| Year |
Citation |
Score |
| 2023 |
Essel E, Zavala EI, Schulz-Kornas E, Kozlikin MB, Fewlass H, Vernot B, Shunkov MV, Derevianko AP, Douka K, Barnes I, Soulier MC, Schmidt A, Szymanski M, Tsanova T, Sirakov N, et al. Ancient human DNA recovered from a Palaeolithic pendant. Nature. PMID 37138083 DOI: 10.1038/s41586-023-06035-2 |
0.32 |
|
| 2023 |
Lackner M, Helmbrecht N, Pääbo S, Riesenberg S. Detection of unintended on-target effects in CRISPR genome editing by DNA donors carrying diagnostic substitutions. Nucleic Acids Research. PMID 36620901 DOI: 10.1093/nar/gkac1254 |
0.319 |
|
| 2020 |
Dannemann M, He Z, Heide C, Vernot B, Sidow L, Kanton S, Weigert A, Treutlein B, Pääbo S, Kelso J, Camp JG. Human Stem Cell Resources Are an Inroad to Neandertal DNA Functions. Stem Cell Reports. PMID 32559457 DOI: 10.1016/J.Stemcr.2020.05.018 |
0.421 |
|
| 2020 |
Mafessoni F, Grote S, de Filippo C, Slon V, Kolobova KA, Viola B, Markin SV, Chintalapati M, Peyrégne S, Skov L, Skoglund P, Krivoshapkin AI, Derevianko AP, Meyer M, Kelso J, et al. A high-coverage Neandertal genome from Chagyrskaya Cave. Proceedings of the National Academy of Sciences of the United States of America. PMID 32546518 DOI: 10.1073/Pnas.2004944117 |
0.382 |
|
| 2020 |
Zeberg H, Kelso J, Pääbo S. The Neandertal Progesterone Receptor. Molecular Biology and Evolution. PMID 32437543 DOI: 10.1093/Molbev/Msaa119 |
0.306 |
|
| 2020 |
Hublin JJ, Sirakov N, Aldeias V, Bailey S, Bard E, Delvigne V, Endarova E, Fagault Y, Fewlass H, Hajdinjak M, Kromer B, Krumov I, Marreiros J, Martisius NL, Paskulin L, et al. Initial Upper Palaeolithic Homo sapiens from Bacho Kiro Cave, Bulgaria. Nature. 581: 299-302. PMID 32433609 DOI: 10.1038/S41586-020-2259-Z |
0.342 |
|
| 2020 |
Khrameeva E, Kurochkin I, Han D, Guijarro P, Kanton S, Santel M, Qian Z, Rong S, Mazin P, Sabirov M, Bulat M, Efimova O, Tkachev A, Guo S, Sherwood CC, et al. Single-cell-resolution transcriptome map of human, chimpanzee, bonobo, and macaque brains. Genome Research. PMID 32424074 DOI: 10.1101/Gr.256958.119 |
0.398 |
|
| 2019 |
Kanton S, Boyle MJ, He Z, Santel M, Weigert A, Sanchís-Calleja F, Guijarro P, Sidow L, Fleck JS, Han D, Qian Z, Heide M, Huttner WB, Khaitovich P, Pääbo S, et al. Organoid single-cell genomic atlas uncovers human-specific features of brain development. Nature. 574: 418-422. PMID 31619793 DOI: 10.1038/S41586-019-1654-9 |
0.392 |
|
| 2019 |
Riesenberg S, Chintalapati M, Macak D, Kanis P, Maricic T, Pääbo S. Simultaneous precise editing of multiple genes in human cells. Nucleic Acids Research. PMID 31392986 DOI: 10.1093/Nar/Gkz669 |
0.406 |
|
| 2019 |
Bokelmann L, Hajdinjak M, Peyrégne S, Brace S, Essel E, de Filippo C, Glocke I, Grote S, Mafessoni F, Nagel S, Kelso J, Prüfer K, Vernot B, Barnes I, Pääbo S, et al. A genetic analysis of the Gibraltar Neanderthals. Proceedings of the National Academy of Sciences of the United States of America. PMID 31308224 DOI: 10.1073/Pnas.1903984116 |
0.431 |
|
| 2019 |
Peyrégne S, Slon V, Mafessoni F, de Filippo C, Hajdinjak M, Nagel S, Nickel B, Essel E, Le Cabec A, Wehrberger K, Conard NJ, Kind CJ, Posth C, Krause J, Abrams G, et al. Nuclear DNA from two early Neandertals reveals 80,000 years of genetic continuity in Europe. Science Advances. 5: eaaw5873. PMID 31249872 DOI: 10.1126/Sciadv.Aaw5873 |
0.612 |
|
| 2019 |
Douka K, Slon V, Jacobs Z, Ramsey CB, Shunkov MV, Derevianko AP, Mafessoni F, Kozlikin MB, Li B, Grün R, Comeskey D, Devièse T, Brown S, Viola B, Kinsley L, et al. Age estimates for hominin fossils and the onset of the Upper Palaeolithic at Denisova Cave. Nature. 565: 640-644. PMID 30700871 DOI: 10.1038/S41586-018-0870-Z |
0.407 |
|
| 2019 |
Devièse T, Massilani D, Yi S, Comeskey D, Nagel S, Nickel B, Ribechini E, Lee J, Tseveendorj D, Gunchinsuren B, Meyer M, Pääbo S, Higham T. Compound-specific radiocarbon dating and mitochondrial DNA analysis of the Pleistocene hominin from Salkhit Mongolia. Nature Communications. 10: 274. PMID 30700710 DOI: 10.1038/S41467-018-08018-8 |
0.43 |
|
| 2019 |
Petr M, Pääbo S, Kelso J, Vernot B. Limits of long-term selection against Neandertal introgression. Proceedings of the National Academy of Sciences of the United States of America. PMID 30647110 DOI: 10.1073/Pnas.1814338116 |
0.455 |
|
| 2018 |
Van Laer B, Kapp U, Soler-Lopez M, Moczulska K, Pääbo S, Leonard G, Mueller-Dieckmann C. Molecular comparison of Neanderthal and Modern Human adenylosuccinate lyase. Scientific Reports. 8: 18008. PMID 30573755 DOI: 10.1038/S41598-018-36195-5 |
0.372 |
|
| 2018 |
Gunz P, Tilot AK, Wittfeld K, Teumer A, Shapland CY, van Erp TGM, Dannemann M, Vernot B, Neubauer S, Guadalupe T, Fernández G, Brunner HG, Enard W, Fallon J, Hosten N, et al. Neandertal Introgression Sheds Light on Modern Human Endocranial Globularity. Current Biology : Cb. PMID 30554901 DOI: 10.1016/J.Cub.2018.10.065 |
0.453 |
|
| 2018 |
Lamnidis TC, Majander K, Jeong C, Salmela E, Wessman A, Moiseyev V, Khartanovich V, Balanovsky O, Ongyerth M, Weihmann A, Sajantila A, Kelso J, Pääbo S, Onkamo P, Haak W, et al. Ancient Fennoscandian genomes reveal origin and spread of Siberian ancestry in Europe. Nature Communications. 9: 5018. PMID 30479341 DOI: 10.1038/S41467-018-07483-5 |
0.568 |
|
| 2018 |
Slon V, Mafessoni F, Vernot B, de Filippo C, Grote S, Viola B, Hajdinjak M, Peyrégne S, Nagel S, Brown S, Douka K, Higham T, Kozlikin MB, Shunkov MV, Derevianko AP, et al. The genome of the offspring of a Neanderthal mother and a Denisovan father. Nature. PMID 30135579 DOI: 10.1038/S41586-018-0455-X |
0.386 |
|
| 2018 |
Vernot B, Pääbo S. The Predecessors Within . . . Cell. 173: 6-7. PMID 29570998 DOI: 10.1016/J.Cell.2018.03.023 |
0.415 |
|
| 2018 |
Hajdinjak M, Fu Q, Hübner A, Petr M, Mafessoni F, Grote S, Skoglund P, Narasimham V, Rougier H, Crevecoeur I, Semal P, Soressi M, Talamo S, Hublin JJ, Gušić I, et al. Reconstructing the genetic history of late Neanderthals. Nature. PMID 29562232 DOI: 10.1038/Nature26151 |
0.672 |
|
| 2018 |
van de Loosdrecht M, Bouzouggar A, Humphrey L, Posth C, Barton N, Aximu-Petri A, Nickel B, Nagel S, Talbi EH, El Hajraoui MA, Amzazi S, Hublin JJ, Pääbo S, Schiffels S, Meyer M, et al. Pleistocene North African genomes link Near Eastern and sub-Saharan African human populations. Science (New York, N.Y.). PMID 29545507 DOI: 10.1126/Science.Aar8380 |
0.607 |
|
| 2017 |
Yang MA, Gao X, Theunert C, Tong H, Aximu-Petri A, Nickel B, Slatkin M, Meyer M, Pääbo S, Kelso J, Fu Q. 40,000-Year-Old Individual from Asia Provides Insight into Early Population Structure in Eurasia. Current Biology : Cb. PMID 29033327 DOI: 10.1016/J.Cub.2017.09.030 |
0.373 |
|
| 2017 |
Prüfer K, de Filippo C, Grote S, Mafessoni F, Korlević P, Hajdinjak M, Vernot B, Skov L, Hsieh P, Peyrégne S, Reher D, Hopfe C, Nagel S, Maricic T, Fu Q, et al. A high-coverage Neandertal genome from Vindija Cave in Croatia. Science (New York, N.Y.). PMID 28982794 DOI: 10.1126/Science.Aao1887 |
0.448 |
|
| 2017 |
Skoglund P, Thompson JC, Prendergast ME, Mittnik A, Sirak K, Hajdinjak M, Salie T, Rohland N, Mallick S, Peltzer A, Heinze A, Olalde I, Ferry M, Harney E, Michel M, et al. Reconstructing Prehistoric African Population Structure. Cell. 171: 59-71.e21. PMID 28938123 DOI: 10.1016/J.Cell.2017.08.049 |
0.579 |
|
| 2017 |
Slon V, Viola B, Renaud G, Gansauge MT, Benazzi S, Sawyer S, Hublin JJ, Shunkov MV, Derevianko AP, Kelso J, Prüfer K, Meyer M, Pääbo S. A fourth Denisovan individual. Science Advances. 3: e1700186. PMID 28695206 DOI: 10.1126/Sciadv.1700186 |
0.464 |
|
| 2017 |
Douka K, Slon V, Stringer C, Potts R, Hübner A, Meyer M, Spoor F, Pääbo S, Higham T. Direct radiocarbon dating and DNA analysis of the Darra-i-Kur (Afghanistan) human temporal bone. Journal of Human Evolution. 107: 86-93. PMID 28526291 DOI: 10.1016/J.Jhevol.2017.03.003 |
0.432 |
|
| 2017 |
Slon V, Hopfe C, Weiß CL, Mafessoni F, de la Rasilla M, Lalueza-Fox C, Rosas A, Soressi M, Knul MV, Miller R, Stewart JR, Derevianko AP, Jacobs Z, Li B, Roberts RG, et al. Neandertal and Denisovan DNA from Pleistocene sediments. Science (New York, N.Y.). PMID 28450384 DOI: 10.1126/Science.Aam9695 |
0.788 |
|
| 2017 |
Li Q, Bozek K, Xu C, Guo Y, Sun J, Pääbo S, Sherwood CC, Hof PR, Ely JJ, Li Y, Willmitzer L, Giavalisco P, Khaitovich P. Changes in lipidome composition during brain development in humans, chimpanzees, and macaque monkeys. Molecular Biology and Evolution. PMID 28158622 DOI: 10.1093/Molbev/Msx065 |
0.325 |
|
| 2016 |
Florio M, Namba T, Pääbo S, Hiller M, Huttner WB. A single splice site mutation in human-specific ARHGAP11B causes basal progenitor amplification. Science Advances. 2: e1601941. PMID 27957544 DOI: 10.1126/Sciadv.1601941 |
0.403 |
|
| 2016 |
Liu X, Han D, Somel M, Jiang X, Hu H, Guijarro P, Zhang N, Mitchell A, Halene T, Ely JJ, Sherwood CC, Hof PR, Qiu Z, Pääbo S, Akbarian S, et al. Disruption of an Evolutionarily Novel Synaptic Expression Pattern in Autism. Plos Biology. 14: e1002558. PMID 27685936 DOI: 10.1371/Journal.Pbio.1002558 |
0.317 |
|
| 2016 |
Mora-Bermúdez F, Badsha F, Kanton S, Camp JG, Vernot B, Köhler K, Voigt B, Okita K, Maricic T, He Z, Lachmann R, Pääbo S, Treutlein B, Huttner WB. Differences and similarities between human and chimpanzee neural progenitors during cerebral cortex development. Elife. 5. PMID 27669147 DOI: 10.7554/Elife.18683 |
0.354 |
|
| 2016 |
Mallick S, Li H, Lipson M, Mathieson I, Gymrek M, Racimo F, Zhao M, Chennagiri N, Nordenfelt S, Tandon A, Skoglund P, Lazaridis I, Sankararaman S, Fu Q, Rohland N, et al. The Simons Genome Diversity Project: 300 genomes from 142 diverse populations. Nature. PMID 27654912 DOI: 10.1038/Nature18964 |
0.708 |
|
| 2016 |
Welker F, Hajdinjak M, Talamo S, Jaouen K, Dannemann M, David F, Julien M, Meyer M, Kelso J, Barnes I, Brace S, Kamminga P, Fischer R, Kessler BM, Stewart JR, et al. Palaeoproteomic evidence identifies archaic hominins associated with the Châtelperronian at the Grotte du Renne. Proceedings of the National Academy of Sciences of the United States of America. PMID 27638212 DOI: 10.1073/Pnas.1605834113 |
0.321 |
|
| 2016 |
Krause J, Pääbo S. Genetic Time Travel. Genetics. 203: 9-12. PMID 27183562 DOI: 10.1534/Genetics.116.187856 |
