Zhenyu Jia, Ph.D. - Publications

Affiliations: 
2006 University of California, Riverside, Riverside, CA, United States 
Area:
Bioinformatics Biology

48 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2020 Li R, Wang S, Cui Y, Qu H, Chater JM, Zhang L, Wei J, Wang M, Xu Y, Yu L, Lu J, Feng Y, Zhou R, Huang Y, Ma R, ... ... Jia Z, et al. Extended application of genomic selection to screen multiomics data for prognostic signatures of prostate cancer. Briefings in Bioinformatics. PMID 32898860 DOI: 10.1093/Bib/Bbaa197  0.38
2019 Ling XH, Fu H, Chen ZY, Lu JM, Zhuo YJ, Chen JH, Zhong WD, Jia Z. miR‑505 suppresses prostate cancer progression by targeting NRCAM. Oncology Reports. PMID 31322225 DOI: 10.3892/Or.2019.7231  0.346
2019 Jia Z, Zhu J, Zhuo Y, Li R, Qu H, Wang S, Wang M, Lu J, Chater JM, Ma R, Liu ZZ, Cai Z, Wu Y, Jiang F, He H, et al. Offsetting Expression Profiles of Prognostic Markers in Prostate Tumor vs. Its Microenvironment. Frontiers in Oncology. 9: 539. PMID 31316912 DOI: 10.3389/Fonc.2019.00539  0.337
2019 Ashworth VETM, Chen H, Calderón-Vázquez CL, Arpaia ML, Kuhn DN, Durbin ML, Tommasini L, Deyett E, Jia Z, Clegg MT, Rolshausen PE. Quantitative Trait Locus Analysis in Avocado: The Challenge of a Slow-maturing Horticultural Tree Crop Journal of the American Society For Horticultural Science. 144: 352-362. DOI: 10.21273/Jashs04729-19  0.448
2018 Yuan D, Wang W, Su J, Zhang Y, Luan B, Rao H, Cheng T, Zhang W, Xiao S, Zhang M, Jiang FN, Sun Z, Jia Z, Zhong WD, Zhu J. SOCS6 functions as a tumor suppressor by inducing apoptosis and inhibiting angiogenesis in human prostate cancer. Current Cancer Drug Targets. PMID 29295692 DOI: 10.2174/1568009618666180102101442  0.373
2017 Wang J, Yang X, Chen H, Wang X, Wang X, Fang Y, Jia Z, Gao J. A high-throughput method to detect RNA profiling by integration of RT-MLPA with next generation sequencing technology. Oncotarget. PMID 28545022 DOI: 10.18632/Oncotarget.17551  0.485
2016 Rahmatpanah F, Jia Z, Hu Y, Jones F, McClelland M, Mercola D. Abstract 1973: HER2 promotes super enhancer formation in breast cancer Cancer Research. 76: 1973-1973. DOI: 10.1158/1538-7445.Am2016-1973  0.361
2015 Jia ZX, Shuai Y, Xu SD, Tan HP. Optical coherent thermal emission by excitation of magnetic polariton in multilayer nanoshell trimer. Optics Express. 23: A1096-110. PMID 26406740  0.357
2015 Zhu J, Pan C, Jiang J, Deng M, Gao H, Men B, McClelland M, Mercola D, Zhong WD, Jia Z. Six stroma-based RNA markers diagnostic for prostate cancer in European-Americans validated at the RNA and protein levels in patients in China. Oncotarget. PMID 26158290 DOI: 10.18632/Oncotarget.4430  0.396
2015 Xu S, Zhao C, Meng K, Wang X, Jia Z, Han Y, Zhang G, Yang Z. Lipid-rich carcinoma of male breast in Chinese: a case report and literature review. International Journal of Clinical and Experimental Medicine. 8: 4425-8. PMID 26064365  0.374
2015 Chen X, McClelland M, Jia Z, Rahmatpanah FB, Sawyers A, Trent J, Duggan D, Mercola D. The identification of trans-associations between prostate cancer GWAS SNPs and RNA expression differences in tumor-adjacent stroma. Oncotarget. 6: 1865-73. PMID 25638161 DOI: 10.18632/Oncotarget.2763  0.371
