Veerabhadran Baladandayuthapani, Ph.D. - Publications

Affiliations: 
2005 Texas A & M University, College Station, TX, United States 
Area:
Statistics, Bioinformatics Biology, Oncology

73 high-probability publications. We are testing a new system for linking publications to authors. You can help! If you notice any inaccuracies, please sign in and mark papers as correct or incorrect matches. If you identify any major omissions or other inaccuracies in the publication list, please let us know.

Year Citation  Score
2023 Olivares RJ, Rao A, Morris JS, Baladandayuthapani V. Integrative Analysis of Multi-modal Correlated Imaging-Genomics Data in Glioblastoma. Ieee International Workshop On Genomic Signal Processing and Statistics : [Proceedings]. Ieee International Workshop On Genomic Signal Processing and Statistics. 2013: 5-8. PMID 37016714 DOI: 10.1109/GENSIPS.2013.6735914  0.552
2022 Desai N, Morris J, Baladandayuthapani V. NETCELLMATCH: MULTISCALE NETWORK-BASED MATCHING OF CANCER CELL LINES TO PATIENTS USING GRAPHICAL WAVELETS. Chemistry & Biodiversity. PMID 36279370 DOI: 10.1002/cbdv.202200746  0.489
2020 Yang H, Baladandayuthapani V, Rao AUK, Morris JS. Quantile Function on Scalar Regression Analysis for Distributional Data. Journal of the American Statistical Association. 115: 90-106. PMID 32981991 DOI: 10.1080/01621459.2019.1609969  0.526
2020 Gates EDH, Lin JS, Weinberg JS, Prabhu SS, Hamilton J, Hazle JD, Fuller GN, Baladandayuthapani V, Fuentes DT, Schellingerhout D. Imaging-Based Algorithm for the Local Grading of Glioma. Ajnr. American Journal of Neuroradiology. PMID 32029466 DOI: 10.3174/Ajnr.A6405  0.314
2020 Ha MJ, Stingo FC, Baladandayuthapani V. Bayesian Structure Learning in Multilayered Genomic Networks Journal of the American Statistical Association. 1-14. DOI: 10.1080/01621459.2020.1775611  0.333
2019 Zhang Y, Morris JS, Aerry SN, Rao AUK, Baladandayuthapani V. RADIO-IBAG: RADIOMICS-BASED INTEGRATIVE BAYESIAN ANALYSIS OF MULTIPLATFORM GENOMIC DATA. The Annals of Applied Statistics. 13: 1957-1988. PMID 33224404 DOI: 10.1214/19-aoas1238  0.544
2019 Das P, Peterson CB, Do KA, Akbani R, Baladandayuthapani V. NExUS: Bayesian simultaneous network estimation across unequal sample sizes. Bioinformatics (Oxford, England). PMID 31504175 DOI: 10.1093/Bioinformatics/Btz636  0.314
2019 Maity AK, Bhattacharya A, Mallick BK, Baladandayuthapani V. Bayesian Data Integration and Variable Selection for Pan-Cancer Survival Prediction using Protein Expression Data. Biometrics. PMID 31393003 DOI: 10.1111/Biom.13132  0.602
2019 Lee W, Miranda MF, Rausch P, Baladandayuthapani V, Fazio M, Downs JC, Morris JS. Bayesian Semiparametric Functional Mixed Models for Serially Correlated Functional Data, with Application to Glaucoma Data. Journal of the American Statistical Association. 114: 495-513. PMID 31235987 DOI: 10.1080/01621459.2018.1476242  0.522
2019 Ni Y, Stingo FC, Ha MJ, Akbani R, Baladandayuthapani V. Bayesian Hierarchical Varying-sparsity Regression Models with Application to Cancer Proteogenomics. Journal of the American Statistical Association. 114: 48-60. PMID 31178611 DOI: 10.1080/01621459.2018.1434529  0.397
2019 Zhang Y, Morris JS, Aerry SN, Rao AUK, Baladandayuthapani V. Radio-iBAG: Radiomics-based integrative Bayesian analysis of multiplatform genomic data The Annals of Applied Statistics. 13: 1957-1988. DOI: 10.1214/19-Aoas1238  0.554