0.571 |
|
| 2016 |
Fu Q, Posth C, Hajdinjak M, Petr M, Mallick S, Fernandes D, Furtwängler A, Haak W, Meyer M, Mittnik A, Nickel B, Peltzer A, Rohland N, Slon V, Talamo S, et al. The genetic history of Ice Age Europe. Nature. PMID 27135931 DOI: 10.1038/Nature17993 |
0.589 |
|
| 2016 |
Li Q, Guo S, Jiang X, Bryk J, Naumann R, Enard W, Tomita M, Sugimoto M, Khaitovich P, Pääbo S. Mice carrying a human GLUD2 gene recapitulate aspects of human transcriptome and metabolome development. Proceedings of the National Academy of Sciences of the United States of America. PMID 27118840 DOI: 10.1073/Pnas.1519261113 |
0.332 |
|
| 2016 |
Brown S, Higham T, Slon V, Pääbo S, Meyer M, Douka K, Brock F, Comeskey D, Procopio N, Shunkov M, Derevianko A, Buckley M. Identification of a new hominin bone from Denisova Cave, Siberia using collagen fingerprinting and mitochondrial DNA analysis. Scientific Reports. 6: 23559. PMID 27020421 DOI: 10.1038/Srep23559 |
0.399 |
|
| 2016 |
Vernot B, Tucci S, Kelso J, Schraiber JG, Wolf AB, Gittelman RM, Dannemann M, Grote S, McCoy RC, Norton H, Scheinfeldt LB, Merriwether DA, Koki G, Friedlaender JS, Wakefield J, et al. Excavating Neandertal and Denisovan DNA from the genomes of Melanesian individuals. Science (New York, N.Y.). PMID 26989198 DOI: 10.1126/Science.Aad9416 |
0.447 |
|
| 2016 |
Meyer M, Arsuaga JL, de Filippo C, Nagel S, Aximu-Petri A, Nickel B, Martínez I, Gracia A, Bermúdez de Castro JM, Carbonell E, Viola B, Kelso J, Prüfer K, Pääbo S. Nuclear DNA sequences from the Middle Pleistocene Sima de los Huesos hominins. Nature. 531: 504-7. PMID 26976447 DOI: 10.1038/Nature17405 |
0.435 |
|
| 2016 |
Kuhlwilm M, Gronau I, Hubisz MJ, de Filippo C, Prado-Martinez J, Kircher M, Fu Q, Burbano HA, Lalueza-Fox C, de la Rasilla M, Rosas A, Rudan P, Brajkovic D, Kucan Ž, Gušic I, et al. Ancient gene flow from early modern humans into Eastern Neanderthals. Nature. PMID 26886800 DOI: 10.1038/Nature16544 |
0.725 |
|
| 2015 |
Camp JG, Badsha F, Florio M, Kanton S, Gerber T, Wilsch-Bräuninger M, Lewitus E, Sykes A, Hevers W, Lancaster M, Knoblich JA, Lachmann R, Pääbo S, Huttner WB, Treutlein B. Human cerebral organoids recapitulate gene expression programs of fetal neocortex development. Proceedings of the National Academy of Sciences of the United States of America. PMID 26644564 DOI: 10.1073/Pnas.1520760112 |
0.308 |
|
| 2015 |
Sawyer S, Renaud G, Viola B, Hublin JJ, Gansauge MT, Shunkov MV, Derevianko AP, Prüfer K, Kelso J, Pääbo S. Nuclear and mitochondrial DNA sequences from two Denisovan individuals. Proceedings of the National Academy of Sciences of the United States of America. PMID 26630009 DOI: 10.1073/Pnas.1519905112 |
0.476 |
|
| 2015 |
Weyer S, Pääbo S. Functional Analyses of Transcription Factor Binding Sites that Differ between Present-Day and Archaic Humans. Molecular Biology and Evolution. PMID 26454764 DOI: 10.1093/Molbev/Msv215 |
0.354 |
|
| 2015 |
Hammerschmidt K, Schreiweis C, Minge C, Pääbo S, Fischer J, Enard W. A humanized version of Foxp2 does not affect ultrasonic vocalization in adult mice. Genes, Brain, and Behavior. PMID 26250064 DOI: 10.1111/Gbb.12237 |
0.308 |
|
| 2015 |
Ronke C, Dannemann M, Halbwax M, Fischer A, Helmschrodt C, Brügel M, André C, Atencia R, Mugisha L, Scholz M, Ceglarek U, Thiery J, Pääbo S, Prüfer K, Kelso J. Lineage-Specific Changes in Biomarkers in Great Apes and Humans. Plos One. 10: e0134548. PMID 26247603 DOI: 10.1371/Journal.Pone.0134548 |
0.367 |
|
| 2015 |
Fu Q, Hajdinjak M, Moldovan OT, Constantin S, Mallick S, Skoglund P, Patterson N, Rohland N, Lazaridis I, Nickel B, Viola B, Prüfer K, Meyer M, Kelso J, Reich D, et al. An early modern human from Romania with a recent Neanderthal ancestor. Nature. PMID 26098372 DOI: 10.1038/Nature14558 |
0.471 |
|
| 2015 |
Pääbo S. The diverse origins of the human gene pool. Nature Reviews. Genetics. 16: 313-4. PMID 25982166 DOI: 10.1038/Nrg3954 |
0.418 |
|
| 2015 |
Benazzi S, Slon V, Talamo S, Negrino F, Peresani M, Bailey SE, Sawyer S, Panetta D, Vicino G, Starnini E, Mannino MA, Salvadori PA, Meyer M, Pääbo S, Hublin JJ. Archaeology. The makers of the Protoaurignacian and implications for Neandertal extinction. Science (New York, N.Y.). 348: 793-6. PMID 25908660 DOI: 10.1126/Science.Aaa2773 |
0.39 |
|
| 2015 |
Florio M, Albert M, Taverna E, Namba T, Brandl H, Lewitus E, Haffner C, Sykes A, Wong FK, Peters J, Guhr E, Klemroth S, Prüfer K, Kelso J, Naumann R, et al. Human-specific gene ARHGAP11B promotes basal progenitor amplification and neocortex expansion. Science (New York, N.Y.). 347: 1465-70. PMID 25721503 DOI: 10.1126/Science.Aaa1975 |
0.379 |
|
| 2015 |
Bozek K, Wei Y, Yan Z, Liu X, Xiong J, Sugimoto M, Tomita M, Pääbo S, Sherwood CC, Hof PR, Ely JJ, Li Y, Steinhauser D, Willmitzer L, Giavalisco P, et al. Organization and evolution of brain lipidome revealed by large-scale analysis of human, chimpanzee, macaque, and mouse tissues. Neuron. 85: 695-702. PMID 25661180 DOI: 10.1016/J.Neuron.2015.01.003 |
0.304 |
|
| 2015 |
Teixeira JC, de Filippo C, Weihmann A, Meneu JR, Racimo F, Dannemann M, Nickel B, Fischer A, Halbwax M, Andre C, Atencia R, Meyer M, Parra G, Pääbo S, Andrés AM. Long-Term Balancing Selection in LAD1 Maintains a Missense Trans-Species Polymorphism in Humans, Chimpanzees, and Bonobos. Molecular Biology and Evolution. 32: 1186-96. PMID 25605789 DOI: 10.1093/Molbev/Msv007 |
0.383 |
|
| 2015 |
Pääbo S. The contribution of ancient hominin genomes from Siberia to our understanding of human evolution Herald of the Russian Academy of Sciences. 85: 392-396. DOI: 10.1134/S1019331615050081 |
0.407 |
|
| 2014 |
Fu Q, Li H, Moorjani P, Jay F, Slepchenko SM, Bondarev AA, Johnson PL, Aximu-Petri A, Prüfer K, de Filippo C, Meyer M, Zwyns N, Salazar-García DC, Kuzmin YV, Keates SG, et al. Genome sequence of a 45,000-year-old modern human from western Siberia. Nature. 514: 445-9. PMID 25341783 DOI: 10.1038/Nature13810 |
0.397 |
|
| 2014 |
Lazaridis I, Patterson N, Mittnik A, Renaud G, Mallick S, Kirsanow K, Sudmant PH, Schraiber JG, Castellano S, Lipson M, Berger B, Economou C, Bollongino R, Fu Q, Bos KI, et al. Ancient human genomes suggest three ancestral populations for present-day Europeans. Nature. 513: 409-13. PMID 25230663 DOI: 10.1038/Nature13673 |
0.687 |
|
| 2014 |
Schreiweis C, Bornschein U, Burguière E, Kerimoglu C, Schreiter S, Dannemann M, Goyal S, Rea E, French CA, Puliyadi R, Groszer M, Fisher SE, Mundry R, Winter C, Hevers W, et al. Humanized Foxp2 accelerates learning by enhancing transitions from declarative to procedural performance. Proceedings of the National Academy of Sciences of the United States of America. 111: 14253-8. PMID 25225386 DOI: 10.1073/Pnas.1414542111 |
0.318 |
|
| 2014 |
Heyne HO, Lautenschläger S, Nelson R, Besnier F, Rotival M, Cagan A, Kozhemyakina R, Plyusnina IZ, Trut L, Carlborg Ö, Petretto E, Kruglyak L, Pääbo S, Schöneberg T, Albert FW. Genetic influences on brain gene expression in rats selected for tameness and aggression. Genetics. 198: 1277-90. PMID 25189874 DOI: 10.1534/Genetics.114.168948 |
0.326 |
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| 2014 |
Lindskog C, Kuhlwilm M, Davierwala A, Fu N, Hegde G, Uhlén M, Navani S, Pääbo S, Pontén F. Analysis of candidate genes for lineage-specific expression changes in humans and primates. Journal of Proteome Research. 13: 3596-606. PMID 24911366 DOI: 10.1021/Pr500045F |
0.393 |
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| 2014 |
Bozek K, Wei Y, Yan Z, Liu X, Xiong J, Sugimoto M, Tomita M, Pääbo S, Pieszek R, Sherwood CC, Hof PR, Ely JJ, Steinhauser D, Willmitzer L, Bangsbo J, et al. Exceptional evolutionary divergence of human muscle and brain metabolomes parallels human cognitive and physical uniqueness. Plos Biology. 12: e1001871. PMID 24866127 DOI: 10.1371/Journal.Pbio.1001871 |
0.329 |
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| 2014 |
Gokhman D, Lavi E, Prüfer K, Fraga MF, Riancho JA, Kelso J, Pääbo S, Meshorer E, Carmel L. Reconstructing the DNA methylation maps of the Neandertal and the Denisovan. Science (New York, N.Y.). 344: 523-7. PMID 24786081 DOI: 10.1126/Science.1250368 |
0.369 |
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| 2014 |
Castellano S, Parra G, Sánchez-Quinto FA, Racimo F, Kuhlwilm M, Kircher M, Sawyer S, Fu Q, Heinze A, Nickel B, Dabney J, Siebauer M, White L, Burbano HA, Renaud G, et al. Patterns of coding variation in the complete exomes of three Neandertals. Proceedings of the National Academy of Sciences of the United States of America. 111: 6666-71. PMID 24753607 DOI: 10.1073/Pnas.1405138111 |
0.739 |
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| 2014 |
Khrameeva EE, Bozek K, He L, Yan Z, Jiang X, Wei Y, Tang K, Gelfand MS, Prufer K, Kelso J, Paabo S, Giavalisco P, Lachmann M, Khaitovich P. Neanderthal ancestry drives evolution of lipid catabolism in contemporary Europeans. Nature Communications. 5: 3584. PMID 24690587 DOI: 10.1038/Ncomms4584 |
0.413 |
|
| 2014 |
Pääbo S. The human condition-a molecular approach. Cell. 157: 216-26. PMID 24679537 DOI: 10.1016/J.Cell.2013.12.036 |
0.381 |
|
| 2014 |
Wunderlich S, Kircher M, Vieth B, Haase A, Merkert S, Beier J, Göhring G, Glage S, Schambach A, Curnow EC, Pääbo S, Martin U, Enard W. Primate iPS cells as tools for evolutionary analyses. Stem Cell Research. 12: 622-9. PMID 24631741 DOI: 10.1016/J.Scr.2014.02.001 |
0.35 |
|
| 2014 |
Sankararaman S, Mallick S, Dannemann M, Prüfer K, Kelso J, Pääbo S, Patterson N, Reich D. The genomic landscape of Neanderthal ancestry in present-day humans. Nature. 507: 354-7. PMID 24476815 DOI: 10.1038/Nature12961 |
0.453 |
|
| 2014 |
Skoglund P, Northoff BH, Shunkov MV, Derevianko AP, Pääbo S, Krause J, Jakobsson M. Separating endogenous ancient DNA from modern day contamination in a Siberian Neandertal. Proceedings of the National Academy of Sciences of the United States of America. 111: 2229-34. PMID 24469802 DOI: 10.1073/Pnas.1318934111 |
0.642 |
|
| 2014 |
Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, Li H, Mallick S, Dannemann M, Fu Q, Kircher M, et al. The complete genome sequence of a Neanderthal from the Altai Mountains. Nature. 505: 43-9. PMID 24352235 DOI: 10.1038/Nature12886 |
