| Year |
Citation |
Score |
| 2023 |
García-Marín AM, Cancino-Muñoz I, Torres-Puente M, Villamayor LM, Borrás R, Borrás-Máñez M, Bosque M, Camarena JJ, Colomer-Roig E, Colomina J, Escribano I, Esparcia-Rodríguez O, Gil-Brusola A, Gimeno C, Gimeno-Gascón A, ... ... Comas I, et al. Role of the first WHO mutation catalogue in the diagnosis of antibiotic resistance in Mycobacterium tuberculosis in the Valencia Region, Spain: a retrospective genomic analysis. The Lancet. Microbe. PMID 38061383 DOI: 10.1016/S2666-5247(23)00252-5 |
0.672 |
|
| 2023 |
López MG, Campos-Herrero MI, Torres-Puente M, Cañas F, Comín J, Copado R, Wintringer P, Iqbal Z, Lagarejos E, Moreno-Molina M, Pérez-Lago L, Pino B, Sante L, García de Viedma D, Samper S, ... Comas I, et al. Deciphering the Tangible Spatio-Temporal Spread of a 25-Year Tuberculosis Outbreak Boosted by Social Determinants. Microbiology Spectrum. e0282622. PMID 36786614 DOI: 10.1128/spectrum.02826-22 |
0.335 |
|
| 2023 |
Renau-Mínguez C, Herrero-Abadía P, Ruiz-Rodriguez P, Sentandreu V, Torrents E, Chiner-Oms Á, Torres-Puente M, Comas I, Julián E, Coscolla M. Genomic analysis of sustains its nonpathogenic and immunogenic phenotype. Frontiers in Microbiology. 13: 982679. PMID 36687580 DOI: 10.3389/fmicb.2022.982679 |
0.347 |
|
| 2022 |
Bordoy AE, Vallès X, Not A, Chiner-Oms Á, Saludes V, Torres Cervós J, Roset Roig A, Juan-Andres C, Sureda H, Pardo-Amil V, García I, Guitart Rossell G, Cambra Cibeira L, Casañ C, Giménez M, ... ... Comas I, et al. Epidemiological and Genomic Analysis of a Large SARS-CoV-2 Outbreak in a Long-Term Care Facility in Catalonia, Spain. Msphere. e0034622. PMID 36448779 DOI: 10.1128/msphere.00346-22 |
0.669 |
|
| 2022 |
Cancino-Muñoz I, López MG, Torres-Puente M, Villamayor LM, Borrás R, Borrás-Máñez M, Bosque M, Camarena JJ, Colijn C, Colomer-Roig E, Colomina J, Escribano I, Esparcia-Rodríguez O, García-García F, Gil-Brusola A, ... ... Comas I, et al. Population-based sequencing of reveals how current population dynamics are shaped by past epidemics. Elife. 11. PMID 35880398 DOI: 10.7554/eLife.76605 |
0.314 |
|
| 2022 |
Torres I, Giménez E, Albert E, Zulaica J, Álvarez-Rodríguez B, Burgos JS, Peiró S, Limón R, Vanaclocha H, Rodado C, Botija P, Sifre A, Tur B, Lozano RA, Orosa I, ... ... Comas I, et al. SARS-CoV-2 Omicron BA.1 variant breakthrough infections in nursing home residents after an homologous third dose of the Comirnaty® COVID-19 vaccine: Looking for correlates of protection. Journal of Medical Virology. PMID 35585782 DOI: 10.1002/jmv.27867 |
0.585 |
|
| 2022 |
Torres I, Bellido-Blasco JB, Gimeno C, Burgos JS, Albert E, Moya-Malo R, Gascó-Laborda JC, Tornero A, Soriano J, Meseguer-Ferrer N, Martínez-Serrano M, Ortíz-Rambla J, Buj H, Hernández N, Peiró S, ... ... Comas I, et al. SARS-CoV-2 Delta-variant breakthrough infections in nursing home residents at midterm after Comirnaty® COVID-19 vaccination. Journal of Medical Virology. PMID 35445415 DOI: 10.1002/jmv.27799 |
0.597 |
|
| 2022 |
Rodríguez-Grande C, Alcalá L, Estévez A, Sola-Campoy PJ, Buenestado-Serrano S, Martínez-Laperche C, Manuel de la Cueva V, Alonso R, Andrés-Zayas C, Adán-Jiménez J, Losada C, Rico-Luna C, Comas I, González-Candelas F, Catalán P, et al. Systematic Genomic and Clinical Analysis of Severe Acute Respiratory Syndrome Coronavirus 2 Reinfections and Recurrences Involving the Same Strain. Emerging Infectious Diseases. 28: 85-94. PMID 34843661 DOI: 10.3201/eid2801.211952 |
0.667 |
|
| 2021 |
López-Causapé C, Fraile-Ribot PA, Jiménez-Serrano S, Cabot G, Del Barrio-Tofiño E, Prado MC, Linares JM, López A, Hurtado A, Riera E, Serra A, Roselló E, Carbó L, Fernández-Baca MV, Gallegos C, ... ... Comas I, et al. A Genomic Snapshot of the SARS-CoV-2 Pandemic in the Balearic Islands. Frontiers in Microbiology. 12: 803827. PMID 35095814 DOI: 10.3389/fmicb.2021.803827 |
0.671 |
|
| 2021 |
Ruiz-Rodriguez P, Francés-Gómez C, Chiner-Oms Á, López MG, Jiménez-Serrano S, Cancino-Muñoz I, Ruiz-Hueso P, Torres-Puente M, Bracho MA, D'Auria G, Martinez-Priego L, Guerreiro M, Montero-Alonso M, Gómez MD, Piñana JL, ... ... Comas I, et al. Evolutionary and Phenotypic Characterization of Two Spike Mutations in European Lineage 20E of SARS-CoV-2. Mbio. e0231521. PMID 34781748 DOI: 10.1128/mBio.02315-21 |