2015 Rahmatpanah FB, Jia Z, Chen X, Char JE, Men B, Franke AC, Jones FE, McClelland M, Mercola D. A class of genes in the HER2 regulon that is poised for transcription in breast cancer cell lines and expressed in human breast tumors. Oncotarget. 6: 1286-301. PMID 25428913 DOI: 10.18632/Oncotarget.2676  0.356
2015 Jia Z, Rahmatpanah F, Chen X, Lernhardt W, Wang Y, Xia X, Sawyers A, McClelland M, Mercola D. Abstract A63: A stroma-based 15 gene profile for prostate cancer suggests increased DNA methylation and senescence in the stroma of patients with poor prognosis Cancer Research. 75. DOI: 10.1158/1538-7445.Chtme14-A63  0.37
2014 Jia Z, Lilly MB, Koziol JA, Chen X, Xia XQ, Wang Y, Skarecky D, Sutton M, Sawyers A, Ruckle H, Carpenter PM, Wang-Rodriguez J, Jiang J, Deng M, Pan C, et al. Generation of "virtual" control groups for single arm prostate cancer adjuvant trials. Plos One. 9: e85010. PMID 24465467 DOI: 10.1371/Journal.Pone.0085010  0.314
2014 Kinseth MA, Jia Z, Rahmatpanah F, Sawyers A, Sutton M, Wang-Rodriguez J, Mercola D, McGuire KL. Expression differences between African American and Caucasian prostate cancer tissue reveals that stroma is the site of aggressive changes. International Journal of Cancer. Journal International Du Cancer. 134: 81-91. PMID 23754304 DOI: 10.1002/Ijc.28326  0.392
2014 Rahmatpanah F, Chen X, Jia Z, Men B, McClelland M, Mercola D. Abstract 3332: HER2-dependent RNA polymerase II binding in human breast tumors defines a regulon including a stem cell network Cancer Research. 74: 3332-3332. DOI: 10.1158/1538-7445.Am2014-3332  0.359
2014 Chen X, Jia Z, McClelland M, Rahmatpanah F, Mercola D. Abstract 1882: The expression phenotype of SNPs linked to the risk for prostate cancer Cancer Research. 74: 1882-1882. DOI: 10.1158/1538-7445.Am2014-1882  0.398
2013 Diao MF, Sun JJ, Tian FJ, Xu S, Jia ZH, Liu Y, Chen DL. [Effect of postaurical subcutaneously injection of triamcinolone acetonide for subjective tinnitus]. Zhonghua Yi Xue Za Zhi. 93: 3384-7. PMID 24418037 DOI: 10.3760/cma.j.issn.0376-2491.2013.42.014  0.371
2013 Pio R, Jia Z, Baron VT, Mercola D. Early growth response 3 (Egr3) is highly over-expressed in non-relapsing prostate cancer but not in relapsing prostate cancer. Plos One. 8: e54096. PMID 23342084 DOI: 10.1371/Journal.Pone.0054096  0.383
2013 Zhang G, Liu Z, Wang X, Jia Z, Han Y, Bi Y, Xu S, Cheng K, Zou W, Yang Z. Unincluded subjects need to be included for concerning the real association between TNFa-308 G/A polymorphism and cancer susceptibility. Breast Cancer Research and Treatment. 137: 645-6. PMID 23184083 DOI: 10.1007/s10549-012-2347-3  0.412
2013 Jia Z, Wang Y, Hu Y, McLaren C, Yu Y, Ye K, Xia XQ, Koziol JA, Lernhardt W, McClelland M, Mercola D. A sample selection strategy to boost the statistical power of signature detection in cancer expression profile studies. Anti-Cancer Agents in Medicinal Chemistry. 13: 203-11. PMID 22934703 DOI: 10.2174/1871520611313020004  0.348
2013 Chen X, Jia Z, McClelland M, Mercola D. Abstract 3649: Correlation of expression data and SNPs associated with aggressiveness of prostate cancer identifies specific associations. Cancer Research. 73: 3649-3649. DOI: 10.1158/1538-7445.Am2013-3649  0.37
2013 Jia Z, Rahmatpanah F, Chen X, McClelland M, Mercola D. Abstract 2811: A prostate stroma-derived profile is predictive of early relapse and reflects potential mechanisms of aggressive disease. Cancer Research. 73: 2811-2811. DOI: 10.1158/1538-7445.Am2013-2811  0.393