0.434 |
|
| 2014 |
Meyer M, Fu Q, Aximu-Petri A, Glocke I, Nickel B, Arsuaga JL, Martínez I, Gracia A, de Castro JM, Carbonell E, Pääbo S. A mitochondrial genome sequence of a hominin from Sima de los Huesos. Nature. 505: 403-6. PMID 24305051 DOI: 10.1038/Nature12788 |
0.435 |
|
| 2013 |
Kuhlwilm M, Davierwala A, Pääbo S. Identification of putative target genes of the transcription factor RUNX2. Plos One. 8: e83218. PMID 24349465 DOI: 10.1371/Journal.Pone.0083218 |
0.401 |
|
| 2013 |
Thalmann O, Shapiro B, Cui P, Schuenemann VJ, Sawyer SK, Greenfield DL, Germonpré MB, Sablin MV, López-Giráldez F, Domingo-Roura X, Napierala H, Uerpmann HP, Loponte DM, Acosta AA, Giemsch L, et al. Complete mitochondrial genomes of ancient canids suggest a European origin of domestic dogs. Science (New York, N.Y.). 342: 871-4. PMID 24233726 DOI: 10.1126/Science.1243650 |
0.593 |
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| 2013 |
Dabney J, Knapp M, Glocke I, Gansauge MT, Weihmann A, Nickel B, Valdiosera C, García N, Pääbo S, Arsuaga JL, Meyer M. Complete mitochondrial genome sequence of a Middle Pleistocene cave bear reconstructed from ultrashort DNA fragments. Proceedings of the National Academy of Sciences of the United States of America. 110: 15758-63. PMID 24019490 DOI: 10.1073/Pnas.1314445110 |
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Dabney J, Meyer M, Pääbo S. Ancient DNA damage. Cold Spring Harbor Perspectives in Biology. 5. PMID 23729639 DOI: 10.1101/Cshperspect.A012567 |
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Fu Q, Mittnik A, Johnson PL, Bos K, Lari M, Bollongino R, Sun C, Giemsch L, Schmitz R, Burger J, Ronchitelli AM, Martini F, Cremonesi RG, Svoboda J, Bauer P, et al. A revised timescale for human evolution based on ancient mitochondrial genomes. Current Biology : Cb. 23: 553-9. PMID 23523248 DOI: 10.1016/J.Cub.2013.02.044 |
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Fu Q, Meyer M, Gao X, Stenzel U, Burbano HA, Kelso J, Pääbo S. DNA analysis of an early modern human from Tianyuan Cave, China. Proceedings of the National Academy of Sciences of the United States of America. 110: 2223-7. PMID 23341637 DOI: 10.1073/Pnas.1221359110 |
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Good JM, Wiebe V, Albert FW, Burbano HA, Kircher M, Green RE, Halbwax M, André C, Atencia R, Fischer A, Pääbo S. Comparative population genomics of the ejaculate in humans and the great apes. Molecular Biology and Evolution. 30: 964-76. PMID 23329688 DOI: 10.1093/Molbev/Mst005 |
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Maricic T, Günther V, Georgiev O, Gehre S, Curlin M, Schreiweis C, Naumann R, Burbano HA, Meyer M, Lalueza-Fox C, de la Rasilla M, Rosas A, Gajovic S, Kelso J, Enard W, et al. A recent evolutionary change affects a regulatory element in the human FOXP2 gene. Molecular Biology and Evolution. 30: 844-52. PMID 23197593 DOI: 10.1093/Molbev/Mss271 |
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Sankararaman S, Patterson N, Li H, Pääbo S, Reich D. The date of interbreeding between Neandertals and modern humans. Plos Genetics. 8: e1002947. PMID 23055938 DOI: 10.1371/Journal.Pgen.1002947 |
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Albert FW, Somel M, Carneiro M, Aximu-Petri A, Halbwax M, Thalmann O, Blanco-Aguiar JA, Plyusnina IZ, Trut L, Villafuerte R, Ferrand N, Kaiser S, Jensen P, Pääbo S. A comparison of brain gene expression levels in domesticated and wild animals. Plos Genetics. 8: e1002962. PMID 23028369 DOI: 10.1371/Journal.Pgen.1002962 |
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Meyer M, Kircher M, Gansauge MT, Li H, Racimo F, Mallick S, Schraiber JG, Jay F, Prüfer K, de Filippo C, Sudmant PH, Alkan C, Fu Q, Do R, Rohland N, et al. A high-coverage genome sequence from an archaic Denisovan individual. Science (New York, N.Y.). 338: 222-6. PMID 22936568 DOI: 10.1126/Science.1224344 |
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Langergraber KE, Prüfer K, Rowney C, Boesch C, Crockford C, Fawcett K, Inoue E, Inoue-Muruyama M, Mitani JC, Muller MN, Robbins MM, Schubert G, Stoinski TS, Viola B, Watts D, et al. Generation times in wild chimpanzees and gorillas suggest earlier divergence times in great ape and human evolution. Proceedings of the National Academy of Sciences of the United States of America. 109: 15716-21. PMID 22891323 DOI: 10.1073/Pnas.1211740109 |
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Fietz SA, Lachmann R, Brandl H, Kircher M, Samusik N, Schröder R, Lakshmanaperumal N, Henry I, Vogt J, Riehn A, Distler W, Nitsch R, Enard W, Pääbo S, Huttner WB. Transcriptomes of germinal zones of human and mouse fetal neocortex suggest a role of extracellular matrix in progenitor self-renewal. Proceedings of the National Academy of Sciences of the United States of America. 109: 11836-41. PMID 22753484 DOI: 10.1073/Pnas.1209647109 |
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Prüfer K, Munch K, Hellmann I, Akagi K, Miller JR, Walenz B, Koren S, Sutton G, Kodira C, Winer R, Knight JR, Mullikin JC, Meader SJ, Ponting CP, Lunter G, et al. The bonobo genome compared with the chimpanzee and human genomes. Nature. 486: 527-31. PMID 22722832 DOI: 10.1038/Nature11128 |
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Sawyer S, Krause J, Guschanski K, Savolainen V, Pääbo S. Temporal patterns of nucleotide misincorporations and DNA fragmentation in ancient DNA. Plos One. 7: e34131. PMID 22479540 DOI: 10.1371/Journal.Pone.0034131 |
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Fu Q, Rudan P, Pääbo S, Krause J. Complete mitochondrial genomes reveal neolithic expansion into Europe. Plos One. 7: e32473. PMID 22427842 DOI: 10.1371/Journal.Pone.0032473 |
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Burbano HA, Green RE, Maricic T, Lalueza-Fox C, de la Rasilla M, Rosas A, Kelso J, Pollard KS, Lachmann M, Pääbo S. Analysis of human accelerated DNA regions using archaic hominin genomes. Plos One. 7: e32877. PMID 22412940 DOI: 10.1371/Journal.Pone.0032877 |
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Liu X, Somel M, Tang L, Yan Z, Jiang X, Guo S, Yuan Y, He L, Oleksiak A, Zhang Y, Li N, Hu Y, Chen W, Qiu Z, Pääbo S, et al. Extension of cortical synaptic development distinguishes humans from chimpanzees and macaques. Genome Research. 22: 611-22. PMID 22300767 DOI: 10.1101/Gr.127324.111 |
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Somel M, Liu X, Tang L, Yan Z, Hu H, Guo S, Jiang X, Zhang X, Xu G, Xie G, Li N, Hu Y, Chen W, Pääbo S, Khaitovich P. MicroRNA-driven developmental remodeling in the brain distinguishes humans from other primates. Plos Biology. 9: e1001214. PMID 22162950 DOI: 10.1371/Journal.Pbio.1001214 |
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Nagaraj N, Wisniewski JR, Geiger T, Cox J, Kircher M, Kelso J, Pääbo S, Mann M. Deep proteome and transcriptome mapping of a human cancer cell line. Molecular Systems Biology. 7: 548. PMID 22068331 DOI: 10.1038/Msb.2011.81 |
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Hu HY, Guo S, Xi J, Yan Z, Fu N, Zhang X, Menzel C, Liang H, Yang H, Zhao M, Zeng R, Chen W, Pääbo S, Khaitovich P. MicroRNA expression and regulation in human, chimpanzee, and macaque brains. Plos Genetics. 7: e1002327. PMID 22022286 DOI: 10.1371/Journal.Pgen.1002327 |
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Brawand D, Soumillon M, Necsulea A, Julien P, Csárdi G, Harrigan P, Weier M, Liechti A, Aximu-Petri A, Kircher M, Albert FW, Zeller U, Khaitovich P, Grützner F, Bergmann S, et al. The evolution of gene expression levels in mammalian organs. Nature. 478: 343-8. PMID 22012392 DOI: 10.1038/Nature10532 |
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Reich D, Patterson N, Kircher M, Delfin F, Nandineni MR, Pugach I, Ko AM, Ko YC, Jinam TA, Phipps ME, Saitou N, Wollstein A, Kayser M, Pääbo S, Stoneking M. Denisova admixture and the first modern human dispersals into Southeast Asia and Oceania. American Journal of Human Genetics. 89: 516-28. PMID 21944045 DOI: 10.1016/J.Ajhg.2011.09.005 |
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Ka S, Albert FW, Denbow DM, Pääbo S, Siegel PB, Andersson L, Hallböök F. Differentially expressed genes in hypothalamus in relation to genomic regions under selection in two chicken lines resulting from divergent selection for high or low body weight. Neurogenetics. 12: 211-21. PMID 21748255 DOI: 10.1007/S10048-011-0290-9 |
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Fischer A, Prüfer K, Good JM, Halbwax M, Wiebe V, André C, Atencia R, Mugisha L, Ptak SE, Pääbo S. Bonobos fall within the genomic variation of chimpanzees. Plos One. 6: e21605. PMID 21747915 DOI: 10.1371/Journal.Pone.0021605 |
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Fu X, Giavalisco P, Liu X, Catchpole G, Fu N, Ning ZB, Guo S, Yan Z, Somel M, Pääbo S, Zeng R, Willmitzer L, Khaitovich P. Rapid metabolic evolution in human prefrontal cortex. Proceedings of the National Academy of Sciences of the United States of America. 108: 6181-6. PMID 21444806 DOI: 10.1073/Pnas.1019164108 |
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Albert FW, Hodges E, Jensen JD, Besnier F, Xuan Z, Rooks M, Bhattacharjee A, Brizuela L, Good JM, Green RE, Burbano HA, Plyusnina IZ, Trut L, Andersson L, Schöneberg T, et al. Targeted resequencing of a genomic region influencing tameness and aggression reveals multiple signals of positive selection. Heredity. 107: 205-14. PMID 21304545 DOI: 10.1038/Hdy.2011.4 |
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Reimers-Kipping S, Hevers W, Pääbo S, Enard W. Humanized Foxp2 specifically affects cortico-basal ganglia circuits. Neuroscience. 175: 75-84. PMID 21111790 DOI: 10.1016/J.Neuroscience.2010.11.042 |
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Gralle M, Pääbo S. A comprehensive functional analysis of ancestral human signal peptides. Molecular Biology and Evolution. 28: 25-8. PMID 20798139 DOI: 10.1093/Molbev/Msq223 |