0.646 |
|
| 2021 |
López MG, Chiner-Oms Á, García de Viedma D, Ruiz-Rodriguez P, Bracho MA, Cancino-Muñoz I, D'Auria G, de Marco G, García-González N, Goig GA, Gómez-Navarro I, Jiménez-Serrano S, Martinez-Priego L, Ruiz-Hueso P, Ruiz-Roldán L, ... ... Comas I, et al. The first wave of the COVID-19 epidemic in Spain was associated with early introductions and fast spread of a dominating genetic variant. Nature Genetics. PMID 34594042 DOI: 10.1038/s41588-021-00936-6 |
0.642 |
|
| 2021 |
Pérez Lago L, Pérez Latorre L, Herranz M, Tejerina F, Sola-Campoy PJ, Sicilia J, Suárez-González J, Andrés-Zayas C, Chiner-Oms A, Jiménez-Serrano S, García-González N, Comas I, González-Candelas F, Martínez-Laperche C, Catalán P, et al. Complete Analysis of the Epidemiological Scenario around a SARS-CoV-2 Reinfection: Previous Infection Events and Subsequent Transmission. Msphere. e0059621. PMID 34494886 DOI: 10.1128/mSphere.00596-21 |
0.664 |
|
| 2021 |
Pérez-Lago L, Aldámiz-Echevarría T, García-Martínez R, Pérez-Latorre L, Herranz M, Sola-Campoy PJ, Suárez-González J, Martínez-Laperche C, Comas I, González-Candelas F, Catalán P, Muñoz P, García de Viedma D, On Behalf Of Gregorio Marañón Microbiology-Id Covid Study Group. Different Within-Host Viral Evolution Dynamics in Severely Immunosuppressed Cases with Persistent SARS-CoV-2. Biomedicines. 9. PMID 34356872 DOI: 10.3390/biomedicines9070808 |
0.645 |
|
| 2021 |
Pérez-Lago L, Martínez-Lozano H, Pajares-Díaz JA, Díaz-Gómez A, Machado M, Sola-Campoy PJ, Herranz M, Valerio M, Olmedo M, Suárez-González J, Quesada-Cubo V, Gómez-Ruiz MDM, López-Fresneña N, Sánchez-Arcilla I, Comas I, et al. Overlapping of Independent SARS-CoV-2 Nosocomial Transmissions in a Complex Outbreak. Msphere. e0038921. PMID 34346709 DOI: 10.1128/mSphere.00389-21 |
0.667 |
|
| 2021 |
Moreno-Molina M, Shubladze N, Khurtsilava I, Avaliani Z, Bablishvili N, Torres-Puente M, Villamayor L, Gabrielian A, Rosenthal A, Vilaplana C, Gagneux S, Kempker RR, Vashakidze S, Comas I. Genomic analyses of Mycobacterium tuberculosis from human lung resections reveal a high frequency of polyclonal infections. Nature Communications. 12: 2716. PMID 33976135 DOI: 10.1038/s41467-021-22705-z |
0.322 |
|
| 2020 |
Goig GA, Cancino-Muñoz I, Torres-Puente M, Villamayor LM, Navarro D, Borrás R, Comas I. Whole-genome sequencing of Mycobacterium tuberculosis directly from clinical samples for high-resolution genomic epidemiology and drug resistance surveillance: an observational study. The Lancet. Microbe. 1: e175-e183. PMID 35544271 DOI: 10.1016/S2666-5247(20)30060-4 |
0.33 |
|
| 2020 |
Liu Q, Wei J, Li Y, Wang M, Su J, Lu Y, López MG, Qian X, Zhu Z, Wang H, Gan M, Jiang Q, Fu YX, Takiff HE, Comas I, et al. clinical isolates carry mutational signatures of host immune environments. Science Advances. 6: eaba4901. PMID 32524000 DOI: 10.1126/Sciadv.Aba4901 |
0.374 |
|
| 2020 |
Sousa J, Cá B, Maceiras AR, Simões-Costa L, Fonseca KL, Fernandes AI, Ramos A, Carvalho T, Barros L, Magalhães C, Chiner-Oms Á, Machado H, Veiga MI, Singh A, Pereira R, ... ... Comas I, et al. Mycobacterium tuberculosis associated with severe tuberculosis evades cytosolic surveillance systems and modulates IL-1β production. Nature Communications. 11: 1949. PMID 32327653 DOI: 10.1038/S41467-020-15832-6 |
0.348 |
|
| 2020 |
Goig GA, Blanco S, Garcia-Basteiro AL, Comas I. Contaminant DNA in bacterial sequencing experiments is a major source of false genetic variability. Bmc Biology. 18: 24. PMID 32122347 DOI: 10.1186/S12915-020-0748-Z |
0.373 |
|
| 2020 |
Comas I, Cancino-Muñoz I, Mariner-Llicer C, Goig GA, Ruiz-Hueso P, Francés-Cuesta C, García-González N, González-Candelas F. Use of next generation sequencing technologies for the diagnosis and epidemiology of infectious diseases. Enfermedades Infecciosas Y Microbiologia Clinica. 38: 32-38. PMID 32111363 DOI: 10.1016/J.Eimc.2020.02.006 |
0.679 |
|
| 2020 |
