| Year |
Citation |
Score |
| 2023 |
Bressin A, Jasnovidova O, Arnold M, Altendorfer E, Trajkovski F, Kratz TA, Handzlik JE, Hnisz D, Mayer A. High-sensitive nascent transcript sequencing reveals BRD4-specific control of widespread enhancer and target gene transcription. Nature Communications. 14: 4971. PMID 37591883 DOI: 10.1038/s41467-023-40633-y |
0.328 |
|
| 2023 |
Pipercevic J, Kohl B, Gerasimaite R, Comte-Miserez V, Hostachy S, Müntener T, Agustoni E, Jessen HJ, Fiedler D, Mayer A, Hiller S. Inositol pyrophosphates activate the vacuolar transport chaperone complex in yeast by disrupting a homotypic SPX domain interaction. Nature Communications. 14: 2645. PMID 37156835 DOI: 10.1038/s41467-023-38315-w |
0.318 |
|
| 2022 |
Altendorfer E, Mochalova Y, Mayer A. BRD4: a general regulator of transcription elongation. Transcription. 13: 70-81. PMID 36047906 DOI: 10.1080/21541264.2022.2108302 |
0.359 |
|
| 2022 |
Eischer N, Arnold M, Mayer A. Emerging roles of BET proteins in transcription and co-transcriptional RNA processing. Wiley Interdisciplinary Reviews. Rna. e1734. PMID 35491403 DOI: 10.1002/wrna.1734 |
0.425 |
|
| 2021 |
Jasnovidova O, Arnold M, Mayer A. Illuminating Enhancer Transcription at Nucleotide Resolution with Native Elongating Transcript Sequencing (NET-Seq). Methods in Molecular Biology (Clifton, N.J.). 2351: 41-65. PMID 34382183 DOI: 10.1007/978-1-0716-1597-3_3 |
0.378 |
|
| 2021 |
Arnold M, Bressin A, Jasnovidova O, Meierhofer D, Mayer A. A BRD4-mediated elongation control point primes transcribing RNA polymerase II for 3'-processing and termination. Molecular Cell. PMID 34324863 DOI: 10.1016/j.molcel.2021.06.026 |
0.444 |
|
| 2021 |
Gajos M, Jasnovidova O, van Bömmel A, Freier S, Vingron M, Mayer A. Conserved DNA sequence features underlie pervasive RNA polymerase pausing. Nucleic Acids Research. PMID 33788942 DOI: 10.1093/nar/gkab208 |
0.389 |
|
| 2017 |
Mayer A, Churchman LS. A Detailed Protocol for Subcellular RNA Sequencing (subRNA-seq). Current Protocols in Molecular Biology. 120: 4.29.1-4.29.18. PMID 28967997 DOI: 10.1002/cpmb.44 |
0.364 |
|
| 2017 |
Winter GE, Mayer A, Buckley DL, Erb MA, Roderick JE, Vittori S, Reyes JM, di Iulio J, Souza A, Ott CJ, Roberts JM, Zeid R, Scott TG, Paulk J, Lachance K, et al. BET Bromodomain Proteins Function as Master Transcription Elongation Factors Independent of CDK9 Recruitment. Molecular Cell. PMID 28673542 DOI: 10.1016/J.Molcel.2017.06.004 |
0.348 |
|
| 2017 |
Mayer A, Landry HM, Churchman LS. Pause & go: from the discovery of RNA polymerase pausing to its functional implications. Current Opinion in Cell Biology. 46: 72-80. PMID 28363125 DOI: 10.1016/j.ceb.2017.03.002 |
0.413 |
|
| 2016 |
Mayer A, Churchman LS. Genome-wide profiling of RNA polymerase transcription at nucleotide resolution in human cells with native elongating transcript sequencing. Nature Protocols. 11: 813-33. PMID 27010758 DOI: 10.1038/nprot.2016.047 |
0.411 |
|
| 2015 |
Mühlbacher W, Mayer A, Sun M, Remmert M, Cheung AC, Niesser J, Soeding J, Cramer P. Structure of Ctk3, a subunit of the RNA polymerase II CTD kinase complex, reveals a noncanonical CTD-interacting domain fold. Proteins. 83: 1849-58. PMID 26219431 DOI: 10.1002/prot.24869 |
0.604 |
|
| 2015 |
Mayer A, di Iulio J, Maleri S, Eser U, Vierstra J, Reynolds A, Sandstrom R, Stamatoyannopoulos JA, Churchman LS. Native elongating transcript sequencing reveals human transcriptional activity at nucleotide resolution. Cell. 161: 541-54. PMID 25910208 DOI: 10.1016/J.Cell.2015.03.010 |