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Reich D, Green RE, Kircher M, Krause J, Patterson N, Durand EY, Viola B, Briggs AW, Stenzel U, Johnson PL, Maricic T, Good JM, Marques-Bonet T, Alkan C, Fu Q, et al. Genetic history of an archaic hominin group from Denisova Cave in Siberia. Nature. 468: 1053-60. PMID 21179161 DOI: 10.1038/Nature09710 |
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Maricic T, Whitten M, Pääbo S. Multiplexed DNA sequence capture of mitochondrial genomes using PCR products. Plos One. 5: e14004. PMID 21103372 DOI: 10.1371/Journal.Pone.0014004 |
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Gralle M, Schäfer I, Seibel P, Pääbo S. A functional test of Neandertal and modern human mitochondrial targeting sequences. Biochemical and Biophysical Research Communications. 402: 747-9. PMID 20977882 DOI: 10.1016/J.Bbrc.2010.10.099 |
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Pulvers JN, Bryk J, Fish JL, Wilsch-Bräuninger M, Arai Y, Schreier D, Naumann R, Helppi J, Habermann B, Vogt J, Nitsch R, Tóth A, Enard W, Pääbo S, Huttner WB. Mutations in mouse Aspm (abnormal spindle-like microcephaly associated) cause not only microcephaly but also major defects in the germline. Proceedings of the National Academy of Sciences of the United States of America. 107: 16595-600. PMID 20823249 DOI: 10.1073/Pnas.1010494107 |
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Giger T, Khaitovich P, Somel M, Lorenc A, Lizano E, Harris LW, Ryan MM, Lan M, Wayland MT, Bahn S, Pääbo S. Evolution of neuronal and endothelial transcriptomes in primates. Genome Biology and Evolution. 2: 284-92. PMID 20624733 DOI: 10.1093/Gbe/Evq018 |
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Xu AG, He L, Li Z, Xu Y, Li M, Fu X, Yan Z, Yuan Y, Menzel C, Li N, Somel M, Hu H, Chen W, Pääbo S, Khaitovich P. Intergenic and repeat transcription in human, chimpanzee and macaque brains measured by RNA-Seq. Plos Computational Biology. 6: e1000843. PMID 20617162 DOI: 10.1371/Journal.Pcbi.1000843 |
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Burbano HA, Hodges E, Green RE, Briggs AW, Krause J, Meyer M, Good JM, Maricic T, Johnson PL, Xuan Z, Rooks M, Bhattacharjee A, Brizuela L, Albert FW, de la Rasilla M, et al. Targeted investigation of the Neandertal genome by array-based sequence capture. Science (New York, N.Y.). 328: 723-5. PMID 20448179 DOI: 10.1126/Science.1188046 |
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Green RE, Krause J, Briggs AW, Maricic T, Stenzel U, Kircher M, Patterson N, Li H, Zhai W, Fritz MH, Hansen NF, Durand EY, Malaspinas AS, Jensen JD, Marques-Bonet T, et al. A draft sequence of the Neandertal genome. Science (New York, N.Y.). 328: 710-22. PMID 20448178 DOI: 10.1126/Science.1188021 |
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Prüfer K, Stenzel U, Hofreiter M, Pääbo S, Kelso J, Green RE. Computational challenges in the analysis of ancient DNA. Genome Biology. 11: R47. PMID 20441577 DOI: 10.1186/Gb-2010-11-5-R47 |
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Krause J, Fu Q, Good JM, Viola B, Shunkov MV, Derevianko AP, Pääbo S. The complete mitochondrial DNA genome of an unknown hominin from southern Siberia. Nature. 464: 894-7. PMID 20336068 DOI: 10.1038/Nature08976 |
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Krause J, Briggs AW, Kircher M, Maricic T, Zwyns N, Derevianko A, Pääbo S. A complete mtDNA genome of an early modern human from Kostenki, Russia. Current Biology : Cb. 20: 231-6. PMID 20045327 DOI: 10.1016/J.Cub.2009.11.068 |
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Briggs AW, Stenzel U, Meyer M, Krause J, Kircher M, Pääbo S. Removal of deaminated cytosines and detection of in vivo methylation in ancient DNA. Nucleic Acids Research. 38: e87. PMID 20028723 DOI: 10.1093/Nar/Gkp1163 |
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Briggs AW, Good JM, Green RE, Krause J, Maricic T, Stenzel U, Pääbo S. Primer extension capture: targeted sequence retrieval from heavily degraded DNA sources. Journal of Visualized Experiments : Jove. 1573. PMID 19730410 DOI: 10.3791/1573 |
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Green RE, Briggs AW, Krause J, Prüfer K, Burbano HA, Siebauer M, Lachmann M, Pääbo S. The Neandertal genome and ancient DNA authenticity. The Embo Journal. 28: 2494-502. PMID 19661919 DOI: 10.1038/Emboj.2009.222 |
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Briggs AW, Good JM, Green RE, Krause J, Maricic T, Stenzel U, Lalueza-Fox C, Rudan P, Brajkovic D, Kucan Z, Gusic I, Schmitz R, Doronichev VB, Golovanova LV, de la Rasilla M, et al. Targeted retrieval and analysis of five Neandertal mtDNA genomes. Science (New York, N.Y.). 325: 318-21. PMID 19608918 DOI: 10.1126/Science.1174462 |
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Ptak SE, Enard W, Wiebe V, Hellmann I, Krause J, Lachmann M, Pääbo S. Linkage disequilibrium extends across putative selected sites in FOXP2. Molecular Biology and Evolution. 26: 2181-4. PMID 19608635 DOI: 10.1093/Molbev/Msp143 |
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Enard W, Gehre S, Hammerschmidt K, Hölter SM, Blass T, Somel M, Brückner MK, Schreiweis C, Winter C, Sohr R, Becker L, Wiebe V, Nickel B, Giger T, Müller U, et al. A humanized version of Foxp2 affects cortico-basal ganglia circuits in mice. Cell. 137: 961-71. PMID 19490899 DOI: 10.1016/J.Cell.2009.03.041 |
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Somel M, Franz H, Yan Z, Lorenc A, Guo S, Giger T, Kelso J, Nickel B, Dannemann M, Bahn S, Webster MJ, Weickert CS, Lachmann M, Pääbo S, Khaitovich P. Transcriptional neoteny in the human brain. Proceedings of the National Academy of Sciences of the United States of America. 106: 5743-8. PMID 19307592 DOI: 10.1073/Pnas.0900544106 |
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Maricic T, Pääbo S. Optimization of 454 sequencing library preparation from small amounts of DNA permits sequence determination of both DNA strands. Biotechniques. 46: 51-2, 54-7. PMID 19301622 DOI: 10.2144/000113042 |
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Green RE, Malaspinas AS, Krause J, Briggs AW, Johnson PL, Uhler C, Meyer M, Good JM, Maricic T, Stenzel U, Prüfer K, Siebauer M, Burbano HA, Ronan M, Rothberg JM, et al. A complete Neandertal mitochondrial genome sequence determined by high-throughput sequencing. Cell. 134: 416-26. PMID 18692465 DOI: 10.1016/J.Cell.2008.06.021 |
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Khaitovich P, Lockstone HE, Wayland MT, Tsang TM, Jayatilaka SD, Guo AJ, Zhou J, Somel M, Harris LW, Holmes E, Pääbo S, Bahn S. Metabolic changes in schizophrenia and human brain evolution. Genome Biology. 9: R124. PMID 18681948 DOI: 10.1186/Gb-2008-9-8-R124 |
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Krause J, Unger T, Noçon A, Malaspinas AS, Kolokotronis SO, Stiller M, Soibelzon L, Spriggs H, Dear PH, Briggs AW, Bray SC, O'Brien SJ, Rabeder G, Matheus P, Cooper A, et al. Mitochondrial genomes reveal an explosive radiation of extinct and extant bears near the Miocene-Pliocene boundary. Bmc Evolutionary Biology. 8: 220. PMID 18662376 DOI: 10.1186/1471-2148-8-220 |
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Somel M, Creely H, Franz H, Mueller U, Lachmann M, Khaitovich P, Pääbo S. Human and chimpanzee gene expression differences replicated in mice fed different diets. Plos One. 3: e1504. PMID 18231591 DOI: 10.1371/Journal.Pone.0001504 |
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Meyer M, Briggs AW, Maricic T, Höber B, Höffner B, Krause J, Weihmann A, Pääbo S, Hofreiter M. From micrograms to picograms: quantitative PCR reduces the material demands of high-throughput sequencing. Nucleic Acids Research. 36: e5. PMID 18084031 DOI: 10.1093/Nar/Gkm1095 |
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Krause J, Lalueza-Fox C, Orlando L, Enard W, Green RE, Burbano HA, Hublin JJ, Hänni C, Fortea J, de la Rasilla M, Bertranpetit J, Rosas A, Pääbo S. The derived FOXP2 variant of modern humans was shared with Neandertals. Current Biology : Cb. 17: 1908-12. PMID 17949978 DOI: 10.1016/J.Cub.2007.10.008 |
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Krause J, Orlando L, Serre D, Viola B, Prüfer K, Richards MP, Hublin JJ, Hänni C, Derevianko AP, Pääbo S. Neanderthals in central Asia and Siberia. Nature. 449: 902-4. PMID 17914357 DOI: 10.1038/Nature06193 |
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Briggs AW, Stenzel U, Johnson PL, Green RE, Kelso J, Prüfer K, Meyer M, Krause J, Ronan MT, Lachmann M, Pääbo S. Patterns of damage in genomic DNA sequences from a Neandertal. Proceedings of the National Academy of Sciences of the United States of America. 104: 14616-21. PMID 17715061 DOI: 10.1073/Pnas.0704665104 |
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d'Abbadie M, Hofreiter M, Vaisman A, Loakes D, Gasparutto D, Cadet J, Woodgate R, Pääbo S, Holliger P. Molecular breeding of polymerases for amplification of ancient DNA. Nature Biotechnology. 25: 939-43. PMID 17632524 DOI: 10.1038/Nbt1321 |
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Chen H, Green RE, Pääbo S, Slatkin M. The joint allele-frequency spectrum in closely related species. Genetics. 177: 387-98. PMID 17603120 DOI: 10.1534/Genetics.107.070730 |
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Weber M, Hellmann I, Stadler MB, Ramos L, Pääbo S, Rebhan M, Schübeler D. Distribution, silencing potential and evolutionary impact of promoter DNA methylation in the human genome. Nature Genetics. 39: 457-66. PMID 17334365 DOI: 10.1038/Ng1990 |
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Hofreiter M, Münzel S, Conard NJ, Pollack J, Slatkin M, Weiss G, Pääbo S. Sudden replacement of cave bear mitochondrial DNA in the late Pleistocene. Current Biology : Cb. 17: R122-3. PMID 17307042 DOI: 10.1016/J.Cub.2007.01.026 |
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Prüfer K, Muetzel B, Do HH, Weiss G, Khaitovich P, Rahm E, Pääbo S, Lachmann M, Enard W. FUNC: a package for detecting significant associations between gene sets and ontological annotations. Bmc Bioinformatics. 8: 41. PMID 17284313 DOI: 10.1186/1471-2105-8-41 |