Castañeda-García A, Martín-Blecua I, Cebrián-Sastre E, Chiner-Oms Á, Torres-Puente M, Comas I, Blázquez J. Specificity and mutagenesis bias of the mycobacterial alternative mismatch repair analyzed by mutation accumulation studies Science Advances. 6. PMID 32095527 DOI: 10.1126/Sciadv.Aay4453 |
0.384 |
|
| 2020 |
Ezewudo M, Borens A, Chiner-Oms Á, Miotto P, Chindelevitch L, Starks AM, Hanna D, Liwski R, Zignol M, Gilpin C, Niemann S, Kohl TA, Warren RM, Crook D, Gagneux S, ... ... Comas I, et al. Author Correction: Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase. Scientific Reports. 10: 3531. PMID 32081980 DOI: 10.1038/S41598-020-58955-Y |
0.397 |
|
| 2020 |
Abascal E, Herranz M, Acosta F, Agapito J, Cabibbe AM, Monteserin J, Ruiz Serrano MJ, Gijón P, Fernández-González F, Lozano N, Chiner-Oms Á, Cáceres T, Pintado PG, Acín E, Valencia E, ... ... Comas I, et al. Screening of inmates transferred to Spain reveals a Peruvian prison as a reservoir of persistent Mycobacterium tuberculosis MDR strains and mixed infections. Scientific Reports. 10: 2704. PMID 32066749 DOI: 10.1038/S41598-020-59373-W |
0.359 |
|
| 2019 |
Zenteno-Cuevas R, Fernandez E, Viveros D, Madrazo-Moya CF, Cancino-Muñoz I, Comas I, Gonzalez-Covarrubias V, Barbosa-Amezcua M, Cuevas-Cordoba B. Characterization of Polymorphisms Associated with Multidrug-Resistant Tuberculosis by Whole Genomic Sequencing: A Preliminary Report from Mexico. Microbial Drug Resistance (Larchmont, N.Y.). PMID 31874045 DOI: 10.1089/Mdr.2019.0054 |
0.358 |
|
| 2019 |
Xu Y, Cancino-Muñoz I, Torres-Puente M, Villamayor LM, Borrás R, Borrás-Máñez M, Bosque M, Camarena JJ, Colomer-Roig E, Colomina J, Escribano I, Esparcia-Rodríguez O, Gil-Brusola A, Gimeno C, Gimeno-Gascón A, ... ... Comas I, et al. High-resolution mapping of tuberculosis transmission: Whole genome sequencing and phylogenetic modelling of a cohort from Valencia Region, Spain. Plos Medicine. 16: e1002961. PMID 31671150 DOI: 10.1371/Journal.Pmed.1002961 |
0.4 |
|
| 2019 |
Cancino-Muñoz I, Gil-Brusola A, Torres-Puente M, Mariner-Llicer C, Dogba J, Akinseye V, Adesokan K, Kwaghe A, Ejeh F, Cadmus S, Comas I. Development and application of affordable SNP typing approaches to genotype Mycobacterium tuberculosis complex strains in low and high burden countries. Scientific Reports. 9: 15343. PMID 31653874 DOI: 10.1038/S41598-019-51326-2 |
0.37 |
|
| 2019 |
Gomez-Valero L, Chiner-Oms A, Comas I, Buchrieser C. Evolutionary Dissection of the Dot/Icm System Based on Comparative Genomics of 58 Legionella Species. Genome Biology and Evolution. 11: 2619-2632. PMID 31504472 DOI: 10.1093/Gbe/Evz186 |
0.31 |
|
| 2019 |
Chiner-Oms Á, Berney M, Boinett C, González-Candelas F, Young DB, Gagneux S, Jacobs WR, Parkhill J, Cortes T, Comas I. Genome-wide mutational biases fuel transcriptional diversity in the Mycobacterium tuberculosis complex. Nature Communications. 10: 3994. PMID 31488832 DOI: 10.1038/S41467-019-11948-6 |
0.696 |
|
| 2019 |
Chiner-Oms Á, Sánchez-Busó L, Corander J, Gagneux S, Harris SR, Young D, González-Candelas F, Comas I. Genomic determinants of speciation and spread of the complex. Science Advances. 5: eaaw3307. PMID 31448322 DOI: 10.1126/Sciadv.Aaw3307 |
0.718 |
|
| 2019 |
Meehan CJ, Goig GA, Kohl TA, Verboven L, Dippenaar A, Ezewudo M, Farhat MR, Guthrie JL, Laukens K, Miotto P, Ofori-Anyinam B, Dreyer V, Supply P, Suresh A, Utpatel C, ... ... Comas I, et al. Whole genome sequencing of Mycobacterium tuberculosis: current standards and open issues. Nature Reviews. Microbiology. PMID 31209399 DOI: 10.1038/S41579-019-0214-5 |
0.408 |
|
| 2019 |
Madrazo-Moya CF, Cancino-Muñoz I, Cuevas-Córdoba B, González-Covarrubias V, Barbosa-Amezcua M, Soberón X, Muñiz-Salazar R, Martínez-Guarneros A, Bäcker C, Zarrabal-Meza J, Sampieri-Ramirez C, Enciso-Moreno A, Lauzardo M, Comas I, Zenteno-Cuevas R. Whole genomic sequencing as a tool for diagnosis of drug and multidrug-resistance tuberculosis in an endemic region in Mexico. Plos One. 14: e0213046. PMID 31166945 DOI: 10.1371/Journal.Pone.0213046 |
0.382 |
|
| 2019 |
