0.026 |
|
| 2011 |
Faugel H, Bobkov V, Braun F, Franke T, Hartmann DA, Kircher M, Noterdaeme JM, Siegl G. An improved method to measure the antenna resistance and radiated power of ICRF-antennas using current probes Fusion Engineering and Design. 86: 996-999. DOI: 10.1016/j.fusengdes.2011.02.092 |
0.025 |
|
| 2011 |
Rhee PC, Pirola E, Hebert-Blouin MN, Kircher MF, Spinner RJ, Bishop AT, Shin AY. Concomitant traumatic spinal cord and brachial plexus injuries in adult patients Journal of Bone and Joint Surgery - Series A. 93: 2271-2277. PMID 22258773 DOI: 10.2106/JBJS.J.00922 |
0.024 |
|
| 2010 |
Kovachevich R, Kircher MF, Wood CM, Spinner RJ, Bishop AT, Shin AY. Complications of intercostal nerve transfer for brachial plexus reconstruction Journal of Hand Surgery. 35: 1995-2000. PMID 21095076 DOI: 10.1016/j.jhsa.2010.09.013 |
0.023 |
|
| 1999 |
Kircher M, Huthmacher K. Amino acids enhance the nutritional value of feeds Agro Food Industry Hi-Tech. 10: 7-11. |
0.023 |
|
| 2013 |
De La Zerda A, Kircher MF, Jokerst JV, Zavaleta CL, Kempen PJ, Mittra E, Pitter K, Huang R, Campos C, Habte F, Sinclair R, Brennan CW, Mellinghoff IK, Holland EC, Gambhir SS. A brain tumor molecular imaging strategy using a new triple-modality MRI-photoacoustic-Raman nanoparticle Progress in Biomedical Optics and Imaging - Proceedings of Spie. 8581. DOI: 10.1117/12.2001719 |
0.023 |
|
| 2014 |
Chim H, Kircher MF, Spinner RJ, Bishop AT, Shin AY. Reconstruction of pediatric brachial plexus injuries with nerve grafts and nerve transfers Journal of Hand Surgery. 39: 1771-1778. PMID 25034788 DOI: 10.1016/j.jhsa.2014.05.034 |
0.023 |
|
| 2012 |
Lee JY, Kircher MF, Spinner RJ, Bishop AT, Shin AY. Factors affecting outcome of triceps motor branch transfer for isolated axillary nerve injury Journal of Hand Surgery. 37: 2350-2356. PMID 23044480 DOI: 10.1016/j.jhsa.2012.07.030 |
0.022 |
|
| 2013 |
Heinemann B, Fantz U, Franzen P, Froeschle M, Kircher M, Kraus W, Martens C, Nocentini R, Riedl R, Ruf B, Schiesko L, Wimmer C, Wuenderlich D. Negative ion test facility ELISE - Status and first results Fusion Engineering and Design. 88: 512-516. DOI: 10.1016/j.fusengdes.2012.11.003 |
0.021 |
|
| 2014 |
Brogan DM, Carofino BC, Kircher MF, Spinner RJ, Elhassan BT, Bishop AT, Shin AY. Prevalence of rotator cuff tears in adults with traumatic brachial plexus injuries. The Journal of Bone and Joint Surgery. American Volume. 96: e139. PMID 25143507 DOI: 10.2106/JBJS.L.00420 |
0.021 |
|
| 2014 |
Brogan DM, Carofino BC, Kircher MF, Spinner RJ, Elhassan BT, Bishop AT, Shin AY. Prevalence of rotator cuff tears in adults with traumatic brachial plexus injuries Journal of Bone and Joint Surgery - American Volume. 96: e139.1-e139.6. DOI: 10.2106/JBJS.L.00420 |
0.021 |
|
| 2014 |
Kircher M. The Emerging bioeconomy: Industrial drivers, global impact, and international strategies Industrial Biotechnology. 10: 11-18. DOI: 10.1089/ind.2014.1500 |
0.02 |
|
| 2014 |
Iacono P, Karabeber H, Kircher MF. A "schizophotonic" all-in-one nanoparticle coating for multiplexed SE(R)RS biomedical imaging. Angewandte Chemie (International Ed. in English). 53: 11756-61. PMID 25164141 DOI: 10.1002/anie.201403835 |
0.02 |
|
| 2014 |
Iacono P, Karabeber H, Kircher MF. A "schizophotonic" all-in-one nanoparticle coating for multiplexed SE(R)RS biomedical imaging Angewandte Chemie - International Edition. 53: 11756-11761. DOI: 10.1002/anie.201403835 |
0.02 |
|
| 2012 |
Leonetti JP, Kircher ML, Jaber JJ, Benscoter BJ, Marmora JJ, Feustel PJ. Inner ear effects of canal wall down mastoidectomy Otolaryngology - Head and Neck Surgery (United States). 146: 621-626. PMID 22203686 DOI: 10.1177/0194599811432103 |