2019 Yang H, Baladandayuthapani V, Rao AU, Morris JS. Quantile Function on Scalar Regression Analysis for Distributional Data Journal of the American Statistical Association. 115: 90-106. DOI: 10.1080/01621459.2019.1609969  0.351
2018 Bharath K, Kurtek S, Rao A, Baladandayuthapani V. Radiologic image-based statistical shape analysis of brain tumours. Journal of the Royal Statistical Society. Series C, Applied Statistics. 67: 1357-1378. PMID 30420787 DOI: 10.1111/Rssc.12272  0.365
2018 Ha MJ, Banerjee S, Akbani R, Liang H, Mills GB, Do KA, Baladandayuthapani V. Personalized Integrated Network Modeling of the Cancer Proteome Atlas. Scientific Reports. 8: 14924. PMID 30297783 DOI: 10.1038/S41598-018-32682-X  0.392
2018 Elhalawani H, Lin TA, Volpe S, Mohamed ASR, White AL, Zafereo J, Wong AJ, Berends JE, AboHashem S, Williams B, Aymard JM, Kanwar A, Perni S, Rock CD, Cooksey L, ... ... Baladandayuthapani V, et al. Machine Learning Applications in Head and Neck Radiation Oncology: Lessons From Open-Source Radiomics Challenges. Frontiers in Oncology. 8: 294. PMID 30175071 DOI: 10.3389/Fonc.2018.00294  0.552
2018 Kundu S, Cheng Y, Shin M, Manyam G, Mallick BK, Baladandayuthapani V. Bayesian variable selection with graphical structure learning: Applications in integrative genomics. Plos One. 13: e0195070. PMID 30059495 DOI: 10.1371/Journal.Pone.0195070  0.455
2018 Davenport CA, Maity A, Baladandayuthapani V. Functional interaction-based nonlinear models with application to multiplatform genomics data. Statistics in Medicine. PMID 29737021 DOI: 10.1002/Sim.7671  0.554
2018 Zhang X, Lee HC, Shirazi F, Baladandayuthapani V, Lin H, Kuiatse I, Wang H, Jones RJ, Berkova Z, Singh RK, Lu J, Qian Y, Raina K, Coleman KG, Crews CM, et al. Protein targeting chimeric molecules specific for bromodomain and extra-terminal motif family proteins are active against pre-clinical models of multiple myeloma. Leukemia. PMID 29581547 DOI: 10.1038/S41375-018-0044-X  0.316
2018 Ni Y, Stingo FC, Baladandayuthapani V. Bayesian Graphical Regression Journal of the American Statistical Association. 114: 184-197. DOI: 10.1080/01621459.2017.1389739  0.33
2017 Morris JS, Baladandayuthapani V. Rejoinder to statistical contributions to bioinformatics: Design, modelling, structure learning and Integration. Statistical Modelling. 17: 338-357. PMID 30034293 DOI: 10.1177/1471082X17728576  0.496
2017 Yu K, Zhang Y, Yu Y, Huang C, Liu R, Li T, Yang L, Morris JS, Baladandayuthapani V, Zhu H. Radiomic analysis in prediction of Human Papilloma Virus status. Clinical and Translational Radiation Oncology. 7: 49-54. PMID 29594229 DOI: 10.1016/J.Ctro.2017.10.001  0.499
2017 Wang H, Baladandayuthapani V, Wang Z, Lin H, Berkova Z, Davis RE, Yang L, Orlowski RZ. Truncated protein tyrosine phosphatase receptor type O suppresses AKT signaling through IQ motif containing GTPase activating protein 1 and confers sensitivity to bortezomib in multiple myeloma. Oncotarget. 8: 113858-113873. PMID 29371952 DOI: 10.18632/Oncotarget.23017  0.322
2017 Zhu B, Song N, Shen R, Arora A, Machiela MJ, Song L, Landi MT, Ghosh D, Chatterjee N, Baladandayuthapani V, Zhao H. Integrating Clinical and Multiple Omics Data for Prognostic Assessment across Human Cancers. Scientific Reports. 7: 16954. PMID 29209073 DOI: 10.1038/S41598-017-17031-8  0.354
