Josue Baeza - Publications

Affiliations: 
2017- University of Pennsylvania School of Medicine, Philadelphia, PA, United States 

14 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2024 Baeza J, Coons BE, Lin Z, Riley J, Mendoza M, Peranteau WH, Garcia BA. In utero pulse injection of isotopic amino acids quantifies protein turnover rates during murine fetal development. Cell Reports Methods. 4: 100713. PMID 38412836 DOI: 10.1016/j.crmeth.2024.100713  0.7
2023 Baeza J, Coons BE, Lin Z, Riley J, Mendoza M, Peranteau WH, Garcia BA. pulse injection of isotopic amino acids quantifies protein turnover rates during murine fetal development. Biorxiv : the Preprint Server For Biology. PMID 37293076 DOI: 10.1101/2023.05.18.541242  0.702
2021 Pino LK, Baeza J, Lauman R, Schilling B, Garcia BA. Improved SILAC Quantification with Data-Independent Acquisition to Investigate Bortezomib-Induced Protein Degradation. Journal of Proteome Research. PMID 33764077 DOI: 10.1021/acs.jproteome.0c00938  0.577
2021 Narapareddy L, Rhon-Calderon EA, Vrooman LA, Baeza J, Nguyen DK, Mesaros C, Lan Y, Garcia BA, Schultz RM, Bartolomei MS. Sex-specific effects of in vitro fertilization on adult metabolic outcomes and hepatic transcriptome and proteome in mouse. Faseb Journal : Official Publication of the Federation of American Societies For Experimental Biology. 35: e21523. PMID 33734487 DOI: 10.1096/fj.202002744R  0.385
2020 Baeza J, Lawton AJ, Fan J, Smallegan MJ, Lienert I, Gandhi T, Bernhardt OM, Reiter L, Denu JM. Revealing dynamic protein acetylation across subcellular compartments. Journal of Proteome Research. PMID 32290654 DOI: 10.1021/Acs.Jproteome.0C00088  0.479
2019 Agosto LM, Gazzara MR, Radens CM, Sidoli S, Baeza J, Garcia BA, Lynch KW. Deep profiling and custom databases improve detection of proteoforms generated by alternative splicing. Genome Research. PMID 31727681 DOI: 10.1101/Gr.248435.119  0.7
2019 Lan X, Khandros E, Huang P, Peslak SA, Bhardwaj SK, Grevet JD, Abdulmalik O, Wang H, Keller CA, Giardine B, Baeza J, Duffner ER, El Demerdash O, Wu XS, Vakoc CR, et al. The E3 ligase adaptor molecule SPOP regulates fetal hemoglobin levels in adult erythroid cells. Blood Advances. 3: 1586-1597. PMID 31126914 DOI: 10.1182/Bloodadvances.2019032318  0.581
2019 Lindahl AJ, Lawton AJ, Baeza J, Dowell JA, Denu JM. Site-Specific Lysine Acetylation Stoichiometry Across Subcellular Compartments. Methods in Molecular Biology (Clifton, N.J.). 1983: 79-106. PMID 31087294 DOI: 10.1007/978-1-4939-9434-2_6  0.52
2018 Latorre-Muro P, Baeza J, Armstrong EA, Hurtado-Guerrero R, Corzana F, Wu LE, Sinclair DA, López-Buesa P, Carrodeguas JA, Denu JM. Dynamic Acetylation of Phosphoenolpyruvate Carboxykinase Toggles Enzyme Activity between Gluconeogenic and Anaplerotic Reactions. Molecular Cell. 71: 718-732.e9. PMID 30193097 DOI: 10.1016/J.Molcel.2018.07.031  0.309
2016 Fan J, Baeza J, Denu JM. Investigating Histone Acetylation Stoichiometry and Turnover Rate. Methods in Enzymology. 574: 125-48. PMID 27423860 DOI: 10.1016/Bs.Mie.2016.01.007  0.349
2016 Baeza J, Smallegan MJ, Denu JM. Mechanisms and Dynamics of Protein Acetylation in Mitochondria. Trends in Biochemical Sciences. PMID 26822488 DOI: 10.1016/J.Tibs.2015.12.006  0.511
2015 Baeza J, Smallegan MJ, Denu JM. Site-specific reactivity of nonenzymatic lysine acetylation. Acs Chemical Biology. 10: 122-8. PMID 25555129 DOI: 10.1021/Cb500848P  0.434
2014 Baeza J, Dowell JA, Smallegan MJ, Fan J, Amador-Noguez D, Khan Z, Denu JM. Stoichiometry of site-specific lysine acetylation in an entire proteome. The Journal of Biological Chemistry. 289: 21326-38. PMID 24917678 DOI: 10.1074/Jbc.M114.581843  0.486
2013 Feldman JL, Baeza J, Denu JM. Activation of the protein deacetylase SIRT6 by long-chain fatty acids and widespread deacylation by mammalian sirtuins. The Journal of Biological Chemistry. 288: 31350-6. PMID 24052263 DOI: 10.1074/Jbc.C113.511261  0.37
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