Cancino-Muñoz I, Moreno-Molina M, Furió V, Goig GA, Torres-Puente M, Chiner-Oms Á, Villamayor LM, Sanz F, Guna-Serrano MR, Comas I. Cryptic resistance mutations associated to misdiagnoses of Multidrug-resistant tuberculosis. The Journal of Infectious Diseases. PMID 30875421 DOI: 10.1093/Infdis/Jiz104 |
0.399 |
|
| 2019 |
Chiner-Oms Á, Comas I. Large genomics datasets shed light on the evolution of the Mycobacterium tuberculosis complex. Infection, Genetics and Evolution : Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases. PMID 30822550 DOI: 10.1016/J.Meegid.2019.02.028 |
0.487 |
|
| 2019 |
Moreno-Molina M, Comas I, Furió V. The Future of TB Resistance Diagnosis: The Essentials on Whole Genome Sequencing and Rapid Testing Methods. Archivos De Bronconeumologia. PMID 30795867 DOI: 10.1016/J.Arbres.2019.01.002 |
0.407 |
|
| 2019 |
Domínguez J, Acosta F, Pérez-Lago L, Sambrano D, Batista V, De La Guardia C, Abascal E, Chiner-Oms Á, Comas I, González P, Bravo J, Del Cid P, Rosas S, Muñoz P, Goodridge A, et al. Simplified Model to Survey Tuberculosis Transmission in Countries Without Systematic Molecular Epidemiology Programs. Emerging Infectious Diseases. 25: 507-514. PMID 30789134 DOI: 10.3201/Eid2503.181593 |
0.393 |
|
| 2019 |
Abascal E, Pérez-Lago L, Martínez-Lirola M, Chiner-Oms Á, Herranz M, Chaoui I, Comas I, El Messaoudi MD, Cárdenas JAG, Santantón S, Bouza E, García-de-Viedma D. Whole genome sequencing-based analysis of tuberculosis (TB) in migrants: rapid tools for cross-border surveillance and to distinguish between recent transmission in the host country and new importations. Euro Surveillance : Bulletin Europeen Sur Les Maladies Transmissibles = European Communicable Disease Bulletin. 24. PMID 30696526 DOI: 10.2807/1560-7917.Es.2019.24.4.1800005 |
0.421 |
|
| 2019 |
Comas I, Cancino-Muñoz I, Goig GA, Chiner-Oms Á, López MG, Torres-Puente M, Moreno-Molina MÁ, Villamayor LM, Furió V. GENOMIC EPIDEMIOLOGY OF TUBERCULOSIS: FROM WITHIN HOST EVOLUTION TO GLOBAL MIGRATION PATTERNS Russian Journal of Infection and Immunity. 8: 566. DOI: 10.15789/2220-7619-2018-4-6.10 |
0.407 |
|
| 2018 |
Liu Q, Ma A, Wei L, Pang Y, Wu B, Luo T, Zhou Y, Zheng HX, Jiang Q, Gan M, Zuo T, Liu M, Yang C, Jin L, Comas I, et al. China's tuberculosis epidemic stems from historical expansion of four strains of Mycobacterium tuberculosis. Nature Ecology & Evolution. PMID 30397300 DOI: 10.1038/S41559-018-0680-6 |
0.393 |
|
| 2018 |
Ezewudo M, Borens A, Chiner-Oms Á, Miotto P, Chindelevitch L, Starks AM, Hanna D, Liwski R, Zignol M, Gilpin C, Niemann S, Kohl TA, Warren RM, Crook D, Gagneux S, ... ... Comas I, et al. Integrating standardized whole genome sequence analysis with a global Mycobacterium tuberculosis antibiotic resistance knowledgebase. Scientific Reports. 8: 15382. PMID 30337678 DOI: 10.1038/S41598-018-33731-1 |
0.423 |
|
| 2018 |
Allix-Béguec C, Arandjelovic I, Bi L, Beckert P, Bonnet M, Bradley P, Cabibbe AM, Cancino-Muñoz I, Caulfield MJ, Chaiprasert A, Cirillo DM, Clifton DA, Comas I, Crook DW, et al. Prediction of Susceptibility to First-Line Tuberculosis Drugs by DNA Sequencing. The New England Journal of Medicine. 379: 1403-1415. PMID 30280646 DOI: 10.1056/Nejmoa1800474 |
0.308 |
|
| 2018 |
Castejon M, Menéndez MC, Comas I, Vicente A, Garcia MJ. Whole-genome sequence analysis of the Mycobacterium avium complex and proposal of the transfer of Mycobacterium yongonense to Mycobacterium intracellulare subsp. yongonense subsp. nov. International Journal of Systematic and Evolutionary Microbiology. PMID 29683417 DOI: 10.1099/Ijsem.0.002767 |
0.479 |
|
| 2018 |
Chiner-Oms Á, González-Candelas F, Comas I. Gene expression models based on a reference laboratory strain are poor predictors of Mycobacterium tuberculosis complex transcriptional diversity. Scientific Reports. 8: 3813. PMID 29491462 DOI: 10.1038/S41598-018-22237-5 |
0.692 |
|
| 2017 |
Herranz M, Pole I, Ozere I, Chiner-Oms Á, Martínez-Lirola M, Pérez-García F, Gijón P, Serrano MJR, Romero LC, Cuevas O, Comas I, Bouza E, Pérez-Lago L, García-de-Viedma D. Mycobacterium tuberculosis Acquires Limited Genetic Diversity in Prolonged Infections, Reactivations and Transmissions Involving Multiple Hosts. Frontiers in Microbiology. 8: 2661. PMID 29403447 DOI: 10.3389/Fmicb.2017.02661 |