0.383 |
|
| 2014 |
Hirschmann WD, Westendorf H, Mayer A, Cannarozzi G, Cramer P, Jansen RP. Scp160p is required for translational efficiency of codon-optimized mRNAs in yeast. Nucleic Acids Research. 42: 4043-55. PMID 24445806 DOI: 10.1093/nar/gkt1392 |
0.58 |
|
| 2013 |
Meinel DM, Burkert-Kautzsch C, Kieser A, O'Duibhir E, Siebert M, Mayer A, Cramer P, Söding J, Holstege FC, Sträßer K. Recruitment of TREX to the transcription machinery by its direct binding to the phospho-CTD of RNA polymerase II. Plos Genetics. 9: e1003914. PMID 24244187 DOI: 10.1371/journal.pgen.1003914 |
0.617 |
|
| 2013 |
Heo DH, Yoo I, Kong J, Lidschreiber M, Mayer A, Choi BY, Hahn Y, Cramer P, Buratowski S, Kim M. The RNA polymerase II C-terminal domain-interacting domain of yeast Nrd1 contributes to the choice of termination pathway and couples to RNA processing by the nuclear exosome. The Journal of Biological Chemistry. 288: 36676-90. PMID 24196955 DOI: 10.1074/Jbc.M113.508267 |
0.631 |
|
| 2012 |
Mayer A, Heidemann M, Lidschreiber M, Schreieck A, Sun M, Hintermair C, Kremmer E, Eick D, Cramer P. CTD tyrosine phosphorylation impairs termination factor recruitment to RNA polymerase II. Science (New York, N.Y.). 336: 1723-5. PMID 22745433 DOI: 10.1126/science.1219651 |
0.593 |
|
| 2012 |
Mayer A, Schreieck A, Lidschreiber M, Leike K, Martin DE, Cramer P. The spt5 C-terminal region recruits yeast 3' RNA cleavage factor I. Molecular and Cellular Biology. 32: 1321-31. PMID 22290438 DOI: 10.1128/MCB.06310-11 |
0.638 |
|
| 2011 |
Blattner C, Jennebach S, Herzog F, Mayer A, Cheung AC, Witte G, Lorenzen K, Hopfner KP, Heck AJ, Aebersold R, Cramer P. Molecular basis of Rrn3-regulated RNA polymerase I initiation and cell growth. Genes & Development. 25: 2093-105. PMID 21940764 DOI: 10.1101/Gad.17363311 |
0.59 |
|
| 2011 |
Müller M, Heym RG, Mayer A, Kramer K, Schmid M, Cramer P, Urlaub H, Jansen RP, Niessing D. A cytoplasmic complex mediates specific mRNA recognition and localization in yeast. Plos Biology. 9: e1000611. PMID 21526221 DOI: 10.1371/journal.pbio.1000611 |
0.582 |
|
| 2011 |
Miller C, Schwalb B, Maier K, Schulz D, Dümcke S, Zacher B, Mayer A, Sydow J, Marcinowski L, Dölken L, Martin DE, Tresch A, Cramer P. Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast. Molecular Systems Biology. 7: 458. PMID 21206491 DOI: 10.1038/msb.2010.112 |
0.438 |
|
| 2010 |
Clausing E, Mayer A, Chanarat S, Müller B, Germann SM, Cramer P, Lisby M, Strässer K. The transcription elongation factor Bur1-Bur2 interacts with replication protein A and maintains genome stability during replication stress. The Journal of Biological Chemistry. 285: 41665-74. PMID 21075850 DOI: 10.1074/jbc.M110.193292 |
0.461 |
|
| 2010 |
Sun M, Larivière L, Dengl S, Mayer A, Cramer P. A tandem SH2 domain in transcription elongation factor Spt6 binds the phosphorylated RNA polymerase II C-terminal repeat domain (CTD). The Journal of Biological Chemistry. 285: 41597-603. PMID 20926372 DOI: 10.1074/jbc.M110.144568 |
0.605 |
|
| 2010 |
Mayer A, Lidschreiber M, Siebert M, Leike K, Söding J, Cramer P. Uniform transitions of the general RNA polymerase II transcription complex. Nature Structural & Molecular Biology. 17: 1272-8. PMID 20818391 DOI: 10.1038/nsmb.1903 |
0.564 |
|
| 2009 |
Dengl S, Mayer A, Sun M, Cramer P. Structure and in vivo requirement of the yeast Spt6 SH2 domain. Journal of Molecular Biology. 389: 211-25. PMID 19371747 DOI: 10.1016/j.jmb.2009.04.016 |
0.562 |
|
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