0.02 |
|
| 1975 |
Schappert GT, Ladish JS, Leland WT, Kircher MJ. 18.11 Gain Recovery After Saturation in Short-Pulse CO2 Amplifiers Ieee Journal of Quantum Electronics. 11: 897-898. DOI: 10.1109/JQE.1975.1068905 |
0.019 |
|
| 2013 |
Carofino BC, Brogan DM, Kircher MF, Elhassan BT, Spinner RJ, Bishop AT, Shin AY. Iatrogenic nerve injuries during shoulder surgery Journal of Bone and Joint Surgery - Series A. 95: 1667-1674. PMID 24048554 DOI: 10.2106/JBJS.L.00238 |
0.019 |
|
| 2004 |
Kircher M, Hoffmann J, Roth A, Kampes B, Adam N, Neugebauer HJ. Application of permanent scatterers on mining-induced subsidence European Space Agency, (Special Publication) Esa Sp. 157-160. |
0.019 |
|
| 1989 |
Kircher MA. Competence, duration, and heart rate--factors that affect exercise The American Journal of Occupational Therapy. : Official Publication of the American Occupational Therapy Association. 43: 549-550. PMID 2774053 |
0.016 |
|
| 2011 |
Kircher M. The pharmaceutical industry needs more innovation in bioprocesses Future Medicinal Chemistry. 3: 1737-1740. PMID 22004081 DOI: 10.4155/fmc.11.124 |
0.013 |
|
| 2009 |
Schwanninger C, Kircher M. Patterns for product line engineering Proceedings of Europlop 2009 - 14th Annual European Conference On Pattern Languages of Programming. |
0.013 |
|
| 2001 |
Kircher MF, Kihiczak D, Rhea JT, Novelline RA. Safety of colon contrast material in (helical) CT examination of patients with suspected diverticulitis Emergency Radiology. 8: 94-98. |
0.012 |
|
| 2003 |
Zdun U, Voelter M, Kircher M. Design and implementation of an asynchronous invocation framework for web services Lecture Notes in Computer Science (Including Subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2853: 64-78. |
0.012 |
|
| 2001 |
Kircher M, Pfefferle W. The fermentative production of L-lysine as an animal feed additive. Chemosphere. 43: 27-31. PMID 11233822 DOI: 10.1016/S0045-6535(00)00320-9 |
0.011 |
|
| 2009 |
Jourquin C, Kircher M. Tackling the biotech talent shortfall Chemical Week. 171. |
0.011 |
|
| 2015 |
Kircher M. Sustainability of biofuels and renewable chemicals production from biomass. Current Opinion in Chemical Biology. 29: 26-31. PMID 26256682 DOI: 10.1016/j.cbpa.2015.07.010 |
0.01 |
|
| 2015 |
Kircher M. Editorial New Biotechnology. 32: 97-99. PMID 24548991 DOI: 10.1016/j.nbt.2014.02.003 |
0.01 |
|
| 2015 |
Kircher M. Sustainability of biofuels and renewable chemicals production from biomass Current Opinion in Chemical Biology. 29: 26-31. DOI: 10.1016/j.cbpa.2015.07.010 |
0.01 |
|
| 2014 |
Karabeber H, Huang R, Iacono P, Samii JM, Pitter K, Holland EC, Kircher MF. Guiding brain tumor resection using surface-enhanced Raman scattering nanoparticles and a hand-held Raman scanner Acs Nano. 8: 9755-9766. DOI: 10.1021/nn503948b |
0.01 |
|
| 2014 |
Zhang L, Wall MA, Harmsen S, Michael Drain C, Kircher MF. Determination on the structure of Au nanorods with pentagonal cross-sections by various TEM techniques Microscopy and Microanalysis. 20: 868-869. DOI: 10.1017/S1431927614006060 |
0.01 |
|
| 2013 |
Giuffre JL, Bishop AT, Spinner RJ, Kircher MF, Shin AY. In Reply Journal of Hand Surgery. 38: 620-621. PMID 23428195 DOI: 10.1016/j.jhsa.2013.01.039 |
0.01 |
|
| 2012 |
Kircher ML, Kartush JM. Pitfalls in intraoperative nerve monitoring during vestibular schwannoma surgery Neurosurgical Focus. 33. PMID 22937856 DOI: 10.3171/2012.7.FOCUS12196 |
0.01 |
|
| 2012 |
Kircher M. How to turn industrial biotechnology into reality New Biotechnology. 29: 243-247. PMID 22100431 DOI: 10.1016/j.nbt.2011.11.002 |