0.359 |
|
| 2017 |
Bastos HN, Osório NS, Gagneux S, Comas I, Saraiva M. The Troika Host-Pathogen-Extrinsic Factors in Tuberculosis: Modulating Inflammation and Clinical Outcomes. Frontiers in Immunology. 8: 1948. PMID 29375571 DOI: 10.3389/Fimmu.2017.01948 |
0.336 |
|
| 2017 |
Miotto P, Tessema B, Tagliani E, Chindelevitch L, Starks AM, Emerson C, Hanna D, Kim PS, Liwski R, Zignol M, Gilpin C, Niemann S, Denkinger CM, Fleming J, Warren RM, ... ... Comas I, et al. A standardised method for interpreting the association between mutations and phenotypic drug resistance in Mycobacterium tuberculosis. The European Respiratory Journal. 50. PMID 29284687 DOI: 10.1183/13993003.01354-2017 |
0.365 |
|
| 2017 |
Comas I. Genomic Epidemiology of Tuberculosis. Advances in Experimental Medicine and Biology. 1019: 79-93. PMID 29116630 DOI: 10.1007/978-3-319-64371-7_4 |
0.425 |
|
| 2017 |
Navarro Y, Pérez-Lago L, Herranz M, Sierra O, Comas I, Sicilia J, Bouza E, García de Viedma D. In-Depth Characterization and Functional Analysis of Clonal Variants in a Mycobacterium tuberculosis Strain Prone to Microevolution. Frontiers in Microbiology. 8: 694. PMID 28484440 DOI: 10.3389/Fmicb.2017.00694 |
0.431 |
|
| 2016 |
Coppola M, van Meijgaarden KE, Franken KL, Commandeur S, Dolganov G, Kramnik I, Schoolnik GK, Comas I, Lund O, Prins C, van den Eeden SJ, Korsvold GE, Oftung F, Geluk A, Ottenhoff TH. New Genome-Wide Algorithm Identifies Novel In-Vivo Expressed Mycobacterium Tuberculosis Antigens Inducing Human T-Cell Responses with Classical and Unconventional Cytokine Profiles. Scientific Reports. 6: 37793. PMID 27892960 DOI: 10.1038/Srep37793 |
0.367 |
|
| 2016 |
Stucki D, Brites D, Jeljeli L, Coscolla M, Liu Q, Trauner A, Fenner L, Rutaihwa L, Borrell S, Luo T, Gao Q, Kato-Maeda M, Ballif M, Egger M, Macedo R, ... ... Comas I, et al. Mycobacterium tuberculosis lineage 4 comprises globally distributed and geographically restricted sublineages. Nature Genetics. PMID 27798628 DOI: 10.1038/Ng.3704 |
0.398 |
|
| 2016 |
Pérez-Lago L, Izco S, Herranz M, Tudó G, Carcelén M, Comas I, Sierra O, González J, Ruiz-Serrano MJ, Eyene J, Bouza E, García-de-Viedma D. A novel strategy based on genomics and specific PCR reveals how a multidrug resistant Mycobacterium tuberculosis strain became prevalent in Equatorial Guinea 15 years after its emergence. Clinical Microbiology and Infection : the Official Publication of the European Society of Clinical Microbiology and Infectious Diseases. PMID 27746398 DOI: 10.1016/J.Cmi.2016.10.006 |
0.39 |
|
| 2016 |
Pérez-Lago L, Martínez-Lirola M, García S, Herranz M, Mokrousov I, Comas I, Martínez L, Bouza E, García de Viedma D. Urgent implementation in a hospital setting of a strategy to rule out secondary cases caused by imported XDR tuberculosis at diagnosis. Journal of Clinical Microbiology. PMID 27682128 DOI: 10.1128/Jcm.01718-16 |
0.411 |
|
| 2016 |
Comas I, Gil A. [Next generation sequencing for the diagnostics and epidemiology of tuberculosis]. Enfermedades Infecciosas Y Microbiología ClíNica. 34: 32-9. PMID 27474245 DOI: 10.1016/S0213-005X(16)30217-8 |
0.394 |
|
| 2016 |
Pérez-Lago L, Rodríguez Borlado AI, Comas I, Herranz M, Ruiz-Serrano MJ, Bouza E, García-de-Viedma D. Subtle genotypic changes can be observed soon after diagnosis in Mycobacterium tuberculosis infection. International Journal of Medical Microbiology : Ijmm. PMID 27247102 DOI: 10.1016/J.Ijmm.2016.05.007 |
0.341 |
|
| 2016 |
D'Auria G, Torrents E, Luquin M, Comas I, Julián E. Draft Genome Sequence of Mycobacterium brumae ATCC 51384. Genome Announcements. 4. PMID 27125480 DOI: 10.1128/Genomea.00237-16 |
0.418 |
|
| 2016 |
Comas I. Legionella effectors reflect strength in diversity. Nature Genetics. 48: 115-6. PMID 26813764 DOI: 10.1038/Ng.3492 |
0.347 |
|
| 2015 |
Pérez-Lago L, Herranz M, Comas I, Ruiz-Serrano MJ, López Roa P, Bouza E, García-de-Viedma D. Ultra-fast assessment of the presence of a high-risk Mycobacterium tuberculosis strain in a population. Journal of Clinical Microbiology. PMID 26719445 DOI: 10.1128/Jcm.02851-15 |