2012 Rahmatpanah F, Jia Z, Chen X, Jones FE, McClelland M, Mercola D. Expression of HER2 in Breast Cancer Promotes a Massive Reorganization of Gene Activity and Suggests a Role for Epigenetic Regulation. Journal of Data Mining in Genomics & Proteomics. 3. PMID 24009986 DOI: 10.4172/2153-0602.1000E102  0.304
2012 Chen X, Xu S, McClelland M, Rahmatpanah F, Sawyers A, Jia Z, Mercola D. An accurate prostate cancer prognosticator using a seven-gene signature plus Gleason score and taking cell type heterogeneity into account. Plos One. 7: e45178. PMID 23028830 DOI: 10.1371/Journal.Pone.0045178  0.571
2012 Jia Z, Rahmatpanah FB, Chen X, Lernhardt W, Wang Y, Xia XQ, Sawyers A, Sutton M, McClelland M, Mercola D. Expression changes in the stroma of prostate cancer predict subsequent relapse. Plos One. 7: e41371. PMID 22870216 DOI: 10.1371/Journal.Pone.0041371  0.383
2012 Jia Z, Rahmatpanah FB, Chen X, Lernhardt W, Wang Y, Xia X, Sawyers A, Sutton M, McClelland M, Mercola D. Correction: Expression Changes in the Stroma of Prostate Cancer Predict Subsequent Relapse Plos One. 7. DOI: 10.1371/Annotation/7De63575-E5C9-4F1D-Bb45-Fc6420E92C71  0.338
2012 Chen X, Jia Z, Dan M. Abstract B43: An accurate seven-gene signature plus Gleason score for prostate cancer prognosis Cancer Research. 72. DOI: 10.1158/1538-7445.Prca2012-B43  0.392
2012 Jia Z, Rahmatpanah F, Chen X, Lernhardt W, Wang Y, McClelland M, Mercola D. Abstract 4284: Prognosis of prostate cancer using gene expression changes in stroma Cancer Research. 72: 4284-4284. DOI: 10.1158/1538-7445.Am2012-4284  0.389
2012 Rahmatpanah F, Jia Z, Char J, McClelland M, Mercola D. Abstract 3001: The expression of HER2 in human breast cancer cells leads to massive alteration of RNA polymerase II binding and gene activation Cancer Research. 72: 3001-3001. DOI: 10.1158/1538-7445.Am2012-3001  0.343
2011 Jia Z, Xu S, Nie J, Li J, Zhong P, Wang W, Wang Y. Phenotypic analysis of HIV-1 genotypic drug-resistant isolates from China, using a single-cycle system. Molecular Diagnosis & Therapy. 15: 293-301. PMID 22047156 DOI: 10.2165/11594380-000000000-00000  0.382
2011 Jia Z, Wang Y, Sawyers A, Yao H, Rahmatpanah F, Xia XQ, Xu Q, Pio R, Turan T, Koziol JA, Goodison S, Carpenter P, Wang-Rodriguez J, Simoneau A, Meyskens F, et al. Diagnosis of prostate cancer using differentially expressed genes in stroma. Cancer Research. 71: 2476-87. PMID 21459804 DOI: 10.1158/0008-5472.Can-10-2585  0.386
2011 Basu A, Banerjee H, Rojas H, Martinez SR, Roy S, Jia Z, Lilly MB, De León M, Casiano CA. Differential expression of peroxiredoxins in prostate cancer: consistent upregulation of PRDX3 and PRDX4. The Prostate. 71: 755-65. PMID 21031435 DOI: 10.1002/Pros.21292  0.356
2010 Wang Y, Xia XQ, Jia Z, Sawyers A, Yao H, Wang-Rodriquez J, Mercola D, McClelland M. In silico estimates of tissue components in surgical samples based on expression profiling data. Cancer Research. 70: 6448-55. PMID 20663908 DOI: 10.1158/0008-5472.Can-10-0021  0.348
2010 Xu S, Jia ZF, Kang C, Huang Q, Wang G, Liu X, Zhou X, Xu P, Pu P. Upregulation of SEPT7 gene inhibits invasion of human glioma cells. Cancer Investigation. 28: 248-58. PMID 19916744 DOI: 10.3109/07357900903179609  0.401