2017 Class CA, Ha MJ, Baladandayuthapani V, Do KA. iDINGO - Integrative Differential Network Analysis in Genomics with Shiny Application. Bioinformatics (Oxford, England). PMID 29194470 DOI: 10.1093/Bioinformatics/Btx750  0.339
2017 Morris JS, Baladandayuthapani V. Statistical Contributions to Bioinformatics: Design, Modeling, Structure Learning, and Integration. Statistical Modelling. 17: 245-289. PMID 29129969 DOI: 10.1177/1471082X17698255  0.56
2017 Kim S, Baladandayuthapani V, Lee JJ. Prediction-Oriented Marker Selection (PROMISE): With Application to High-Dimensional Regression. Statistics in Biosciences. 9: 217-245. PMID 28785367 DOI: 10.1007/S12561-016-9169-5  0.316
2017 Bhadra A, Rao A, Baladandayuthapani V. Inferring network structure in non-normal and mixed discrete-continuous genomic data. Biometrics. PMID 28437848 DOI: 10.1111/Biom.12711  0.417
2017 Bharath K, Kambadur P, Dey DK, Rao A, Baladandayuthapani V. Statistical Tests for Large Tree-Structured Data Journal of the American Statistical Association. 112: 1733-1743. DOI: 10.1080/01621459.2016.1240081  0.346
2017 Ni Y, Stingo FC, Baladandayuthapani V. Sparse Multi-Dimensional Graphical Models: A Unified Bayesian Framework Journal of the American Statistical Association. 112: 779-793. DOI: 10.1080/01621459.2016.1167694  0.387
2017 Zhang Y, Linder MH, Shojaie A, Ouyang Z, Shen R, Baggerly KA, Baladandayuthapani V, Zhao H. Dissecting Pathway Disturbances Using Network Topology and Multi-platform Genomics Data Statistics in Biosciences. 10: 86-106. DOI: 10.1007/S12561-017-9193-0  0.373
2016 Zhang L, Baladandayuthapani V, Zhu H, Baggerly KA, Majewski T, Czerniak BA, Morris JS. Functional CAR models for large spatially correlated functional datasets. Journal of the American Statistical Association. 111: 772-786. PMID 28018013 DOI: 10.1080/01621459.2015.1042581  0.529
2016 Saha A, Banerjee S, Kurtek S, Narang S, Lee J, Rao G, Martinez J, Bharath K, Rao AU, Baladandayuthapani V. DEMARCATE: Density-based magnetic resonance image clustering for assessing tumor heterogeneity in cancer. Neuroimage. Clinical. 12: 132-43. PMID 27408798 DOI: 10.1016/J.Nicl.2016.05.012  0.334
2016 Zoh RS, Mallick B, Ivanov I, Baladandayuthapani V, Manyam G, Chapkin RS, Lampe JW, Carroll RJ. PCAN: Probabilistic correlation analysis of two non-normal data sets. Biometrics. PMID 27037601 DOI: 10.1111/Biom.12516  0.528
2016 Guha S, Baladandayuthapani V. A nonparametric Bayesian technique for high-dimensional regression Electronic Journal of Statistics. 10: 3374-3424. DOI: 10.1214/16-Ejs1184  0.335
2015 Azadeh S, Hobbs BP, Ma L, Nielsen DA, Moeller FG, Baladandayuthapani V. Integrative Bayesian Analysis of Neuroimaging-Genetic Data with Application to Cocaine Dependence. Neuroimage. PMID 26484829 DOI: 10.1016/J.Neuroimage.2015.10.033  0.337
2015 Gregory KB, Carroll RJ, Baladandayuthapani V, Lahiri SN. A Two-Sample Test for Equality of Means in High Dimension. Journal of the American Statistical Association. 110: 837-849. PMID 26279594 DOI: 10.1080/01621459.2014.934826  0.476
2015 Ha MJ, Baladandayuthapani V, Do KA. DINGO: differential network analysis in genomics. Bioinformatics (Oxford, England). 31: 3413-20. PMID 26148744 DOI: 10.1093/Bioinformatics/Btv406  0.326