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Thalmann O, Fischer A, Lankester F, Pääbo S, Vigilant L. The complex evolutionary history of gorillas: insights from genomic data. Molecular Biology and Evolution. 24: 146-58. PMID 17065595 DOI: 10.1093/Molbev/Msl160 |
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Noonan JP, Coop G, Kudaravalli S, Smith D, Krause J, Alessi J, Chen F, Platt D, Pääbo S, Pritchard JK, Rubin EM. Sequencing and analysis of Neanderthal genomic DNA. Science (New York, N.Y.). 314: 1113-8. PMID 17110569 DOI: 10.1126/Science.1131412 |
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Green RE, Krause J, Ptak SE, Briggs AW, Ronan MT, Simons JF, Du L, Egholm M, Rothberg JM, Paunovic M, Pääbo S. Analysis of one million base pairs of Neanderthal DNA. Nature. 444: 330-6. PMID 17108958 DOI: 10.1038/Nature05336 |
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Prabhakar S, Noonan JP, Pääbo S, Rubin EM. Accelerated evolution of conserved noncoding sequences in humans. Science (New York, N.Y.). 314: 786. PMID 17082449 DOI: 10.1126/Science.1130738 |
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Khaitovich P, Kelso J, Franz H, Visagie J, Giger T, Joerchel S, Petzold E, Green RE, Lachmann M, Pääbo S. Functionality of intergenic transcription: an evolutionary comparison. Plos Genetics. 2: e171. PMID 17040132 DOI: 10.1371/Journal.Pgen.0020171 |
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Stiller M, Green RE, Ronan M, Simons JF, Du L, He W, Egholm M, Rothberg JM, Keates SG, Keats SG, Ovodov ND, Antipina EE, Baryshnikov GF, Kuzmin YV, Vasilevski AA, et al. Patterns of nucleotide misincorporations during enzymatic amplification and direct large-scale sequencing of ancient DNA. Proceedings of the National Academy of Sciences of the United States of America. 103: 13578-84. PMID 16938852 DOI: 10.1073/Pnas.0605327103 |
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Khaitovich P, Enard W, Lachmann M, Pääbo S. Evolution of primate gene expression. Nature Reviews. Genetics. 7: 693-702. PMID 16921347 DOI: 10.1038/Nrg1940 |
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Lalueza-Fox C, Krause J, Caramelli D, Catalano G, Milani L, Sampietro ML, Calafell F, Martínez-Maza C, Bastir M, García-Tabernero A, de la Rasilla M, Fortea J, Pääbo S, Bertranpetit J, Rosas A. Mitochondrial DNA of an Iberian Neandertal suggests a population affinity with other European Neandertals. Current Biology : Cb. 16: R629-30. PMID 16920606 DOI: 10.1016/J.Cub.2006.07.044 |
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Fischer A, Pollack J, Thalmann O, Nickel B, Pääbo S. Demographic history and genetic differentiation in apes. Current Biology : Cb. 16: 1133-8. PMID 16753568 DOI: 10.1016/J.Cub.2006.04.033 |
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Stroud JC, Wu Y, Bates DL, Han A, Nowick K, Paabo S, Tong H, Chen L. Structure of the forkhead domain of FOXP2 bound to DNA. Structure (London, England : 1993). 14: 159-66. PMID 16407075 DOI: 10.1016/J.Str.2005.10.005 |
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Krause J, Dear PH, Pollack JL, Slatkin M, Spriggs H, Barnes I, Lister AM, Ebersberger I, Pääbo S, Hofreiter M. Multiplex amplification of the mammoth mitochondrial genome and the evolution of Elephantidae. Nature. 439: 724-7. PMID 16362058 DOI: 10.1038/Nature04432 |
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Franz H, Ullmann C, Becker A, Ryan M, Bahn S, Arendt T, Simon M, Pääbo S, Khaitovich P. Systematic analysis of gene expression in human brains before and after death. Genome Biology. 6: R112. PMID 16420671 DOI: 10.1186/Gb-2005-6-13-R112 |
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Khaitovich P, Hellmann I, Enard W, Nowick K, Leinweber M, Franz H, Weiss G, Lachmann M, Pääbo S. Parallel patterns of evolution in the genomes and transcriptomes of humans and chimpanzees. Science (New York, N.Y.). 309: 1850-4. PMID 16141373 DOI: 10.1126/Science.1108296 |
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Hellmann I, Prüfer K, Ji H, Zody MC, Pääbo S, Ptak SE. Why do human diversity levels vary at a megabase scale? Genome Research. 15: 1222-31. PMID 16140990 DOI: 10.1101/Gr.3461105 |
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Cheng Z, Ventura M, She X, Khaitovich P, Graves T, Osoegawa K, Church D, DeJong P, Wilson RK, Pääbo S, Rocchi M, Eichler EE. A genome-wide comparison of recent chimpanzee and human segmental duplications. Nature. 437: 88-93. PMID 16136132 DOI: 10.1038/Nature04000 |
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Mikkelsen TS, Hillier LW, Eichler EE, Zody MC, Jaffe DB, Yang S, Enard W, Hellmann I, Lindblad-Toh K, Altheide TK, Archidiacono N, Bork P, Butler J, Chang JL, Cheng Z, et al. Initial sequence of the chimpanzee genome and comparison with the human genome Nature. 437: 69-87. PMID 16136131 DOI: 10.1038/Nature04072 |
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| 2005 |
Rohland N, Pollack JL, Nagel D, Beauval C, Airvaux J, Pääbo S, Hofreiter M. The Population History of Extant and Extinct Hyenas Molecular Biology and Evolution. 22: 2435-2443. PMID 16120805 DOI: 10.1093/Molbev/Msi244 |
0.459 |
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| 2005 |
Fraser HB, Khaitovich P, Plotkin JB, Pääbo S, Eisen MB. Aging and gene expression in the primate brain. Plos Biology. 3: e274. PMID 16048372 DOI: 10.1371/Journal.Pbio.0030274 |
0.356 |
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| 2005 |
Heissig F, Krause J, Bryk J, Khaitovich P, Enard W, Pääbo S. Functional analysis of human and chimpanzee promoters. Genome Biology. 6: R57. PMID 15998446 DOI: 10.1186/Gb-2005-6-7-R57 |
0.581 |
|
| 2005 |
Römpler H, Schulz A, Pitra C, Coop G, Przeworski M, Pääbo S, Schöneberg T. The rise and fall of the chemoattractant receptor GPR33. The Journal of Biological Chemistry. 280: 31068-75. PMID 15987686 DOI: 10.1074/Jbc.M503586200 |
0.36 |
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| 2005 |
Noonan JP, Hofreiter M, Smith D, Priest JR, Rohland N, Rabeder G, Krause J, Detter JC, Pääbo S, Rubin EM. Genomic sequencing of Pleistocene cave bears. Science (New York, N.Y.). 309: 597-9. PMID 15933159 DOI: 10.1126/Science.1113485 |
0.601 |
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| 2005 |
Beauval C, Maureille B, Lacrampe-Cuyaubère F, Serre D, Peressinotto D, Bordes JG, Cochard D, Couchoud I, Dubrasquet D, Laroulandie V, Lenoble A, Mallye JB, Pasty S, Primault J, Rohland N, et al. A late Neandertal femur from Les Rochers-de-Villeneuve, France. Proceedings of the National Academy of Sciences of the United States of America. 102: 7085-90. PMID 15878988 DOI: 10.1073/Pnas.0502656102 |
0.369 |
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| 2005 |
Khaitovich P, Pääbo S, Weiss G. Toward a Neutral Evolutionary Model of Gene Expression Genetics. 170: 929-939. PMID 15834146 DOI: 10.1534/Genetics.104.037135 |
0.318 |
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| 2005 |
Yohn CT, Jiang Z, McGrath SD, Hayden KE, Khaitovich P, Johnson ME, Eichler MY, McPherson JD, Zhao S, Pääbo S, Eichler EE. Lineage-specific expansions of retroviral insertions within the genomes of African great apes but not humans and orangutans. Plos Biology. 3: e110. PMID 15737067 DOI: 10.1371/Journal.Pbio.0030110 |
0.463 |
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| 2005 |
Ptak SE, Hinds DA, Koehler K, Nickel B, Patil N, Ballinger DG, Przeworski M, Frazer KA, Pääbo S. Fine-scale recombination patterns differ between chimpanzees and humans. Nature Genetics. 37: 429-34. PMID 15723063 DOI: 10.1038/Ng1529 |
0.349 |
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| 2005 |
Laan M, Wiebe V, Khusnutdinova E, Remm M, Pääbo S. X-chromosome as a marker for population history: Linkage disequilibrium and haplotype study in Eurasian populations European Journal of Human Genetics. 13: 452-462. PMID 15657606 DOI: 10.1038/Sj.Ejhg.5201340 |
0.323 |
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| 2005 |
Fischer A, Gilad Y, Man O, Pääbo S. Evolution of bitter taste receptors in humans and apes. Molecular Biology and Evolution. 22: 432-6. PMID 15496549 DOI: 10.1093/Molbev/Msi027 |
0.323 |
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| 2005 |
Ptak SE, Hinds DA, Koehler K, Nickel B, Patil N, Ballinger DG, Przeworski M, Frazer KA, Pääbo S. Erratum: Corrigendum: Fine-scale recombination patterns differ between chimpanzees and humans Nature Genetics. 37: 445-445. DOI: 10.1038/Ng0405-445 |
0.326 |
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| 2004 |
Pääbo S, Poinar H, Serre D, Jaenicke-Despres V, Hebler J, Rohland N, Kuch M, Krause J, Vigilant L, Hofreiter M. Genetic analyses from ancient DNA. Annual Review of Genetics. 38: 645-79. PMID 15568989 DOI: 10.1146/Annurev.Genet.37.110801.143214 |
0.608 |
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| 2004 |
Enard W, Pääbo S. Comparative Primate Genomics Annual Review of Genomics and Human Genetics. 5: 351-378. PMID 15485353 DOI: 10.1146/Annurev.Genom.5.061903.180040 |
0.406 |
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| 2004 |
Serre D, Pääbo S. Evidence for gradients of human genetic diversity within and among continents Genome Research. 14: 1679-1685. PMID 15342553 DOI: 10.1101/Gr.2529604 |
0.348 |
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| 2004 |
Hofreiter M, Serre D, Rohland N, Rabeder G, Nagel D, Conard NJ, Münzel S, Pääbo S. Lack of phylogeography in European mammals before the last glaciation. Proceedings of the National Academy of Sciences of the United States of America. 101: 12963-12968. PMID 15317936 DOI: 10.1073/Pnas.0403618101 |
0.391 |
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| 2004 |
Khaitovich P, Muetzel B, She X, Lachmann M, Hellmann I, Dietzsch J, Steigele S, Do HH, Weiss G, Enard W, Heissig F, Arendt T, Nieselt-Struwe K, Eichler EE, Pääbo S. Regional patterns of gene expression in human and chimpanzee brains. Genome Research. 14: 1462-73. PMID 15289471 DOI: 10.1101/Gr.2538704 |
0.356 |
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| 2004 |