0.394 |
|
| 2015 |
Comas I, Hailu E, Kiros T, Bekele S, Mekonnen W, Gumi B, Tschopp R, Ameni G, Hewinson RG, Robertson BD, Goig GA, Stucki D, Gagneux S, Aseffa A, Young D, et al. Population Genomics of Mycobacterium tuberculosis in Ethiopia Contradicts the Virgin Soil Hypothesis for Human Tuberculosis in Sub-Saharan Africa. Current Biology : Cb. 25: 3260-6. PMID 26687624 DOI: 10.1016/J.Cub.2015.10.061 |
0.381 |
|
| 2015 |
Pérez-Lago L, Navarro Y, Montilla P, Comas I, Herranz M, Rodríguez-Gallego C, Ruiz Serrano MJ, Bouza E, García de Viedma D. Persistent Infection by a Mycobacterium tuberculosis Strain That Was Theorized To Have Advantageous Properties, as It Was Responsible for a Massive Outbreak. Journal of Clinical Microbiology. 53: 3423-9. PMID 26269618 DOI: 10.1128/Jcm.01405-15 |
0.391 |
|
| 2015 |
Luo T, Comas I, Luo D, Lu B, Wu J, Wei L, Yang C, Liu Q, Gan M, Sun G, Shen X, Liu F, Gagneux S, Mei J, Lan R, et al. Southern East Asian origin and coexpansion of Mycobacterium tuberculosis Beijing family with Han Chinese. Proceedings of the National Academy of Sciences of the United States of America. 112: 8136-41. PMID 26080405 DOI: 10.1073/Pnas.1424063112 |
0.386 |
|
| 2015 |
Young DB, Comas I, de Carvalho LP. Phylogenetic analysis of vitamin B12-related metabolism in Mycobacterium tuberculosis. Frontiers in Molecular Biosciences. 2: 6. PMID 25988174 DOI: 10.3389/Fmolb.2015.00006 |
0.433 |
|
| 2015 |
Rech G, Vilaplana C, Velasco J, Pluvinet R, Santín S, Prat C, Julián E, Alcaide F, Comas I, Sumoy L, Cardona PJ. Draft Genome Sequences of Mycobacterium setense Type Strain DSM-45070 and the Nonpathogenic Strain Manresensis, Isolated from the Bank of the Cardener River in Manresa, Catalonia, Spain. Genome Announcements. 3. PMID 25657273 DOI: 10.1128/Genomea.01485-14 |
0.387 |
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| 2015 |
Pérez-Lago L, Martínez Lirola M, Herranz M, Comas I, Bouza E, García-de-Viedma D. Fast and low-cost decentralized surveillance of transmission of tuberculosis based on strain-specific PCRs tailored from whole genome sequencing data: a pilot study. Clinical Microbiology and Infection : the Official Publication of the European Society of Clinical Microbiology and Infectious Diseases. 21: 249.e1-9. PMID 25614157 DOI: 10.1016/J.Cmi.2014.10.003 |
0.402 |
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| 2014 |
González-Candelas F, Alma Bracho M, Comas I, d'Auria G, D Unková M, GarcÃa R, Gosalbes MJ, Isaac S, Latorre A, López-Labrador FX, Patiño Galindo JÃ, Palero F, Pérez-Brocal V, Pérez-Cobas AE, Sánchez-Busó L, et al. [Molecular epidemiology studies on the immigrant population in Spain]. Revista Espaã±Ola De Salud PãºBlica. 88: 819-28. PMID 25418571 DOI: 10.4321/S1135-57272014000600013 |
0.727 |
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| 2014 |
Sánchez-Busó L, Comas I, Jorques G, González-Candelas F. Recombination drives genome evolution in outbreak-related Legionella pneumophila isolates. Nature Genetics. 46: 1205-11. PMID 25282102 DOI: 10.1038/Ng.3114 |
0.714 |
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| 2014 |
Bos KI, Harkins KM, Herbig A, Coscolla M, Weber N, Comas I, Forrest SA, Bryant JM, Harris SR, Schuenemann VJ, Campbell TJ, Majander K, Wilbur AK, Guichon RA, Wolfe Steadman DL, et al. Pre-Columbian mycobacterial genomes reveal seals as a source of New World human tuberculosis. Nature. 514: 494-7. PMID 25141181 DOI: 10.1038/Nature13591 |
0.405 |
|
| 2014 |
Köser CU, Comas I, Feuerriegel S, Niemann S, Gagneux S, Peacock SJ. Genetic diversity within Mycobacterium tuberculosis complex impacts on the accuracy of genotypic pyrazinamide drug-susceptibility assay. Tuberculosis (Edinburgh, Scotland). 94: 451-3. PMID 24870943 DOI: 10.1016/J.Tube.2014.04.002 |
0.399 |
|
| 2014 |
Köser CU, Bryant JM, Comas I, Feuerriegel S, Niemann S, Gagneux S, Parkhill J, Peacock SJ. Comment on: characterization of the embB gene in Mycobacterium tuberculosis isolates from Barcelona and rapid detection of main mutations related to ethambutol resistance using a low-density DNA array. The Journal of Antimicrobial Chemotherapy. 69: 2298-9. PMID 24752956 DOI: 10.1093/Jac/Dku101 |