2015 Dai B, Yan S, Lara-Guerra H, Kawashima H, Sakai R, Jayachandran G, Majidi M, Mehran R, Wang J, Bekele BN, Baladandayuthapani V, Yoo SY, Wang Y, Ying J, Meng F, et al. Exogenous Restoration of TUSC2 Expression Induces Responsiveness to Erlotinib in Wildtype Epidermal Growth Factor Receptor (EGFR) Lung Cancer Cells through Context Specific Pathways Resulting in Enhanced Therapeutic Efficacy. Plos One. 10: e0123967. PMID 26053020 DOI: 10.1371/Journal.Pone.0123967  0.305
2015 Ha MJ, Baladandayuthapani V, Do KA. Prognostic gene signature identification using causal structure learning: applications in kidney cancer. Cancer Informatics. 14: 23-35. PMID 25861215 DOI: 10.4137/Cin.S14873  0.359
2015 Ni Y, Stingo FC, Baladandayuthapani V. Bayesian nonlinear model selection for gene regulatory networks. Biometrics. 71: 585-95. PMID 25854759 DOI: 10.1111/Biom.12309  0.331
2015 Gregory KB, Carroll RJ, Baladandayuthapani V, Lahiri SN. A Two-Sample Test for Equality of Means in High Dimension Journal of the American Statistical Association. 110: 837-849. DOI: 10.1080/01621459.2014.934826  0.327
2014 Baladandayuthapani V, Talluri R, Ji Y, Coombes KR, Lu Y, Hennessy BT, Davies MA, Mallick BK. BAYESIAN SPARSE GRAPHICAL MODELS FOR CLASSIFICATION WITH APPLICATION TO PROTEIN EXPRESSION DATA. The Annals of Applied Statistics. 8: 1443-1468. PMID 26246866 DOI: 10.1214/14-Aoas722  0.677
2014 Gregory KB, Momin AA, Coombes KR, Baladandayuthapani V. Latent Feature Decompositions for Integrative Analysis of Multi-Platform Genomic Data. Ieee/Acm Transactions On Computational Biology and Bioinformatics / Ieee, Acm. 11: 984-94. PMID 26146492 DOI: 10.1109/Tcbb.2014.2325035  0.427
2014 Zhang L, Baladandayuthapani V, Mallick BK, Manyam GC, Thompson PA, Bondy ML, Do KA. Bayesian hierarchical structured variable selection methods with application to MIP studies in breast cancer. Journal of the Royal Statistical Society. Series C, Applied Statistics. 63: 595-620. PMID 25705056 DOI: 10.1111/Rssc.12053  0.356
2014 Zhang L, Morris JS, Zhang J, Orlowski RZ, Baladandayuthapani V. Bayesian joint selection of genes and pathways: applications in multiple myeloma genomics. Cancer Informatics. 13: 113-23. PMID 25520554 DOI: 10.4137/Cin.S13787  0.548
2014 Guha S, Ji Y, Baladandayuthapani V. Bayesian disease classification using copy number data. Cancer Informatics. 13: 83-91. PMID 25336897 DOI: 10.4137/Cin.S13785  0.38
2014 Ni Y, Stingo FC, Baladandayuthapani V. Integrative bayesian network analysis of genomic data. Cancer Informatics. 13: 39-48. PMID 25288878 DOI: 10.4137/Cin.S13786  0.416
2014 Jiang H, An L, Baladandayuthapani V, Auer PL. Classification, predictive modelling, and statistical analysis of cancer data (a). Cancer Informatics. 13: 1-3. PMID 25288874 DOI: 10.4137/Cin.S19328  0.37
2014 Talluri R, Baladandayuthapani V, Mallick BK. Bayesian sparse graphical models and their mixtures. Stat. 3: 109-125. PMID 24948842 DOI: 10.1002/sta4.49  0.643
2014 Bailey AM, Zhan L, Maru D, Shureiqi I, Pickering CR, Kiriakova G, Izzo J, He N, Wei C, Baladandayuthapani V, Liang H, Kopetz S, Powis G, Guo GL. FXR silencing in human colon cancer by DNA methylation and KRAS signaling. American Journal of Physiology. Gastrointestinal and Liver Physiology. 306: G48-58. PMID 24177031 DOI: 10.1152/Ajpgi.00234.2013  0.313