Ptak SE, Roeder AD, Stephens M, Gilad Y, Pääbo S, Przeworski M. Absence of the TAP2 human recombination hotspot in chimpanzees. Plos Biology. 2: e155. PMID 15208713 DOI: 10.1371/Journal.Pbio.0020155 |
0.409 |
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| 2004 |
Watanabe H, Fujiyama A, Hattori M, Taylor TD, Toyoda A, Kuroki Y, Noguchi H, BenKahla A, Lehrach H, Sudbrak R, Kube M, Taenzer S, Galgoczy P, Platzer M, Scharfe M, et al. DNA sequence and comparative analysis of chimpanzee chromosome 22. Nature. 429: 382-8. PMID 15164055 DOI: 10.1038/Nature02564 |
0.457 |
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| 2004 |
Khaitovich P, Weiss G, Lachmann M, Hellmann I, Enard W, Muetzel B, Wirkner U, Ansorge W, Pääbo S. A neutral model of transcriptome evolution. Plos Biology. 2: 682-689. PMID 15138501 DOI: 10.1371/Journal.Pbio.0020132 |
0.308 |
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| 2004 |
Serre D, Hofreiter M, Pääbo S. Mutations Induced by Ancient DNA Extracts Molecular Biology and Evolution. 21: 1463-1467. PMID 15084676 DOI: 10.1093/Molbev/Msh139 |
0.348 |
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| 2004 |
Serre D, Langaney A, Chech M, Teschler-Nicola M, Paunovic M, Mennecier P, Hofreiter M, Possnert G, Pääbo S. No evidence of Neandertal mtDNA contribution to early modern humans. Plos Biology. 2: E57. PMID 15024415 DOI: 10.1371/Journal.Pbio.0020057 |
0.5 |
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| 2004 |
Fischer A, Wiebe V, Pääbo S, Przeworski M. Evidence for a complex demographic history of chimpanzees. Molecular Biology and Evolution. 21: 799-808. PMID 14963091 DOI: 10.1093/Molbev/Msh083 |
0.485 |
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| 2004 |
Gilad Y, Wiebe V, Przeworski M, Lancet D, Pääbo S. Loss of olfactory receptor genes coincides with the acquisition of full trichromatic vision in primates. Plos Biology. 2: E5. PMID 14737185 DOI: 10.1371/Journal.Pbio.0020005 |
0.324 |
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| 2004 |
Thalmann O, Hebler J, Poinar HN, Pääbo S, Vigilant L. Unreliable mtDNA data due to nuclear insertions: a cautionary tale from analysis of humans and other great apes Molecular Ecology. 13: 321-335. PMID 14717890 DOI: 10.1046/J.1365-294X.2003.02070.X |
0.467 |
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| 2004 |
Enard W, Fassbender A, Model F, Adorján P, Pääbo S, Olek A. Differences in DNA methylation patterns between humans and chimpanzees Current Biology. 14. DOI: 10.1016/J.Cub.2004.01.042 |
0.364 |
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| 2003 |
Sakaki Y, Watanabe H, Taylor T, Hattori M, Fujiyama A, Toyoda A, Kuroki Y, Itoh T, Saitou N, Oota S, Kim CG, Kitano T, Lehrach H, Yaspo ML, Sudbrak R, et al. Human versus chimpanzee chromosome-wide sequence comparison and its evolutionary implication. Cold Spring Harbor Symposia On Quantitative Biology. 68: 455-60. PMID 15338648 DOI: 10.1101/Sqb.2003.68.455 |
0.394 |
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| 2003 |
Jaenicke-Després V, Buckler ES, Smith BD, Gilbert MT, Cooper A, Doebley J, Pääbo S. Early allelic selection in maize as revealed by ancient DNA. Science (New York, N.Y.). 302: 1206-8. PMID 14615538 DOI: 10.1126/Science.1089056 |
0.358 |
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| 2003 |
Motz M, Sagner G, Pääbo S, Kilger C. Sequential DEXAS: A method for obtaining DNA sequences from genomic DNA and blood in one reaction Nucleic Acids Research. 31: 1-8. PMID 14530454 DOI: 10.1093/Nar/Gng112 |
0.419 |
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| 2003 |
Gilad Y, Bustamante CD, Lancet D, Pääbo S. Natural selection on the olfactory receptor gene family in humans and chimpanzees. American Journal of Human Genetics. 73: 489-501. PMID 12908129 DOI: 10.1086/378132 |
0.387 |
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| 2003 |
Poinar HN, Kuch M, McDonald HG, Martin PS, Pääbo S. Nuclear Gene Sequences from a Late Pleistocene Sloth Coprolite Current Biology. 13: 1150-1152. PMID 12842016 DOI: 10.1016/S0960-9822(03)00450-0 |
0.443 |
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| 2003 |
Kitano T, Schwarz C, Nickel B, Pääbo S. Gene diversity patterns at 10 X-chromosomal loci in humans and chimpanzees. Molecular Biology and Evolution. 20: 1281-9. PMID 12777533 DOI: 10.1093/Molbev/Msg134 |
0.437 |
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| 2003 |
Hellmann I, Ebersberger I, Ptak SE, Pääbo S, Przeworski M. A neutral explanation for the correlation of diversity with recombination rates in humans. American Journal of Human Genetics. 72: 1527-35. PMID 12740762 DOI: 10.1086/375657 |
0.384 |
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| 2003 |
Hellmann I, Zollner S, Enard W, Ebersberger I, Nickel B, Paabo S. Selection on human genes as revealed by comparisons to chimpanzee cDNA. Genome Research. 13: 831-7. PMID 12727903 DOI: 10.1101/Gr.944903 |
0.489 |
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| 2003 |
Gilad Y, Man O, Pääbo S, Lancet D. Human specific loss of olfactory receptor genes. Proceedings of the National Academy of Sciences of the United States of America. 100: 3324-7. PMID 12612342 DOI: 10.1073/Pnas.0535697100 |
0.397 |
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| 2003 |
Pääbo S. The mosaic that is our genome Nature. 421: 409-412. PMID 12540910 DOI: 10.1038/Nature01400 |
0.36 |
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| 2003 |
Otte K, Kranz H, Kober I, Thompson P, Hoefer M, Haubold B, Remmel B, Voss H, Kaiser C, Albers M, Cheruvallath Z, Jackson D, Casari G, Koegl M, Pääbo S, et al. Identification of farnesoid X receptor beta as a novel mammalian nuclear receptor sensing lanosterol. Molecular and Cellular Biology. 23: 864-72. PMID 12529392 DOI: 10.1128/Mcb.23.3.864-872.2003 |
0.368 |
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| 2002 |
Schmitz RW, Serre D, Bonani G, Feine S, Hillgruber F, Krainitzki H, Pääbo S, Smith FH. The Neandertal type site revisited: interdisciplinary investigations of skeletal remains from the Neander Valley, Germany. Proceedings of the National Academy of Sciences of the United States of America. 99: 13342-7. PMID 12232049 DOI: 10.1073/Pnas.192464099 |
0.419 |
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| 2002 |
Enard W, Przeworski M, Fisher SE, Lai CS, Wiebe V, Kitano T, Monaco AP, Pääbo S. Molecular evolution of FOXP2, a gene involved in speech and language. Nature. 418: 869-72. PMID 12192408 DOI: 10.1038/Nature01025 |
0.39 |
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| 2002 |
Chou HH, Hayakawa T, Diaz S, Krings M, Indriati E, Leakey M, Paabo S, Satta Y, Takahata N, Varki A. Inactivation of CMP-N-acetylneuraminic acid hydroxylase occurred prior to brain expansion during human evolution. Proceedings of the National Academy of Sciences of the United States of America. 99: 11736-41. PMID 12192086 DOI: 10.1073/Pnas.182257399 |
0.386 |
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| 2002 |
Hofreiter M, Capelli C, Krings M, Waits L, Conard N, Münzel S, Rabeder G, Nagel D, Paunovic M, Jambresić G, Meyer S, Weiss G, Pääbo S. Ancient DNA Analyses Reveal High Mitochondrial DNA Sequence Diversity and Parallel Morphological Evolution of Late Pleistocene Cave Bears Molecular Biology and Evolution. 19: 1244-1250. PMID 12140236 DOI: 10.1093/Oxfordjournals.Molbev.A004185 |
0.438 |
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| 2002 |
Ebersberger I, Metzler D, Schwarz C, Pääbo S. Genomewide comparison of DNA sequences between humans and chimpanzees. American Journal of Human Genetics. 70: 1490-7. PMID 11992255 DOI: 10.1086/340787 |
0.472 |
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| 2002 |
Enard W, Khaitovich P, Klose J, Zöllner S, Heissig F, Giavalisco P, Nieselt-Struwe K, Muchmore E, Varki A, Ravid R, Doxiadis GM, Bontrop RE, Pääbo S. Intra- and interspecific variation in primate gene expression patterns. Science (New York, N.Y.). 296: 340-3. PMID 11951044 DOI: 10.1126/Science.1068996 |
0.426 |
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| 2002 |
Kaessmann H, Pääbo S. The genetical history of humans and the great apes Journal of Internal Medicine. 251: 1-18. PMID 11851860 DOI: 10.1046/J.1365-2796.2002.00907.X |
0.372 |
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| 2002 |
Kaessmann H, Zöllner S, Gustafsson AC, Wiebe V, Laan M, Lundeberg J, Uhlén M, Pääbo S. Extensive linkage disequilibrium in small human populations in Eurasia. American Journal of Human Genetics. 70: 673-85. PMID 11813132 DOI: 10.1086/339258 |
0.36 |
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| 2001 |
Hofreiter M, Jaenicke V, Serre D, Haeseler Av, Pääbo S. DNA sequences from multiple amplifications reveal artifacts induced by cytosine deamination in ancient DNA Nucleic Acids Research. 29: 4793-4799. PMID 11726688 DOI: 10.1093/Nar/29.23.4793 |
0.391 |
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| 2001 |
Dörner M, Altmann M, Pääbo S, Mörl M. Evidence for Import of a Lysyl-tRNA into Marsupial Mitochondria Molecular Biology of the Cell. 12: 2688-2698. PMID 11553708 DOI: 10.1091/Mbc.12.9.2688 |
0.373 |
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| 2001 |
Poinar HN, Kuch M, Sobolik KD, Barnes I, Stankiewicz AB, Kuder T, Spaulding WG, Bryant VM, Cooper A, Pääbo S. A molecular analysis of dietary diversity for three archaic native americans Proceedings of the National Academy of Sciences of the United States of America. 98: 4317-4322. PMID 11296282 DOI: 10.1073/Pnas.061014798 |
0.45 |
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| 2001 |
Pääbo S. The human genome and our view of ourselves Science. 291: 1219-1220. PMID 11233444 DOI: 10.1126/Science.1056972 |
0.425 |
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| 2001 |
Kaessmann H, Wiebe V, Weiss G, Pääbo S. Great ape DNA sequences reveal a reduced diversity and an expansion in humans. Nature Genetics. 27: 155-156. PMID 11175781 DOI: 10.1038/84773 |
0.482 |
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| 2001 |
Greenwood AD, Castresana J, Feldmaier-Fuchs G, Pääbo S. A molecular phylogeny of two extinct sloths. Molecular Phylogenetics and Evolution. 18: 94-103. PMID 11161746 DOI: 10.1006/Mpev.2000.0860 |