0.395 |
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| 2014 |
Asante-Poku A, Nyaho MS, Borrell S, Comas I, Gagneux S, Yeboah-Manu D. Evaluation of customised lineage-specific sets of MIRU-VNTR loci for genotyping Mycobacterium tuberculosis complex isolates in Ghana. Plos One. 9: e92675. PMID 24667333 DOI: 10.1371/Journal.Pone.0092675 |
0.332 |
|
| 2014 |
Pérez-Lago L, Comas I, Navarro Y, González-Candelas F, Herranz M, Bouza E, García-de-Viedma D. Whole genome sequencing analysis of intrapatient microevolution in Mycobacterium tuberculosis: potential impact on the inference of tuberculosis transmission. The Journal of Infectious Diseases. 209: 98-108. PMID 23945373 DOI: 10.1093/Infdis/Jit439 |
0.712 |
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| 2014 |
Cortes T, Schubert O, Rose G, Arnvig K, Comas I, Aebersold R, Young D. Genome-wide Mapping of Transcriptional Start Sites Defines an Extensive Leaderless Transcriptome in. Cell Reports. 6: 415-415. DOI: 10.1016/J.Celrep.2014.01.004 |
0.31 |
|
| 2013 |
Cortes T, Schubert OT, Rose G, Arnvig KB, Comas I, Aebersold R, Young DB. Genome-wide mapping of transcriptional start sites defines an extensive leaderless transcriptome in Mycobacterium tuberculosis. Cell Reports. 5: 1121-31. PMID 24268774 DOI: 10.1016/J.Celrep.2013.10.031 |
0.37 |
|
| 2013 |
Rose G, Cortes T, Comas I, Coscolla M, Gagneux S, Young DB. Mapping of genotype-phenotype diversity among clinical isolates of mycobacterium tuberculosis by sequence-based transcriptional profiling. Genome Biology and Evolution. 5: 1849-62. PMID 24115728 DOI: 10.1093/Gbe/Evt138 |
0.467 |
|
| 2013 |
Comas I, Coscolla M, Luo T, Borrell S, Holt KE, Kato-Maeda M, Parkhill J, Malla B, Berg S, Thwaites G, Yeboah-Manu D, Bothamley G, Mei J, Wei L, Bentley S, et al. Out-of-Africa migration and Neolithic coexpansion of Mycobacterium tuberculosis with modern humans. Nature Genetics. 45: 1176-82. PMID 23995134 DOI: 10.1038/Ng.2744 |
0.39 |
|
| 2013 |
Coscolla M, Lewin A, Metzger S, Maetz-Rennsing K, Calvignac-Spencer S, Nitsche A, Dabrowski PW, Radonic A, Niemann S, Parkhill J, Couacy-Hymann E, Feldman J, Comas I, Boesch C, Gagneux S, et al. Novel Mycobacterium tuberculosis complex isolate from a wild chimpanzee. Emerging Infectious Diseases. 19: 969-76. PMID 23735084 DOI: 10.3201/Eid1906.121012 |
0.437 |
|
| 2013 |
Firdessa R, Berg S, Hailu E, Schelling E, Gumi B, Erenso G, Gadisa E, Kiros T, Habtamu M, Hussein J, Zinsstag J, Robertson BD, Ameni G, Lohan AJ, Loftus B, ... Comas I, et al. Mycobacterial lineages causing pulmonary and extrapulmonary tuberculosis, Ethiopia. Emerging Infectious Diseases. 19: 460-3. PMID 23622814 DOI: 10.3201/Eid1903.120256 |
0.337 |
|
| 2013 |
Osório NS, Rodrigues F, Gagneux S, Pedrosa J, Pinto-Carbó M, Castro AG, Young D, Comas I, Saraiva M. Evidence for diversifying selection in a set of Mycobacterium tuberculosis genes in response to antibiotic- and nonantibiotic-related pressure. Molecular Biology and Evolution. 30: 1326-36. PMID 23449927 DOI: 10.1093/Molbev/Mst038 |
0.427 |
|
| 2012 |
Stucki D, Malla B, Hostettler S, Huna T, Feldmann J, Yeboah-Manu D, Borrell S, Fenner L, Comas I, Coscollà M, Gagneux S. Two new rapid SNP-typing methods for classifying Mycobacterium tuberculosis complex into the main phylogenetic lineages. Plos One. 7: e41253. PMID 22911768 DOI: 10.1371/Journal.Pone.0041253 |
0.372 |
|
| 2012 |
Bentley SD, Comas I, Bryant JM, Walker D, Smith NH, Harris SR, Thurston S, Gagneux S, Wood J, Antonio M, Quail MA, Gehre F, Adegbola RA, Parkhill J, de Jong BC. The genome of Mycobacterium africanum West African 2 reveals a lineage-specific locus and genome erosion common to the M. tuberculosis complex. Plos Neglected Tropical Diseases. 6: e1552. PMID 22389744 DOI: 10.1371/Journal.Pntd.0001552 |
0.405 |
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| 2012 |