2014 Baladandayuthapani V, Talluri R, Ji Y, Coombes KR, Lu Y, Hennessy BT, Davies MA, Mallick BK. Bayesian sparse graphical models for classification with application to protein expression data Annals of Applied Statistics. 8: 1443-1468. DOI: 10.1214/14-AOAS722  0.627
2014 Zhang X, Baladandayuthapani V, Lin HY, Mulligan G, Li B, Esseltine D, Qi L, Xu J, Hunziker W, Barlogie B, Usmani SZ, Zhang Q, Crowley J, Hoering A, Li B, et al. Studies of the Proteasome Inhibitor Sensitivity Modulator Tight Junction Protein 1 Highlight a Role for Signaling through the Epidermal Growth Factor Receptor in Determining Proteasome Capacity Blood. 124: 3414-3414. DOI: 10.1182/Blood.V124.21.3414.3414  0.308
2014 Wang H, Baladandayuthapani V, Lin HY, Wang X, Li B, Zhang X, Kuiatse I, Wang H, Gu D, Zhong L, Ma W, Davis RE, Orlowski RZ. Mucin 20 (MUC20) Modulates Proteasome Assembly Chaperones through the c-MET Pathway and Is a Biomarker of Proteasome Inhibitor Sensitivity in Myeloma Blood. 124: 274-274. DOI: 10.1182/Blood.V124.21.274.274  0.318
2013 Wang W, Baladandayuthapani V, Holmes CC, Do KA. Integrative network-based Bayesian analysis of diverse genomics data. Bmc Bioinformatics. 14: S8. PMID 24267288 DOI: 10.1186/1471-2105-14-S13-S8  0.372
2013 Jennings EM, Morris JS, Carroll RJ, Manyam GC, Baladandayuthapani V. Bayesian methods for expression-based integration of various types of genomics data. Eurasip Journal On Bioinformatics & Systems Biology. 2013: 13. PMID 24053265 DOI: 10.1186/1687-4153-2013-13  0.649
2013 Srivastava S, Wang W, Manyam G, Ordonez C, Baladandayuthapani V. Integrating multi-platform genomic data using hierarchical Bayesian relevance vector machines. Eurasip Journal On Bioinformatics & Systems Biology. 2013: 9. PMID 23809014 DOI: 10.1186/1687-4153-2013-9  0.398
2013 Wang W, Baladandayuthapani V, Morris JS, Broom BM, Manyam G, Do KA. iBAG: integrative Bayesian analysis of high-dimensional multiplatform genomics data. Bioinformatics (Oxford, England). 29: 149-59. PMID 23142963 DOI: 10.1093/Bioinformatics/Bts655  0.616
2013 Wang H, Baladandayuthapani V, Wang Z, Zhang J, Lin HY, Davis RE, Yang L, Orlowski RZ. Expression Of Truncated Protein Tyrosine Phosphatase, Receptor Type, O (PTPROt) Influences Multiple Myeloma Sensitivity To Bortezomib Through Akt Signaling, and Is a Favorable Clinical Prognostic Factor Blood. 122: 2520-2520. DOI: 10.1182/Blood.V122.21.2520.2520  0.358
2013 Zhang X, Baladandayuthapani V, Lin HY, Barlogie B, Usmani SZ, Yang L, Orlowski RZ. Identification Of Tight Junction Protein (TJP)-1 As a Modulator and Biomarker Of Proteasome Inhibitor Sensitivity In Multiple Myeloma Blood. 122: 123-123. DOI: 10.1182/Blood.V122.21.123.123  0.349
2013 Olivares RJ, Rao A, Rao G, Morris JS, Baladandayuthapani V. Integrative analysis of multi-modal correlated imaging-genomics data in glioblastoma Proceedings - Ieee International Workshop On Genomic Signal Processing and Statistics. 5-8. DOI: 10.1109/GENSIPS.2013.6735914  0.497
2012 Dorkhom SJ, Zaman S, Thomas SK, Alexanian R, Shah JJ, Weber DM, Wang M, Anderson ML, Baladandayuthapani V, Lin YH, Fu M, Stellrecht CM, de Partovi CM, Gandhi VV, Orlowski RZ. Phase II Study of the c-Met Inhibitor ARQ 197 (Tivantinib) in Patients with Relapsed Multiple Myeloma. Blood. 120: 2976-2976. DOI: 10.1182/Blood.V120.21.2976.2976  0.315