0.4 |
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| 2001 |
Kaessmann H, Heissig F, Wiebe V, Von Haeseler A, Paabo S. DNA sequence variation on the X chromosome of humans and great apes Pathologie Biologie. 49: 394. DOI: 10.1016/S0369-8114(01)00185-7 |
0.402 |
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| 2000 |
Ingman M, Kaessmann H, Pääbo S, Gyllensten U. Mitochondrial genome variation and the origin of modern humans Nature. 408: 708-713. PMID 11130070 DOI: 10.1038/35047064 |
0.464 |
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| 2000 |
Hofreiter M, Poinar HN, Spaulding WG, Bauer K, Martin PS, Possnert G, Pääbo S. A molecular analysis of ground sloth diet through the last glaciation. Molecular Ecology. 9: 1975-84. PMID 11123610 DOI: 10.1046/J.1365-294X.2000.01106.X |
0.418 |
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| 2000 |
Di Benedetto G, Nasidze IS, Stenico M, Nigro L, Krings M, Lanzinger M, Vigilant L, Stoneking M, Pääbo S, Barbujani G. Mitochondrial DNA sequences in prehistoric human remains from the Alps European Journal of Human Genetics. 8: 669-677. PMID 10980572 DOI: 10.1038/Sj.Ejhg.5200514 |
0.636 |
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| 2000 |
Motz M, Paabo S, Kilger C. Improved cycle sequencing of GC-rich templates by a combination of nucleotide analogs Biotechniques. 29: 268-270. PMID 10948427 DOI: 10.2144/00292St01 |
0.38 |
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| 2000 |
Paabo S. Of bears, conservation genetics, and the value of time travel Proceedings of the National Academy of Sciences of the United States of America. 97: 1320-1321. PMID 10677456 DOI: 10.1073/Pnas.97.4.1320 |
0.365 |
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| 1999 |
Greenwood AD, Capelli C, Possnert G, Pääbo S. Nuclear DNA sequences from late Pleistocene megafauna. Molecular Biology and Evolution. 16: 1466-73. PMID 10555277 DOI: 10.1093/Oxfordjournals.Molbev.A026058 |
0.455 |
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| 1999 |
Kaessmann H, Wiebe V, Pääbo S. Extensive Nuclear DNA Sequence Diversity Among Chimpanzees Science. 286: 1159-1162. PMID 10550054 DOI: 10.1126/Science.286.5442.1159 |
0.464 |
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| 1999 |
Kaessmann H, Heißig F, Haeseler Av, Pääbo S. DNA sequence variation in a non-coding region of low recombination on the human X chromosome Nature Genetics. 22: 78-81. PMID 10319866 DOI: 10.1038/8785 |
0.462 |
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| 1999 |
Krings M, Geisert H, Schmitz RW, Krainitzki H, Pääbo S. DNA sequence of the mitochondrial hypervariable region II from the neandertal type specimen. Proceedings of the National Academy of Sciences of the United States of America. 96: 5581-5. PMID 10318927 DOI: 10.1073/Pnas.96.10.5581 |
0.475 |
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| 1999 |
Krings M, Salem AE, Bauer K, Geisert H, Malek AK, Chaix L, Simon C, Welsby D, Di Rienzo A, Utermann G, Sajantila A, Pääbo S, Stoneking M. mtDNA analysis of Nile River Valley populations: A genetic corridor or a barrier to migration? American Journal of Human Genetics. 64: 1166-76. PMID 10090902 DOI: 10.1086/302314 |
0.694 |
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| 1999 |
Greenwood AD, Pääbo S. Nuclear insertion sequences of mitochondrial DNA predominate in hair but not in blood of elephants. Molecular Ecology. 8: 133-7. PMID 9919702 DOI: 10.1046/J.1365-294X.1999.00507.X |
0.408 |
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| 1998 |
Gravlund P, Meldgaard M, Pääbo S, Arctander P. Polyphyletic Origin of the Small-Bodied, High-Arctic Subspecies of Tundra Reindeer (Rangifer tarandus) Molecular Phylogenetics and Evolution. 10: 151-159. PMID 9878226 DOI: 10.1006/Mpev.1998.0525 |
0.306 |
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| 1998 |
Cao Y, Janke A, Waddell PJ, Westerman M, Takenaka O, Murata S, Okada N, Pääbo S, Hasegawa M. Conflict among individual mitochondrial proteins in resolving the phylogeny of eutherian orders. Journal of Molecular Evolution. 47: 307-322. PMID 9732458 DOI: 10.1007/Pl00006389 |
0.367 |
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| 1998 |
Poinar HN, Hofreiter M, Spaulding WG, Martin PS, Stankiewicz BA, Bland H, Evershed RP, Possnert G, Pääbo S. Molecular coproscopy: dung and diet of the extinct ground sloth Nothrotheriops shastensis. Science (New York, N.Y.). 281: 402-6. PMID 9665881 DOI: 10.1126/Science.281.5375.402 |
0.376 |
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| 1998 |
Terwilliger JD, Zöllner S, Laan M, Pääbo S. Mapping Genes through the Use of Linkage Disequilibrium Generated by Genetic Drift: ‘Drift Mapping’ in Small Populations with No Demographic Expansion Human Heredity. 48: 138-154. PMID 9618061 DOI: 10.1159/000022794 |
0.301 |
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| 1998 |
Castresana J, Feldmaier-Fuchs G, Pääbo S. Codon reassignment and amino acid composition in hemichordate mitochondria Proceedings of the National Academy of Sciences of the United States of America. 95: 3703-3707. PMID 9520430 DOI: 10.1073/Pnas.95.7.3703 |
0.362 |
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| 1998 |
Allen M, Engström A, Meyers S, Handt O, Saldeen T, Haeseler Av, Pääbo S, Gyllensten U. Mitochondrial DNA sequencing of shed hairs and saliva on robbery caps: Sensitivity and matching probabilities Journal of Forensic Sciences. 43: 453-464. DOI: 10.1520/Jfs16169J |
0.434 |
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| 1997 |
Laan M, Pääbo S. Demographic history and linkage disequilibrium in human populations. Nature Genetics. 17: 435-438. PMID 9398845 DOI: 10.1038/Ng1297-435 |
0.35 |
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| 1997 |
Benes V, Kilger C, Voss H, Pääbo S, Ansorge W. Direct Primer Walking on P1 Plasmid DNA Biotechniques. 23: 98-100. PMID 9232238 DOI: 10.2144/97231Bm21 |
0.318 |
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| 1997 |
Krings M, Stone A, Schmitz RW, Krainitzki H, Stoneking M, Pääbo S. Neandertal DNA sequences and the origin of modern humans. Cell. 90: 19-30. PMID 9230299 DOI: 10.1016/S0092-8674(00)80310-4 |
0.644 |
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| 1997 |
Börner GV, Yokobori SI, Mörl M, Dörner M, Pääbo S. RNA editing in metazoan mitochondria: staying fit without sex Febs Letters. 409: 320-324. PMID 9224682 DOI: 10.1016/S0014-5793(97)00357-8 |
0.306 |
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| 1997 |
Kilger C, Pääbo S. Direct DNA sequence determination from total genomic DNA Nucleic Acids Research. 25: 2032-2034. PMID 9115374 DOI: 10.1093/Nar/25.10.2032 |
0.437 |
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| 1997 |
Kilger C, Pääbo S. Direct exponential amplification and sequencing (DEXAS) of genomic DNA Biological Chemistry Hoppe-Seyler. 378: 99-105. PMID 9088538 DOI: 10.1515/Bchm.1997.378.2.99 |
0.43 |
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| 1997 |
Kilger C, Krings M, Poinar H, Pääbo S. Colony sequencing : Direct sequencing of plasmid DNA from bacterial colonies Biotechniques. 22: 412-418. PMID 9067011 DOI: 10.2144/97223Bm08 |
0.408 |
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| 1997 |
Yokobori S, Pääbo S. Polyadenylation creates the discriminator nucleotide of chicken mitochondrial tRNA Tyr Journal of Molecular Biology. 265: 95-99. PMID 9020972 DOI: 10.1006/Jmbi.1996.0728 |
0.409 |
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| 1996 |
Stone AC, Milner GR, Pääbo S, Stoneking M. Sex determination of ancient human skeletons using DNA. American Journal of Physical Anthropology. 99: 231-8. PMID 8967324 DOI: 10.1002/(Sici)1096-8644(199602)99:2<231::Aid-Ajpa1>3.0.Co;2-1 |
0.551 |
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| 1996 |
Petri B, von Haeseler A, Pääbo S. Extreme sequence heteroplasmy in bat mitochondrial DNA. Biological Chemistry. 377: 661-7. PMID 8922595 DOI: 10.1515/Bchm3.1996.377.10.661 |
0.423 |
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| 1996 |
Janke A, Gemmell NJ, Feldmaier-Fuchs G, Haeseler Av, Pääbo S. The mitochondrial genome of a monotreme - the platypus (Ornithrohynchus anatinus) Journal of Molecular Evolution. 42: 153-159. PMID 8919867 DOI: 10.1007/Bf02198841 |
0.437 |
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| 1996 |
Sajantila A, Salem AH, Savolainen P, Bauer K, Gierig C, Pääbo S. Paternal and maternal DNA lineages reveal a bottleneck in the founding of the Finnish population Proceedings of the National Academy of Sciences of the United States of America. 93: 12035-12039. PMID 8876258 DOI: 10.1073/Pnas.93.21.12035 |
0.36 |
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| 1996 |
Haeseler Av, Sajantila A, Pääbo S. The genetical archaeology of the human genome. Nature Genetics. 14: 135-140. PMID 8841181 DOI: 10.1038/Ng1096-135 |
0.493 |
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| 1996 |
Sajantila A, Lahermo P, Anttinen T, Lukka M, Sistonen P, Savontaus ML, Aula P, Beckman L, Tranebjaerg L, Gedde-Dahl T, Issel-Tarver L, DiRienzo A, Pääbo S. Genes and languages in Europe: an analysis of mitochondrial lineages. Genome Research. 5: 42-52. PMID 8717054 DOI: 10.1101/Gr.5.1.42 |
0.417 |
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| 1996 |
Armour JA, Anttinen T, May CA, Vega EE, Sajantila A, Kidd JR, Kidd KK, Bertranpetit J, Pääbo S, Jeffreys AJ. Minisatellite diversity supports a recent African origin for modern humans. Nature Genetics. 13: 154-60. PMID 8640220 DOI: 10.1038/Ng0696-154 |
0.352 |
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| 1996 |
Poinar HN, Höss M, Bada JL, Pääbo S. Amino acid racemization and the preservation of ancient DNA Science. 272: 864-866. PMID 8629020 DOI: 10.1126/Science.272.5263.864 |
0.342 |
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| 1996 |
Höss M, Jaruga P, Zastawny TH, Dizdaroglu M, Pääbo S. DNA damage and DNA sequence retrieval from ancient tissues. Nucleic Acids Research. 24: 1304-1307. PMID 8614634 DOI: 10.1093/Nar/24.7.1304 |
0.372 |