Comas I, Borrell S, Roetzer A, Rose G, Malla B, Kato-Maeda M, Galagan J, Niemann S, Gagneux S. Whole-genome sequencing of rifampicin-resistant Mycobacterium tuberculosis strains identifies compensatory mutations in RNA polymerase genes. Nature Genetics. 44: 106-10. PMID 22179134 DOI: 10.1038/Ng.1038 |
0.405 |
|
| 2011 |
Arnvig KB, Comas I, Thomson NR, Houghton J, Boshoff HI, Croucher NJ, Rose G, Perkins TT, Parkhill J, Dougan G, Young DB. Sequence-based analysis uncovers an abundance of non-coding RNA in the total transcriptome of Mycobacterium tuberculosis. Plos Pathogens. 7: e1002342. PMID 22072964 DOI: 10.1371/Journal.Ppat.1002342 |
0.321 |
|
| 2011 |
Comas I, Gagneux S. A role for systems epidemiology in tuberculosis research. Trends in Microbiology. 19: 492-500. PMID 21831640 DOI: 10.1016/J.Tim.2011.07.002 |
0.335 |
|
| 2011 |
Portevin D, Gagneux S, Comas I, Young D. Human macrophage responses to clinical isolates from the Mycobacterium tuberculosis complex discriminate between ancient and modern lineages. Plos Pathogens. 7: e1001307. PMID 21408618 DOI: 10.1371/Journal.Ppat.1001307 |
0.334 |
|
| 2011 |
Coscollá M, Comas I, González-Candelas F. Quantifying nonvertical inheritance in the evolution of Legionella pneumophila. Molecular Biology and Evolution. 28: 985-1001. PMID 20961962 DOI: 10.1093/Molbev/Msq278 |
0.713 |
|
| 2010 |
Comas I, Chakravartti J, Small PM, Galagan J, Niemann S, Kremer K, Ernst JD, Gagneux S. Human T cell epitopes of Mycobacterium tuberculosis are evolutionarily hyperconserved. Nature Genetics. 42: 498-503. PMID 20495566 DOI: 10.1038/Ng.590 |
0.454 |
|
| 2010 |
Novais A, Comas I, Baquero F, Cantón R, Coque TM, Moya A, González-Candelas F, Galán JC. Evolutionary trajectories of beta-lactamase CTX-M-1 cluster enzymes: predicting antibiotic resistance. Plos Pathogens. 6: e1000735. PMID 20107608 DOI: 10.1371/Journal.Ppat.1000735 |
0.732 |
|
| 2009 |
Comas I, Homolka S, Niemann S, Gagneux S. Genotyping of genetically monomorphic bacteria: DNA sequencing in Mycobacterium tuberculosis highlights the limitations of current methodologies. Plos One. 4: e7815. PMID 19915672 DOI: 10.1371/Journal.Pone.0007815 |
0.421 |
|
| 2009 |
Comas I, Gagneux S. The past and future of tuberculosis research. Plos Pathogens. 5: e1000600. PMID 19855821 DOI: 10.1371/Journal.Ppat.1000600 |
0.367 |
|
| 2008 |
Juárez P, Comas I, González-Candelas F, Calvete JJ. Evolution of snake venom disintegrins by positive Darwinian selection. Molecular Biology and Evolution. 25: 2391-407. PMID 18701431 DOI: 10.1093/Molbev/Msn179 |
0.667 |
|
| 2008 |
Comas I, González-Candelas F, Zúñiga M. Unraveling the evolutionary history of the phosphoryl-transfer chain of the phosphoenolpyruvate:phosphotransferase system through phylogenetic analyses and genome context. Bmc Evolutionary Biology. 8: 147. PMID 18485189 DOI: 10.1186/1471-2148-8-147 |
0.677 |
|
| 2007 |
Comas I, Moya A, González-Candelas F. From phylogenetics to phylogenomics: the evolutionary relationships of insect endosymbiotic gamma-Proteobacteria as a test case. Systematic Biology. 56: 1-16. PMID 17366133 DOI: 10.1080/10635150601109759 |
0.752 |
|
| 2007 |
Comas I, Moya A, González-Candelas F. Phylogenetic signal and functional categories in Proteobacteria genomes. Bmc Evolutionary Biology. 7: S7. PMID 17288580 DOI: 10.1186/1471-2148-7-S1-S7 |
0.74 |
|
| 2006 |
Comas I, Moya A, Azad RK, Lawrence JG, Gonzalez-Candelas F. The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process. Molecular Biology and Evolution. 23: 2049-57. PMID 16882701 DOI: 10.1093/Molbev/Msl075 |
0.754 |
|
| 2005 |
Zúñiga M, Comas I, Linaje R, Monedero V, Yebra MJ, Esteban CD, Deutscher J, Pérez-Martínez G, González-Candelas F. Horizontal gene transfer in the molecular evolution of mannose PTS transporters. Molecular Biology and Evolution. 22: 1673-85. PMID 16006479 DOI: 10.1093/Molbev/Msi163 |
0.642 |
|
| 2005 |
Comas I, Moya A, González-Candelas F. Validating viral quasispecies with digital organisms: a re-examination of the critical mutation rate. Bmc Evolutionary Biology. 5: 5. PMID 15651995 DOI: 10.1186/1471-2148-5-5 |
0.715 |
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