2012 Jennings EM, Morris JS, Carroll RJ, Manyam GC, Baladandayuthapani V. Hierarchical Bayesian methods for integration of various types of genomics data Proceedings - Ieee International Workshop On Genomic Signal Processing and Statistics. 5-8. DOI: 10.1109/GENSIPS.2012.6507713  0.593
2012 Hrafnkelsson B, Morris JS, Baladandayuthapani V. Spatial modeling of annual minimum and maximum temperatures in Iceland Meteorology and Atmospheric Physics. 116: 43-61. DOI: 10.1007/s00703-010-0101-0  0.41
2011 Morris JS, Baladandayuthapani V, Herrick RC, Sanna P, Gutstein H. AUTOMATED ANALYSIS OF QUANTITATIVE IMAGE DATA USING ISOMORPHIC FUNCTIONAL MIXED MODELS, WITH APPLICATION TO PROTEOMICS DATA. The Annals of Applied Statistics. 5: 894-923. PMID 22408711 DOI: 10.1214/10-Aoas407  0.554
2011 Thompson PA, Brewster AM, Kim-Anh D, Baladandayuthapani V, Broom BM, Edgerton ME, Hahn KM, Murray JL, Sahin A, Tsavachidis S, Wang Y, Zhang L, Hortobagyi GN, Mills GB, Bondy ML. Selective genomic copy number imbalances and probability of recurrence in early-stage breast cancer. Plos One. 6: e23543. PMID 21858162 DOI: 10.1371/Journal.Pone.0023543  0.303
2011 Jones RJ, Baladandayuthapani V, Neelapu S, Fayad LE, Romaguera JE, Wang M, Sharma R, Yang D, Orlowski RZ. HDM-2 inhibition suppresses expression of ribonucleotide reductase subunit M2, and synergistically enhances gemcitabine-induced cytotoxicity in mantle cell lymphoma. Blood. 118: 4140-9. PMID 21844567 DOI: 10.1182/Blood-2011-03-340323  0.315
2011 Bonato V, Baladandayuthapani V, Broom BM, Sulman EP, Aldape KD, Do KA. Bayesian ensemble methods for survival prediction in gene expression data. Bioinformatics (Oxford, England). 27: 359-67. PMID 21148161 DOI: 10.1093/Bioinformatics/Btq660  0.375
2010 Baladandayuthapani V, Ji Y, Talluri R, Nieto-Barajas LE, Morris JS. Bayesian Random Segmentation Models to Identify Shared Copy Number Aberrations for Array CGH Data. Journal of the American Statistical Association. 105: 1358-1375. PMID 21512611 DOI: 10.1198/Jasa.2010.Ap09250  0.723
2010 Zhou L, Huang JZ, Martinez JG, Maity A, Baladandayuthapani V, Carroll RJ. Reduced Rank Mixed Effects Models for Spatially Correlated Hierarchical Functional Data. Journal of the American Statistical Association. 105: 390-400. PMID 20396628 DOI: 10.1198/Jasa.2010.Tm08737  0.631
2008 Baladandayuthapani V, Mallick BK, Young Hong M, Lupton JR, Turner ND, Carroll RJ. Bayesian hierarchical spatially correlated functional data analysis with application to colon carcinogenesis. Biometrics. 64: 64-73. PMID 17608780 DOI: 10.1111/J.1541-0420.2007.00846.X  0.536
2008 Baladandayuthapani V, Mallick BK, Carroll RJ. Spatially adaptive Bayesian penalized regression splines (P-splines) (Journal of Computational and Graphical Statistics (2005) 14, 378-394) Journal of Computational and Graphical Statistics. 17: 515. DOI: 10.1198/106186008X322517  0.369
2005 Baladandayuthapani V, Mallick BK, Carroll RJ. Spatially Adaptive Bayesian Penalized Regression Splines (P-splines) Journal of Computational and Graphical Statistics. 14: 378-394. DOI: 10.1198/106186005X47345  0.492
2005 Baladandayuthapani V, Ray S, Mallick BK. Bayesian Methods for DNA Microarray Data Analysis Handbook of Statistics. 25: 713-742. DOI: 10.1016/S0169-7161(05)25024-1  0.611
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