0.01 |
|
| 2012 |
Kircher M. The transition to a bio-economy: Emerging from the oil age Biofuels, Bioproducts and Biorefining. 6: 369-375. DOI: 10.1002/bbb.1352 |
0.01 |
|
| 2012 |
Kircher M. The transition to a bio-economy: National perspectives Biofuels, Bioproducts and Biorefining. 6: 240-245. DOI: 10.1002/bbb.1341 |
0.01 |
|
| 2011 |
Carlsen BT, Kircher MF, Spinner RJ, Bishop AT, Shin AY. Comparison of single versus double nerve transfers for elbow flexion after brachial plexus injury Plastic and Reconstructive Surgery. 127: 269-276. PMID 20871484 DOI: 10.1097/PRS.0b013e3181f95be7 |
0.01 |
|
| 2011 |
Kircher M. Biotechnology pushes greening the chemical industry: Biomass transformation the most relevant driver of industrial biotechnology; Clusters key in Germany, Europe Industrial Biotechnology. 7: 122-126. DOI: 10.1089/ind.2011.7.122 |
0.01 |
|
| 2010 |
Franssen MCR, Kircher M, Wohlgemuth R. Industrial Biotechnology in the Chemical and Pharmaceutical Industries Industrial Biotechnology: Sustainable Growth and Economic Success. 323-350. DOI: 10.1002/9783527630233.ch9 |
0.01 |
|
| 2009 |
Kircher M. Industrial biotechnology - Innovation for the chemical industry | Industrial biotechnology - Innovation für die chemische Indusrie Gummi, Fasern, Kunststoffe. 62: 46-48. |
0.01 |
|
| 2008 |
Kircher M, Terzenbach D. Strategies of the white biotechnology: 60 million euros for biotechnology cluster | Strategien der Weißen Biotechnologie: 60 Mio. Euro für Biotechnologie-Cluster Biospektrum. 14: 650. |
0.01 |
|
| 2006 |
Kircher ML, Dutton JM. Concurrent endoscopic sinus surgery and rhinoplasty. American Journal of Rhinology. 20: 485-8. PMID 17063743 DOI: 10.2500/ajr.2006.20.2933 |
0.01 |
|
| 2006 |
Kircher M. White biotechnology: ready to partner and invest in. Biotechnology Journal. 1: 787-94. PMID 16897821 DOI: 10.1002/biot.200600087 |
0.01 |
|
| 2004 |
Pham W, Kircher MF, Weissleder R, Tung CH. Enhancing membrane permeability by fatty acylation of oligoarginine peptides. Chembiochem : a European Journal of Chemical Biology. 5: 1148-51. PMID 15300843 DOI: 10.1002/Cbic.200400063 |
0.01 |
|
| 2004 |
Zdun U, Kircher M, Völter M. Remoting patterns: Design reuse of distributed object middleware solutions Ieee Internet Computing. 8: 60-66. DOI: 10.1109/MIC.2004.70 |
0.01 |
|
| 1997 |
Kircher M. Rural telemedicine may fail to fill pot-of-gold hopes. Telemedicine and Telehealth Networks : Newsmagazine of Distance Healthcare. 3: 28-30, 33. PMID 10166437 |
0.01 |
|
| 1996 |
Torpey BM, Pess GM, Kircher MT, Faierman E, Absatz MG. Ulnar nerve laceration in a closed both bone forearm fracture. Journal of Orthopaedic Trauma. 10: 131-4. PMID 8932674 |
0.01 |
|
| 1987 |
Tydings JD, Martino LJ, Kircher M, Alfred RH, Lozman J. Viability of intramedullary canal bone reamings for continued calcification The American Journal of Surgery. 153: 306-309. PMID 3548454 DOI: 10.1016/0002-9610(87)90613-1 |
0.01 |
|
| 1986 |
Tydings JD, Martino LJ, Kircher M, Alfred R, Lozman J. The osteoinductive potential of intramedullary canal bone reamings Current Surgery. 43: 121-124. PMID 3516583 |
0.01 |
|
| 1981 |
Comly JC, Leland WT, Elliott CJ, Hunter AM, Kircher MJ. Discharge and Kinetics Modeling in Electron-Beam Controlled CO2 Laser Amplifiers Ieee Journal of Quantum Electronics. 17: 1786-1799. DOI: 10.1109/JQE.1981.1071317 |
0.01 |
|
| 1975 |
Leland WT, Kircher MJ, Nutter MJ, Schappert GT. Rotational temperature in a high-pressure pulsed CO2 laser Journal of Applied Physics. 46: 2174-2176. DOI: 10.1063/1.321861 |
0.01 |
|
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