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| 1996 |
Hoss M, Dilling A, Currant A, Paabo S. Molecular phylogeny of the extinct ground sloth Mylodon darwinii Proceedings of the National Academy of Sciences of the United States of America. 93: 181-185. PMID 8552600 DOI: 10.1073/Pnas.93.1.181 |
0.431 |
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| 1996 |
Börner GV, Mörl M, Janke A, Pääbo S. RNA editing changes the identity of a mitochondrial tRNA in marsupials. The Embo Journal. 15: 5949-5957. DOI: 10.1002/J.1460-2075.1996.Tb00981.X |
0.312 |
|
| 1995 |
Comas D, Pääbo S, Bertranpetit J. Heteroplasmy in the Control Region of Human Mitochondrial DNA Genome Research. 5: 89-90. PMID 8717059 DOI: 10.1101/Gr.5.1.89 |
0.454 |
|
| 1995 |
Kohn M, Knauer F, Stoffella A, Schroder W, Paabo S. Conservation genetics of the European brown bear - A study using excremental PCR of nuclear and mitochondrial sequences Molecular Ecology. 4: 95-103. PMID 7711958 DOI: 10.1111/J.1365-294X.1995.Tb00196.X |
0.379 |
|
| 1995 |
Mörl M, Dörner M, Pääbo S. C to U editing and modifications during the maturation of the mitochondrial tRNAAsP in marsupials Nucleic Acids Research. 23: 3380-3384. PMID 7567446 DOI: 10.1093/Nar/23.17.3380 |
0.317 |
|
| 1995 |
Yokobori S, Pääbo S. Transfer RNA editing in land snail mitochondria Proceedings of the National Academy of Sciences of the United States of America. 92: 10432-10435. PMID 7479799 DOI: 10.1073/Pnas.92.22.10432 |
0.327 |
|
| 1995 |
Zischler H, Geisert H, von Haeseler A, Pääbo S. A nuclear 'fossil' of the mitochondrial D-loop and the origin of modern humans. Nature. 378: 489-92. PMID 7477404 DOI: 10.1038/378489A0 |
0.451 |
|
| 1995 |
Dörner M, Pääbo S. Nucleotide sequence of a marsupial LINE-1 element and the evolution of placental mammals. Molecular Biology and Evolution. 12: 944-948. PMID 7476141 DOI: 10.1093/Oxfordjournals.Molbev.A040272 |
0.355 |
|
| 1994 |
Bada JL, Wang XS, Poinar HN, Paabo S, Poinar GO. Amino acid racemization in amber-entombed insects: implications for DNA preservation. Geochimica Et Cosmochimica Acta. 58: 3131-5. PMID 11539553 DOI: 10.1016/0016-7037(94)90185-6 |
0.354 |
|
| 1994 |
Höss M, Pääbo S, Vereshchagin NK. Mammoth DNA sequences. Nature. 370: 333-333. PMID 8047135 DOI: 10.1038/370333A0 |
0.401 |
|
| 1994 |
Handt O, Höss M, Krings M, Pääbo S. Ancient DNA: methodological challenges. Cellular and Molecular Life Sciences. 50: 524-529. PMID 8020612 DOI: 10.1007/Bf01921720 |
0.358 |
|
| 1994 |
Gemmell NJ, Janke A, Western PS, Watson JM, Pääbo S, Graves JAM. Cloning and characterization of the platypus mitochondrial genome Journal of Molecular Evolution. 39: 200-205. PMID 7932783 DOI: 10.1007/Bf00163808 |
0.372 |
|
| 1994 |
Cao Y, Adachi J, Janke A, Pääbo S, Hasegawa M. Phylogenetic relationships among eutherian orders estimated from inferred sequences of mitochondrial proteins: Instability of a tree based on a single gene Journal of Molecular Evolution. 39: 519-527. PMID 7807540 DOI: 10.1007/Bf00173421 |
0.406 |
|
| 1993 |
Janke A, Pääbo S. Editing of a tRNA anticodon in marsupial mitochondria changes its codon recognition. Nucleic Acids Research. 21: 1523-1525. PMID 8479901 DOI: 10.1093/Nar/21.7.1523 |
0.349 |
|
| 1993 |
Goloubinoff P, Pääbo S, Wilson AC. Evolution of maize inferred from sequence diversity of an Adh2 gene segment from archaeological specimens. Proceedings of the National Academy of Sciences of the United States of America. 90: 1997-2001. PMID 8446621 DOI: 10.1073/Pnas.90.5.1997 |
0.605 |
|
| 1993 |
Thomas WK, Pääbo S. DNA sequences from old tissue remains. Methods in Enzymology. 224: 406-19. PMID 8264401 DOI: 10.1016/0076-6879(93)24031-O |
0.374 |
|
| 1993 |
Ward RH, Redd A, Valencia D, Frazier B, Pääbo S. Genetic and linguistic differentiation in the Americas. Proceedings of the National Academy of Sciences of the United States of America. 90: 10663-7. PMID 8248157 DOI: 10.1073/Pnas.90.22.10663 |
0.345 |
|
| 1992 |
Cooper A, Mourer-Chauviré C, Chambers GK, von Haeseler A, Wilson AC, Pääbo S. Independent origins of New Zealand moas and kiwis. Proceedings of the National Academy of Sciences of the United States of America. 89: 8741-4. PMID 1528888 DOI: 10.1073/Pnas.89.18.8741 |
0.563 |
|
| 1991 |
Pääbo S, Wilson AC. Miocene DNA sequences - a dream come true? Current Biology : Cb. 1: 45-6. PMID 15336206 DOI: 10.1016/0960-9822(91)90125-G |
0.578 |
|
| 1991 |
Pääbo S, Thomas WK, Whitfield KM, Kumazawa Y, Wilson AC. Rearrangements of mitochondrial transfer RNA genes in marsupials. Journal of Molecular Evolution. 33: 426-30. PMID 1720466 DOI: 10.1007/Bf02103134 |
0.606 |
|
| 1991 |
Welsh N, Pääbo S, Welsh M. Decreased mitochondrial gene expression in isolated islets of rats injected neonatally with streptozotocin Diabetologia. 34: 626-631. PMID 1720103 DOI: 10.1007/Bf00400991 |
0.324 |
|
| 1991 |
Sidow A, Wilson AC, Pääbo S. Bacterial DNA in Clarkia fossils. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences. 333: 429-32; discussion 4. PMID 1684053 DOI: 10.1098/Rstb.1991.0093 |
0.58 |
|
| 1991 |
Ward RH, Frazier BL, Dew-Jager K, Pääbo S. Extensive mitochondrial diversity within a single Amerindian tribe. Proceedings of the National Academy of Sciences of the United States of America. 88: 8720-4. PMID 1681540 DOI: 10.1073/Pnas.88.19.8720 |
0.406 |
|
| 1991 |
Pääbo S. Amplifying DNA from archeological remains: A meeting report Genome Research. 1: 107-110. DOI: 10.1101/Gr.1.2.107 |
0.344 |
|
| 1990 |
Pääbo S, Irwin DM, Wilson AC. DNA damage promotes jumping between templates during enzymatic amplification. The Journal of Biological Chemistry. 265: 4718-21. PMID 2307682 |
0.546 |
|
| 1990 |
Thomas WK, Pääbo S, Villablanca FX, Wilson AC. Spatial and temporal continuity of kangaroo rat populations shown by sequencing mitochondrial DNA from museum specimens. Journal of Molecular Evolution. 31: 101-12. PMID 2120448 DOI: 10.1007/Bf02109479 |
0.636 |
|
| 1990 |
Thomas RH, Pääbo S, Wilson AC. Chance marsupial relationships Nature. 345: 394-394. DOI: 10.1038/345394A0 |
0.475 |
|
| 1989 |
Pääbo S. Ancient DNA: extraction, characterization, molecular cloning, and enzymatic amplification. Proceedings of the National Academy of Sciences of the United States of America. 86: 1939-1943. PMID 2928314 DOI: 10.1073/Pnas.86.6.1939 |
0.411 |
|
| 1989 |
Kocher TD, Thomas WK, Meyer A, Edwards SV, Pääbo S, Villablanca FX, Wilson AC. Dynamics of mitochondrial DNA evolution in animals: amplification and sequencing with conserved primers. Proceedings of the National Academy of Sciences of the United States of America. 86: 6196-200. PMID 2762322 DOI: 10.1073/Pnas.86.16.6196 |
0.759 |
|
| 1989 |
Thomas RH, Schaffner W, Wilson AC, Pääbo S. DNA phylogeny of the extinct marsupial wolf. Nature. 340: 465-7. PMID 2755507 DOI: 10.1038/340465A0 |
0.627 |
|
| 1989 |
Pääbo S, Severinsson L, Andersson M, Martens I, Peterson PA, Nilsson T. Adenovirus proteins and MHC expression. Advances in Cancer Research. 52: 151-163. PMID 2662711 DOI: 10.1016/S0065-230X(08)60212-2 |
0.686 |
|
| 1989 |
Pääbo S, Higuchi RG, Wilson AC. Ancient DNA and the polymerase chain reaction. The emerging field of molecular archaeology. The Journal of Biological Chemistry. 264: 9709-12. PMID 2656708 |
0.49 |
|
| 1988 |
Pääbo S, Gifford JA, Wilson AC. Mitochondrial DNA sequences from a 7000-year old brain. Nucleic Acids Research. 16: 9775-87. PMID 3186445 DOI: 10.1093/Nar/16.20.9775 |
0.635 |
|
| 1988 |
Pääbo S, Wilson AC. Polymerase chain reaction reveals cloning artefacts. Nature. 334: 387-8. PMID 2841606 DOI: 10.1038/334387B0 |
0.508 |
|
| 1987 |
Pääbo S, Bhat BM, Wold WSM, Peterson PA. A short sequence in the COOH-terminus makes an adenovirus membrane glycoprotein a resident of the endoplasmic reticulum Cell. 50: 311-317. PMID 2954653 DOI: 10.1016/0092-8674(87)90226-1 |
0.689 |
|
| 1986 |
Pääbo S, Nilsson T, Peterson PA. Adenoviruses of subgenera B, C, D, and E modulate cell-surface expression of major histocompatibility complex class I antigens. Proceedings of the National Academy of Sciences of the United States of America. 83: 9665-9669. PMID 3467330 DOI: 10.1073/Pnas.83.24.9665 |
0.684 |
|
| 1986 |
Pääbo S, Weber F, Nilsson T, Schaffner W, Peterson PA. Structural and functional dissection of an MHC class I antigen-binding adenovirus glycoprotein. The Embo Journal. 5: 1921-7. PMID 3019670 DOI: 10.1002/j.1460-2075.1986.tb04445.x |
0.668 |
|
| 1986 |
Pääbo S. Molecular genetic investigations of ancient human remains. Cold Spring Harbor Symposia On Quantitative Biology. 51: 441-446. DOI: 10.1101/Sqb.1986.051.01.053 |
0.334 |
|
| 1985 |
Pääbo S. Molecular cloning of Ancient Egyptian mummy DNA Nature. 314: 644-645. PMID 3990798 DOI: 10.1038/314644A0 |
0.432 |
|
| 1985 |
Pääbo S, Kämpe O, Severinsson L, Andersson M, Fernandez C, Peterson PA. The association between class-I transplantation antigens and an adenovirus membrane protein. Progress in Allergy. 36: 114-34. PMID 3881778 |
0.65 |
|
| 1985 |
Andersson M, Pääbo S, Nilsson T, Peterson PA. Impaired intracellular transport of class I MHC antigens as a possible means for adenoviruses to evade immune surveillance Cell. 43: 215-222. PMID 2934137 DOI: 10.1016/0092-8674(85)90026-1 |
0.689 |
|
| 1985 |
Pääbo S, Kämpe O, Severinsson L, Andersson M, Fernandez C, Peterson PA. The Association between Class-I Transplantation Antigens and an Adenovirus Membrane Protein Progress in Allergy. 36: 114-134. DOI: 10.1159/000318419 |
0.332 |
|
| 1985 |
Pääbo S. Preservation of DNA in ancient Egyptian mummies Journal of Archaeological Science. 12: 411-417. DOI: 10.1016/0305-4403(85)90002-0 |
0.349 |
|
| 1983 |
Kämpe O, Bellgrau D, Hammerling U, Lind P, Pääbo S, Severinsson L, Peterson PA. Complex formation of class I transplantation antigens and a viral glycoprotein. The Journal of Biological Chemistry. 258: 10594-8. PMID 6885796 |
0.674 |
|
| 1983 |
Pääbo S, Weber F, Kämpe O, Schaffner W, Peterson PA. Association between transplantation antigens and a viral membrane protein synthesized from a mammalian expression vector. Cell. 33: 445-53. PMID 6305511 DOI: 10.1016/0092-8674(83)90426-9 |
0.711 |
|
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