2010 Jia Z, Wang Y, McClelland M, Sawyers A, Yao H, Rahmatpanah F, Xia X, Xu Q, Koziol J, Carpenter P, Wang-Rodriquez J, Simoneau A, Meyskens F, Sutton M, Lernhardt W, et al. Abstract 2735: Diagnosis of prostate cancer without tumor cells using differentially expressed genes in the tumor microenvironment Cancer Research. 70: 2735-2735. DOI: 10.1158/1538-7445.Am10-2735  0.373
2010 Wang Y, Xia X, Jia Z, Sawyers A, Yao H, Wang-Rodriquez J, Mercola D, McClelland M. Abstract 1988:In silicoestimates of cell components in cancer tissue based on expression profiling data Cancer Research. 70: 1988-1988. DOI: 10.1158/1538-7445.Am10-1988  0.387
2010 Basu A, Banerjee H, Rojas H, Martinez S, Mediavilla-Varela M, Sourav R, Jia Z, Mercola D, Lilly MB, Leon MD, Casiano CA. Abstract A108: Differential expression of peroxiredoxins in prostate cancer: Ethnic differences in the association of PRDX3 expression with clinical outcomes Cancer Epidemiology, Biomarkers & Prevention. 19. DOI: 10.1158/1055-9965.Disp-10-A108  0.385
2010 Jia Z, Wang Y, McClelland M, Sawyers A, Yao H, Rahmatpanah F, Xia X, Xu Q, Koziol J, Carpenter P, Wang-Rodriquez J, Simoneau A, Meyskens F, Dash A, Sutton M, et al. 2160 Diagnosis Of Prostate Cancer Without Tumor Cells Using Differentially Expressed Genes In The Tumor Microenvironment The Journal of Urology. 183. DOI: 10.1016/J.Juro.2010.02.2262  0.364
2009 Koziol JA, Feng AC, Jia Z, Wang Y, Goodison S, McClelland M, Mercola D. The wisdom of the commons: ensemble tree classifiers for prostate cancer prognosis. Bioinformatics (Oxford, England). 25: 54-60. PMID 18628288 DOI: 10.1093/Bioinformatics/Btn354  0.332
2008 Arora S, Wang Y, Jia Z, Vardar-Sengul S, Munawar A, Doctor KS, Birrer M, McClelland M, Adamson E, Mercola D. Egr1 regulates the coordinated expression of numerous EGF receptor target genes as identified by ChIP-on-chip. Genome Biology. 9: R166. PMID 19032775 DOI: 10.1186/Gb-2008-9-11-R166  0.321
2008 Xu S, Jia ZF, Huang Q, Kang C, Wang GX, Zhang AL, Liu XZ, Zhou X, Xu P, Pu PY. [Study on the anti-invasion effect of SEPT7 gene for U251MG glioma cell in vitro]. Zhonghua Yi Xue Yi Chuan Xue Za Zhi = Zhonghua Yixue Yichuanxue Zazhi = Chinese Journal of Medical Genetics. 25: 262-7. PMID 18543212  0.427
2008 Jia Z, Xu S. Bayesian mixture model analysis for detecting differentially expressed genes. International Journal of Plant Genomics. 2008: 892927. PMID 18431446 DOI: 10.1155/2008/892927  0.516
2008 Inokuchi J, Wulfkuhle JD, Jia Z, Lau A, Naito S, Petricoin EF, Mercola DE, Tyson DR, Ornstein DK. Reduced Annexin A1 Expression Contributes To Prostate Cancer By Activation Of Akt And Induction Of Il-6 The Journal of Urology. 179: 422-422. DOI: 10.1016/S0022-5347(08)61237-9  0.301
2007 Jia Z, Xu S. Mapping quantitative trait loci for expression abundance. Genetics. 176: 611-23. PMID 17339210 DOI: 10.1534/Genetics.106.065599  0.518
2007 Xu S, Jia Z. Genomewide analysis of epistatic effects for quantitative traits in barley. Genetics. 175: 1955-63. PMID 17277367 DOI: 10.1534/Genetics.106.066571  0.422
2005 Jia Z, Xu S. Clustering expressed genes on the basis of their association with a quantitative phenotype. Genetical Research. 86: 193-207. PMID 16454859 DOI: 10.1017/S0016672305007822  0.521
1996 Ma J, Xie JW, Jia ZP, Song L, Xu SY, Zhao DH. Pharmacokinetics of m-nifedipine in rabbits after intravenous injection. Zhongguo Yao Li Xue Bao = Acta Pharmacologica Sinica. 17: 109-11. PMID 9772655  0.361
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